ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf8i13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q5RDI2:HSBP1_PONPY Heat shock factor-binding protein 1 - Pongo p... 59 1e-08
2O75506:HSBP1_HUMAN Heat shock factor-binding protein 1 - Homo sa... 59 1e-08
3Q3ZC22:HSBP1_BOVIN Heat shock factor-binding protein 1 - Bos tau... 59 1e-08
4Q9CQZ1:HSBP1_MOUSE Heat shock factor-binding protein 1 - Mus mus... 56 7e-08
5Q8K3X8:HSBP1_RAT Heat shock factor-binding protein 1 - Rattus no... 54 3e-07
6P34333:GEI8_CAEEL Gex-3-interacting protein 8 - Caenorhabditis e... 36 0.094
7O14330:YB7F_SCHPO Uncharacterized protein C16E9.15 - Schizosacch... 34 0.36
8O14976:GAK_HUMAN Cyclin G-associated kinase - Homo sapiens (Human) 33 0.79
9P25003:COX3_PISOC Cytochrome c oxidase subunit 3 - Pisaster ochr... 32 1.8
10Q5XI07:LPP_RAT Lipoma-preferred partner homolog - Rattus norvegi... 31 2.3
11P06159:NCAP_PI3H4 Nucleoprotein - Human parainfluenza 3 virus (s... 31 3.0
12Q33824:COX3_ASTPE Cytochrome c oxidase subunit 3 - Asterina pect... 31 3.0
13Q10172:YDC9_SCHPO Uncharacterized protein C25G10.09c - Schizosac... 30 3.9
14Q8BFW7:LPP_MOUSE Lipoma-preferred partner homolog - Mus musculus... 30 3.9
15O10270:VP61_NPVOP 61 kDa protein homolog - Orgyia pseudotsugata ... 30 6.7
16Q9RY24:GRPE_DEIRA Protein grpE - Deinococcus radiodurans 30 6.7
17Q6INV8:Z652B_XENLA Zinc finger protein 652-B - Xenopus laevis (A... 29 8.8
18Q09442:SF3B4_CAEEL Splicing factor 3B subunit 4 - Caenorhabditis... 29 8.8
19Q810T2:CCNB3_MOUSE G2/mitotic-specific cyclin-B3 - Mus musculus ... 29 8.8
20Q9UPA5:BSN_HUMAN Protein bassoon - Homo sapiens (Human) 29 8.8
21Q05193:DYN1_HUMAN Dynamin-1 - Homo sapiens (Human) 29 8.9

>Q5RDI2:HSBP1_PONPY Heat shock factor-binding protein 1 - Pongo pygmaeus (Orangutan)|
          Length = 76
 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 28/54 (51%), Positives = 40/54 (74%)
 Frame = +3

Query: 159 QSTADMTAFVQNLLVQMQTRFQTMSENIITKIDEMGARIDELELSINDLKAEMG 320
           ++  D+T+ VQ LL QMQ +FQTMS+ II +ID+M +RID+LE +I DL  + G
Sbjct: 7   KTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAG 60



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>O75506:HSBP1_HUMAN Heat shock factor-binding protein 1 - Homo sapiens (Human)|
          Length = 76

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 28/54 (51%), Positives = 40/54 (74%)
 Frame = +3

Query: 159 QSTADMTAFVQNLLVQMQTRFQTMSENIITKIDEMGARIDELELSINDLKAEMG 320
           ++  D+T+ VQ LL QMQ +FQTMS+ II +ID+M +RID+LE +I DL  + G
Sbjct: 7   KTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAG 60



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>Q3ZC22:HSBP1_BOVIN Heat shock factor-binding protein 1 - Bos taurus (Bovine)|
          Length = 76

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 28/54 (51%), Positives = 40/54 (74%)
 Frame = +3

Query: 159 QSTADMTAFVQNLLVQMQTRFQTMSENIITKIDEMGARIDELELSINDLKAEMG 320
           ++  D+T+ VQ LL QMQ +FQTMS+ II +ID+M +RID+LE +I DL  + G
Sbjct: 7   KTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAG 60



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>Q9CQZ1:HSBP1_MOUSE Heat shock factor-binding protein 1 - Mus musculus (Mouse)|
          Length = 76

 Score = 56.2 bits (134), Expect = 7e-08
 Identities = 27/56 (48%), Positives = 39/56 (69%)
 Frame = +3

Query: 171 DMTAFVQNLLVQMQTRFQTMSENIITKIDEMGARIDELELSINDLKAEMGSDGMTP 338
           D+T  V+ LL QMQ +FQ MS+ II +ID+M +RID+LE +I DL  + G + + P
Sbjct: 11  DITLVVETLLQQMQDKFQIMSDQIIGRIDDMSSRIDDLEKNIADLMTQAGVEELDP 66



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>Q8K3X8:HSBP1_RAT Heat shock factor-binding protein 1 - Rattus norvegicus (Rat)|
          Length = 76

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 26/50 (52%), Positives = 36/50 (72%)
 Frame = +3

Query: 171 DMTAFVQNLLVQMQTRFQTMSENIITKIDEMGARIDELELSINDLKAEMG 320
           D+T  V+ LL QMQ +FQ MS+ II +ID+M +RID+LE +I DL  + G
Sbjct: 11  DITLVVETLLQQMQDKFQIMSDQIIGRIDDMSSRIDDLEKNIADLMTQAG 60



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>P34333:GEI8_CAEEL Gex-3-interacting protein 8 - Caenorhabditis elegans|
          Length = 1780

 Score = 35.8 bits (81), Expect = 0.094
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 225 TMSENIITKIDEMGARIDELELSINDLKAEMGSDGMTPTKVKDEESKPAD 374
           T ++ +   ++++G  IDE+E+  ND  A  GS G       D +  PAD
Sbjct: 555 TRAQAVPKPVEDLGEEIDEMEIEDNDEDASRGSRGKDSKAPSDRDGSPAD 604



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>O14330:YB7F_SCHPO Uncharacterized protein C16E9.15 - Schizosaccharomyces pombe|
           (Fission yeast)
          Length = 75

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +3

Query: 159 QSTADMTAFVQNLLVQMQTRFQTMSENIITKIDEMGARIDELELSIND 302
           QST+ +T     LL  +   F+T+ +    K++ M  R+D+LE S+ +
Sbjct: 13  QSTSAITTLTDKLLEDISGDFETLQKQFSEKLETMSTRLDQLEESMRE 60



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>O14976:GAK_HUMAN Cyclin G-associated kinase - Homo sapiens (Human)|
          Length = 1311

 Score = 32.7 bits (73), Expect = 0.79
 Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
 Frame = +3

Query: 90   STMASSNSGGIPIKAEQDSDGSAQSTADMTAFVQNLLVQMQTRFQTMSENIITKIDEMGA 269
            ST       G P     DSD    S+AD + F+  L  Q +   +T +EN  +K  E   
Sbjct: 760  STAQYDAGAGSPEAEPTDSDSPPSSSADASRFLHTLDWQEEKEAETGAENASSKESESAL 819

Query: 270  RIDELELSINDL-KAEMGSDGMTP 338
              D  E  ++D   + + S+G  P
Sbjct: 820  MEDRDESEVSDEGGSPISSEGQEP 843



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>P25003:COX3_PISOC Cytochrome c oxidase subunit 3 - Pisaster ochraceus (Sea star)|
          Length = 260

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -2

Query: 377 AVCWL*FFVLHFSRGHTIAAHFSLEVVDAQLQFIDSCTHFIYLC 246
           AVC L  +  HFS  H    HF  E       F+D    F+Y+C
Sbjct: 215 AVCLLRLYNFHFSNHH----HFGFEAASWYWHFVDVVWLFLYIC 254



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>Q5XI07:LPP_RAT Lipoma-preferred partner homolog - Rattus norvegicus (Rat)|
          Length = 632

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
 Frame = +2

Query: 29  IPKPQPRLTTSGSVPA------PPPAVDHGVFQLRRHPHQGRT 139
           +P P P L   G++P+      PPP +D G F ++R    G+T
Sbjct: 68  LPPPPPPLEDPGTIPSGSGHFPPPPPLDEGAFIVQRGNPGGKT 110



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>P06159:NCAP_PI3H4 Nucleoprotein - Human parainfluenza 3 virus (strain Wash/47885/57)|
           (HPIV-3) (Human parainfluenza 3 virus (strain NIH
           47885))
          Length = 515

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 21/77 (27%), Positives = 36/77 (46%)
 Frame = +3

Query: 129 KAEQDSDGSAQSTADMTAFVQNLLVQMQTRFQTMSENIITKIDEMGARIDELELSINDLK 308
           +A+Q+ DG  QS+    A+ +      +T   T S+NI  K ++   R D L   +ND K
Sbjct: 430 RADQEQDGEPQSSIIQYAWAEGNRSDDRTEQATESDNI--KTEQQNIR-DRLNKRLNDKK 486

Query: 309 AEMGSDGMTPTKVKDEE 359
            +       PT   +++
Sbjct: 487 KQGSQPSTNPTNRTNQD 503



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>Q33824:COX3_ASTPE Cytochrome c oxidase subunit 3 - Asterina pectinifera (Starfish)|
          Length = 260

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -2

Query: 374 VCWL*FFVLHFSRGHTIAAHFSLEVVDAQLQFIDSCTHFIYLC 246
           +C+L     HFS  H    HF  E       F+D    F+Y+C
Sbjct: 216 ICFLRLITFHFSNNH----HFGFEAAAWYWHFVDVVWLFLYIC 254



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>Q10172:YDC9_SCHPO Uncharacterized protein C25G10.09c - Schizosaccharomyces pombe|
            (Fission yeast)
          Length = 1794

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = +2

Query: 23   PRIP-KPQPRLTTSGSVPAPPPAVDHGVFQLRRHPHQGRTGFGRLRPEHR*YDCFCAKSS 199
            P +P  P+P++  S +V APPP V      +   P           PE R  D F + SS
Sbjct: 1359 PAVPTSPKPQIPDSSNVHAPPPPVQ----PMNAMPSHNAVNARPSAPERR--DSFGSVSS 1412

Query: 200  SSDANQVPD 226
             S+ + + D
Sbjct: 1413 GSNVSSIED 1421



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>Q8BFW7:LPP_MOUSE Lipoma-preferred partner homolog - Mus musculus (Mouse)|
          Length = 613

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
 Frame = +2

Query: 29  IPKPQPRLTTSGSVPA------PPPAVDHGVFQLRRHPHQGRT 139
           +P P P L   G++P       PPP +D G F++++    G+T
Sbjct: 68  LPPPPPPLEDPGTIPPGPGHFPPPPPLDEGAFKVQQGNPGGKT 110



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>O10270:VP61_NPVOP 61 kDa protein homolog - Orgyia pseudotsugata multicapsid|
           polyhedrosis virus (OpMNPV)
          Length = 474

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 2   AAILTFLPRIPKPQPRLTTSGSVPAPPPAVD 94
           A + T +P  P P P    + S+P PPP VD
Sbjct: 275 ADVTTSMPPPPPPFPSADVTTSMPPPPPMVD 305



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>Q9RY24:GRPE_DEIRA Protein grpE - Deinococcus radiodurans|
          Length = 221

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +3

Query: 204 QMQTRFQTMSENIITKIDEMGA---RIDELELSINDLKAEMG 320
           +M   F  M EN+  ++ EM A   R+DELE    DLK  +G
Sbjct: 52  EMPEGFPEMDENMFGQVQEMMAKLERVDELEKENADLKNRLG 93



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>Q6INV8:Z652B_XENLA Zinc finger protein 652-B - Xenopus laevis (African clawed frog)|
          Length = 602

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +2

Query: 32  PKPQPRLTTSGSVPAPPPAVDHGVFQLRRHPH 127
           P P P L  +   P PP  + H    L  HPH
Sbjct: 521 PSPTPPLNLNALNPLPPRPIPHPFSHLHLHPH 552



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>Q09442:SF3B4_CAEEL Splicing factor 3B subunit 4 - Caenorhabditis elegans|
          Length = 388

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = +2

Query: 32  PKPQPRLTTSGSVPAPPPAVDHGVFQLRRHPHQGRT 139
           P P P   T G  P PPP    G++     P  GRT
Sbjct: 272 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRT 307



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>Q810T2:CCNB3_MOUSE G2/mitotic-specific cyclin-B3 - Mus musculus (Mouse)|
          Length = 1396

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 21/74 (28%), Positives = 34/74 (45%)
 Frame = +3

Query: 147  DGSAQSTADMTAFVQNLLVQMQTRFQTMSENIITKIDEMGARIDELELSINDLKAEMGSD 326
            DG  + T+DM A + + LV++Q  FQ   E +   +  M   + + +   N L+    + 
Sbjct: 1157 DGQMELTSDMRAILVDWLVEIQGSFQMTHETLYLAVKIMDLYLMKAQCKKNHLQLLGSTT 1216

Query: 327  GMTPTKVKDEESKP 368
             M   K   EES P
Sbjct: 1217 YMIAAKF--EESYP 1228



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>Q9UPA5:BSN_HUMAN Protein bassoon - Homo sapiens (Human)|
          Length = 3926

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +2

Query: 62  GSVPAPPPAVDHGVFQLRRHPHQGRTGFGRLRPE 163
           G  P P P+ +      RR PH   TG+  L PE
Sbjct: 878 GPRPRPEPSQEPAALPKRRLPHNATTGYEELLPE 911



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>Q05193:DYN1_HUMAN Dynamin-1 - Homo sapiens (Human)|
          Length = 864

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
 Frame = +1

Query: 7   NPHILTENPQTPTPTDDEW--ICSGASSRRRPWRLPT-----PAASPSRP 135
           N +  T +   P P DD W  + S  + RR P   PT     PA  P+RP
Sbjct: 744 NINTTTVSTPMPPPVDDSWLQVQSVPAGRRSPTSSPTPQRRAPAVPPARP 793


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 90,060,713
Number of extensions: 1991817
Number of successful extensions: 7141
Number of sequences better than 10.0: 21
Number of HSP's gapped: 7083
Number of HSP's successfully gapped: 21
Length of query: 178
Length of database: 100,686,439
Length adjustment: 106
Effective length of query: 72
Effective length of database: 71,611,169
Effective search space: 5156004168
Effective search space used: 5156004168
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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