ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf8i13 |
|---|---|
| Clone Library Name | barley_pub |
>AK058874:Os06g0274000 | Length = 99 Score = 155 bits (393), Expect = 1e-38 Identities = 78/89 (87%), Positives = 85/89 (95%) Frame = +3 Query: 105 SNSGGIPIKAEQDSDGSAQSTADMTAFVQNLLVQMQTRFQTMSENIITKIDEMGARIDEL 284 S SGGIPIKA+QDSDGSAQSTADMTAFVQNLL+QMQTRFQ+MSENII+KIDEMGARIDEL Sbjct: 6 SGSGGIPIKADQDSDGSAQSTADMTAFVQNLLMQMQTRFQSMSENIISKIDEMGARIDEL 65 Query: 285 ELSINDLKAEMGSDGMTPTKVKDEESKPA 371 E SINDLK EMG++G+TPTK KDEESKPA Sbjct: 66 EQSINDLKVEMGTEGITPTKPKDEESKPA 94
>AB110195:Os06g0274000 | Length = 99 Score = 155 bits (393), Expect = 1e-38 Identities = 78/89 (87%), Positives = 85/89 (95%) Frame = +3 Query: 105 SNSGGIPIKAEQDSDGSAQSTADMTAFVQNLLVQMQTRFQTMSENIITKIDEMGARIDEL 284 S SGGIPIKA+QDSDGSAQSTADMTAFVQNLL+QMQTRFQ+MSENII+KIDEMGARIDEL Sbjct: 6 SGSGGIPIKADQDSDGSAQSTADMTAFVQNLLMQMQTRFQSMSENIISKIDEMGARIDEL 65 Query: 285 ELSINDLKAEMGSDGMTPTKVKDEESKPA 371 E SINDLK EMG++G+TPTK KDEESKPA Sbjct: 66 EQSINDLKVEMGTEGITPTKPKDEESKPA 94
>AK066159:Os09g0375100 | Length = 88 Score = 55.5 bits (132), Expect = 2e-08 Identities = 29/43 (67%), Positives = 35/43 (81%) Frame = +3 Query: 246 TKIDEMGARIDELELSINDLKAEMGSDGMTPTKVKDEESKPAD 374 T +DEMG +IDELE S+NDLKAEMG+D PTK K +E+KPAD Sbjct: 47 TALDEMGTKIDELEQSVNDLKAEMGTD--VPTK-KADEAKPAD 86
>Os08g0344700:Os08g0344700 | Length = 1364 Score = 33.1 bits (74), Expect = 0.12 Identities = 21/76 (27%), Positives = 38/76 (50%) Frame = +3 Query: 132 AEQDSDGSAQSTADMTAFVQNLLVQMQTRFQTMSENIITKIDEMGARIDELELSINDLKA 311 AE D++ A AD+TA + N+LV +Q + + I E+ ++ +E+ + L+A Sbjct: 334 AEGDAESMATKVADLTASLNNILVSLQ-GMEKWIPCVDNGIRELNKSMEGIEVHVTALEA 392 Query: 312 EMGSDGMTPTKVKDEE 359 + TP + EE Sbjct: 393 STPMNMKTPVGPRVEE 408
>Os07g0589600:Os07g0589600 | Length = 285 Score = 32.0 bits (71), Expect = 0.26 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 6/33 (18%) Frame = +2 Query: 32 PKPQPRLTT------SGSVPAPPPAVDHGVFQL 112 P P P+L T +GS P PPPA G+F+L Sbjct: 145 PSPSPQLRTRPPRRSTGSAPPPPPATAWGIFRL 177
>Os10g0401900:Os10g0401900 | Length = 182 Score = 31.2 bits (69), Expect = 0.44 Identities = 18/49 (36%), Positives = 22/49 (44%) Frame = +2 Query: 20 LPRIPKPQPRLTTSGSVPAPPPAVDHGVFQLRRHPHQGRTGFGRLRPEH 166 LP P +T S PAPPPAVDH PH G ++ +H Sbjct: 85 LPTAAIPPEPMTPKKSSPAPPPAVDH--HHRLSPPHDAAGYNGGIQAQH 131
>AK058995:Os04g0402700 | Length = 90 Score = 31.2 bits (69), Expect = 0.44 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -1 Query: 117 RRSWKTPWSTAGGGAGTDPLVVSRG 43 RR W P S AGG AG+D + SRG Sbjct: 35 RRGWLDPASAAGGVAGSDVSICSRG 59
>AK068358:Os01g0928300 | Length = 318 Score = 30.4 bits (67), Expect = 0.75 Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 1/91 (1%) Frame = +3 Query: 90 STMASSNSGGIPIKAEQDSDGSAQS-TADMTAFVQNLLVQMQTRFQTMSENIITKIDEMG 266 ST A ++ G I I+ E D D S T D ++ + + + Q M Sbjct: 49 STAAEASEGLIEIREEYDEDTEINSSTLDASSSASGMPDKDREYTQIM------------ 96 Query: 267 ARIDELELSINDLKAEMGSDGMTPTKVKDEE 359 AR+DELE+ ND + DG +D+E Sbjct: 97 ARLDELEMEENDAGSTSEEDGEDDEDDEDDE 127
>Os01g0195700:Os01g0195700 | Length = 338 Score = 29.6 bits (65), Expect = 1.3 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 7/43 (16%) Frame = +2 Query: 35 KPQPRLTTSGSVPAPPPAVDHGVFQL-------RRHPHQGRTG 142 +PQP T+G P PPP V G F+ RR P G G Sbjct: 144 EPQPGRYTAGLPPPPPPPVTGGAFRRYARHLGPRRAPKPGACG 186
>Os01g0640700:Os01g0640700 | Length = 400 Score = 29.3 bits (64), Expect = 1.7 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = +2 Query: 29 IPKPQPRLTTSGSVPAPPPAVD 94 +P+PQP T + P+PPPA D Sbjct: 23 VPEPQPEPETPQASPSPPPAPD 44
>Os01g0807400:Os01g0807400 | Length = 261 Score = 28.5 bits (62), Expect = 2.8 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = +2 Query: 20 LPRIPKPQPRLTTSGSVPAPPPAVDHGVFQLRRHPHQGRTGFGRLRPE 163 LPR+ +P PR +++ S P PP A G R R RL P+ Sbjct: 99 LPRVRRPTPRPSSTAS-PTPPNAAGSGARVAGRRCRHRRLLLPRLPPQ 145
>AK121564:Os06g0637500 | Length = 311 Score = 28.5 bits (62), Expect = 2.9 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -1 Query: 120 CRRSWKTPWSTAGGGAGTDPLVVSRGWGLG 31 C+R TP S +G G+G+D +S G G G Sbjct: 147 CKRFSPTPDSPSGSGSGSDRSDLSHGGGFG 176
>AK120004:Os04g0492900 | Length = 172 Score = 28.5 bits (62), Expect = 2.9 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Frame = -1 Query: 228 WSGTWFASELEDFAQKQSYQRCSGRSRPNPVRP*WGCRRSWKTPWSTAG-GGA 73 W G W A ++ RC GR P PV P +W+ P S A GGA Sbjct: 69 WRGPWAAGCSCSGGWRRGGGRCPGRFIPPPVLP------AWRLPMSCARLGGA 115
>AK105817:Os06g0637500 | Length = 311 Score = 28.5 bits (62), Expect = 2.9 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -1 Query: 120 CRRSWKTPWSTAGGGAGTDPLVVSRGWGLG 31 C+R TP S +G G+G+D +S G G G Sbjct: 147 CKRFSPTPDSPSGSGSGSDRSDLSHGGGFG 176
>AB071331:Os01g0848400 | Length = 612 Score = 26.2 bits (56), Expect(2) = 3.7 Identities = 17/68 (25%), Positives = 31/68 (45%) Frame = +3 Query: 99 ASSNSGGIPIKAEQDSDGSAQSTADMTAFVQNLLVQMQTRFQTMSENIITKIDEMGARID 278 ASSN + + G AQ+T F V ++RF +E + +I ++G Sbjct: 150 ASSNPPPPQAQPRRQLGGLAQATGPFGPFTGYAAVLGRSRFLGPAEKLFEEICDVGGAAS 209 Query: 279 ELELSIND 302 ++ +I+D Sbjct: 210 HVDRTISD 217 Score = 20.4 bits (41), Expect(2) = 3.7 Identities = 9/22 (40%), Positives = 12/22 (54%) Frame = +2 Query: 20 LPRIPKPQPRLTTSGSVPAPPP 85 LP+IP L+ S + PPP Sbjct: 135 LPQIPTQNFSLSLSSASSNPPP 156
>AB071330:Os01g0848400 | Length = 612 Score = 26.2 bits (56), Expect(2) = 3.7 Identities = 17/68 (25%), Positives = 31/68 (45%) Frame = +3 Query: 99 ASSNSGGIPIKAEQDSDGSAQSTADMTAFVQNLLVQMQTRFQTMSENIITKIDEMGARID 278 ASSN + + G AQ+T F V ++RF +E + +I ++G Sbjct: 150 ASSNPPPPQAQPRRQLGGLAQATGPFGPFTGYAAVLGRSRFLGPAEKLFEEICDVGGAAS 209 Query: 279 ELELSIND 302 ++ +I+D Sbjct: 210 HVDRTISD 217 Score = 20.4 bits (41), Expect(2) = 3.7 Identities = 9/22 (40%), Positives = 12/22 (54%) Frame = +2 Query: 20 LPRIPKPQPRLTTSGSVPAPPP 85 LP+IP L+ S + PPP Sbjct: 135 LPQIPTQNFSLSLSSASSNPPP 156
>X57327:Os01g0702500 | Length = 228 Score = 28.1 bits (61), Expect = 3.7 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 4/36 (11%) Frame = +2 Query: 35 KPQPRLTTSGSVPAPPPAVDHGVFQL----RRHPHQ 130 +P PR T +G V P PAV G + L HPH+ Sbjct: 36 EPAPRDTAAGYVAPPDPAVSTGDYGLAGAEAPHPHE 71
>AY333185:Os01g0702500 | Length = 228 Score = 28.1 bits (61), Expect = 3.7 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 4/36 (11%) Frame = +2 Query: 35 KPQPRLTTSGSVPAPPPAVDHGVFQL----RRHPHQ 130 +P PR T +G V P PAV G + L HPH+ Sbjct: 36 EPAPRDTAAGYVAPPDPAVSTGDYGLAGAEAPHPHE 71
>AK120222:Os07g0596300 | Length = 754 Score = 28.1 bits (61), Expect = 3.7 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +2 Query: 32 PKPQPRLTTSGSVPAPPP 85 P P P +T SG+ P+PPP Sbjct: 158 PPPPPPITRSGAPPSPPP 175
>Os06g0711700:Os06g0711700 | Length = 436 Score = 27.7 bits (60), Expect = 4.9 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +2 Query: 59 SGSVPAPPPAVDHGVFQLRRHPHQGRTGFGRL 154 S +P+PPP + H F RR P Q GRL Sbjct: 141 SPPMPSPPPMLWHPSFLARRLPLQSVAAAGRL 172
>Os03g0308700:Os03g0308700 | Length = 464 Score = 27.7 bits (60), Expect = 4.9 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = +2 Query: 17 FLPRIPKPQPRLTTSGSVPAPPPAVDH 97 +LP P PR T S + P PPP+ H Sbjct: 262 WLPPPPSTPPRWTRSPTPPPPPPSPPH 288
>AK070197:Os02g0669100 | Length = 290 Score = 27.7 bits (60), Expect = 4.9 Identities = 15/69 (21%), Positives = 26/69 (37%) Frame = +2 Query: 32 PKPQPRLTTSGSVPAPPPAVDHGVFQLRRHPHQGRTGFGRLRPEHR*YDCFCAKSSSSDA 211 P P + T+ PAP P V HG H H ++ +H + ++ + Sbjct: 142 PAPPASVVTAAPTPAPAPVVTHG-----DHHHDTAVPVEKIEGDHAKTEATLPRAPEEEK 196 Query: 212 NQVPDHVRE 238 D ++E Sbjct: 197 KGFLDKIKE 205
>AK066107:Os01g0339500 | Length = 460 Score = 27.7 bits (60), Expect = 4.9 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = +2 Query: 20 LPRIPKPQPRLTTSGSVPAPPPAVDH 97 LP P +T S PAPPPAVD+ Sbjct: 300 LPTAAIPPEPMTPPTSSPAPPPAVDN 325
>Os12g0125700:Os12g0125700 | Length = 694 Score = 27.7 bits (60), Expect = 4.9 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = +1 Query: 28 NPQTPTPTDDEWICSGASSRRRPWRLPTPAASPS 129 +P P P D + SG P +LPTP+ PS Sbjct: 385 SPSLPHPLPDRFRRSGGVQMSDPSKLPTPSLLPS 418
>Os02g0126900:Os02g0126900 | Length = 381 Score = 27.3 bits (59), Expect = 6.3 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = +2 Query: 11 LTFLPRIPKPQPRLTTSGSVPAPPP 85 L LP P+P+P L +P PPP Sbjct: 25 LPLLPSQPRPRPTLRLRLLIPTPPP 49
>AK068847:Os02g0565400 | Length = 554 Score = 27.3 bits (59), Expect = 6.3 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +2 Query: 23 PRIPKPQPRLTTSGSVPAPPPAVDH 97 P P+PRL +GS A P AV H Sbjct: 36 PAAAAPRPRLRIAGSAAAAPNAVSH 60
>Os05g0551600:Os05g0551600 | Length = 275 Score = 27.3 bits (59), Expect = 6.4 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = +1 Query: 25 ENPQTPTPTDDEWICSGASSR-RRPWRLPTPAASPSRPN 138 + P TP+P + +G +SR RPW L T ++ P+ Sbjct: 69 KQPHTPSPEKGQETSAGGASRPSRPWNLRTRRSATVAPD 107
>AK120219:Os12g0486800 | Length = 147 Score = 27.3 bits (59), Expect = 6.4 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = -1 Query: 126 WGCRRSWKTPWSTAGGGAGTDPLVVSRGWGLGILGKNVR 10 W RR W+ A GAG + VVS G G+ G+ +R Sbjct: 16 WERRRRWRAAREEASVGAGEEASVVSSERG-GVGGREIR 53
>AK110125: | Length = 1189 Score = 26.9 bits (58), Expect = 8.3 Identities = 20/66 (30%), Positives = 25/66 (37%) Frame = +2 Query: 44 PRLTTSGSVPAPPPAVDHGVFQLRRHPHQGRTGFGRLRPEHR*YDCFCAKSSSSDANQVP 223 P + + ++P PPPA L P RT L P R F S +A Q P Sbjct: 307 PPIAAAAAIPPPPPAPPAPAASL---PPPTRTASAVLPPPVRKTVSF---QSQQEAQQAP 360 Query: 224 DHVREH 241 EH Sbjct: 361 QEAEEH 366
>AK108069:Os10g0489800 | Length = 383 Score = 26.9 bits (58), Expect = 8.3 Identities = 17/47 (36%), Positives = 19/47 (40%) Frame = +2 Query: 23 PRIPKPQPRLTTSGSVPAPPPAVDHGVFQLRRHPHQGRTGFGRLRPE 163 PR P PR +VP PP A G +LR R RPE Sbjct: 53 PRRAAPPPRRPPRRAVPVPPRAAPGGRLRLRLPLGAARGAPPATRPE 99
>AK068728:Os01g0564400 | Length = 153 Score = 26.9 bits (58), Expect = 8.3 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = +2 Query: 2 AAILTFLPRIPKPQPRLTTSGSVPAPPPA 88 AA L P P P L SG+ P PPPA Sbjct: 35 AAPLLLQPPPPGASPPLPHSGASPPPPPA 63
>AK100192:Os01g0726700 | Length = 662 Score = 26.9 bits (58), Expect = 8.4 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 2/36 (5%) Frame = +1 Query: 37 TPTPTDDEWICSGASSRRRP--WRLPTPAASPSRPN 138 TPTP+D S SSR P PTP +P P+ Sbjct: 253 TPTPSDTPPSPSSGSSRTTPGGCSTPTPCGTPPAPS 288 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 15,238,071 Number of extensions: 383446 Number of successful extensions: 2071 Number of sequences better than 10.0: 32 Number of HSP's gapped: 2046 Number of HSP's successfully gapped: 34 Length of query: 178 Length of database: 15,399,855 Length adjustment: 94 Effective length of query: 84 Effective length of database: 11,636,001 Effective search space: 977424084 Effective search space used: 977424084 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
