Clone Name | FLbaf8i13 |
---|---|
Clone Library Name | barley_pub |
>Q5RDI2:HSBP1_PONPY Heat shock factor-binding protein 1 - Pongo pygmaeus (Orangutan)| Length = 76 Score = 58.9 bits (141), Expect = 1e-08 Identities = 28/54 (51%), Positives = 40/54 (74%) Frame = +3 Query: 159 QSTADMTAFVQNLLVQMQTRFQTMSENIITKIDEMGARIDELELSINDLKAEMG 320 ++ D+T+ VQ LL QMQ +FQTMS+ II +ID+M +RID+LE +I DL + G Sbjct: 7 KTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAG 60
>O75506:HSBP1_HUMAN Heat shock factor-binding protein 1 - Homo sapiens (Human)| Length = 76 Score = 58.9 bits (141), Expect = 1e-08 Identities = 28/54 (51%), Positives = 40/54 (74%) Frame = +3 Query: 159 QSTADMTAFVQNLLVQMQTRFQTMSENIITKIDEMGARIDELELSINDLKAEMG 320 ++ D+T+ VQ LL QMQ +FQTMS+ II +ID+M +RID+LE +I DL + G Sbjct: 7 KTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAG 60
>Q3ZC22:HSBP1_BOVIN Heat shock factor-binding protein 1 - Bos taurus (Bovine)| Length = 76 Score = 58.9 bits (141), Expect = 1e-08 Identities = 28/54 (51%), Positives = 40/54 (74%) Frame = +3 Query: 159 QSTADMTAFVQNLLVQMQTRFQTMSENIITKIDEMGARIDELELSINDLKAEMG 320 ++ D+T+ VQ LL QMQ +FQTMS+ II +ID+M +RID+LE +I DL + G Sbjct: 7 KTVQDLTSVVQTLLQQMQDKFQTMSDQIIGRIDDMSSRIDDLEKNIADLMTQAG 60
>Q9CQZ1:HSBP1_MOUSE Heat shock factor-binding protein 1 - Mus musculus (Mouse)| Length = 76 Score = 56.2 bits (134), Expect = 7e-08 Identities = 27/56 (48%), Positives = 39/56 (69%) Frame = +3 Query: 171 DMTAFVQNLLVQMQTRFQTMSENIITKIDEMGARIDELELSINDLKAEMGSDGMTP 338 D+T V+ LL QMQ +FQ MS+ II +ID+M +RID+LE +I DL + G + + P Sbjct: 11 DITLVVETLLQQMQDKFQIMSDQIIGRIDDMSSRIDDLEKNIADLMTQAGVEELDP 66
>Q8K3X8:HSBP1_RAT Heat shock factor-binding protein 1 - Rattus norvegicus (Rat)| Length = 76 Score = 53.9 bits (128), Expect = 3e-07 Identities = 26/50 (52%), Positives = 36/50 (72%) Frame = +3 Query: 171 DMTAFVQNLLVQMQTRFQTMSENIITKIDEMGARIDELELSINDLKAEMG 320 D+T V+ LL QMQ +FQ MS+ II +ID+M +RID+LE +I DL + G Sbjct: 11 DITLVVETLLQQMQDKFQIMSDQIIGRIDDMSSRIDDLEKNIADLMTQAG 60
>P34333:GEI8_CAEEL Gex-3-interacting protein 8 - Caenorhabditis elegans| Length = 1780 Score = 35.8 bits (81), Expect = 0.094 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +3 Query: 225 TMSENIITKIDEMGARIDELELSINDLKAEMGSDGMTPTKVKDEESKPAD 374 T ++ + ++++G IDE+E+ ND A GS G D + PAD Sbjct: 555 TRAQAVPKPVEDLGEEIDEMEIEDNDEDASRGSRGKDSKAPSDRDGSPAD 604
>O14330:YB7F_SCHPO Uncharacterized protein C16E9.15 - Schizosaccharomyces pombe| (Fission yeast) Length = 75 Score = 33.9 bits (76), Expect = 0.36 Identities = 15/48 (31%), Positives = 27/48 (56%) Frame = +3 Query: 159 QSTADMTAFVQNLLVQMQTRFQTMSENIITKIDEMGARIDELELSIND 302 QST+ +T LL + F+T+ + K++ M R+D+LE S+ + Sbjct: 13 QSTSAITTLTDKLLEDISGDFETLQKQFSEKLETMSTRLDQLEESMRE 60
>O14976:GAK_HUMAN Cyclin G-associated kinase - Homo sapiens (Human)| Length = 1311 Score = 32.7 bits (73), Expect = 0.79 Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 1/84 (1%) Frame = +3 Query: 90 STMASSNSGGIPIKAEQDSDGSAQSTADMTAFVQNLLVQMQTRFQTMSENIITKIDEMGA 269 ST G P DSD S+AD + F+ L Q + +T +EN +K E Sbjct: 760 STAQYDAGAGSPEAEPTDSDSPPSSSADASRFLHTLDWQEEKEAETGAENASSKESESAL 819 Query: 270 RIDELELSINDL-KAEMGSDGMTP 338 D E ++D + + S+G P Sbjct: 820 MEDRDESEVSDEGGSPISSEGQEP 843
>P25003:COX3_PISOC Cytochrome c oxidase subunit 3 - Pisaster ochraceus (Sea star)| Length = 260 Score = 31.6 bits (70), Expect = 1.8 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = -2 Query: 377 AVCWL*FFVLHFSRGHTIAAHFSLEVVDAQLQFIDSCTHFIYLC 246 AVC L + HFS H HF E F+D F+Y+C Sbjct: 215 AVCLLRLYNFHFSNHH----HFGFEAASWYWHFVDVVWLFLYIC 254
>Q5XI07:LPP_RAT Lipoma-preferred partner homolog - Rattus norvegicus (Rat)| Length = 632 Score = 31.2 bits (69), Expect = 2.3 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 6/43 (13%) Frame = +2 Query: 29 IPKPQPRLTTSGSVPA------PPPAVDHGVFQLRRHPHQGRT 139 +P P P L G++P+ PPP +D G F ++R G+T Sbjct: 68 LPPPPPPLEDPGTIPSGSGHFPPPPPLDEGAFIVQRGNPGGKT 110
>P06159:NCAP_PI3H4 Nucleoprotein - Human parainfluenza 3 virus (strain Wash/47885/57)| (HPIV-3) (Human parainfluenza 3 virus (strain NIH 47885)) Length = 515 Score = 30.8 bits (68), Expect = 3.0 Identities = 21/77 (27%), Positives = 36/77 (46%) Frame = +3 Query: 129 KAEQDSDGSAQSTADMTAFVQNLLVQMQTRFQTMSENIITKIDEMGARIDELELSINDLK 308 +A+Q+ DG QS+ A+ + +T T S+NI K ++ R D L +ND K Sbjct: 430 RADQEQDGEPQSSIIQYAWAEGNRSDDRTEQATESDNI--KTEQQNIR-DRLNKRLNDKK 486 Query: 309 AEMGSDGMTPTKVKDEE 359 + PT +++ Sbjct: 487 KQGSQPSTNPTNRTNQD 503
>Q33824:COX3_ASTPE Cytochrome c oxidase subunit 3 - Asterina pectinifera (Starfish)| Length = 260 Score = 30.8 bits (68), Expect = 3.0 Identities = 14/43 (32%), Positives = 19/43 (44%) Frame = -2 Query: 374 VCWL*FFVLHFSRGHTIAAHFSLEVVDAQLQFIDSCTHFIYLC 246 +C+L HFS H HF E F+D F+Y+C Sbjct: 216 ICFLRLITFHFSNNH----HFGFEAAAWYWHFVDVVWLFLYIC 254
>Q10172:YDC9_SCHPO Uncharacterized protein C25G10.09c - Schizosaccharomyces pombe| (Fission yeast) Length = 1794 Score = 30.4 bits (67), Expect = 3.9 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Frame = +2 Query: 23 PRIP-KPQPRLTTSGSVPAPPPAVDHGVFQLRRHPHQGRTGFGRLRPEHR*YDCFCAKSS 199 P +P P+P++ S +V APPP V + P PE R D F + SS Sbjct: 1359 PAVPTSPKPQIPDSSNVHAPPPPVQ----PMNAMPSHNAVNARPSAPERR--DSFGSVSS 1412 Query: 200 SSDANQVPD 226 S+ + + D Sbjct: 1413 GSNVSSIED 1421
>Q8BFW7:LPP_MOUSE Lipoma-preferred partner homolog - Mus musculus (Mouse)| Length = 613 Score = 30.4 bits (67), Expect = 3.9 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 6/43 (13%) Frame = +2 Query: 29 IPKPQPRLTTSGSVPA------PPPAVDHGVFQLRRHPHQGRT 139 +P P P L G++P PPP +D G F++++ G+T Sbjct: 68 LPPPPPPLEDPGTIPPGPGHFPPPPPLDEGAFKVQQGNPGGKT 110
>O10270:VP61_NPVOP 61 kDa protein homolog - Orgyia pseudotsugata multicapsid| polyhedrosis virus (OpMNPV) Length = 474 Score = 29.6 bits (65), Expect = 6.7 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +2 Query: 2 AAILTFLPRIPKPQPRLTTSGSVPAPPPAVD 94 A + T +P P P P + S+P PPP VD Sbjct: 275 ADVTTSMPPPPPPFPSADVTTSMPPPPPMVD 305
>Q9RY24:GRPE_DEIRA Protein grpE - Deinococcus radiodurans| Length = 221 Score = 29.6 bits (65), Expect = 6.7 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%) Frame = +3 Query: 204 QMQTRFQTMSENIITKIDEMGA---RIDELELSINDLKAEMG 320 +M F M EN+ ++ EM A R+DELE DLK +G Sbjct: 52 EMPEGFPEMDENMFGQVQEMMAKLERVDELEKENADLKNRLG 93
>Q6INV8:Z652B_XENLA Zinc finger protein 652-B - Xenopus laevis (African clawed frog)| Length = 602 Score = 29.3 bits (64), Expect = 8.8 Identities = 12/32 (37%), Positives = 14/32 (43%) Frame = +2 Query: 32 PKPQPRLTTSGSVPAPPPAVDHGVFQLRRHPH 127 P P P L + P PP + H L HPH Sbjct: 521 PSPTPPLNLNALNPLPPRPIPHPFSHLHLHPH 552
>Q09442:SF3B4_CAEEL Splicing factor 3B subunit 4 - Caenorhabditis elegans| Length = 388 Score = 29.3 bits (64), Expect = 8.8 Identities = 14/36 (38%), Positives = 16/36 (44%) Frame = +2 Query: 32 PKPQPRLTTSGSVPAPPPAVDHGVFQLRRHPHQGRT 139 P P P T G P PPP G++ P GRT Sbjct: 272 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRT 307
>Q810T2:CCNB3_MOUSE G2/mitotic-specific cyclin-B3 - Mus musculus (Mouse)| Length = 1396 Score = 29.3 bits (64), Expect = 8.8 Identities = 21/74 (28%), Positives = 34/74 (45%) Frame = +3 Query: 147 DGSAQSTADMTAFVQNLLVQMQTRFQTMSENIITKIDEMGARIDELELSINDLKAEMGSD 326 DG + T+DM A + + LV++Q FQ E + + M + + + N L+ + Sbjct: 1157 DGQMELTSDMRAILVDWLVEIQGSFQMTHETLYLAVKIMDLYLMKAQCKKNHLQLLGSTT 1216 Query: 327 GMTPTKVKDEESKP 368 M K EES P Sbjct: 1217 YMIAAKF--EESYP 1228
>Q9UPA5:BSN_HUMAN Protein bassoon - Homo sapiens (Human)| Length = 3926 Score = 29.3 bits (64), Expect = 8.8 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = +2 Query: 62 GSVPAPPPAVDHGVFQLRRHPHQGRTGFGRLRPE 163 G P P P+ + RR PH TG+ L PE Sbjct: 878 GPRPRPEPSQEPAALPKRRLPHNATTGYEELLPE 911
>Q05193:DYN1_HUMAN Dynamin-1 - Homo sapiens (Human)| Length = 864 Score = 29.3 bits (64), Expect = 8.9 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 7/50 (14%) Frame = +1 Query: 7 NPHILTENPQTPTPTDDEW--ICSGASSRRRPWRLPT-----PAASPSRP 135 N + T + P P DD W + S + RR P PT PA P+RP Sbjct: 744 NINTTTVSTPMPPPVDDSWLQVQSVPAGRRSPTSSPTPQRRAPAVPPARP 793 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 90,060,713 Number of extensions: 1991817 Number of successful extensions: 7141 Number of sequences better than 10.0: 21 Number of HSP's gapped: 7083 Number of HSP's successfully gapped: 21 Length of query: 178 Length of database: 100,686,439 Length adjustment: 106 Effective length of query: 72 Effective length of database: 71,611,169 Effective search space: 5156004168 Effective search space used: 5156004168 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)