Clone Name | FLbaf8l01 |
---|---|
Clone Library Name | barley_pub |
>emb|AM076484.1| Dasyatis akajei mRNA for CD9 antigen Length = 1269 Score = 48.1 bits (24), Expect = 0.086 Identities = 24/24 (100%) Strand = Plus / Minus Query: 531 ttgctttcatctttgtttgttacg 554 |||||||||||||||||||||||| Sbjct: 467 ttgctttcatctttgtttgttacg 444
>gb|AC103397.7| Mus musculus chromosome 8, clone RP24-439K22, complete sequence Length = 138810 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Plus Query: 20 cttcacttctcttctcttctccctctc 46 |||| |||||||||||||||||||||| Sbjct: 50795 cttctcttctcttctcttctccctctc 50821
>gb|AC166836.3| Mus musculus BAC clone RP23-17O23 from chromosome 10, complete sequence Length = 202804 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Plus Query: 20 cttcacttctcttctcttctccctctc 46 |||| |||||||||||||||||||||| Sbjct: 38260 cttctcttctcttctcttctccctctc 38286
>gb|AC093481.8| Mus musculus chromosome 18, clone RP23-62E19, complete sequence Length = 242587 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Plus Query: 20 cttcacttctcttctcttctccctctc 46 |||| |||||||||||||||||||||| Sbjct: 3806 cttctcttctcttctcttctccctctc 3832
>gb|AC166370.3| Mus musculus BAC clone RP23-20I24 from chromosome 9, complete sequence Length = 242229 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctctc 46 |||| |||||||||||||||||||||| Sbjct: 50685 cttctcttctcttctcttctccctctc 50659
>gb|AC122250.4| Mus musculus BAC clone RP23-167A3 from chromosome 19, complete sequence Length = 202060 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctctc 46 |||| |||||||||||||||||||||| Sbjct: 119480 cttctcttctcttctcttctccctctc 119454
>gb|AC122439.4| Mus musculus BAC clone RP24-222B4 from chromosome 3, complete sequence Length = 159703 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctctc 46 |||| |||||||||||||||||||||| Sbjct: 18938 cttctcttctcttctcttctccctctc 18912
>gb|AC122853.3| Mus musculus BAC clone RP23-175F18 from 7, complete sequence Length = 199264 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Plus Query: 20 cttcacttctcttctcttctccctctc 46 |||| |||||||||||||||||||||| Sbjct: 65059 cttctcttctcttctcttctccctctc 65085
>gb|AC149065.4| Mus musculus BAC clone RP23-121I6 from chromosome 7, complete sequence Length = 208092 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctctc 46 |||| |||||||||||||||||||||| Sbjct: 90716 cttctcttctcttctcttctccctctc 90690
>gb|AC159471.6| Mus musculus 6 BAC RP24-148O24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 159386 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctctc 46 |||| |||||||||||||||||||||| Sbjct: 67647 cttctcttctcttctcttctccctctc 67621
>gb|AC161454.3| Mus musculus BAC clone RP23-332F10 from chromosome 3, complete sequence Length = 228486 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctctc 46 |||| |||||||||||||||||||||| Sbjct: 34557 cttctcttctcttctcttctccctctc 34531
>gb|AC158233.2| Mus musculus BAC clone RP23-240E15 from chromosome 3, complete sequence Length = 209923 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Plus Query: 20 cttcacttctcttctcttctccctctc 46 |||| |||||||||||||||||||||| Sbjct: 9530 cttctcttctcttctcttctccctctc 9556
>gb|AC153651.4| Mus musculus BAC clone RP24-74B24 from chromosome 7, complete sequence Length = 256298 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Plus Query: 20 cttcacttctcttctcttctccctctc 46 |||| |||||||||||||||||||||| Sbjct: 228211 cttctcttctcttctcttctccctctc 228237
>gb|AC159741.2| Mus musculus BAC clone RP23-178B21 from chromosome 9, complete sequence Length = 185878 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctctc 46 |||| |||||||||||||||||||||| Sbjct: 139455 cttctcttctcttctcttctccctctc 139429
>gb|AC151052.4| Mus musculus BAC clone RP24-72K12 from chromosome 7, complete sequence Length = 216989 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctctc 46 |||| |||||||||||||||||||||| Sbjct: 179423 cttctcttctcttctcttctccctctc 179397
>gb|AC139665.7| Homo sapiens 3 BAC RP11-171J7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 68343 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Plus Query: 20 cttcacttctcttctcttctccctctc 46 |||| |||||||||||||||||||||| Sbjct: 37611 cttctcttctcttctcttctccctctc 37637
>emb|BX936296.17| Mouse DNA sequence from clone RP23-27J1 on chromosome 2, complete sequence Length = 188273 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctctc 46 |||| |||||||||||||||||||||| Sbjct: 18610 cttctcttctcttctcttctccctctc 18584
>emb|BX119996.7| Mouse DNA sequence from clone RP23-352G15 on chromosome X, complete sequence Length = 191635 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Plus Query: 20 cttcacttctcttctcttctccctctc 46 |||| |||||||||||||||||||||| Sbjct: 29171 cttctcttctcttctcttctccctctc 29197
>gb|AC157908.5| Mus musculus chromosome 18, clone RP24-286P2, complete sequence Length = 161561 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctctc 46 |||| |||||||||||||||||||||| Sbjct: 129856 cttctcttctcttctcttctccctctc 129830
>emb|AL606914.9| Mouse DNA sequence from clone RP23-169H13 on chromosome 4, complete sequence Length = 197061 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctctc 46 |||| |||||||||||||||||||||| Sbjct: 113782 cttctcttctcttctcttctccctctc 113756
>emb|AL589696.10| Mouse DNA sequence from clone RP23-454M13 on chromosome 15, complete sequence Length = 207431 Score = 46.1 bits (23), Expect = 0.34 Identities = 26/27 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctctc 46 |||| |||||||||||||||||||||| Sbjct: 4224 cttctcttctcttctcttctccctctc 4198
>gb|AC153977.4| Mus musculus 10 BAC RP24-270K22 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 163035 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 24 acttctcttctcttctccctct 45 |||||||||||||||||||||| Sbjct: 132480 acttctcttctcttctccctct 132459
>gb|AC123728.8| Mus musculus chromosome 3, clone RP23-453L19, complete sequence Length = 161887 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 411 tatcctaattgctgattgctga 432 |||||||||||||||||||||| Sbjct: 152126 tatcctaattgctgattgctga 152147
>gb|AC024957.9| Mus musculus chromosome 16, clone RP23-178A24, complete sequence Length = 229563 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 acttcacttctcttctcttctc 40 |||||||||||||||||||||| Sbjct: 225605 acttcacttctcttctcttctc 225626
>gb|AC134786.6| Mus musculus chromosome 15, clone RP24-502A14, complete sequence Length = 179157 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 acttcacttctcttctcttctc 40 |||||||||||||||||||||| Sbjct: 54726 acttcacttctcttctcttctc 54747
>gb|AC131178.11| Mus musculus chromosome 15, clone RP23-376I10, complete sequence Length = 170753 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 acttcacttctcttctcttctc 40 |||||||||||||||||||||| Sbjct: 133605 acttcacttctcttctcttctc 133584
>gb|AC116326.5| Mus musculus BAC clone RP24-64C6 from chromosome 7, complete sequence Length = 181548 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 acttcacttctcttctcttctc 40 |||||||||||||||||||||| Sbjct: 123357 acttcacttctcttctcttctc 123336
>gb|AC133498.2| Mus musculus BAC clone RP24-241K8 from chromosome 13, complete sequence Length = 159112 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctct 45 |||| ||||||||||||||||||||| Sbjct: 40787 cttctcttctcttctcttctccctct 40762
>gb|AC004910.2| Homo sapiens PAC clone RP5-859M6 from 7, complete sequence Length = 102703 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 acttcacttctcttctcttctc 40 |||||||||||||||||||||| Sbjct: 13781 acttcacttctcttctcttctc 13760
>gb|AC162303.4| Mus musculus chromosome 15, clone RP23-475N20, complete sequence Length = 181487 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 acttcacttctcttctcttctc 40 |||||||||||||||||||||| Sbjct: 151073 acttcacttctcttctcttctc 151094
>emb|CR855332.7| Zebrafish DNA sequence from clone DKEY-31M14 in linkage group 15, complete sequence Length = 212455 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 743 aaaattctgcagtttttgcttt 764 |||||||||||||||||||||| Sbjct: 9468 aaaattctgcagtttttgcttt 9489
>gb|AC151837.4| Mus musculus BAC clone RP23-330A14 from chromosome 7, complete sequence Length = 209661 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 acttcacttctcttctcttctc 40 |||||||||||||||||||||| Sbjct: 172931 acttcacttctcttctcttctc 172910
>emb|BX255277.5| Mouse DNA sequence from clone RP23-478B14 on chromosome 11, complete sequence Length = 169765 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 15 tttgacttcacttctcttctcttctc 40 ||||||||| |||||||||||||||| Sbjct: 2280 tttgacttctcttctcttctcttctc 2255
>emb|AL713960.17| Mouse DNA sequence from clone RP23-448I9 on chromosome 11 Contains the 5' end of the Car10 gene for carbonic anhydrase 10 and one CpG island, complete sequence Length = 203449 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 acttcacttctcttctcttctc 40 |||||||||||||||||||||| Sbjct: 15658 acttcacttctcttctcttctc 15637
>gb|AC157813.6| Mus musculus chromosome 1, clone RP24-70I14, complete sequence Length = 177317 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctct 45 |||| ||||||||||||||||||||| Sbjct: 168851 cttctcttctcttctcttctccctct 168826
>gb|AC153635.4| Mus musculus 6 BAC RP23-392I2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 189373 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 acttcacttctcttctcttctc 40 |||||||||||||||||||||| Sbjct: 131174 acttcacttctcttctcttctc 131153
>gb|AC106841.11| Mus musculus chromosome 1, clone RP24-554B1, complete sequence Length = 165972 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctct 45 |||| ||||||||||||||||||||| Sbjct: 33853 cttctcttctcttctcttctccctct 33828
>emb|CT009632.14| Mouse DNA sequence from clone RP23-5G10 on chromosome 16, complete sequence Length = 208600 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 acttcacttctcttctcttctc 40 |||||||||||||||||||||| Sbjct: 181772 acttcacttctcttctcttctc 181793
>gb|AC140356.3| Mus musculus BAC clone RP23-216B19 from 6, complete sequence Length = 211504 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 15 tttgacttcacttctcttctcttctc 40 ||||||||||| |||||||||||||| Sbjct: 43060 tttgacttcacatctcttctcttctc 43035
>emb|AL929158.8| Mouse DNA sequence from clone RP23-92O15 on chromosome 2, complete sequence Length = 125262 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 24 acttctcttctcttctccctct 45 |||||||||||||||||||||| Sbjct: 120882 acttctcttctcttctccctct 120861
>emb|AL645600.11| Mouse DNA sequence from clone RP23-396N4 on chromosome 11, complete sequence Length = 180286 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 acttcacttctcttctcttctc 40 |||||||||||||||||||||| Sbjct: 37252 acttcacttctcttctcttctc 37273 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 20 cttcacttctcttctcttctccctc 44 |||| |||||||||||||||||||| Sbjct: 51523 cttctcttctcttctcttctccctc 51547
>gb|AC115888.10| Mus musculus chromosome 3, clone RP24-399D16, complete sequence Length = 142265 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 411 tatcctaattgctgattgctga 432 |||||||||||||||||||||| Sbjct: 112188 tatcctaattgctgattgctga 112167
>gb|AC175380.2| Mus musculus BAC clone RP24-333L5 from chromosome 13, complete sequence Length = 164055 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctc 40 ||||||||||||||||||||| Sbjct: 88891 cttcacttctcttctcttctc 88871
>gb|AC167012.3| Mus musculus BAC clone RP23-416A5 from chromosome 13, complete sequence Length = 193916 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctc 44 |||| |||||||||||||||||||| Sbjct: 184015 cttctcttctcttctcttctccctc 183991
>gb|AC124637.10| Mus musculus chromosome 15, clone RP23-458B6, complete sequence Length = 200607 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctc 44 |||| |||||||||||||||||||| Sbjct: 175899 cttctcttctcttctcttctccctc 175875
>gb|AC101982.9| Mus musculus chromosome 3, clone RP24-346F13, complete sequence Length = 162227 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctc 44 |||| |||||||||||||||||||| Sbjct: 159878 cttctcttctcttctcttctccctc 159854
>gb|AC110816.7| Mus musculus BAC clone RP23-20P15 from chromosome 12, complete sequence Length = 216095 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 523 cagttcgtttgctttcatctttgtttgtt 551 |||||||||||||||| | |||||||||| Sbjct: 106642 cagttcgtttgctttcttgtttgtttgtt 106614
>gb|AC161217.7| Mus musculus chromosome 8, clone RP23-80D9, complete sequence Length = 234127 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctc 44 |||| |||||||||||||||||||| Sbjct: 171167 cttctcttctcttctcttctccctc 171143
>gb|AC124435.5| Mus musculus BAC clone RP24-252A5 from chromosome 10, complete sequence Length = 160184 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctc 44 |||| |||||||||||||||||||| Sbjct: 14460 cttctcttctcttctcttctccctc 14436
>gb|AC113011.9| Mus musculus chromosome 16, clone RP23-173D22, complete sequence Length = 210962 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 cttcacttctcttctcttctc 40 ||||||||||||||||||||| Sbjct: 42394 cttcacttctcttctcttctc 42414
>gb|AC122414.4| Mus musculus BAC clone RP24-150D8 from chromosome 5, complete sequence Length = 186986 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctc 44 |||| |||||||||||||||||||| Sbjct: 135378 cttctcttctcttctcttctccctc 135354
>gb|AC096625.25| Mus musculus strain C57BL/6J clone rp23-388i7 map 1, complete sequence Length = 191415 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 16 ttgacttcacttctcttctcttctc 40 |||||||| |||||||||||||||| Sbjct: 134942 ttgacttctcttctcttctcttctc 134966
>gb|AC126048.3| Mus musculus BAC clone RP23-207O12 from 3, complete sequence Length = 188665 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 cttcacttctcttctcttctc 40 ||||||||||||||||||||| Sbjct: 113451 cttcacttctcttctcttctc 113471
>gb|AC113064.8| Mus musculus chromosome 5, clone RP23-262H7, complete sequence Length = 176176 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 cttcacttctcttctcttctc 40 ||||||||||||||||||||| Sbjct: 15086 cttcacttctcttctcttctc 15106
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 cttctcttctcttctccctct 45 ||||||||||||||||||||| Sbjct: 1031358 cttctcttctcttctccctct 1031378
>gb|AC091563.9| Homo sapiens chromosome 8, clone RP11-760H22, complete sequence Length = 204896 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 658 attcaaggtgattcagtaatgttct 682 |||||||||||||| |||||||||| Sbjct: 8496 attcaaggtgattctgtaatgttct 8472
>ref|NM_069219.3| Caenorhabditis elegans Y11D7A.14 (Y11D7A.14) mRNA, complete cds Length = 4489 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1082 atctttttgaatattcaagta 1102 ||||||||||||||||||||| Sbjct: 2343 atctttttgaatattcaagta 2323
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16, complete sequence Length = 179157 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 acttcacttctcttctcttct 39 ||||||||||||||||||||| Sbjct: 38935 acttcacttctcttctcttct 38955
>gb|AC112505.5| Homo sapiens 3 BAC RP11-282M5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 55860 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 742 taaaattctgcagtttttgcttttc 766 ||||||||| ||||||||||||||| Sbjct: 28977 taaaattcttcagtttttgcttttc 29001
>gb|AC092540.4| Homo sapiens BAC clone RP11-190E23 from 4, complete sequence Length = 133801 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ttgacttcacttctcttctct 36 ||||||||||||||||||||| Sbjct: 78614 ttgacttcacttctcttctct 78594
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 acttcacttctcttctcttct 39 ||||||||||||||||||||| Sbjct: 16160046 acttcacttctcttctcttct 16160066
>emb|BX957253.12| Zebrafish DNA sequence from clone DKEY-234L14 in linkage group 7, complete sequence Length = 197310 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctc 40 ||||||||||||||||||||| Sbjct: 145365 cttcacttctcttctcttctc 145345
>gb|AC162805.2| Mus musculus BAC clone RP23-109O16 from chromosome 17, complete sequence Length = 183193 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 cttcacttctcttctcttctc 40 ||||||||||||||||||||| Sbjct: 103247 cttcacttctcttctcttctc 103267
>gb|AC154358.2| Mus musculus BAC clone RP23-173M16 from chromosome 13, complete sequence Length = 193594 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctc 44 |||| |||||||||||||||||||| Sbjct: 37300 cttctcttctcttctcttctccctc 37276
>gb|AC002308.1| Homo sapiens Chromosome 22q11.2 BAC Clone 1000e4 In IGLC Region, complete sequence Length = 151111 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 cttcacttctcttctcttctc 40 ||||||||||||||||||||| Sbjct: 129133 cttcacttctcttctcttctc 129153
>emb|AL645764.15| Mouse DNA sequence from clone RP23-290B5 on chromosome 11 Contains the 5' end of the gene for a novel protein (9330163N21Rik), a ribosomal protein S2 (Rps2) pseudogene, the gene for a novel protein (E130018012Rik), the gene for a novel protein (6820428D13Rik), the Mrpl27 gene for mitochondrial ribosomal protein L27, the Xylt2 gene for xylosyltransferase II, a novel gene (5330426M11Rik), the gene for a novel protein (C230057C09Rik), the gene for a novel protein similar to Cdc34 and two pseudogenes similar to hypothetical protein Tr:Q8C517, complete sequence Length = 203262 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 20 cttcacttctcttctcttctccctc 44 |||| |||||||||||||||||||| Sbjct: 132385 cttctcttctcttctcttctccctc 132409
>emb|AL645636.22| Mouse DNA sequence from clone RP23-337B10 on chromosome 11 Contains the 5' end of the gene for a novel protein similar to Tensin Tns and a CpG island, complete sequence Length = 128681 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 16 ttgacttcacttctcttctcttctc 40 |||||||| |||||||||||||||| Sbjct: 122996 ttgacttctcttctcttctcttctc 123020
>emb|AL645970.15| Mouse DNA sequence from clone DN-258M5 on chromosome 3, complete sequence Length = 141160 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 cttcacttctcttctcttctc 40 ||||||||||||||||||||| Sbjct: 21004 cttcacttctcttctcttctc 21024
>emb|BX927187.7| Zebrafish DNA sequence from clone DKEY-44L17 in linkage group 19, complete sequence Length = 127280 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 20 cttcacttctcttctcttctccctc 44 |||| |||||||||||||||||||| Sbjct: 97584 cttctcttctcttctcttctccctc 97608
>gb|AC167565.1| Mus musculus BAC clone RP24-84D8 from chromosome 14, complete sequence Length = 199101 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 cttctcttctcttctccctct 45 ||||||||||||||||||||| Sbjct: 60621 cttctcttctcttctccctct 60641
>gb|AC112482.4| Homo sapiens 3 BAC RP11-305F5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 182916 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 748 tctgcagtttttgcttttcat 768 ||||||||||||||||||||| Sbjct: 115355 tctgcagtttttgcttttcat 115375
>gb|AC090963.32| Mus musculus strain C57BL/6J chromosome 17 clone rp23-435j12, complete sequence Length = 218107 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 20 cttcacttctcttctcttctccctc 44 |||| |||||||||||||||||||| Sbjct: 97722 cttctcttctcttctcttctccctc 97746
>gb|AC096565.1| Homo sapiens BAC clone RP11-287O8 from 2, complete sequence Length = 172515 Score = 42.1 bits (21), Expect = 5.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1065 agtttgcttttgaagtgatctttttgaat 1093 ||||| ||||||||| ||||||||||||| Sbjct: 63406 agttttcttttgaagagatctttttgaat 63434
>gb|AC090653.36| Mus musculus strain C57BL/6J chromosome 17 clone rp23-260k1, complete sequence Length = 191844 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctc 44 |||| |||||||||||||||||||| Sbjct: 184920 cttctcttctcttctcttctccctc 184896
>gb|AC159896.3| Mus musculus BAC clone RP23-265F16 from chromosome 9, complete sequence Length = 198120 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 ttctcttctcttctccctctc 46 ||||||||||||||||||||| Sbjct: 56425 ttctcttctcttctccctctc 56445
>dbj|AP005624.3| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1367F12, complete sequence Length = 117520 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 658 attcaaggtgattcagtaatgttct 682 |||||||||||||| |||||||||| Sbjct: 32595 attcaaggtgattctgtaatgttct 32571
>dbj|AP005717.3| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1471A8, complete sequence Length = 169835 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 658 attcaaggtgattcagtaatgttct 682 |||||||||||||| |||||||||| Sbjct: 150606 attcaaggtgattctgtaatgttct 150582
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 951 aggtaatcctttaatggttag 971 ||||||||||||||||||||| Sbjct: 4413858 aggtaatcctttaatggttag 4413878
>emb|AL032632.1|CEY11D7A Caenorhabditis elegans YAC Y11D7A, complete sequence Length = 57337 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1082 atctttttgaatattcaagta 1102 ||||||||||||||||||||| Sbjct: 52409 atctttttgaatattcaagta 52389
>gb|AC159261.4| Mus musculus BAC clone RP24-80C13 from chromosome 13, complete sequence Length = 230437 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctc 44 |||| |||||||||||||||||||| Sbjct: 155721 cttctcttctcttctcttctccctc 155697
>emb|AL844840.8| Mouse DNA sequence from clone RP23-337P9 on chromosome 2, complete sequence Length = 219568 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 cttcacttctcttctcttctc 40 ||||||||||||||||||||| Sbjct: 25063 cttcacttctcttctcttctc 25083
>emb|CT025617.12| Mouse DNA sequence from clone RP23-442A13 on chromosome 9, complete sequence Length = 193308 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 ttctcttctcttctccctctc 46 ||||||||||||||||||||| Sbjct: 30160 ttctcttctcttctccctctc 30140
>emb|AL929017.9| Zebrafish DNA sequence from clone DKEY-4C15 in linkage group 20, complete sequence Length = 208922 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1174 agatgctgattactgtgttgg 1194 ||||||||||||||||||||| Sbjct: 24779 agatgctgattactgtgttgg 24759
>emb|AL163217.2|HS21C017 Homo sapiens chromosome 21 segment HS21C017 Length = 340000 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 530 tttgctttcatctttgtttgt 550 ||||||||||||||||||||| Sbjct: 164667 tttgctttcatctttgtttgt 164647
>emb|AL683814.10| Mouse DNA sequence from clone RP23-165L23 on chromosome 2, complete sequence Length = 191052 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctc 40 ||||||||||||||||||||| Sbjct: 15789 cttcacttctcttctcttctc 15769
>emb|AL672194.1| Mouse DNA sequence from clone RP23-73P3 on chromosome 13, complete sequence Length = 173598 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctccctc 44 |||| |||||||||||||||||||| Sbjct: 116705 cttctcttctcttctcttctccctc 116681
>emb|AL669976.11| Mouse DNA sequence from clone RP23-15J3 on chromosome X, complete sequence Length = 227762 Score = 42.1 bits (21), Expect = 5.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 20 cttcacttctcttctcttctccctc 44 |||| |||||||||||||||||||| Sbjct: 208617 cttctcttctcttctcttctccctc 208641
>emb|AL078474.2| Homo sapiens chromosome 21 PAC RPCIP704H2137, complete sequence Length = 131184 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 530 tttgctttcatctttgtttgt 550 ||||||||||||||||||||| Sbjct: 123614 tttgctttcatctttgtttgt 123634
>dbj|AP004218.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1198A1 Length = 195623 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 cttcacttctcttctcttctc 40 ||||||||||||||||||||| Sbjct: 123538 cttcacttctcttctcttctc 123518
>dbj|D87007.1| Homo sapiens immunoglobulin lambda gene locus DNA, clone:48A11 Length = 37302 Score = 42.1 bits (21), Expect = 5.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 cttcacttctcttctcttctc 40 ||||||||||||||||||||| Sbjct: 30077 cttcacttctcttctcttctc 30097 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 267,056,511 Number of extensions: 14872907 Number of successful extensions: 370579 Number of sequences better than 10.0: 90 Number of HSP's gapped: 370576 Number of HSP's successfully gapped: 91 Length of query: 1393 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1370 Effective length of database: 18,503,978,556 Effective search space: 25350450621720 Effective search space used: 25350450621720 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)