Clone Name | FLbaf8k14 |
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Clone Library Name | barley_pub |
>ref|NM_001048741.1| Oryza sativa (japonica cultivar-group) Os01g0180300 (Os01g0180300) mRNA, complete cds Length = 2714 Score = 551 bits (278), Expect = e-153 Identities = 767/930 (82%) Strand = Plus / Plus Query: 1300 aaagatgatctgatcaaacaactggaagaaaagctctctgttgcactaagtgcctctagc 1359 |||||| || |||||||||| || || | ||| ||||||| |||| |||||| |||||| Sbjct: 1370 aaagataatatgatcaaacagcttgatggaaaactctctgatgcattaagtgattctagc 1429 Query: 1360 aaagaccatgaagtcattgccgagttgaacaaggaattggattccaccaaagcaatgtta 1419 ||||||| ||| ||| || | | ||||||||||||||||| | || ||||||||| || Sbjct: 1430 aaagaccgtgagaacatcgctgcgctgaacaaggaattggatgcaacaaaagcaatgcta 1489 Query: 1420 gacgatgaagttgcggcactgaaaagtcttagagatctacttaaatccactgaagagacc 1479 || |||||||||| ||| | |||||| | ||||| |||| ||||||| || ||| | Sbjct: 1490 gagaatgaagttgctgcagttaaaagtttaagagaatcacttcaatccacagaggaggca 1549 Query: 1480 ctaagtgattcccgaactgaggtttccaaactttccgaggaccttgatgaagcaaataga 1539 || | |||||| ||| |||||| ||||||||||| | ||| |||||||||||||||||| Sbjct: 1550 ctgacagattccagaagtgaggtatccaaactttcagtggaacttgatgaagcaaataga 1609 Query: 1540 atgaacaaggacctgtcattgcagatttcaaatctccaaagcgagttcaatgaaatgcaa 1599 |||||| |||||||| |||| ||||| || ||||| |||||||||||||||||| Sbjct: 1610 atgaaccaggacctggtgctgcaaatttctaaactccaggatgagttcaatgaaatgcaa 1669 Query: 1600 gaaggtctgacttacaagcttggagaggctgaatcagtatgtaaagctctatcagatgaa 1659 || || || ||| |||| || ||||||| |||||||||| ||||||||| ||||| ||| Sbjct: 1670 gagggccttactaacaaactaggagaggtagaatcagtatctaaagctctgtcagacgaa 1729 Query: 1660 gtggtgtcagctaaagagatggttcaaaagggacaggaagaacttgaagctacctctaat 1719 | || || | ||| ||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 1730 cttgtctctgttaaggagatggttcacaagggacaggaagaacttgaagccacttctaat 1789 Query: 1720 gggcttgcttctgctgtggaagctcgtgataacctgaagaaagaattgctggatgtgtac 1779 | |||||| || ||||||||||||||| |||||||||||||||||||| ||||||| | Sbjct: 1790 gagcttgcatccattgtggaagctcgtgacaacctgaagaaagaattgctcgatgtgttc 1849 Query: 1780 aagaaatttgaatccaccacacaggagcttgttgatgaaaggagagttgtgactactttg 1839 ||||| || |||||||| |||||||||||||||||||||||| | ||| ||||||||| Sbjct: 1850 aagaagttggaatccacgtcacaggagcttgttgatgaaaggaaaactgtcactactttg 1909 Query: 1840 aatagggagcttgaggctttggccaaacaattgaatgcagattctcaagcacgaaaagta 1899 |||||||||||||||||||||| |||||| | | |||||| |||||||||||| Sbjct: 1910 aatagggagcttgaggctttggtgaaacaactacagatggattctgaagcacgaaaagct 1969 Query: 1900 ctcgaagcagacctggatgaagcaaccagatcactggacgagatgaacacgagtgcactg 1959 || ||||||||||||||||||||||| | ||||| ||||||||||||| ||||||| | Sbjct: 1970 cttgaagcagacctggatgaagcaacaaagtcactagacgagatgaacaggagtgcatta 2029 Query: 1960 tcactatctaaggcgctagagagcactcattccaagaatgccactcttgaggcagagaaa 2019 |||||||| |||| ||||||| ||| |||| | ||| | ||||||||| ||||||||| Sbjct: 2030 tcactatcaaaggagctagaggaaactaattctaggaaggacactcttgaagcagagaaa 2089 Query: 2020 gaaatgctatcaaaagctctcgatgaacaaacaaaactgacaaccgaggctcaagagaac 2079 ||||| ||||||| ||||| | ||| ||| || | ||||| || ||||| || ||| Sbjct: 2090 aaaatgttatcaaaggctcttgctgagcaacagaagatcacaactgaagctcatgaaaac 2149 Query: 2080 tgcgaggatgctcagaatcttatcacgaggcttcagacagaaagggagacttttgaaatg 2139 ||||||||||||||||||||| | ||||||||||| || | ||||| |||||||||| Sbjct: 2150 actgaggatgctcagaatcttatctctaggcttcagactgagaaggagagttttgaaatg 2209 Query: 2140 aggtctaggcacctcgaagaggaactggcgttagcgaagggtgagatgttgcgtctaaga 2199 ||| |||| || || |||||||| |||||||||| ||||||||||| ||||| |||||| Sbjct: 2210 agggctagacatcttgaagaggagttggcgttagcaaagggtgagatattgcgcctaaga 2269 Query: 2200 aggcagattagtgcaagcaaatcccagaaa 2229 |||||||||||| |||||| ||| |||||| Sbjct: 2270 aggcagattagtacaagcagatcacagaaa 2299 Score = 545 bits (275), Expect = e-151 Identities = 656/783 (83%) Strand = Plus / Plus Query: 480 gcaaaaacaatctccagggaatccacttgctggccttctgaatgcaattgcagttattgc 539 |||| ||||| |||| |||||||||||| |||| ||| ||||||||||||||||| ||| Sbjct: 550 gcaagaacaaactcctgggaatccactttctggtcttttgaatgcaattgcagttgctgc 609 Query: 540 ctcaggcgttcttgctggattgtatggtacatctcaacaggaaaagaaggccctgcaatc 599 ||| || |||||||||||| ||||||| || |||||||||||||||||||||||| |||| Sbjct: 610 ctccggtgttcttgctggactgtatggcacttctcaacaggaaaagaaggccctggaatc 669 Query: 600 tgtcgtctcatctttggaggtcaaattggctgaaaatgaggcagcaatctcatcgatgag 659 |||||||||||| ||||| |||| ||||||||||||||||||||||||||| |||||| Sbjct: 670 cgtcgtctcatctatggagagcaaactggctgaaaatgaggcagcaatctcattgatgag 729 Query: 660 ggagacatatgaaaaaaggttattagagcagcaagcggcacaaaagaagcaatctatgaa 719 ||| | || || ||||| || | || || ||| | ||||||||||||||| | ||||| Sbjct: 730 ggaaaactacgagaaaagattgctggatcaacaaacagcacaaaagaagcaagcaatgaa 789 Query: 720 gttccaggagcaggaagcttcattgctagatcaattgtcttcaacaaaaaagactgtaac 779 ||| |||||||||||||| || | ||||||| |||||||||||||||||||| ||||| Sbjct: 790 gtttcaggagcaggaagcctctcttttagatcagttgtcttcaacaaaaaagacggtaac 849 Query: 780 atcactaagtgaagatttcagaagggagaaggcacgggctgaggagctcaaggatgaaat 839 || ||||||||||| ||||||||||||||| ||| |||||||||||| | ||| ||||| Sbjct: 850 ttcgctaagtgaagaattcagaagggagaagacactggctgaggagcttagggaagaaat 909 Query: 840 acggcgattagaaagtagtattgataaagctgggaatgataaagaagtgcttgaagccca 899 ||| ||| |||| || ||| ||| |||||||| |||| ||||| || ||||||||| | Sbjct: 910 acgtcgactagagagcagtcttgcacaagctggggatgacaaagatgttcttgaagccaa 969 Query: 900 actgacagaaaagtttggtgaaatgagtgatttggaggaaaaattaagtcttctcagcca 959 ||||| |||||||| ||||| | | |||| |||||||| ||||| | || ||||| Sbjct: 970 actgaaggaaaagttgggtgatgtcaacattttgcaggaaaaagtaagtttgcttagcca 1029 Query: 960 acagaatgatagtaaggagaaacgcatcgaggaactcaactcatcactttcttcaaagga 1019 | | | ||||| ||||| | ||||||| |||||||| |||| |||||| |||||||| Sbjct: 1030 agaaattgataataagggtatacgcatcagggaactcagttcattactttcgtcaaagga 1089 Query: 1020 agcagagtaccagaacctgcgccgtttctctcatcaaactaaagagagtcttgaatttgc 1079 |||||| |||| || ||| || ||||||| | ||||||||||||||||| ||| |||| Sbjct: 1090 agcagactaccgtaatctgtgctctttctctgaccaaactaaagagagtctagaacttgc 1149 Query: 1080 aaatgctaaaatacaacagctggaggaagagattcatacaactaaaaatgatcttgcttc 1139 | | ||||||||||| || |||||||||||| |||||| ||||| |||||||||| |||| Sbjct: 1150 agaagctaaaatacagcaactggaggaagaggttcatagaactagaaatgatctttcttc 1209 Query: 1140 taagatatcttcaattgactcactgaatgagaaacttcaagcattaaactctgcaaagaa 1199 |||||||||||||||||| | |||||||||| ||||||||||| | |||||||||||||| Sbjct: 1210 taagatatcttcaattgatttactgaatgaggaacttcaagcactgaactctgcaaagaa 1269 Query: 1200 ggaagctgatgaaaaaataaatgagctaatcaaagagtgtacagacttgaaggcttcttc 1259 |||||||| ||||| ||| |||| ||| ||||| | ||||||| ||||||||||||| Sbjct: 1270 tgaagctgaggaaaagctaagtgagttaacaaaagattatacagacctgaaggcttcttc 1329 Query: 1260 tga 1262 ||| Sbjct: 1330 tga 1332 Score = 69.9 bits (35), Expect = 5e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 210 gtacgcgctggcgcgccgggccgtgctcctcggggtctccgcgctgccgctcctccgcg 268 ||||| ||||||||| |||| |||||||||||| ||||| ||||| ||||||||||||| Sbjct: 328 gtacgtgctggcgcggcggggcgtgctcctcggcgtctcggcgctcccgctcctccgcg 386
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 551 bits (278), Expect = e-153 Identities = 767/930 (82%) Strand = Plus / Minus Query: 1300 aaagatgatctgatcaaacaactggaagaaaagctctctgttgcactaagtgcctctagc 1359 |||||| || |||||||||| || || | ||| ||||||| |||| |||||| |||||| Sbjct: 4208900 aaagataatatgatcaaacagcttgatggaaaactctctgatgcattaagtgattctagc 4208841 Query: 1360 aaagaccatgaagtcattgccgagttgaacaaggaattggattccaccaaagcaatgtta 1419 ||||||| ||| ||| || | | ||||||||||||||||| | || ||||||||| || Sbjct: 4208840 aaagaccgtgagaacatcgctgcgctgaacaaggaattggatgcaacaaaagcaatgcta 4208781 Query: 1420 gacgatgaagttgcggcactgaaaagtcttagagatctacttaaatccactgaagagacc 1479 || |||||||||| ||| | |||||| | ||||| |||| ||||||| || ||| | Sbjct: 4208780 gagaatgaagttgctgcagttaaaagtttaagagaatcacttcaatccacagaggaggca 4208721 Query: 1480 ctaagtgattcccgaactgaggtttccaaactttccgaggaccttgatgaagcaaataga 1539 || | |||||| ||| |||||| ||||||||||| | ||| |||||||||||||||||| Sbjct: 4208720 ctgacagattccagaagtgaggtatccaaactttcagtggaacttgatgaagcaaataga 4208661 Query: 1540 atgaacaaggacctgtcattgcagatttcaaatctccaaagcgagttcaatgaaatgcaa 1599 |||||| |||||||| |||| ||||| || ||||| |||||||||||||||||| Sbjct: 4208660 atgaaccaggacctggtgctgcaaatttctaaactccaggatgagttcaatgaaatgcaa 4208601 Query: 1600 gaaggtctgacttacaagcttggagaggctgaatcagtatgtaaagctctatcagatgaa 1659 || || || ||| |||| || ||||||| |||||||||| ||||||||| ||||| ||| Sbjct: 4208600 gagggccttactaacaaactaggagaggtagaatcagtatctaaagctctgtcagacgaa 4208541 Query: 1660 gtggtgtcagctaaagagatggttcaaaagggacaggaagaacttgaagctacctctaat 1719 | || || | ||| ||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 4208540 cttgtctctgttaaggagatggttcacaagggacaggaagaacttgaagccacttctaat 4208481 Query: 1720 gggcttgcttctgctgtggaagctcgtgataacctgaagaaagaattgctggatgtgtac 1779 | |||||| || ||||||||||||||| |||||||||||||||||||| ||||||| | Sbjct: 4208480 gagcttgcatccattgtggaagctcgtgacaacctgaagaaagaattgctcgatgtgttc 4208421 Query: 1780 aagaaatttgaatccaccacacaggagcttgttgatgaaaggagagttgtgactactttg 1839 ||||| || |||||||| |||||||||||||||||||||||| | ||| ||||||||| Sbjct: 4208420 aagaagttggaatccacgtcacaggagcttgttgatgaaaggaaaactgtcactactttg 4208361 Query: 1840 aatagggagcttgaggctttggccaaacaattgaatgcagattctcaagcacgaaaagta 1899 |||||||||||||||||||||| |||||| | | |||||| |||||||||||| Sbjct: 4208360 aatagggagcttgaggctttggtgaaacaactacagatggattctgaagcacgaaaagct 4208301 Query: 1900 ctcgaagcagacctggatgaagcaaccagatcactggacgagatgaacacgagtgcactg 1959 || ||||||||||||||||||||||| | ||||| ||||||||||||| ||||||| | Sbjct: 4208300 cttgaagcagacctggatgaagcaacaaagtcactagacgagatgaacaggagtgcatta 4208241 Query: 1960 tcactatctaaggcgctagagagcactcattccaagaatgccactcttgaggcagagaaa 2019 |||||||| |||| ||||||| ||| |||| | ||| | ||||||||| ||||||||| Sbjct: 4208240 tcactatcaaaggagctagaggaaactaattctaggaaggacactcttgaagcagagaaa 4208181 Query: 2020 gaaatgctatcaaaagctctcgatgaacaaacaaaactgacaaccgaggctcaagagaac 2079 ||||| ||||||| ||||| | ||| ||| || | ||||| || ||||| || ||| Sbjct: 4208180 aaaatgttatcaaaggctcttgctgagcaacagaagatcacaactgaagctcatgaaaac 4208121 Query: 2080 tgcgaggatgctcagaatcttatcacgaggcttcagacagaaagggagacttttgaaatg 2139 ||||||||||||||||||||| | ||||||||||| || | ||||| |||||||||| Sbjct: 4208120 actgaggatgctcagaatcttatctctaggcttcagactgagaaggagagttttgaaatg 4208061 Query: 2140 aggtctaggcacctcgaagaggaactggcgttagcgaagggtgagatgttgcgtctaaga 2199 ||| |||| || || |||||||| |||||||||| ||||||||||| ||||| |||||| Sbjct: 4208060 agggctagacatcttgaagaggagttggcgttagcaaagggtgagatattgcgcctaaga 4208001 Query: 2200 aggcagattagtgcaagcaaatcccagaaa 2229 |||||||||||| |||||| ||| |||||| Sbjct: 4208000 aggcagattagtacaagcagatcacagaaa 4207971 Score = 408 bits (206), Expect = e-110 Identities = 533/642 (83%) Strand = Plus / Minus Query: 621 caaattggctgaaaatgaggcagcaatctcatcgatgagggagacatatgaaaaaaggtt 680 |||| ||||||||||||||||||||||||||| ||||||||| | || || ||||| || Sbjct: 4209579 caaactggctgaaaatgaggcagcaatctcattgatgagggaaaactacgagaaaagatt 4209520 Query: 681 attagagcagcaagcggcacaaaagaagcaatctatgaagttccaggagcaggaagcttc 740 | || || ||| | ||||||||||||||| | |||||||| |||||||||||||| || Sbjct: 4209519 gctggatcaacaaacagcacaaaagaagcaagcaatgaagtttcaggagcaggaagcctc 4209460 Query: 741 attgctagatcaattgtcttcaacaaaaaagactgtaacatcactaagtgaagatttcag 800 | ||||||| |||||||||||||||||||| ||||| || ||||||||||| ||||| Sbjct: 4209459 tcttttagatcagttgtcttcaacaaaaaagacggtaacttcgctaagtgaagaattcag 4209400 Query: 801 aagggagaaggcacgggctgaggagctcaaggatgaaatacggcgattagaaagtagtat 860 |||||||||| ||| |||||||||||| | ||| |||||||| ||| |||| || ||| | Sbjct: 4209399 aagggagaagacactggctgaggagcttagggaagaaatacgtcgactagagagcagtct 4209340 Query: 861 tgataaagctgggaatgataaagaagtgcttgaagcccaactgacagaaaagtttggtga 920 || |||||||| |||| ||||| || ||||||||| |||||| |||||||| ||||| Sbjct: 4209339 tgcacaagctggggatgacaaagatgttcttgaagccaaactgaaggaaaagttgggtga 4209280 Query: 921 aatgagtgatttggaggaaaaattaagtcttctcagccaacagaatgatagtaaggagaa 980 | | |||| |||||||| ||||| | || |||||| | | ||||| ||||| | Sbjct: 4209279 tgtcaacattttgcaggaaaaagtaagtttgcttagccaagaaattgataataagggtat 4209220 Query: 981 acgcatcgaggaactcaactcatcactttcttcaaaggaagcagagtaccagaacctgcg 1040 ||||||| |||||||| |||| |||||| |||||||||||||| |||| || ||| | Sbjct: 4209219 acgcatcagggaactcagttcattactttcgtcaaaggaagcagactaccgtaatctgtg 4209160 Query: 1041 ccgtttctctcatcaaactaaagagagtcttgaatttgcaaatgctaaaatacaacagct 1100 | ||||||| | ||||||||||||||||| ||| ||||| | ||||||||||| || || Sbjct: 4209159 ctctttctctgaccaaactaaagagagtctagaacttgcagaagctaaaatacagcaact 4209100 Query: 1101 ggaggaagagattcatacaactaaaaatgatcttgcttctaagatatcttcaattgactc 1160 |||||||||| |||||| ||||| |||||||||| |||||||||||||||||||||| | Sbjct: 4209099 ggaggaagaggttcatagaactagaaatgatctttcttctaagatatcttcaattgattt 4209040 Query: 1161 actgaatgagaaacttcaagcattaaactctgcaaagaaggaagctgatgaaaaaataaa 1220 |||||||||| ||||||||||| | |||||||||||||| |||||||| ||||| ||| Sbjct: 4209039 actgaatgaggaacttcaagcactgaactctgcaaagaatgaagctgaggaaaagctaag 4208980 Query: 1221 tgagctaatcaaagagtgtacagacttgaaggcttcttctga 1262 |||| ||| ||||| | ||||||| |||||||||||||||| Sbjct: 4208979 tgagttaacaaaagattatacagacctgaaggcttcttctga 4208938 Score = 145 bits (73), Expect = 1e-30 Identities = 118/133 (88%) Strand = Plus / Minus Query: 480 gcaaaaacaatctccagggaatccacttgctggccttctgaatgcaattgcagttattgc 539 |||| ||||| |||| |||||||||||| |||| ||| ||||||||||||||||| ||| Sbjct: 4210188 gcaagaacaaactcctgggaatccactttctggtcttttgaatgcaattgcagttgctgc 4210129 Query: 540 ctcaggcgttcttgctggattgtatggtacatctcaacaggaaaagaaggccctgcaatc 599 ||| || |||||||||||| ||||||| || |||||||||||||||||||||||| |||| Sbjct: 4210128 ctccggtgttcttgctggactgtatggcacttctcaacaggaaaagaaggccctggaatc 4210069 Query: 600 tgtcgtctcatct 612 |||||||||||| Sbjct: 4210068 cgtcgtctcatct 4210056 Score = 69.9 bits (35), Expect = 5e-08 Identities = 53/59 (89%) Strand = Plus / Minus Query: 210 gtacgcgctggcgcgccgggccgtgctcctcggggtctccgcgctgccgctcctccgcg 268 ||||| ||||||||| |||| |||||||||||| ||||| ||||| ||||||||||||| Sbjct: 4211975 gtacgtgctggcgcggcggggcgtgctcctcggcgtctcggcgctcccgctcctccgcg 4211917
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1174_D05 Length = 128525 Score = 551 bits (278), Expect = e-153 Identities = 767/930 (82%) Strand = Plus / Minus Query: 1300 aaagatgatctgatcaaacaactggaagaaaagctctctgttgcactaagtgcctctagc 1359 |||||| || |||||||||| || || | ||| ||||||| |||| |||||| |||||| Sbjct: 46867 aaagataatatgatcaaacagcttgatggaaaactctctgatgcattaagtgattctagc 46808 Query: 1360 aaagaccatgaagtcattgccgagttgaacaaggaattggattccaccaaagcaatgtta 1419 ||||||| ||| ||| || | | ||||||||||||||||| | || ||||||||| || Sbjct: 46807 aaagaccgtgagaacatcgctgcgctgaacaaggaattggatgcaacaaaagcaatgcta 46748 Query: 1420 gacgatgaagttgcggcactgaaaagtcttagagatctacttaaatccactgaagagacc 1479 || |||||||||| ||| | |||||| | ||||| |||| ||||||| || ||| | Sbjct: 46747 gagaatgaagttgctgcagttaaaagtttaagagaatcacttcaatccacagaggaggca 46688 Query: 1480 ctaagtgattcccgaactgaggtttccaaactttccgaggaccttgatgaagcaaataga 1539 || | |||||| ||| |||||| ||||||||||| | ||| |||||||||||||||||| Sbjct: 46687 ctgacagattccagaagtgaggtatccaaactttcagtggaacttgatgaagcaaataga 46628 Query: 1540 atgaacaaggacctgtcattgcagatttcaaatctccaaagcgagttcaatgaaatgcaa 1599 |||||| |||||||| |||| ||||| || ||||| |||||||||||||||||| Sbjct: 46627 atgaaccaggacctggtgctgcaaatttctaaactccaggatgagttcaatgaaatgcaa 46568 Query: 1600 gaaggtctgacttacaagcttggagaggctgaatcagtatgtaaagctctatcagatgaa 1659 || || || ||| |||| || ||||||| |||||||||| ||||||||| ||||| ||| Sbjct: 46567 gagggccttactaacaaactaggagaggtagaatcagtatctaaagctctgtcagacgaa 46508 Query: 1660 gtggtgtcagctaaagagatggttcaaaagggacaggaagaacttgaagctacctctaat 1719 | || || | ||| ||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 46507 cttgtctctgttaaggagatggttcacaagggacaggaagaacttgaagccacttctaat 46448 Query: 1720 gggcttgcttctgctgtggaagctcgtgataacctgaagaaagaattgctggatgtgtac 1779 | |||||| || ||||||||||||||| |||||||||||||||||||| ||||||| | Sbjct: 46447 gagcttgcatccattgtggaagctcgtgacaacctgaagaaagaattgctcgatgtgttc 46388 Query: 1780 aagaaatttgaatccaccacacaggagcttgttgatgaaaggagagttgtgactactttg 1839 ||||| || |||||||| |||||||||||||||||||||||| | ||| ||||||||| Sbjct: 46387 aagaagttggaatccacgtcacaggagcttgttgatgaaaggaaaactgtcactactttg 46328 Query: 1840 aatagggagcttgaggctttggccaaacaattgaatgcagattctcaagcacgaaaagta 1899 |||||||||||||||||||||| |||||| | | |||||| |||||||||||| Sbjct: 46327 aatagggagcttgaggctttggtgaaacaactacagatggattctgaagcacgaaaagct 46268 Query: 1900 ctcgaagcagacctggatgaagcaaccagatcactggacgagatgaacacgagtgcactg 1959 || ||||||||||||||||||||||| | ||||| ||||||||||||| ||||||| | Sbjct: 46267 cttgaagcagacctggatgaagcaacaaagtcactagacgagatgaacaggagtgcatta 46208 Query: 1960 tcactatctaaggcgctagagagcactcattccaagaatgccactcttgaggcagagaaa 2019 |||||||| |||| ||||||| ||| |||| | ||| | ||||||||| ||||||||| Sbjct: 46207 tcactatcaaaggagctagaggaaactaattctaggaaggacactcttgaagcagagaaa 46148 Query: 2020 gaaatgctatcaaaagctctcgatgaacaaacaaaactgacaaccgaggctcaagagaac 2079 ||||| ||||||| ||||| | ||| ||| || | ||||| || ||||| || ||| Sbjct: 46147 aaaatgttatcaaaggctcttgctgagcaacagaagatcacaactgaagctcatgaaaac 46088 Query: 2080 tgcgaggatgctcagaatcttatcacgaggcttcagacagaaagggagacttttgaaatg 2139 ||||||||||||||||||||| | ||||||||||| || | ||||| |||||||||| Sbjct: 46087 actgaggatgctcagaatcttatctctaggcttcagactgagaaggagagttttgaaatg 46028 Query: 2140 aggtctaggcacctcgaagaggaactggcgttagcgaagggtgagatgttgcgtctaaga 2199 ||| |||| || || |||||||| |||||||||| ||||||||||| ||||| |||||| Sbjct: 46027 agggctagacatcttgaagaggagttggcgttagcaaagggtgagatattgcgcctaaga 45968 Query: 2200 aggcagattagtgcaagcaaatcccagaaa 2229 |||||||||||| |||||| ||| |||||| Sbjct: 45967 aggcagattagtacaagcagatcacagaaa 45938 Score = 408 bits (206), Expect = e-110 Identities = 533/642 (83%) Strand = Plus / Minus Query: 621 caaattggctgaaaatgaggcagcaatctcatcgatgagggagacatatgaaaaaaggtt 680 |||| ||||||||||||||||||||||||||| ||||||||| | || || ||||| || Sbjct: 47546 caaactggctgaaaatgaggcagcaatctcattgatgagggaaaactacgagaaaagatt 47487 Query: 681 attagagcagcaagcggcacaaaagaagcaatctatgaagttccaggagcaggaagcttc 740 | || || ||| | ||||||||||||||| | |||||||| |||||||||||||| || Sbjct: 47486 gctggatcaacaaacagcacaaaagaagcaagcaatgaagtttcaggagcaggaagcctc 47427 Query: 741 attgctagatcaattgtcttcaacaaaaaagactgtaacatcactaagtgaagatttcag 800 | ||||||| |||||||||||||||||||| ||||| || ||||||||||| ||||| Sbjct: 47426 tcttttagatcagttgtcttcaacaaaaaagacggtaacttcgctaagtgaagaattcag 47367 Query: 801 aagggagaaggcacgggctgaggagctcaaggatgaaatacggcgattagaaagtagtat 860 |||||||||| ||| |||||||||||| | ||| |||||||| ||| |||| || ||| | Sbjct: 47366 aagggagaagacactggctgaggagcttagggaagaaatacgtcgactagagagcagtct 47307 Query: 861 tgataaagctgggaatgataaagaagtgcttgaagcccaactgacagaaaagtttggtga 920 || |||||||| |||| ||||| || ||||||||| |||||| |||||||| ||||| Sbjct: 47306 tgcacaagctggggatgacaaagatgttcttgaagccaaactgaaggaaaagttgggtga 47247 Query: 921 aatgagtgatttggaggaaaaattaagtcttctcagccaacagaatgatagtaaggagaa 980 | | |||| |||||||| ||||| | || |||||| | | ||||| ||||| | Sbjct: 47246 tgtcaacattttgcaggaaaaagtaagtttgcttagccaagaaattgataataagggtat 47187 Query: 981 acgcatcgaggaactcaactcatcactttcttcaaaggaagcagagtaccagaacctgcg 1040 ||||||| |||||||| |||| |||||| |||||||||||||| |||| || ||| | Sbjct: 47186 acgcatcagggaactcagttcattactttcgtcaaaggaagcagactaccgtaatctgtg 47127 Query: 1041 ccgtttctctcatcaaactaaagagagtcttgaatttgcaaatgctaaaatacaacagct 1100 | ||||||| | ||||||||||||||||| ||| ||||| | ||||||||||| || || Sbjct: 47126 ctctttctctgaccaaactaaagagagtctagaacttgcagaagctaaaatacagcaact 47067 Query: 1101 ggaggaagagattcatacaactaaaaatgatcttgcttctaagatatcttcaattgactc 1160 |||||||||| |||||| ||||| |||||||||| |||||||||||||||||||||| | Sbjct: 47066 ggaggaagaggttcatagaactagaaatgatctttcttctaagatatcttcaattgattt 47007 Query: 1161 actgaatgagaaacttcaagcattaaactctgcaaagaaggaagctgatgaaaaaataaa 1220 |||||||||| ||||||||||| | |||||||||||||| |||||||| ||||| ||| Sbjct: 47006 actgaatgaggaacttcaagcactgaactctgcaaagaatgaagctgaggaaaagctaag 46947 Query: 1221 tgagctaatcaaagagtgtacagacttgaaggcttcttctga 1262 |||| ||| ||||| | ||||||| |||||||||||||||| Sbjct: 46946 tgagttaacaaaagattatacagacctgaaggcttcttctga 46905 Score = 145 bits (73), Expect = 1e-30 Identities = 118/133 (88%) Strand = Plus / Minus Query: 480 gcaaaaacaatctccagggaatccacttgctggccttctgaatgcaattgcagttattgc 539 |||| ||||| |||| |||||||||||| |||| ||| ||||||||||||||||| ||| Sbjct: 48155 gcaagaacaaactcctgggaatccactttctggtcttttgaatgcaattgcagttgctgc 48096 Query: 540 ctcaggcgttcttgctggattgtatggtacatctcaacaggaaaagaaggccctgcaatc 599 ||| || |||||||||||| ||||||| || |||||||||||||||||||||||| |||| Sbjct: 48095 ctccggtgttcttgctggactgtatggcacttctcaacaggaaaagaaggccctggaatc 48036 Query: 600 tgtcgtctcatct 612 |||||||||||| Sbjct: 48035 cgtcgtctcatct 48023 Score = 69.9 bits (35), Expect = 5e-08 Identities = 53/59 (89%) Strand = Plus / Minus Query: 210 gtacgcgctggcgcgccgggccgtgctcctcggggtctccgcgctgccgctcctccgcg 268 ||||| ||||||||| |||| |||||||||||| ||||| ||||| ||||||||||||| Sbjct: 49942 gtacgtgctggcgcggcggggcgtgctcctcggcgtctcggcgctcccgctcctccgcg 49884
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 551 bits (278), Expect = e-153 Identities = 767/930 (82%) Strand = Plus / Minus Query: 1300 aaagatgatctgatcaaacaactggaagaaaagctctctgttgcactaagtgcctctagc 1359 |||||| || |||||||||| || || | ||| ||||||| |||| |||||| |||||| Sbjct: 155871 aaagataatatgatcaaacagcttgatggaaaactctctgatgcattaagtgattctagc 155812 Query: 1360 aaagaccatgaagtcattgccgagttgaacaaggaattggattccaccaaagcaatgtta 1419 ||||||| ||| ||| || | | ||||||||||||||||| | || ||||||||| || Sbjct: 155811 aaagaccgtgagaacatcgctgcgctgaacaaggaattggatgcaacaaaagcaatgcta 155752 Query: 1420 gacgatgaagttgcggcactgaaaagtcttagagatctacttaaatccactgaagagacc 1479 || |||||||||| ||| | |||||| | ||||| |||| ||||||| || ||| | Sbjct: 155751 gagaatgaagttgctgcagttaaaagtttaagagaatcacttcaatccacagaggaggca 155692 Query: 1480 ctaagtgattcccgaactgaggtttccaaactttccgaggaccttgatgaagcaaataga 1539 || | |||||| ||| |||||| ||||||||||| | ||| |||||||||||||||||| Sbjct: 155691 ctgacagattccagaagtgaggtatccaaactttcagtggaacttgatgaagcaaataga 155632 Query: 1540 atgaacaaggacctgtcattgcagatttcaaatctccaaagcgagttcaatgaaatgcaa 1599 |||||| |||||||| |||| ||||| || ||||| |||||||||||||||||| Sbjct: 155631 atgaaccaggacctggtgctgcaaatttctaaactccaggatgagttcaatgaaatgcaa 155572 Query: 1600 gaaggtctgacttacaagcttggagaggctgaatcagtatgtaaagctctatcagatgaa 1659 || || || ||| |||| || ||||||| |||||||||| ||||||||| ||||| ||| Sbjct: 155571 gagggccttactaacaaactaggagaggtagaatcagtatctaaagctctgtcagacgaa 155512 Query: 1660 gtggtgtcagctaaagagatggttcaaaagggacaggaagaacttgaagctacctctaat 1719 | || || | ||| ||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 155511 cttgtctctgttaaggagatggttcacaagggacaggaagaacttgaagccacttctaat 155452 Query: 1720 gggcttgcttctgctgtggaagctcgtgataacctgaagaaagaattgctggatgtgtac 1779 | |||||| || ||||||||||||||| |||||||||||||||||||| ||||||| | Sbjct: 155451 gagcttgcatccattgtggaagctcgtgacaacctgaagaaagaattgctcgatgtgttc 155392 Query: 1780 aagaaatttgaatccaccacacaggagcttgttgatgaaaggagagttgtgactactttg 1839 ||||| || |||||||| |||||||||||||||||||||||| | ||| ||||||||| Sbjct: 155391 aagaagttggaatccacgtcacaggagcttgttgatgaaaggaaaactgtcactactttg 155332 Query: 1840 aatagggagcttgaggctttggccaaacaattgaatgcagattctcaagcacgaaaagta 1899 |||||||||||||||||||||| |||||| | | |||||| |||||||||||| Sbjct: 155331 aatagggagcttgaggctttggtgaaacaactacagatggattctgaagcacgaaaagct 155272 Query: 1900 ctcgaagcagacctggatgaagcaaccagatcactggacgagatgaacacgagtgcactg 1959 || ||||||||||||||||||||||| | ||||| ||||||||||||| ||||||| | Sbjct: 155271 cttgaagcagacctggatgaagcaacaaagtcactagacgagatgaacaggagtgcatta 155212 Query: 1960 tcactatctaaggcgctagagagcactcattccaagaatgccactcttgaggcagagaaa 2019 |||||||| |||| ||||||| ||| |||| | ||| | ||||||||| ||||||||| Sbjct: 155211 tcactatcaaaggagctagaggaaactaattctaggaaggacactcttgaagcagagaaa 155152 Query: 2020 gaaatgctatcaaaagctctcgatgaacaaacaaaactgacaaccgaggctcaagagaac 2079 ||||| ||||||| ||||| | ||| ||| || | ||||| || ||||| || ||| Sbjct: 155151 aaaatgttatcaaaggctcttgctgagcaacagaagatcacaactgaagctcatgaaaac 155092 Query: 2080 tgcgaggatgctcagaatcttatcacgaggcttcagacagaaagggagacttttgaaatg 2139 ||||||||||||||||||||| | ||||||||||| || | ||||| |||||||||| Sbjct: 155091 actgaggatgctcagaatcttatctctaggcttcagactgagaaggagagttttgaaatg 155032 Query: 2140 aggtctaggcacctcgaagaggaactggcgttagcgaagggtgagatgttgcgtctaaga 2199 ||| |||| || || |||||||| |||||||||| ||||||||||| ||||| |||||| Sbjct: 155031 agggctagacatcttgaagaggagttggcgttagcaaagggtgagatattgcgcctaaga 154972 Query: 2200 aggcagattagtgcaagcaaatcccagaaa 2229 |||||||||||| |||||| ||| |||||| Sbjct: 154971 aggcagattagtacaagcagatcacagaaa 154942 Score = 335 bits (169), Expect = 5e-88 Identities = 424/509 (83%) Strand = Plus / Minus Query: 754 ttgtcttcaacaaaaaagactgtaacatcactaagtgaagatttcagaagggagaaggca 813 |||||||||||||||||||| ||||| || ||||||||||| ||||||||||||||| || Sbjct: 156417 ttgtcttcaacaaaaaagacggtaacttcgctaagtgaagaattcagaagggagaagaca 156358 Query: 814 cgggctgaggagctcaaggatgaaatacggcgattagaaagtagtattgataaagctggg 873 | |||||||||||| | ||| |||||||| ||| |||| || ||| ||| |||||||| Sbjct: 156357 ctggctgaggagcttagggaagaaatacgtcgactagagagcagtcttgcacaagctggg 156298 Query: 874 aatgataaagaagtgcttgaagcccaactgacagaaaagtttggtgaaatgagtgatttg 933 |||| ||||| || ||||||||| |||||| |||||||| ||||| | | |||| Sbjct: 156297 gatgacaaagatgttcttgaagccaaactgaaggaaaagttgggtgatgtcaacattttg 156238 Query: 934 gaggaaaaattaagtcttctcagccaacagaatgatagtaaggagaaacgcatcgaggaa 993 |||||||| ||||| | || |||||| | | ||||| ||||| | ||||||| |||| Sbjct: 156237 caggaaaaagtaagtttgcttagccaagaaattgataataagggtatacgcatcagggaa 156178 Query: 994 ctcaactcatcactttcttcaaaggaagcagagtaccagaacctgcgccgtttctctcat 1053 |||| |||| |||||| |||||||||||||| |||| || ||| || ||||||| | Sbjct: 156177 ctcagttcattactttcgtcaaaggaagcagactaccgtaatctgtgctctttctctgac 156118 Query: 1054 caaactaaagagagtcttgaatttgcaaatgctaaaatacaacagctggaggaagagatt 1113 ||||||||||||||||| ||| ||||| | ||||||||||| || |||||||||||| || Sbjct: 156117 caaactaaagagagtctagaacttgcagaagctaaaatacagcaactggaggaagaggtt 156058 Query: 1114 catacaactaaaaatgatcttgcttctaagatatcttcaattgactcactgaatgagaaa 1173 |||| ||||| |||||||||| |||||||||||||||||||||| | |||||||||| || Sbjct: 156057 catagaactagaaatgatctttcttctaagatatcttcaattgatttactgaatgaggaa 155998 Query: 1174 cttcaagcattaaactctgcaaagaaggaagctgatgaaaaaataaatgagctaatcaaa 1233 ||||||||| | |||||||||||||| |||||||| ||||| ||| |||| ||| ||| Sbjct: 155997 cttcaagcactgaactctgcaaagaatgaagctgaggaaaagctaagtgagttaacaaaa 155938 Query: 1234 gagtgtacagacttgaaggcttcttctga 1262 || | ||||||| |||||||||||||||| Sbjct: 155937 gattatacagacctgaaggcttcttctga 155909
>dbj|AK120377.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071N06, full insert sequence Length = 2715 Score = 551 bits (278), Expect = e-153 Identities = 767/930 (82%) Strand = Plus / Plus Query: 1300 aaagatgatctgatcaaacaactggaagaaaagctctctgttgcactaagtgcctctagc 1359 |||||| || |||||||||| || || | ||| ||||||| |||| |||||| |||||| Sbjct: 1371 aaagataatatgatcaaacagcttgatggaaaactctctgatgcattaagtgattctagc 1430 Query: 1360 aaagaccatgaagtcattgccgagttgaacaaggaattggattccaccaaagcaatgtta 1419 ||||||| ||| ||| || | | ||||||||||||||||| | || ||||||||| || Sbjct: 1431 aaagaccgtgagaacatcgctgcgctgaacaaggaattggatgcaacaaaagcaatgcta 1490 Query: 1420 gacgatgaagttgcggcactgaaaagtcttagagatctacttaaatccactgaagagacc 1479 || |||||||||| ||| | |||||| | ||||| |||| ||||||| || ||| | Sbjct: 1491 gagaatgaagttgctgcagttaaaagtttaagagaatcacttcaatccacagaggaggca 1550 Query: 1480 ctaagtgattcccgaactgaggtttccaaactttccgaggaccttgatgaagcaaataga 1539 || | |||||| ||| |||||| ||||||||||| | ||| |||||||||||||||||| Sbjct: 1551 ctgacagattccagaagtgaggtatccaaactttcagtggaacttgatgaagcaaataga 1610 Query: 1540 atgaacaaggacctgtcattgcagatttcaaatctccaaagcgagttcaatgaaatgcaa 1599 |||||| |||||||| |||| ||||| || ||||| |||||||||||||||||| Sbjct: 1611 atgaaccaggacctggtgctgcaaatttctaaactccaggatgagttcaatgaaatgcaa 1670 Query: 1600 gaaggtctgacttacaagcttggagaggctgaatcagtatgtaaagctctatcagatgaa 1659 || || || ||| |||| || ||||||| |||||||||| ||||||||| ||||| ||| Sbjct: 1671 gagggccttactaacaaactaggagaggtagaatcagtatctaaagctctgtcagacgaa 1730 Query: 1660 gtggtgtcagctaaagagatggttcaaaagggacaggaagaacttgaagctacctctaat 1719 | || || | ||| ||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 1731 cttgtctctgttaaggagatggttcacaagggacaggaagaacttgaagccacttctaat 1790 Query: 1720 gggcttgcttctgctgtggaagctcgtgataacctgaagaaagaattgctggatgtgtac 1779 | |||||| || ||||||||||||||| |||||||||||||||||||| ||||||| | Sbjct: 1791 gagcttgcatccattgtggaagctcgtgacaacctgaagaaagaattgctcgatgtgttc 1850 Query: 1780 aagaaatttgaatccaccacacaggagcttgttgatgaaaggagagttgtgactactttg 1839 ||||| || |||||||| |||||||||||||||||||||||| | ||| ||||||||| Sbjct: 1851 aagaagttggaatccacgtcacaggagcttgttgatgaaaggaaaactgtcactactttg 1910 Query: 1840 aatagggagcttgaggctttggccaaacaattgaatgcagattctcaagcacgaaaagta 1899 |||||||||||||||||||||| |||||| | | |||||| |||||||||||| Sbjct: 1911 aatagggagcttgaggctttggtgaaacaactacagatggattctgaagcacgaaaagct 1970 Query: 1900 ctcgaagcagacctggatgaagcaaccagatcactggacgagatgaacacgagtgcactg 1959 || ||||||||||||||||||||||| | ||||| ||||||||||||| ||||||| | Sbjct: 1971 cttgaagcagacctggatgaagcaacaaagtcactagacgagatgaacaggagtgcatta 2030 Query: 1960 tcactatctaaggcgctagagagcactcattccaagaatgccactcttgaggcagagaaa 2019 |||||||| |||| ||||||| ||| |||| | ||| | ||||||||| ||||||||| Sbjct: 2031 tcactatcaaaggagctagaggaaactaattctaggaaggacactcttgaagcagagaaa 2090 Query: 2020 gaaatgctatcaaaagctctcgatgaacaaacaaaactgacaaccgaggctcaagagaac 2079 ||||| ||||||| ||||| | ||| ||| || | ||||| || ||||| || ||| Sbjct: 2091 aaaatgttatcaaaggctcttgctgagcaacagaagatcacaactgaagctcatgaaaac 2150 Query: 2080 tgcgaggatgctcagaatcttatcacgaggcttcagacagaaagggagacttttgaaatg 2139 ||||||||||||||||||||| | ||||||||||| || | ||||| |||||||||| Sbjct: 2151 actgaggatgctcagaatcttatctctaggcttcagactgagaaggagagttttgaaatg 2210 Query: 2140 aggtctaggcacctcgaagaggaactggcgttagcgaagggtgagatgttgcgtctaaga 2199 ||| |||| || || |||||||| |||||||||| ||||||||||| ||||| |||||| Sbjct: 2211 agggctagacatcttgaagaggagttggcgttagcaaagggtgagatattgcgcctaaga 2270 Query: 2200 aggcagattagtgcaagcaaatcccagaaa 2229 |||||||||||| |||||| ||| |||||| Sbjct: 2271 aggcagattagtacaagcagatcacagaaa 2300 Score = 545 bits (275), Expect = e-151 Identities = 656/783 (83%) Strand = Plus / Plus Query: 480 gcaaaaacaatctccagggaatccacttgctggccttctgaatgcaattgcagttattgc 539 |||| ||||| |||| |||||||||||| |||| ||| ||||||||||||||||| ||| Sbjct: 551 gcaagaacaaactcctgggaatccactttctggtcttttgaatgcaattgcagttgctgc 610 Query: 540 ctcaggcgttcttgctggattgtatggtacatctcaacaggaaaagaaggccctgcaatc 599 ||| || |||||||||||| ||||||| || |||||||||||||||||||||||| |||| Sbjct: 611 ctccggtgttcttgctggactgtatggcacttctcaacaggaaaagaaggccctggaatc 670 Query: 600 tgtcgtctcatctttggaggtcaaattggctgaaaatgaggcagcaatctcatcgatgag 659 |||||||||||| ||||| |||| ||||||||||||||||||||||||||| |||||| Sbjct: 671 cgtcgtctcatctatggagagcaaactggctgaaaatgaggcagcaatctcattgatgag 730 Query: 660 ggagacatatgaaaaaaggttattagagcagcaagcggcacaaaagaagcaatctatgaa 719 ||| | || || ||||| || | || || ||| | ||||||||||||||| | ||||| Sbjct: 731 ggaaaactacgagaaaagattgctggatcaacaaacagcacaaaagaagcaagcaatgaa 790 Query: 720 gttccaggagcaggaagcttcattgctagatcaattgtcttcaacaaaaaagactgtaac 779 ||| |||||||||||||| || | ||||||| |||||||||||||||||||| ||||| Sbjct: 791 gtttcaggagcaggaagcctctcttttagatcagttgtcttcaacaaaaaagacggtaac 850 Query: 780 atcactaagtgaagatttcagaagggagaaggcacgggctgaggagctcaaggatgaaat 839 || ||||||||||| ||||||||||||||| ||| |||||||||||| | ||| ||||| Sbjct: 851 ttcgctaagtgaagaattcagaagggagaagacactggctgaggagcttagggaagaaat 910 Query: 840 acggcgattagaaagtagtattgataaagctgggaatgataaagaagtgcttgaagccca 899 ||| ||| |||| || ||| ||| |||||||| |||| ||||| || ||||||||| | Sbjct: 911 acgtcgactagagagcagtcttgcacaagctggggatgacaaagatgttcttgaagccaa 970 Query: 900 actgacagaaaagtttggtgaaatgagtgatttggaggaaaaattaagtcttctcagcca 959 ||||| |||||||| ||||| | | |||| |||||||| ||||| | || ||||| Sbjct: 971 actgaaggaaaagttgggtgatgtcaacattttgcaggaaaaagtaagtttgcttagcca 1030 Query: 960 acagaatgatagtaaggagaaacgcatcgaggaactcaactcatcactttcttcaaagga 1019 | | | ||||| ||||| | ||||||| |||||||| |||| |||||| |||||||| Sbjct: 1031 agaaattgataataagggtatacgcatcagggaactcagttcattactttcgtcaaagga 1090 Query: 1020 agcagagtaccagaacctgcgccgtttctctcatcaaactaaagagagtcttgaatttgc 1079 |||||| |||| || ||| || ||||||| | ||||||||||||||||| ||| |||| Sbjct: 1091 agcagactaccgtaatctgtgctctttctctgaccaaactaaagagagtctagaacttgc 1150 Query: 1080 aaatgctaaaatacaacagctggaggaagagattcatacaactaaaaatgatcttgcttc 1139 | | ||||||||||| || |||||||||||| |||||| ||||| |||||||||| |||| Sbjct: 1151 agaagctaaaatacagcaactggaggaagaggttcatagaactagaaatgatctttcttc 1210 Query: 1140 taagatatcttcaattgactcactgaatgagaaacttcaagcattaaactctgcaaagaa 1199 |||||||||||||||||| | |||||||||| ||||||||||| | |||||||||||||| Sbjct: 1211 taagatatcttcaattgatttactgaatgaggaacttcaagcactgaactctgcaaagaa 1270 Query: 1200 ggaagctgatgaaaaaataaatgagctaatcaaagagtgtacagacttgaaggcttcttc 1259 |||||||| ||||| ||| |||| ||| ||||| | ||||||| ||||||||||||| Sbjct: 1271 tgaagctgaggaaaagctaagtgagttaacaaaagattatacagacctgaaggcttcttc 1330 Query: 1260 tga 1262 ||| Sbjct: 1331 tga 1333 Score = 69.9 bits (35), Expect = 5e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 210 gtacgcgctggcgcgccgggccgtgctcctcggggtctccgcgctgccgctcctccgcg 268 ||||| ||||||||| |||| |||||||||||| ||||| ||||| ||||||||||||| Sbjct: 329 gtacgtgctggcgcggcggggcgtgctcctcggcgtctcggcgctcccgctcctccgcg 387
>dbj|AK061954.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F06, full insert sequence Length = 1411 Score = 551 bits (278), Expect = e-153 Identities = 767/930 (82%) Strand = Plus / Plus Query: 1300 aaagatgatctgatcaaacaactggaagaaaagctctctgttgcactaagtgcctctagc 1359 |||||| || |||||||||| || || | ||| ||||||| |||| |||||| |||||| Sbjct: 139 aaagataatatgatcaaacagcttgatggaaaactctctgatgcattaagtgattctagc 198 Query: 1360 aaagaccatgaagtcattgccgagttgaacaaggaattggattccaccaaagcaatgtta 1419 ||||||| ||| ||| || | | ||||||||||||||||| | || ||||||||| || Sbjct: 199 aaagaccgtgagaacatcgctgcgctgaacaaggaattggatgcaacaaaagcaatgcta 258 Query: 1420 gacgatgaagttgcggcactgaaaagtcttagagatctacttaaatccactgaagagacc 1479 || |||||||||| ||| | |||||| | ||||| |||| ||||||| || ||| | Sbjct: 259 gagaatgaagttgctgcagttaaaagtttaagagaatcacttcaatccacagaggaggca 318 Query: 1480 ctaagtgattcccgaactgaggtttccaaactttccgaggaccttgatgaagcaaataga 1539 || | |||||| ||| |||||| ||||||||||| | ||| ||||||||||||||| || Sbjct: 319 ctgacagattccagaagtgaggtatccaaactttcagtggaacttgatgaagcaaattga 378 Query: 1540 atgaacaaggacctgtcattgcagatttcaaatctccaaagcgagttcaatgaaatgcaa 1599 |||||| |||||||| |||| ||||| || ||||| |||||||||||||||||| Sbjct: 379 atgaaccaggacctggtgctgcaaatttctaaactccaggatgagttcaatgaaatgcaa 438 Query: 1600 gaaggtctgacttacaagcttggagaggctgaatcagtatgtaaagctctatcagatgaa 1659 || || || ||| ||||||| ||||||| |||||||||| ||||||||| ||||| ||| Sbjct: 439 gagggccttactaacaagctaggagaggtagaatcagtatctaaagctctgtcagacgaa 498 Query: 1660 gtggtgtcagctaaagagatggttcaaaagggacaggaagaacttgaagctacctctaat 1719 | || || | ||| ||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 499 cttgtctctgttaaggagatggttcacaagggacaggaagaacttgaagccacttctaat 558 Query: 1720 gggcttgcttctgctgtggaagctcgtgataacctgaagaaagaattgctggatgtgtac 1779 | |||||| || ||||||||||||||| |||||||||||||||||||| ||||||| | Sbjct: 559 gagcttgcatccattgtggaagctcgtgacaacctgaagaaagaattgctcgatgtgttc 618 Query: 1780 aagaaatttgaatccaccacacaggagcttgttgatgaaaggagagttgtgactactttg 1839 ||||| || |||||||| |||||||||||||||||||||||| | ||| ||||||||| Sbjct: 619 aagaagttggaatccacgtcacaggagcttgttgatgaaaggaaaactgtcactactttg 678 Query: 1840 aatagggagcttgaggctttggccaaacaattgaatgcagattctcaagcacgaaaagta 1899 |||||||||||||||||||||| |||||| | | |||||| |||||||||||| Sbjct: 679 aatagggagcttgaggctttggtgaaacaactacagatggattctgaagcacgaaaagct 738 Query: 1900 ctcgaagcagacctggatgaagcaaccagatcactggacgagatgaacacgagtgcactg 1959 || ||||||||||||||||||||||| | ||||| ||||||||||||| ||||||| | Sbjct: 739 cttgaagcagacctggatgaagcaacaaagtcactagacgagatgaacaggagtgcatta 798 Query: 1960 tcactatctaaggcgctagagagcactcattccaagaatgccactcttgaggcagagaaa 2019 |||||||| |||| ||||||| ||| |||| | ||| | ||||||||| ||||||||| Sbjct: 799 tcactatcaaaggagctagaggaaactaattctaggaaggacactcttgaagcagagaaa 858 Query: 2020 gaaatgctatcaaaagctctcgatgaacaaacaaaactgacaaccgaggctcaagagaac 2079 ||||| ||||||| ||||| | ||| ||| || | ||||| || ||||| || ||| Sbjct: 859 aaaatgttatcaaaggctcttgctgagcaacagaagatcacaactgaagctcatgaaaac 918 Query: 2080 tgcgaggatgctcagaatcttatcacgaggcttcagacagaaagggagacttttgaaatg 2139 ||||||||||||||||||||| | ||||||||||| || | ||||| |||||||||| Sbjct: 919 actgaggatgctcagaatcttatctctaggcttcagactgagaaggagagttttgaaatg 978 Query: 2140 aggtctaggcacctcgaagaggaactggcgttagcgaagggtgagatgttgcgtctaaga 2199 ||| |||| || || |||||||| |||||||||| ||||||||||| ||||| |||||| Sbjct: 979 agggctagacatcttgaagaggagttggcgttagcaaagggtgagatattgcgcctaaga 1038 Query: 2200 aggcagattagtgcaagcaaatcccagaaa 2229 |||||||||||| |||||| ||| |||||| Sbjct: 1039 aggcagattagtacaagcagatcacagaaa 1068 Score = 89.7 bits (45), Expect = 5e-14 Identities = 87/101 (86%) Strand = Plus / Plus Query: 1162 ctgaatgagaaacttcaagcattaaactctgcaaagaaggaagctgatgaaaaaataaat 1221 ||||||||| ||||||||||| | |||||||||||||| |||||||| ||||| ||| | Sbjct: 1 ctgaatgaggaacttcaagcactgaactctgcaaagaatgaagctgaggaaaagctaagt 60 Query: 1222 gagctaatcaaagagtgtacagacttgaaggcttcttctga 1262 ||| ||| ||||| | ||||||| |||||||||||||||| Sbjct: 61 gagttaacaaaagattatacagacctgaaggcttcttctga 101
>ref|NM_001061343.1| Oryza sativa (japonica cultivar-group) Os05g0180400 (Os05g0180400) mRNA, complete cds Length = 2448 Score = 107 bits (54), Expect = 2e-19 Identities = 126/150 (84%) Strand = Plus / Plus Query: 498 gaatccacttgctggccttctgaatgcaattgcagttattgcctcaggcgttcttgctgg 557 |||||||||||| || |||||||||||||| ||||||||||| || || ||| ||||||| Sbjct: 348 gaatccacttgcaggtcttctgaatgcaatcgcagttattgcttctggtgtttttgctgg 407 Query: 558 attgtatggtacatctcaacaggaaaagaaggccctgcaatctgtcgtctcatctttgga 617 | | | |||| | |||||| |||||| |||| |||||||| ||||||| || |||| Sbjct: 408 actttttggtgcttctcaaagggaaaaagaggcgttgcaatctaccgtctcaactatgga 467 Query: 618 ggtcaaattggctgaaaatgaggcagcaat 647 | |||| ||||||||||||||||||||||| Sbjct: 468 gatcaagttggctgaaaatgaggcagcaat 497
>dbj|AK240924.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065039N21, full insert sequence Length = 2540 Score = 99.6 bits (50), Expect = 5e-17 Identities = 125/150 (83%) Strand = Plus / Plus Query: 498 gaatccacttgctggccttctgaatgcaattgcagttattgcctcaggcgttcttgctgg 557 |||||||||||| || |||||||||||||| ||||||||||| || || ||| ||||||| Sbjct: 461 gaatccacttgcaggtcttctgaatgcaatcgcagttattgcttctggtgtttttgctgg 520 Query: 558 attgtatggtacatctcaacaggaaaagaaggccctgcaatctgtcgtctcatctttgga 617 | | | |||| | |||||| |||||| |||| |||||||| ||||||| || |||| Sbjct: 521 actttttggtgcttctcaaagggaaaaagaggcgttgcaatctaccgtctcaactatgga 580 Query: 618 ggtcaaattggctgaaaatgaggcagcaat 647 | |||| |||||||||||||||||| |||| Sbjct: 581 gatcaagttggctgaaaatgaggcaacaat 610
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 69.9 bits (35), Expect = 5e-08 Identities = 53/59 (89%) Strand = Plus / Minus Query: 210 gtacgcgctggcgcgccgggccgtgctcctcggggtctccgcgctgccgctcctccgcg 268 ||||| ||||||||| |||| | |||||||||| ||||| ||||||||||||||||||| Sbjct: 6217678 gtacgtgctggcgcggcggggcttgctcctcggcgtctcggcgctgccgctcctccgcg 6217620
>dbj|AP005818.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0009H03 Length = 151685 Score = 69.9 bits (35), Expect = 5e-08 Identities = 53/59 (89%) Strand = Plus / Minus Query: 210 gtacgcgctggcgcgccgggccgtgctcctcggggtctccgcgctgccgctcctccgcg 268 ||||| ||||||||| |||| | |||||||||| ||||| ||||||||||||||||||| Sbjct: 105578 gtacgtgctggcgcggcggggcttgctcctcggcgtctcggcgctgccgctcctccgcg 105520
>dbj|AP005562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1190_B07 Length = 140200 Score = 69.9 bits (35), Expect = 5e-08 Identities = 53/59 (89%) Strand = Plus / Minus Query: 210 gtacgcgctggcgcgccgggccgtgctcctcggggtctccgcgctgccgctcctccgcg 268 ||||| ||||||||| |||| | |||||||||| ||||| ||||||||||||||||||| Sbjct: 62961 gtacgtgctggcgcggcggggcttgctcctcggcgtctcggcgctgccgctcctccgcg 62903
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 65.9 bits (33), Expect = 7e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 498 gaatccacttgctggccttctgaatgcaattgcagttattgcctcaggcgttcttgctgg 557 |||||||||||| || |||||||||||||| ||||||||||| || || ||| ||||||| Sbjct: 144942 gaatccacttgcaggtcttctgaatgcaatcgcagttattgcttctggtgtttttgctgg 144883 Query: 558 a 558 | Sbjct: 144882 a 144882 Score = 52.0 bits (26), Expect = 0.011 Identities = 32/34 (94%) Strand = Plus / Minus Query: 614 tggaggtcaaattggctgaaaatgaggcagcaat 647 ||||| |||| ||||||||||||||||||||||| Sbjct: 144093 tggagatcaagttggctgaaaatgaggcagcaat 144060
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 65.9 bits (33), Expect = 7e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 498 gaatccacttgctggccttctgaatgcaattgcagttattgcctcaggcgttcttgctgg 557 |||||||||||| || |||||||||||||| ||||||||||| || || ||| ||||||| Sbjct: 4776937 gaatccacttgcaggtcttctgaatgcaatcgcagttattgcttctggtgtttttgctgg 4776878 Query: 558 a 558 | Sbjct: 4776877 a 4776877 Score = 52.0 bits (26), Expect = 0.011 Identities = 32/34 (94%) Strand = Plus / Minus Query: 614 tggaggtcaaattggctgaaaatgaggcagcaat 647 ||||| |||| ||||||||||||||||||||||| Sbjct: 4776088 tggagatcaagttggctgaaaatgaggcagcaat 4776055
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 65.9 bits (33), Expect = 7e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 498 gaatccacttgctggccttctgaatgcaattgcagttattgcctcaggcgttcttgctgg 557 |||||||||||| || |||||||||||||| ||||||||||| || || ||| ||||||| Sbjct: 49345 gaatccacttgcaggtcttctgaatgcaatcgcagttattgcttctggtgtttttgctgg 49286 Query: 558 a 558 | Sbjct: 49285 a 49285 Score = 52.0 bits (26), Expect = 0.011 Identities = 32/34 (94%) Strand = Plus / Minus Query: 614 tggaggtcaaattggctgaaaatgaggcagcaat 647 ||||| |||| ||||||||||||||||||||||| Sbjct: 48496 tggagatcaagttggctgaaaatgaggcagcaat 48463
>ref|XM_001017748.1| Tetrahymena thermophila SB210 TPR Domain containing protein (TTHERM_00437520) mRNA, complete cds Length = 1101 Score = 46.1 bits (23), Expect = 0.69 Identities = 23/23 (100%) Strand = Plus / Minus Query: 920 aaatgagtgatttggaggaaaaa 942 ||||||||||||||||||||||| Sbjct: 1065 aaatgagtgatttggaggaaaaa 1043
>dbj|AK236860.1| Sus scrofa mRNA, clone:PBL010027D12, expressed in periphral blood mononuclear cell Length = 2978 Score = 46.1 bits (23), Expect = 0.69 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1313 tcaaacaactggaagaaaagctc 1335 ||||||||||||||||||||||| Sbjct: 1138 tcaaacaactggaagaaaagctc 1160
>dbj|AK236168.1| Sus scrofa mRNA, clone:OVRM10160A01, expressed in ovary Length = 2918 Score = 46.1 bits (23), Expect = 0.69 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1313 tcaaacaactggaagaaaagctc 1335 ||||||||||||||||||||||| Sbjct: 1068 tcaaacaactggaagaaaagctc 1090
>emb|AL513303.11| Human DNA sequence from clone RP11-464C19 on chromosome 10 Contains the 5' end of the COPEB gene for core promoter element binding protein (GBF ZF9 Zf9 BCD1 CPBP KLF6), two novel genes and a CpG island, complete sequence Length = 187833 Score = 46.1 bits (23), Expect = 0.69 Identities = 23/23 (100%) Strand = Plus / Minus Query: 421 actcagtcagaaactcctctact 443 ||||||||||||||||||||||| Sbjct: 122560 actcagtcagaaactcctctact 122538
>gb|AC161533.22| Mus musculus chromosome 3, clone RP23-55N2, complete sequence Length = 158774 Score = 46.1 bits (23), Expect = 0.69 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1189 tctgcaaagaaggaagctgatga 1211 ||||||||||||||||||||||| Sbjct: 19863 tctgcaaagaaggaagctgatga 19841
>gb|AC002994.3| Homo sapiens chromosome 17, clone RP5-987K16, complete sequence Length = 143811 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 628 gctgaaaatgaggcagcaatct 649 |||||||||||||||||||||| Sbjct: 75390 gctgaaaatgaggcagcaatct 75411
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1565 tttcaaatctccaaagcgagtt 1586 |||||||||||||||||||||| Sbjct: 324966 tttcaaatctccaaagcgagtt 324945
>gb|AY981877.1| Uncultured bacterium clone NX52 16S ribosomal RNA gene, partial sequence Length = 1353 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1633 tcagtatgtaaagctctatcag 1654 |||||||||||||||||||||| Sbjct: 406 tcagtatgtaaagctctatcag 427
>gb|AY916262.1| Uncultured bacterium clone LL95 16S ribosomal RNA gene, partial sequence Length = 1344 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1633 tcagtatgtaaagctctatcag 1654 |||||||||||||||||||||| Sbjct: 400 tcagtatgtaaagctctatcag 421
>gb|AC105066.12| Mus musculus chromosome 8, clone RP23-158A22, complete sequence Length = 238527 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 720 gttccaggagcaggaagcttca 741 |||||||||||||||||||||| Sbjct: 75924 gttccaggagcaggaagcttca 75903
>ref|XM_566568.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNA01200) partial mRNA Length = 3308 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1565 tttcaaatctccaaagcgagtt 1586 |||||||||||||||||||||| Sbjct: 2954 tttcaaatctccaaagcgagtt 2975
>gb|AC021220.7| Homo sapiens BAC clone RP11-530I17 from 4, complete sequence Length = 173794 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 668 atgaaaaaaggttattagagca 689 |||||||||||||||||||||| Sbjct: 139887 atgaaaaaaggttattagagca 139866
>emb|AL445464.9| Human DNA sequence from clone RP11-262K24 on chromosome 1 Contains the 3' end of the MSH4 gene for mutS homolog 4 (E. coli) and the 3' end of the ASB17 gene for ankyrin repeat and SOCS box-containing 17, complete sequence Length = 103097 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 628 gctgaaaatgaggcagcaatct 649 |||||||||||||||||||||| Sbjct: 86319 gctgaaaatgaggcagcaatct 86298
>gb|AY268350.1| Homo sapiens mutS homolog 4 (E. coli) (MSH4) gene, complete cds Length = 118484 Score = 44.1 bits (22), Expect = 2.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 628 gctgaaaatgaggcagcaatct 649 |||||||||||||||||||||| Sbjct: 112799 gctgaaaatgaggcagcaatct 112778 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 546,880,774 Number of extensions: 29766283 Number of successful extensions: 169519 Number of sequences better than 10.0: 28 Number of HSP's gapped: 169503 Number of HSP's successfully gapped: 70 Length of query: 2796 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2773 Effective length of database: 18,503,978,556 Effective search space: 51311532535788 Effective search space used: 51311532535788 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)