ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf8k19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK102092:Os12g0140300 30 2.9

>AK102092:Os12g0140300 |
          Length = 639
 Score = 29.6 bits (65), Expect = 2.9
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +2

Query: 590 FDFKKMHFAD-SACEFECRSLFYLVLRCCNVHRLVTG 697
           FD  K+H  D S C+F+   L + V  C N+  L  G
Sbjct: 379 FDLSKLHLLDFSYCKFDTEHLLHFVEACPNIRELHLG 415


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 13,295,103
Number of extensions: 228109
Number of successful extensions: 603
Number of sequences better than 10.0: 1
Number of HSP's gapped: 603
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 15,399,855
Length adjustment: 100
Effective length of query: 192
Effective length of database: 11,395,755
Effective search space: 2187984960
Effective search space used: 2187984960
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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