ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf8i09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001072730.1| Oryza sativa (japonica cultivar-group) Os12g0156400 (Os12g0156400) mRNA, complete cds Length = 1545 Score = 557 bits (281), Expect = e-155 Identities = 452/509 (88%) Strand = Plus / Plus Query: 133 gggggcaagttgaccccaaacctggcgatggacgccgagggcacgcgcctgctcaacctc 192 ||||| ||| |||| || ||||||||||||||||| ||||| ||||| |||||||||||| Sbjct: 105 ggggggaaggtgacgccgaacctggcgatggacgcggaggggacgcggctgctcaacctc 164 Query: 193 accgtcctgcagcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccacgtc 252 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 165 accgtgctgcagcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccacgtc 224 Query: 253 accctctatgacttcaacatcgacctcaatcagtggagccgcaaggacgtggaggggtcg 312 || ||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||| ||| Sbjct: 225 acgctctacgacttcaacatcgagctcaaccagtggagccggaaggacgtcgagggatcg 284 Query: 313 ctgttcgtcgtaaagaggaacacgcagccaaggtttcagtttatcgtcatgaacaggcgg 372 |||||||| || |||||||||| |||||| ||||| ||||| ||||||||||||||||| Sbjct: 285 ctgttcgtggtgaagaggaacaagcagccgaggttccagttcatcgtcatgaacaggcgt 344 Query: 373 aacacggataatctggtggaggatttattaagtgattttgaatacgaacttcaacctcca 432 ||||| |||||||| ||||||||| |||| ||||| ||||||| |||||||| ||||| Sbjct: 345 aacaccgataatctcgtggaggatctattgagtgactttgaatttgaacttcagcctccg 404 Query: 433 tatttgctgtaccggaatgctgcacaagaagtaaatggtatttggttttacaatcagcaa 492 |||||| | ||||| |||||||||||||||||||| |||||||||||||| || || ||| Sbjct: 405 tatttgttataccgaaatgctgcacaagaagtaaacggtatttggttttataaccaacaa 464 Query: 493 gactgtgatgctgtagcaaatctttttggaaggatactgaatgcctatgccagagtacct 552 |||||||||||||| ||| | |||||||||||||| ||||||| || |||| ||| ||| Sbjct: 465 gactgtgatgctgttgcaggtgtttttggaaggatattgaatgcttacgccaaagtgcct 524 Query: 553 ccaaaagcgaaagtgccttctaccaaaagtgagtttgaggaattggaggctgttcctacg 612 ||||| | ||||| ||||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 525 ccaaagcccaaagtaccttccacaaaaagtgagtttgaggaattggaagctgttcctaca 584 Query: 613 tctgccgctatagatggcccccttgaacc 641 || || ||||||||||||||||||||||| Sbjct: 585 tccgctgctatagatggcccccttgaacc 613 Score = 77.8 bits (39), Expect = 1e-10 Identities = 99/119 (83%) Strand = Plus / Plus Query: 1094 cccctgcacacaacaatgactctcttatttcacgggataaagttaaggatgcccttctga 1153 |||||| ||||||| |||| || ||||||| ||||||||||||| ||||| || |||| Sbjct: 1069 cccctgtacacaacgatgagcctgttatttcgagggataaagttaaagatgctctcctga 1128 Query: 1154 gacttgttcagaatgaccaattcatcgatttaatttaccgggagttgcagaatgcacat 1212 | ||||||||||| ||| |||||||| |||| | || | |||||| |||||||||||| Sbjct: 1129 ggcttgttcagaacgacgaattcatcaatttgctctatcaggagttacagaatgcacat 1187 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 890 ctagccattcaacaaatcttgtaacaccggcattctttgcccctccatcgtcctcttctg 949 ||||||| ||||||||||||||||| || || || ||||| ||||| || || ||||||| Sbjct: 865 ctagccactcaacaaatcttgtaactccagccttttttgcacctccctcatcgtcttctg 924 Query: 950 catca 954 ||||| Sbjct: 925 catca 929 Score = 52.0 bits (26), Expect = 0.006 Identities = 36/38 (94%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 1328 ttgatgtaga-ttcttatagcaatggctggtagtattt 1364 |||||||||| || |||||||||||||||||||||||| Sbjct: 1355 ttgatgtagagtttttatagcaatggctggtagtattt 1392
>dbj|AK099278.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125D09, full insert sequence Length = 1546 Score = 557 bits (281), Expect = e-155 Identities = 452/509 (88%) Strand = Plus / Plus Query: 133 gggggcaagttgaccccaaacctggcgatggacgccgagggcacgcgcctgctcaacctc 192 ||||| ||| |||| || ||||||||||||||||| ||||| ||||| |||||||||||| Sbjct: 106 ggggggaaggtgacgccgaacctggcgatggacgcggaggggacgcggctgctcaacctc 165 Query: 193 accgtcctgcagcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccacgtc 252 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 166 accgtgctgcagcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccacgtc 225 Query: 253 accctctatgacttcaacatcgacctcaatcagtggagccgcaaggacgtggaggggtcg 312 || ||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||| ||| Sbjct: 226 acgctctacgacttcaacatcgagctcaaccagtggagccggaaggacgtcgagggatcg 285 Query: 313 ctgttcgtcgtaaagaggaacacgcagccaaggtttcagtttatcgtcatgaacaggcgg 372 |||||||| || |||||||||| |||||| ||||| ||||| ||||||||||||||||| Sbjct: 286 ctgttcgtggtgaagaggaacaagcagccgaggttccagttcatcgtcatgaacaggcgt 345 Query: 373 aacacggataatctggtggaggatttattaagtgattttgaatacgaacttcaacctcca 432 ||||| |||||||| ||||||||| |||| ||||| ||||||| |||||||| ||||| Sbjct: 346 aacaccgataatctcgtggaggatctattgagtgactttgaatttgaacttcagcctccg 405 Query: 433 tatttgctgtaccggaatgctgcacaagaagtaaatggtatttggttttacaatcagcaa 492 |||||| | ||||| |||||||||||||||||||| |||||||||||||| || || ||| Sbjct: 406 tatttgttataccgaaatgctgcacaagaagtaaacggtatttggttttataaccaacaa 465 Query: 493 gactgtgatgctgtagcaaatctttttggaaggatactgaatgcctatgccagagtacct 552 |||||||||||||| ||| | |||||||||||||| ||||||| || |||| ||| ||| Sbjct: 466 gactgtgatgctgttgcaggtgtttttggaaggatattgaatgcttacgccaaagtgcct 525 Query: 553 ccaaaagcgaaagtgccttctaccaaaagtgagtttgaggaattggaggctgttcctacg 612 ||||| | ||||| ||||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 526 ccaaagcccaaagtaccttccacaaaaagtgagtttgaggaattggaagctgttcctaca 585 Query: 613 tctgccgctatagatggcccccttgaacc 641 || || ||||||||||||||||||||||| Sbjct: 586 tccgctgctatagatggcccccttgaacc 614 Score = 77.8 bits (39), Expect = 1e-10 Identities = 99/119 (83%) Strand = Plus / Plus Query: 1094 cccctgcacacaacaatgactctcttatttcacgggataaagttaaggatgcccttctga 1153 |||||| ||||||| |||| || ||||||| ||||||||||||| ||||| || |||| Sbjct: 1070 cccctgtacacaacgatgagcctgttatttcgagggataaagttaaagatgctctcctga 1129 Query: 1154 gacttgttcagaatgaccaattcatcgatttaatttaccgggagttgcagaatgcacat 1212 | ||||||||||| ||| |||||||| |||| | || | |||||| |||||||||||| Sbjct: 1130 ggcttgttcagaacgacgaattcatcaatttgctctatcaggagttacagaatgcacat 1188 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 890 ctagccattcaacaaatcttgtaacaccggcattctttgcccctccatcgtcctcttctg 949 ||||||| ||||||||||||||||| || || || ||||| ||||| || || ||||||| Sbjct: 866 ctagccactcaacaaatcttgtaactccagccttttttgcacctccctcatcgtcttctg 925 Query: 950 catca 954 ||||| Sbjct: 926 catca 930 Score = 52.0 bits (26), Expect = 0.006 Identities = 36/38 (94%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 1328 ttgatgtaga-ttcttatagcaatggctggtagtattt 1364 |||||||||| || |||||||||||||||||||||||| Sbjct: 1356 ttgatgtagagtttttatagcaatggctggtagtattt 1393
>dbj|AK072086.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116L20, full insert sequence Length = 1485 Score = 557 bits (281), Expect = e-155 Identities = 452/509 (88%) Strand = Plus / Plus Query: 133 gggggcaagttgaccccaaacctggcgatggacgccgagggcacgcgcctgctcaacctc 192 ||||| ||| |||| || ||||||||||||||||| ||||| ||||| |||||||||||| Sbjct: 115 ggggggaaggtgacgccgaacctggcgatggacgcggaggggacgcggctgctcaacctc 174 Query: 193 accgtcctgcagcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccacgtc 252 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175 accgtgctgcagcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccacgtc 234 Query: 253 accctctatgacttcaacatcgacctcaatcagtggagccgcaaggacgtggaggggtcg 312 || ||||| |||||||||||||| ||||| ||||||||||| |||||||| ||||| ||| Sbjct: 235 acgctctacgacttcaacatcgagctcaaccagtggagccggaaggacgtcgagggatcg 294 Query: 313 ctgttcgtcgtaaagaggaacacgcagccaaggtttcagtttatcgtcatgaacaggcgg 372 |||||||| || |||||||||| |||||| ||||| ||||| ||||||||||||||||| Sbjct: 295 ctgttcgtggtgaagaggaacaagcagccgaggttccagttcatcgtcatgaacaggcgt 354 Query: 373 aacacggataatctggtggaggatttattaagtgattttgaatacgaacttcaacctcca 432 ||||| |||||||| ||||||||| |||| ||||| ||||||| |||||||| ||||| Sbjct: 355 aacaccgataatctcgtggaggatctattgagtgactttgaatttgaacttcagcctccg 414 Query: 433 tatttgctgtaccggaatgctgcacaagaagtaaatggtatttggttttacaatcagcaa 492 |||||| | ||||| |||||||||||||||||||| |||||||||||||| || || ||| Sbjct: 415 tatttgttataccgaaatgctgcacaagaagtaaacggtatttggttttataaccaacaa 474 Query: 493 gactgtgatgctgtagcaaatctttttggaaggatactgaatgcctatgccagagtacct 552 |||||||||||||| ||| | |||||||||||||| ||||||| || |||| ||| ||| Sbjct: 475 gactgtgatgctgttgcaggtgtttttggaaggatattgaatgcttacgccaaagtgcct 534 Query: 553 ccaaaagcgaaagtgccttctaccaaaagtgagtttgaggaattggaggctgttcctacg 612 ||||| | ||||| ||||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 535 ccaaagcccaaagtaccttccacaaaaagtgagtttgaggaattggaagctgttcctaca 594 Query: 613 tctgccgctatagatggcccccttgaacc 641 || || ||||||||||||||||||||||| Sbjct: 595 tccgctgctatagatggcccccttgaacc 623 Score = 77.8 bits (39), Expect = 1e-10 Identities = 99/119 (83%) Strand = Plus / Plus Query: 1094 cccctgcacacaacaatgactctcttatttcacgggataaagttaaggatgcccttctga 1153 |||||| ||||||| |||| || ||||||| ||||||||||||| ||||| || |||| Sbjct: 1079 cccctgtacacaacgatgagcctgttatttcgagggataaagttaaagatgctctcctga 1138 Query: 1154 gacttgttcagaatgaccaattcatcgatttaatttaccgggagttgcagaatgcacat 1212 | ||||||||||| ||| |||||||| |||| | || | |||||| |||||||||||| Sbjct: 1139 ggcttgttcagaacgacgaattcatcaatttgctctatcaggagttacagaatgcacat 1197 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 890 ctagccattcaacaaatcttgtaacaccggcattctttgcccctccatcgtcctcttctg 949 ||||||| ||||||||||||||||| || || || ||||| ||||| || || ||||||| Sbjct: 875 ctagccactcaacaaatcttgtaactccagccttttttgcacctccctcatcgtcttctg 934 Query: 950 catca 954 ||||| Sbjct: 935 catca 939 Score = 52.0 bits (26), Expect = 0.006 Identities = 36/38 (94%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 1328 ttgatgtaga-ttcttatagcaatggctggtagtattt 1364 |||||||||| || |||||||||||||||||||||||| Sbjct: 1365 ttgatgtagagtttttatagcaatggctggtagtattt 1402
>gb|DQ246193.1| Zea mays clone 15841 mRNA sequence Length = 1436 Score = 547 bits (276), Expect = e-152 Identities = 450/508 (88%) Strand = Plus / Plus Query: 134 ggggcaagttgaccccaaacctggcgatggacgccgagggcacgcgcctgctcaacctca 193 |||| ||| ||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 1 gggggaaggtgaccccgaacctggcgatggacgccgaggccacgcgcatgctcaacctca 60 Query: 194 ccgtcctgcagcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccacgtca 253 | ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 61 cagtcctccagcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcgcacgtca 120 Query: 254 ccctctatgacttcaacatcgacctcaatcagtggagccgcaaggacgtggaggggtcgc 313 | ||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 121 ctctctacgacttcaacatcgacctcaaccagtggagccgcaaggacgtggaagggtcgc 180 Query: 314 tgttcgtcgtaaagaggaacacgcagccaaggtttcagtttatcgtcatgaacaggcgga 373 |||||||||| ||||||||| | ||||| ||||| || || || ||||| |||||||| | Sbjct: 181 tgttcgtcgtcaagaggaactcccagccgaggttccaattcattgtcataaacaggcgca 240 Query: 374 acacggataatctggtggaggatttattaagtgattttgaatacgaacttcaacctccat 433 |||| |||||| ||||||||||||||||||| ||||||||||| |||||||| || |||| Sbjct: 241 acactgataatttggtggaggatttattaagcgattttgaatatgaacttcagccaccat 300 Query: 434 atttgctgtaccggaatgctgcacaagaagtaaatggtatttggttttacaatcagcaag 493 ||||||||||||| |||||| | |||||||||||||||||||||||||| || || || | Sbjct: 301 atttgctgtaccgaaatgcttcccaagaagtaaatggtatttggttttataaccaacatg 360 Query: 494 actgtgatgctgtagcaaatctttttggaaggatactgaatgcctatgccagagtacctc 553 | ||||| ||||| |||| ||||||||||| ||| ||||||| ||||| | || |||| Sbjct: 361 attgtgaagctgtcgcaagcctttttggaagaatattgaatgcttatgcaaaggtgcctc 420 Query: 554 caaaagcgaaagtgccttctaccaaaagtgagtttgaggaattggaggctgttcctacgt 613 ||||| | ||||||||| | || |||||||||||||| ||| ||||||||||||| || | Sbjct: 421 caaaaccaaaagtgcctaccacaaaaagtgagtttgaagaactggaggctgttccaacat 480 Query: 614 ctgccgctatagatggcccccttgaacc 641 |||| ||||||||||||||||| ||||| Sbjct: 481 ctgctgctatagatggccccctggaacc 508 Score = 79.8 bits (40), Expect = 3e-11 Identities = 81/92 (88%), Gaps = 2/92 (2%) Strand = Plus / Plus Query: 1094 cccctgcacacaacaatg-actctcttatttcacgggataaagttaaggatgcccttctg 1152 |||||||||||||| ||| ||| | |||||||| |||||||||||||||| |||| | | Sbjct: 958 cccctgcacacaacgatggact-tgttatttcaagggataaagttaaggacaccctccag 1016 Query: 1153 agacttgttcagaatgaccaattcatcgattt 1184 |||||||||||||||||| | ||||||||||| Sbjct: 1017 agacttgttcagaatgacgagttcatcgattt 1048 Score = 67.9 bits (34), Expect = 1e-07 Identities = 49/54 (90%) Strand = Plus / Plus Query: 976 atgatgcccacagcaccacctcttcatgcaacttcatcatctgctcaacatcct 1029 |||||||| |||||||||||||||||| | |||||| || |||||||||||||| Sbjct: 846 atgatgcctacagcaccacctcttcatccgacttcaacagctgctcaacatcct 899
>gb|AY109088.1| Zea mays PCO062740 mRNA sequence Length = 822 Score = 490 bits (247), Expect = e-135 Identities = 426/482 (88%), Gaps = 3/482 (0%) Strand = Plus / Plus Query: 130 aacgggggcaagttgaccccaaacctggcgatggacgccgagggcacgcgcctgctcaac 189 |||||||||||| ||||||| ||||||||||||||||| |||| |||||||||||||||| Sbjct: 112 aacgggggcaaggtgaccccgaacctggcgatggacgcggaggccacgcgcctgctcaac 171 Query: 190 ctcaccgtcctgcagcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccac 249 ||||| || || |||||| | ||||||||||||||||||||||| ||||||||||| ||| Sbjct: 172 ctcacggtgctccagcgcttggaccccgccgtcgaggacatccttatcaccgccgcgcac 231 Query: 250 gtcaccctctatgacttcaacatcgacctcaatcagtggagccgcaaggacgtggagggg 309 ||||| ||||| || ||||||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 232 gtcacactctacgatttcaacatcgacctcaaccagtggagccggaaggacgtcgagggg 291 Query: 310 tcgctgttcgtcgtaaagaggaacacgcagccaaggtttcagtttatcgtcatgaacagg 369 |||||||| ||||| ||||||||| | ||||| | || ||||| |||||||||||| || Sbjct: 292 tcgctgtttgtcgtcaagaggaactctcagccccgattccagttcatcgtcatgaaccgg 351 Query: 370 cggaacacggataatctggtggaggatttattaagtgattttgaatacgaacttcaacct 429 || ||||| |||||||||||||||||| | |||||||||||||||||||| ||||||||| Sbjct: 352 cgcaacactgataatctggtggaggatctcttaagtgattttgaatacgagcttcaacct 411 Query: 430 ccatatttgctgtaccggaatgctgcacaagaagtaaatggtatttggttttacaatcag 489 ||||||||| |||||||||| ||| |||||||||| ||||| |||||||||||||| || Sbjct: 412 ccatatttgttgtaccggaacgcttcacaagaagtcaatggaatttggttttacaaccaa 471 Query: 490 caagactgtgatgctgtagcaaatctttttggaaggatactgaatgcctatgccagag-t 548 || |||||||| ||||| |||| ||| |||||||||||||||||||| || |||| || | Sbjct: 472 caggactgtgaagctgttgcaagtctatttggaaggatactgaatgcttacgccaaagtt 531 Query: 549 acct-ccaaaagcgaaagtgcctt-ctaccaaaagtgagtttgaggaattggaggctgtt 606 |||| |||||| | |||||||||| | || |||||||||||||||||| |||| |||||| Sbjct: 532 acctcccaaaacctaaagtgccttcccacaaaaagtgagtttgaggaactggangctgtt 591 Query: 607 cc 608 || Sbjct: 592 cc 593
>gb|AC112209.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0030I09 map C83B, complete sequence Length = 123477 Score = 252 bits (127), Expect = 3e-63 Identities = 151/159 (94%) Strand = Plus / Minus Query: 130 aacgggggcaagttgaccccaaacctggcgatggacgccgagggcacgcgcctgctcaac 189 |||||||| ||| ||||||| |||||| |||||||||||||||||||||| ||||||||| Sbjct: 74287 aacggggggaaggtgaccccgaacctgacgatggacgccgagggcacgcggctgctcaac 74228 Query: 190 ctcaccgtcctgcagcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccac 249 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74227 ctcaccgtgctgcagcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccac 74168 Query: 250 gtcaccctctatgacttcaacatcgacctcaatcagtgg 288 ||||||||||| |||||||||||||||||||| |||||| Sbjct: 74167 gtcaccctctacgacttcaacatcgacctcaaccagtgg 74129 Score = 172 bits (87), Expect = 2e-39 Identities = 132/147 (89%) Strand = Plus / Minus Query: 379 gataatctggtggaggatttattaagtgattttgaatacgaacttcaacctccatatttg 438 |||||||||||||||||| |||| |||||||||||||| |||||||||||||| |||||| Sbjct: 73575 gataatctggtggaggatctattgagtgattttgaatatgaacttcaacctccgtatttg 73516 Query: 439 ctgtaccggaatgctgcacaagaagtaaatggtatttggttttacaatcagcaagactgt 498 ||||||| |||||||| ||||||||||||||||| ||||| |||||||| || ||||| Sbjct: 73515 ttgtaccgcaatgctgcccaagaagtaaatggtatctggttctacaatcaacatgactgc 73456 Query: 499 gatgctgtagcaaatctttttggaagg 525 || ||||| |||| ||||||||||||| Sbjct: 73455 gaagctgttgcaagtctttttggaagg 73429 Score = 105 bits (53), Expect = 5e-19 Identities = 254/321 (79%) Strand = Plus / Minus Query: 704 gtgctgcaagcattggaggtgtatcaagtgggtcaatggttggaagagctcatccatcca 763 ||||||| |||||||| |||| |||| || |||||| |||||| || ||||||||| Sbjct: 71981 gtgctgctagcattggcagtgtctcaaatgctccaatggctggaagggcgcatccatcct 71922 Query: 764 ctgagagcactgcagcttcccacatgccattgattatgccatctgctgcccagtcgcacc 823 ||||||| |||| || |||| |||| ||||| || ||||||||| | | | | || | Sbjct: 71921 ctgagagtgttgcaactccccatgtgcccttgatcattccatctgctactccgacacatc 71862 Query: 824 aaataccccctcctttaggaggttcatcagcgccaccactccccgtgcaggacactaatg 883 |||||||||||||||||| || |||||||| || ||||| ||| | || || ||||||| Sbjct: 71861 aaataccccctcctttagtcggctcatcagctccgccactgcccctccatgatactaatg 71802 Query: 884 cccatgctagccattcaacaaatcttgtaacaccggcattctttgcccctccatcgtcct 943 ||| || || |||| |||||||||||||||| ||||| ||| | ||||| || |||| Sbjct: 71801 tccacactgcccgttcagcaaatcttgtaacaccagcattttttacgcctccgtcatcct 71742 Query: 944 cttctgcatcactagctccgccgatttcgtcaatgatgcccacagcaccacctcttcatg 1003 ||||| ||||| | | || || ||| || |||||||| ||||||||||||||||| Sbjct: 71741 cttctacatcaatggtgcctccagcttcatccatgatgccaacagcaccacctcttcacc 71682 Query: 1004 caacttcatcatctgctcaac 1024 ||||||| |||||||||||| Sbjct: 71681 caacttctgcatctgctcaac 71661 Score = 81.8 bits (41), Expect = 7e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 1162 cagaatgaccaattcatcgatttaatttaccgggagttgcagaatgcacatatgtag 1218 ||||||||||| |||||||||||| | || ||||||||||||||||||||||||||| Sbjct: 71447 cagaatgaccagttcatcgatttagtctatcgggagttgcagaatgcacatatgtag 71391 Score = 81.8 bits (41), Expect = 7e-12 Identities = 104/125 (83%) Strand = Plus / Minus Query: 1040 atggcacccctctactccagccttttccaccacctgcaccgcctccatcttttgcccctg 1099 |||| ||||| |||||||| ||||||||||| || | || ||||||||| || ||||| Sbjct: 71651 atggaacccccctactccaaccttttccaccgccaactccacctccatctcttacccctt 71592 Query: 1100 cacacaacaatgactctcttatttcacgggataaagttaaggatgcccttctgagacttg 1159 || |||| | | || ||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 71591 catacaatgaggggcctattatttcacgggataaagttaaggaagccctcctgagacttg 71532 Query: 1160 ttcag 1164 ||||| Sbjct: 71531 ttcag 71527 Score = 75.8 bits (38), Expect = 4e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 580 agtgagtttgaggaattggaggctgttcctacgtctgccgctatagatggcccccttgaa 639 |||||||| ||||||||||||||||| ||||| ||||| || |||||||| ||||||||| Sbjct: 72284 agtgagttcgaggaattggaggctgtgcctacatctgcagccatagatggtccccttgaa 72225 Query: 640 cc 641 || Sbjct: 72224 cc 72223 Score = 48.1 bits (24), Expect = 0.096 Identities = 48/56 (85%) Strand = Plus / Minus Query: 526 atactgaatgcctatgccagagtacctccaaaagcgaaagtgccttctaccaaaag 581 |||||||| || ||||||| ||| ||||||||| | ||||||||||| || ||||| Sbjct: 72421 atactgaacgcatatgccaaagtgcctccaaaaccaaaagtgccttccacgaaaag 72366 Score = 48.1 bits (24), Expect = 0.096 Identities = 45/52 (86%) Strand = Plus / Minus Query: 328 aggaacacgcagccaaggtttcagtttatcgtcatgaacaggcggaacacgg 379 ||||| || ||||| ||||| ||||| ||||| ||||||||||| ||||||| Sbjct: 73885 aggaatactcagccgaggttccagttcatcgttatgaacaggcgtaacacgg 73834 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 301 gtggaggggtcgctgttcgtcgtaaagagg 330 |||||||||||||||||||| || |||||| Sbjct: 74007 gtggaggggtcgctgttcgttgtgaagagg 73978 Score = 42.1 bits (21), Expect = 6.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 1255 acaagagtgtttctgttctccgtgagttttgtatgct 1291 ||||||||| || |||||| |||||||||||||||| Sbjct: 71356 acaagagtgcttgtgttctttgtgagttttgtatgct 71320
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 252 bits (127), Expect = 3e-63 Identities = 151/159 (94%) Strand = Plus / Plus Query: 130 aacgggggcaagttgaccccaaacctggcgatggacgccgagggcacgcgcctgctcaac 189 |||||||| ||| ||||||| |||||| |||||||||||||||||||||| ||||||||| Sbjct: 2548117 aacggggggaaggtgaccccgaacctgacgatggacgccgagggcacgcggctgctcaac 2548176 Query: 190 ctcaccgtcctgcagcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccac 249 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2548177 ctcaccgtgctgcagcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccac 2548236 Query: 250 gtcaccctctatgacttcaacatcgacctcaatcagtgg 288 ||||||||||| |||||||||||||||||||| |||||| Sbjct: 2548237 gtcaccctctacgacttcaacatcgacctcaaccagtgg 2548275 Score = 172 bits (87), Expect = 2e-39 Identities = 132/147 (89%) Strand = Plus / Plus Query: 379 gataatctggtggaggatttattaagtgattttgaatacgaacttcaacctccatatttg 438 |||||||||||||||||| |||| |||||||||||||| |||||||||||||| |||||| Sbjct: 2548829 gataatctggtggaggatctattgagtgattttgaatatgaacttcaacctccgtatttg 2548888 Query: 439 ctgtaccggaatgctgcacaagaagtaaatggtatttggttttacaatcagcaagactgt 498 ||||||| |||||||| ||||||||||||||||| ||||| |||||||| || ||||| Sbjct: 2548889 ttgtaccgcaatgctgcccaagaagtaaatggtatctggttctacaatcaacatgactgc 2548948 Query: 499 gatgctgtagcaaatctttttggaagg 525 || ||||| |||| ||||||||||||| Sbjct: 2548949 gaagctgttgcaagtctttttggaagg 2548975 Score = 105 bits (53), Expect = 5e-19 Identities = 254/321 (79%) Strand = Plus / Plus Query: 704 gtgctgcaagcattggaggtgtatcaagtgggtcaatggttggaagagctcatccatcca 763 ||||||| |||||||| |||| |||| || |||||| |||||| || ||||||||| Sbjct: 2550423 gtgctgctagcattggcagtgtctcaaatgctccaatggctggaagggcgcatccatcct 2550482 Query: 764 ctgagagcactgcagcttcccacatgccattgattatgccatctgctgcccagtcgcacc 823 ||||||| |||| || |||| |||| ||||| || ||||||||| | | | | || | Sbjct: 2550483 ctgagagtgttgcaactccccatgtgcccttgatcattccatctgctactccgacacatc 2550542 Query: 824 aaataccccctcctttaggaggttcatcagcgccaccactccccgtgcaggacactaatg 883 |||||||||||||||||| || |||||||| || ||||| ||| | || || ||||||| Sbjct: 2550543 aaataccccctcctttagtcggctcatcagctccgccactgcccctccatgatactaatg 2550602 Query: 884 cccatgctagccattcaacaaatcttgtaacaccggcattctttgcccctccatcgtcct 943 ||| || || |||| |||||||||||||||| ||||| ||| | ||||| || |||| Sbjct: 2550603 tccacactgcccgttcagcaaatcttgtaacaccagcattttttacgcctccgtcatcct 2550662 Query: 944 cttctgcatcactagctccgccgatttcgtcaatgatgcccacagcaccacctcttcatg 1003 ||||| ||||| | | || || ||| || |||||||| ||||||||||||||||| Sbjct: 2550663 cttctacatcaatggtgcctccagcttcatccatgatgccaacagcaccacctcttcacc 2550722 Query: 1004 caacttcatcatctgctcaac 1024 ||||||| |||||||||||| Sbjct: 2550723 caacttctgcatctgctcaac 2550743 Score = 81.8 bits (41), Expect = 7e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 1040 atggcacccctctactccagccttttccaccacctgcaccgcctccatcttttgcccctg 1099 |||| ||||| |||||||| ||||||||||| || | || ||||||||| || ||||| Sbjct: 2550753 atggaacccccctactccaaccttttccaccgccaactccacctccatctcttacccctt 2550812 Query: 1100 cacacaacaatgactctcttatttcacgggataaagttaaggatgcccttctgagacttg 1159 || |||| | | || ||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 2550813 catacaatgaggggcctattatttcacgggataaagttaaggaagccctcctgagacttg 2550872 Query: 1160 ttcag 1164 ||||| Sbjct: 2550873 ttcag 2550877 Score = 81.8 bits (41), Expect = 7e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 1162 cagaatgaccaattcatcgatttaatttaccgggagttgcagaatgcacatatgtag 1218 ||||||||||| |||||||||||| | || ||||||||||||||||||||||||||| Sbjct: 2550957 cagaatgaccagttcatcgatttagtctatcgggagttgcagaatgcacatatgtag 2551013 Score = 75.8 bits (38), Expect = 4e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 580 agtgagtttgaggaattggaggctgttcctacgtctgccgctatagatggcccccttgaa 639 |||||||| ||||||||||||||||| ||||| ||||| || |||||||| ||||||||| Sbjct: 2550120 agtgagttcgaggaattggaggctgtgcctacatctgcagccatagatggtccccttgaa 2550179 Query: 640 cc 641 || Sbjct: 2550180 cc 2550181 Score = 48.1 bits (24), Expect = 0.096 Identities = 45/52 (86%) Strand = Plus / Plus Query: 328 aggaacacgcagccaaggtttcagtttatcgtcatgaacaggcggaacacgg 379 ||||| || ||||| ||||| ||||| ||||| ||||||||||| ||||||| Sbjct: 2548519 aggaatactcagccgaggttccagttcatcgttatgaacaggcgtaacacgg 2548570 Score = 48.1 bits (24), Expect = 0.096 Identities = 48/56 (85%) Strand = Plus / Plus Query: 526 atactgaatgcctatgccagagtacctccaaaagcgaaagtgccttctaccaaaag 581 |||||||| || ||||||| ||| ||||||||| | ||||||||||| || ||||| Sbjct: 2549983 atactgaacgcatatgccaaagtgcctccaaaaccaaaagtgccttccacgaaaag 2550038 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 301 gtggaggggtcgctgttcgtcgtaaagagg 330 |||||||||||||||||||| || |||||| Sbjct: 2548397 gtggaggggtcgctgttcgttgtgaagagg 2548426 Score = 42.1 bits (21), Expect = 6.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 1255 acaagagtgtttctgttctccgtgagttttgtatgct 1291 ||||||||| || |||||| |||||||||||||||| Sbjct: 2551048 acaagagtgcttgtgttctttgtgagttttgtatgct 2551084
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 214 bits (108), Expect = 7e-52 Identities = 144/156 (92%) Strand = Plus / Plus Query: 133 gggggcaagttgaccccaaacctggcgatggacgccgagggcacgcgcctgctcaacctc 192 ||||| ||| |||| || ||||||||||||||||| ||||| ||||| |||||||||||| Sbjct: 2779727 ggggggaaggtgacgccgaacctggcgatggacgcggaggggacgcggctgctcaacctc 2779786 Query: 193 accgtcctgcagcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccacgtc 252 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2779787 accgtgctgcagcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccacgtc 2779846 Query: 253 accctctatgacttcaacatcgacctcaatcagtgg 288 || ||||| |||||||||||||| ||||| |||||| Sbjct: 2779847 acgctctacgacttcaacatcgagctcaaccagtgg 2779882 Score = 170 bits (86), Expect = 1e-38 Identities = 110/118 (93%) Strand = Plus / Plus Query: 143 tgaccccaaacctggcgatggacgccgagggcacgcgcctgctcaacctcaccgtcctgc 202 |||||||||||||| |||||||||| |||||||||| ||||||||||||||||| |||| Sbjct: 1881261 tgaccccaaacctgacgatggacgctaagggcacgcggctgctcaacctcaccgtgctgc 1881320 Query: 203 agcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccacgtcaccctcta 260 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1881321 agcgcctcgactccgccgtcgaggacatcctcatcaccgccgcccagatcaccctcta 1881378 Score = 141 bits (71), Expect = 9e-30 Identities = 128/147 (87%) Strand = Plus / Plus Query: 379 gataatctggtggaggatttattaagtgattttgaatacgaacttcaacctccatatttg 438 |||||||| ||||||||| |||| ||||| ||||||| |||||||| ||||| |||||| Sbjct: 2780823 gataatctcgtggaggatctattgagtgactttgaatttgaacttcagcctccgtatttg 2780882 Query: 439 ctgtaccggaatgctgcacaagaagtaaatggtatttggttttacaatcagcaagactgt 498 | ||||| |||||||||||||||||||| |||||||||||||| || || ||||||||| Sbjct: 2780883 ttataccgaaatgctgcacaagaagtaaacggtatttggttttataaccaacaagactgt 2780942 Query: 499 gatgctgtagcaaatctttttggaagg 525 |||||||| ||| | ||||||||||| Sbjct: 2780943 gatgctgttgcaggtgtttttggaagg 2780969 Score = 91.7 bits (46), Expect = 7e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 580 agtgagtttgaggaattggaggctgttcctacgtctgccgctatagatggcccccttgaa 639 |||||||||||||||||||| ||||||||||| || || ||||||||||||||||||||| Sbjct: 2781446 agtgagtttgaggaattggaagctgttcctacatccgctgctatagatggcccccttgaa 2781505 Query: 640 cc 641 || Sbjct: 2781506 cc 2781507 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 328 aggaacacgcagccaaggtttcagtttatcgtcatgaacaggcggaacac 377 ||||||| |||||| ||||| ||||| ||||||||||||||||| ||||| Sbjct: 2780161 aggaacaagcagccgaggttccagttcatcgtcatgaacaggcgtaacac 2780210 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 890 ctagccattcaacaaatcttgtaacaccggcattctttgcccctccatcgtcctcttctg 949 ||||||| ||||||||||||||||| || || || ||||| ||||| || || ||||||| Sbjct: 2781985 ctagccactcaacaaatcttgtaactccagccttttttgcacctccctcatcgtcttctg 2782044 Query: 950 catca 954 ||||| Sbjct: 2782045 catca 2782049 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 1094 cccctgcacacaacaatgactctcttatttcacgggataaagttaaggatgcccttctga 1153 |||||| ||||||| |||| || ||||||| ||||||||||||| ||||| || |||| Sbjct: 2782189 cccctgtacacaacgatgagcctgttatttcgagggataaagttaaagatgctctcctga 2782248 Query: 1154 gacttgttcag 1164 | ||||||||| Sbjct: 2782249 ggcttgttcag 2782259 Score = 52.0 bits (26), Expect = 0.006 Identities = 36/38 (94%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 1328 ttgatgtaga-ttcttatagcaatggctggtagtattt 1364 |||||||||| || |||||||||||||||||||||||| Sbjct: 2782556 ttgatgtagagtttttatagcaatggctggtagtattt 2782593 Score = 46.1 bits (23), Expect = 0.38 Identities = 38/43 (88%) Strand = Plus / Plus Query: 288 gagccgcaaggacgtggaggggtcgctgttcgtcgtaaagagg 330 |||||| |||||||| ||||| ||||||||||| || |||||| Sbjct: 2780006 gagccggaaggacgtcgagggatcgctgttcgtggtgaagagg 2780048
>emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb0075N21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145539 Score = 214 bits (108), Expect = 7e-52 Identities = 144/156 (92%) Strand = Plus / Minus Query: 133 gggggcaagttgaccccaaacctggcgatggacgccgagggcacgcgcctgctcaacctc 192 ||||| ||| |||| || ||||||||||||||||| ||||| ||||| |||||||||||| Sbjct: 90720 ggggggaaggtgacgccgaacctggcgatggacgcggaggggacgcggctgctcaacctc 90661 Query: 193 accgtcctgcagcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccacgtc 252 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90660 accgtgctgcagcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccacgtc 90601 Query: 253 accctctatgacttcaacatcgacctcaatcagtgg 288 || ||||| |||||||||||||| ||||| |||||| Sbjct: 90600 acgctctacgacttcaacatcgagctcaaccagtgg 90565 Score = 141 bits (71), Expect = 9e-30 Identities = 128/147 (87%) Strand = Plus / Minus Query: 379 gataatctggtggaggatttattaagtgattttgaatacgaacttcaacctccatatttg 438 |||||||| ||||||||| |||| ||||| ||||||| |||||||| ||||| |||||| Sbjct: 89624 gataatctcgtggaggatctattgagtgactttgaatttgaacttcagcctccgtatttg 89565 Query: 439 ctgtaccggaatgctgcacaagaagtaaatggtatttggttttacaatcagcaagactgt 498 | ||||| |||||||||||||||||||| |||||||||||||| || || ||||||||| Sbjct: 89564 ttataccgaaatgctgcacaagaagtaaacggtatttggttttataaccaacaagactgt 89505 Query: 499 gatgctgtagcaaatctttttggaagg 525 |||||||| ||| | ||||||||||| Sbjct: 89504 gatgctgttgcaggtgtttttggaagg 89478 Score = 91.7 bits (46), Expect = 7e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 580 agtgagtttgaggaattggaggctgttcctacgtctgccgctatagatggcccccttgaa 639 |||||||||||||||||||| ||||||||||| || || ||||||||||||||||||||| Sbjct: 89001 agtgagtttgaggaattggaagctgttcctacatccgctgctatagatggcccccttgaa 88942 Query: 640 cc 641 || Sbjct: 88941 cc 88940 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 328 aggaacacgcagccaaggtttcagtttatcgtcatgaacaggcggaacac 377 ||||||| |||||| ||||| ||||| ||||||||||||||||| ||||| Sbjct: 90286 aggaacaagcagccgaggttccagttcatcgtcatgaacaggcgtaacac 90237 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Minus Query: 890 ctagccattcaacaaatcttgtaacaccggcattctttgcccctccatcgtcctcttctg 949 ||||||| ||||||||||||||||| || || || ||||| ||||| || || ||||||| Sbjct: 88462 ctagccactcaacaaatcttgtaactccagccttttttgcacctccctcatcgtcttctg 88403 Query: 950 catca 954 ||||| Sbjct: 88402 catca 88398 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Minus Query: 1094 cccctgcacacaacaatgactctcttatttcacgggataaagttaaggatgcccttctga 1153 |||||| ||||||| |||| || ||||||| ||||||||||||| ||||| || |||| Sbjct: 88258 cccctgtacacaacgatgagcctgttatttcgagggataaagttaaagatgctctcctga 88199 Query: 1154 gacttgttcag 1164 | ||||||||| Sbjct: 88198 ggcttgttcag 88188 Score = 52.0 bits (26), Expect = 0.006 Identities = 36/38 (94%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 1328 ttgatgtaga-ttcttatagcaatggctggtagtattt 1364 |||||||||| || |||||||||||||||||||||||| Sbjct: 87891 ttgatgtagagtttttatagcaatggctggtagtattt 87854 Score = 46.1 bits (23), Expect = 0.38 Identities = 38/43 (88%) Strand = Plus / Minus Query: 288 gagccgcaaggacgtggaggggtcgctgttcgtcgtaaagagg 330 |||||| |||||||| ||||| ||||||||||| || |||||| Sbjct: 90441 gagccggaaggacgtcgagggatcgctgttcgtggtgaagagg 90399
>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151878 Score = 214 bits (108), Expect = 7e-52 Identities = 144/156 (92%) Strand = Plus / Plus Query: 133 gggggcaagttgaccccaaacctggcgatggacgccgagggcacgcgcctgctcaacctc 192 ||||| ||| |||| || ||||||||||||||||| ||||| ||||| |||||||||||| Sbjct: 148653 ggggggaaggtgacgccgaacctggcgatggacgcggaggggacgcggctgctcaacctc 148712 Query: 193 accgtcctgcagcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccacgtc 252 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148713 accgtgctgcagcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccacgtc 148772 Query: 253 accctctatgacttcaacatcgacctcaatcagtgg 288 || ||||| |||||||||||||| ||||| |||||| Sbjct: 148773 acgctctacgacttcaacatcgagctcaaccagtgg 148808 Score = 141 bits (71), Expect = 9e-30 Identities = 128/147 (87%) Strand = Plus / Plus Query: 379 gataatctggtggaggatttattaagtgattttgaatacgaacttcaacctccatatttg 438 |||||||| ||||||||| |||| ||||| ||||||| |||||||| ||||| |||||| Sbjct: 149749 gataatctcgtggaggatctattgagtgactttgaatttgaacttcagcctccgtatttg 149808 Query: 439 ctgtaccggaatgctgcacaagaagtaaatggtatttggttttacaatcagcaagactgt 498 | ||||| |||||||||||||||||||| |||||||||||||| || || ||||||||| Sbjct: 149809 ttataccgaaatgctgcacaagaagtaaacggtatttggttttataaccaacaagactgt 149868 Query: 499 gatgctgtagcaaatctttttggaagg 525 |||||||| ||| | ||||||||||| Sbjct: 149869 gatgctgttgcaggtgtttttggaagg 149895 Score = 91.7 bits (46), Expect = 7e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 580 agtgagtttgaggaattggaggctgttcctacgtctgccgctatagatggcccccttgaa 639 |||||||||||||||||||| ||||||||||| || || ||||||||||||||||||||| Sbjct: 150372 agtgagtttgaggaattggaagctgttcctacatccgctgctatagatggcccccttgaa 150431 Query: 640 cc 641 || Sbjct: 150432 cc 150433 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 328 aggaacacgcagccaaggtttcagtttatcgtcatgaacaggcggaacac 377 ||||||| |||||| ||||| ||||| ||||||||||||||||| ||||| Sbjct: 149087 aggaacaagcagccgaggttccagttcatcgtcatgaacaggcgtaacac 149136 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 890 ctagccattcaacaaatcttgtaacaccggcattctttgcccctccatcgtcctcttctg 949 ||||||| ||||||||||||||||| || || || ||||| ||||| || || ||||||| Sbjct: 150911 ctagccactcaacaaatcttgtaactccagccttttttgcacctccctcatcgtcttctg 150970 Query: 950 catca 954 ||||| Sbjct: 150971 catca 150975 Score = 54.0 bits (27), Expect = 0.002 Identities = 60/71 (84%) Strand = Plus / Plus Query: 1094 cccctgcacacaacaatgactctcttatttcacgggataaagttaaggatgcccttctga 1153 |||||| ||||||| |||| || ||||||| ||||||||||||| ||||| || |||| Sbjct: 151115 cccctgtacacaacgatgagcctgttatttcgagggataaagttaaagatgctctcctga 151174 Query: 1154 gacttgttcag 1164 | ||||||||| Sbjct: 151175 ggcttgttcag 151185 Score = 52.0 bits (26), Expect = 0.006 Identities = 36/38 (94%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 1328 ttgatgtaga-ttcttatagcaatggctggtagtattt 1364 |||||||||| || |||||||||||||||||||||||| Sbjct: 151482 ttgatgtagagtttttatagcaatggctggtagtattt 151519 Score = 46.1 bits (23), Expect = 0.38 Identities = 38/43 (88%) Strand = Plus / Plus Query: 288 gagccgcaaggacgtggaggggtcgctgttcgtcgtaaagagg 330 |||||| |||||||| ||||| ||||||||||| || |||||| Sbjct: 148932 gagccggaaggacgtcgagggatcgctgttcgtggtgaagagg 148974
>ref|NM_001065827.1| Oryza sativa (japonica cultivar-group) Os07g0249600 (Os07g0249600) mRNA, complete cds Length = 1636 Score = 212 bits (107), Expect = 3e-51 Identities = 188/215 (87%) Strand = Plus / Plus Query: 151 aacctggcgatggacgccgagggcacgcgcctgctcaacctcaccgtcctgcagcgcctc 210 |||||||||||||||| ||||| ||||| |||||||| ||||||| || ||||||||| Sbjct: 258 aacctggcgatggacgaggaggggacgcgggtgctcaacatcaccgtgctccagcgcctc 317 Query: 211 gaccccgccgtcgaggacatcctcatcaccgccgcccacgtcaccctctatgacttcaac 270 |||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||| || Sbjct: 318 gaccccgccgtcgaggacatcctcatcaccgccggccacgtcacgctctacgacttcgac 377 Query: 271 atcgacctcaatcagtggagccgcaaggacgtggaggggtcgctgttcgtcgtaaagagg 330 | | ||||||| ||||||||||| ||||| |||||||||||||| ||||| || |||||| Sbjct: 378 accaacctcaaccagtggagccggaaggatgtggaggggtcgctcttcgttgtcaagagg 437 Query: 331 aacacgcagccaaggtttcagtttatcgtcatgaa 365 || ||||||| || || |||||| | |||||||| Sbjct: 438 aatgcgcagcccagattccagtttgttgtcatgaa 472 Score = 46.1 bits (23), Expect = 0.38 Identities = 32/35 (91%) Strand = Plus / Plus Query: 448 aatgctgcacaagaagtaaatggtatttggtttta 482 ||||||||||||||||| | ||| ||||||||||| Sbjct: 555 aatgctgcacaagaagttattggcatttggtttta 589
>dbj|AK104695.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-A01, full insert sequence Length = 1600 Score = 212 bits (107), Expect = 3e-51 Identities = 188/215 (87%) Strand = Plus / Plus Query: 151 aacctggcgatggacgccgagggcacgcgcctgctcaacctcaccgtcctgcagcgcctc 210 |||||||||||||||| ||||| ||||| |||||||| ||||||| || ||||||||| Sbjct: 229 aacctggcgatggacgaggaggggacgcgggtgctcaacatcaccgtgctccagcgcctc 288 Query: 211 gaccccgccgtcgaggacatcctcatcaccgccgcccacgtcaccctctatgacttcaac 270 |||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||| || Sbjct: 289 gaccccgccgtcgaggacatcctcatcaccgccggccacgtcacgctctacgacttcgac 348 Query: 271 atcgacctcaatcagtggagccgcaaggacgtggaggggtcgctgttcgtcgtaaagagg 330 | | ||||||| ||||||||||| ||||| |||||||||||||| ||||| || |||||| Sbjct: 349 accaacctcaaccagtggagccggaaggatgtggaggggtcgctcttcgttgtcaagagg 408 Query: 331 aacacgcagccaaggtttcagtttatcgtcatgaa 365 || ||||||| || || |||||| | |||||||| Sbjct: 409 aatgcgcagcccagattccagtttgttgtcatgaa 443 Score = 46.1 bits (23), Expect = 0.38 Identities = 32/35 (91%) Strand = Plus / Plus Query: 448 aatgctgcacaagaagtaaatggtatttggtttta 482 ||||||||||||||||| | ||| ||||||||||| Sbjct: 526 aatgctgcacaagaagttattggcatttggtttta 560
>dbj|AK067442.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100P19, full insert sequence Length = 1637 Score = 212 bits (107), Expect = 3e-51 Identities = 188/215 (87%) Strand = Plus / Plus Query: 151 aacctggcgatggacgccgagggcacgcgcctgctcaacctcaccgtcctgcagcgcctc 210 |||||||||||||||| ||||| ||||| |||||||| ||||||| || ||||||||| Sbjct: 259 aacctggcgatggacgaggaggggacgcgggtgctcaacatcaccgtgctccagcgcctc 318 Query: 211 gaccccgccgtcgaggacatcctcatcaccgccgcccacgtcaccctctatgacttcaac 270 |||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||| || Sbjct: 319 gaccccgccgtcgaggacatcctcatcaccgccggccacgtcacgctctacgacttcgac 378 Query: 271 atcgacctcaatcagtggagccgcaaggacgtggaggggtcgctgttcgtcgtaaagagg 330 | | ||||||| ||||||||||| ||||| |||||||||||||| ||||| || |||||| Sbjct: 379 accaacctcaaccagtggagccggaaggatgtggaggggtcgctcttcgttgtcaagagg 438 Query: 331 aacacgcagccaaggtttcagtttatcgtcatgaa 365 || ||||||| || || |||||| | |||||||| Sbjct: 439 aatgcgcagcccagattccagtttgttgtcatgaa 473 Score = 46.1 bits (23), Expect = 0.38 Identities = 32/35 (91%) Strand = Plus / Plus Query: 448 aatgctgcacaagaagtaaatggtatttggtttta 482 ||||||||||||||||| | ||| ||||||||||| Sbjct: 556 aatgctgcacaagaagttattggcatttggtttta 590
>ref|NM_001072319.1| Oryza sativa (japonica cultivar-group) Os11g0155000 (Os11g0155000) mRNA, complete cds Length = 1299 Score = 172 bits (87), Expect = 2e-39 Identities = 132/147 (89%) Strand = Plus / Plus Query: 379 gataatctggtggaggatttattaagtgattttgaatacgaacttcaacctccatatttg 438 |||||||||||||||||| |||| |||||||||||||| |||||||||||||| |||||| Sbjct: 617 gataatctggtggaggatctattgagtgattttgaatatgaacttcaacctccgtatttg 676 Query: 439 ctgtaccggaatgctgcacaagaagtaaatggtatttggttttacaatcagcaagactgt 498 ||||||| |||||||| ||||||||||||||||| ||||| |||||||| || ||||| Sbjct: 677 ttgtaccgcaatgctgcccaagaagtaaatggtatctggttctacaatcaacatgactgc 736 Query: 499 gatgctgtagcaaatctttttggaagg 525 || ||||| |||| ||||||||||||| Sbjct: 737 gaagctgttgcaagtctttttggaagg 763 Score = 109 bits (55), Expect = 3e-20 Identities = 61/63 (96%) Strand = Plus / Plus Query: 226 gacatcctcatcaccgccgcccacgtcaccctctatgacttcaacatcgacctcaatcag 285 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 1 gacatcctcatcaccgccgcccacgtcaccctctacgacttcaacatcgacctcaaccag 60 Query: 286 tgg 288 ||| Sbjct: 61 tgg 63 Score = 48.1 bits (24), Expect = 0.096 Identities = 45/52 (86%) Strand = Plus / Plus Query: 328 aggaacacgcagccaaggtttcagtttatcgtcatgaacaggcggaacacgg 379 ||||| || ||||| ||||| ||||| ||||| ||||||||||| ||||||| Sbjct: 307 aggaatactcagccgaggttccagttcatcgttatgaacaggcgtaacacgg 358 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 301 gtggaggggtcgctgttcgtcgtaaagagg 330 |||||||||||||||||||| || |||||| Sbjct: 185 gtggaggggtcgctgttcgttgtgaagagg 214
>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128619 Score = 170 bits (86), Expect = 1e-38 Identities = 110/118 (93%) Strand = Plus / Plus Query: 143 tgaccccaaacctggcgatggacgccgagggcacgcgcctgctcaacctcaccgtcctgc 202 |||||||||||||| |||||||||| |||||||||| ||||||||||||||||| |||| Sbjct: 75951 tgaccccaaacctgacgatggacgctaagggcacgcggctgctcaacctcaccgtgctgc 76010 Query: 203 agcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccacgtcaccctcta 260 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 76011 agcgcctcgactccgccgtcgaggacatcctcatcaccgccgcccagatcaccctcta 76068
>emb|AL928752.2|CNS08CBP Oryza sativa chromosome 12, . BAC OSJNBb0034E23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107247 Score = 170 bits (86), Expect = 1e-38 Identities = 110/118 (93%) Strand = Plus / Minus Query: 143 tgaccccaaacctggcgatggacgccgagggcacgcgcctgctcaacctcaccgtcctgc 202 |||||||||||||| |||||||||| |||||||||| ||||||||||||||||| |||| Sbjct: 86960 tgaccccaaacctgacgatggacgctaagggcacgcggctgctcaacctcaccgtgctgc 86901 Query: 203 agcgcctcgaccccgccgtcgaggacatcctcatcaccgccgcccacgtcaccctcta 260 ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 86900 agcgcctcgactccgccgtcgaggacatcctcatcaccgccgcccagatcaccctcta 86843
>dbj|AK064254.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-C08, full insert sequence Length = 1327 Score = 165 bits (83), Expect = 6e-37 Identities = 131/147 (89%) Strand = Plus / Plus Query: 379 gataatctggtggaggatttattaagtgattttgaatacgaacttcaacctccatatttg 438 |||||||||||||||||| |||| |||||||||||||| |||||||||||||| |||||| Sbjct: 645 gataatctggtggaggatctattgagtgattttgaatatgaacttcaacctccgtatttg 704 Query: 439 ctgtaccggaatgctgcacaagaagtaaatggtatttggttttacaatcagcaagactgt 498 ||||||| |||||||| ||||||||||||||||| ||||| |||||||| || ||||| Sbjct: 705 ttgtaccgcaatgctgcccaagaagtaaatggtatctggttctacaatcaacatgactgc 764 Query: 499 gatgctgtagcaaatctttttggaagg 525 || ||||| |||| |||||||||||| Sbjct: 765 gaagctgttgcaagactttttggaagg 791 Score = 109 bits (55), Expect = 3e-20 Identities = 61/63 (96%) Strand = Plus / Plus Query: 226 gacatcctcatcaccgccgcccacgtcaccctctatgacttcaacatcgacctcaatcag 285 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 29 gacatcctcatcaccgccgcccacgtcaccctctacgacttcaacatcgacctcaaccag 88 Query: 286 tgg 288 ||| Sbjct: 89 tgg 91 Score = 48.1 bits (24), Expect = 0.096 Identities = 45/52 (86%) Strand = Plus / Plus Query: 328 aggaacacgcagccaaggtttcagtttatcgtcatgaacaggcggaacacgg 379 ||||| || ||||| ||||| ||||| ||||| ||||||||||| ||||||| Sbjct: 335 aggaatactcagccgaggttccagttcatcgttatgaacaggcgtaacacgg 386 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 301 gtggaggggtcgctgttcgtcgtaaagagg 330 |||||||||||||||||||| || |||||| Sbjct: 213 gtggaggggtcgctgttcgttgtgaagagg 242
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 155 bits (78), Expect = 6e-34 Identities = 123/138 (89%) Strand = Plus / Plus Query: 151 aacctggcgatggacgccgagggcacgcgcctgctcaacctcaccgtcctgcagcgcctc 210 |||||||||||||||| ||||| ||||| |||||||| ||||||| || ||||||||| Sbjct: 8348745 aacctggcgatggacgaggaggggacgcgggtgctcaacatcaccgtgctccagcgcctc 8348804 Query: 211 gaccccgccgtcgaggacatcctcatcaccgccgcccacgtcaccctctatgacttcaac 270 |||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||| || Sbjct: 8348805 gaccccgccgtcgaggacatcctcatcaccgccggccacgtcacgctctacgacttcgac 8348864 Query: 271 atcgacctcaatcagtgg 288 | | ||||||| |||||| Sbjct: 8348865 accaacctcaaccagtgg 8348882 Score = 149 bits (75), Expect = 4e-32 Identities = 87/91 (95%) Strand = Plus / Minus Query: 143 tgaccccaaacctggcgatggacgccgagggcacgcgcctgctcaacctcaccgtcctgc 202 |||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 24173810 tgaccccaaacctgacgatggacgccgagggcacgcggctgctcaacctcaccgtgctgc 24173751 Query: 203 agcgcctcgaccccgccgtcgaggacatcct 233 |||||||||||||||||||| |||||||||| Sbjct: 24173750 agcgcctcgaccccgccgtcaaggacatcct 24173720 Score = 48.1 bits (24), Expect = 0.096 Identities = 39/44 (88%) Strand = Plus / Minus Query: 328 aggaacacgcagccaaggtttcagtttatcgtcatgaacaggcg 371 ||||| || ||||| ||||| ||||| ||||||||||||||||| Sbjct: 24173452 aggaatactcagccgaggttccagttcatcgtcatgaacaggcg 24173409 Score = 46.1 bits (23), Expect = 0.38 Identities = 38/43 (88%) Strand = Plus / Plus Query: 288 gagccgcaaggacgtggaggggtcgctgttcgtcgtaaagagg 330 |||||| ||||| |||||||||||||| ||||| || |||||| Sbjct: 8348987 gagccggaaggatgtggaggggtcgctcttcgttgtcaagagg 8349029 Score = 46.1 bits (23), Expect = 0.38 Identities = 32/35 (91%) Strand = Plus / Plus Query: 448 aatgctgcacaagaagtaaatggtatttggtttta 482 ||||||||||||||||| | ||| ||||||||||| Sbjct: 8350570 aatgctgcacaagaagttattggcatttggtttta 8350604
>dbj|AP005183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0021G06 Length = 137678 Score = 155 bits (78), Expect = 6e-34 Identities = 123/138 (89%) Strand = Plus / Plus Query: 151 aacctggcgatggacgccgagggcacgcgcctgctcaacctcaccgtcctgcagcgcctc 210 |||||||||||||||| ||||| ||||| |||||||| ||||||| || ||||||||| Sbjct: 53843 aacctggcgatggacgaggaggggacgcgggtgctcaacatcaccgtgctccagcgcctc 53902 Query: 211 gaccccgccgtcgaggacatcctcatcaccgccgcccacgtcaccctctatgacttcaac 270 |||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||| || Sbjct: 53903 gaccccgccgtcgaggacatcctcatcaccgccggccacgtcacgctctacgacttcgac 53962 Query: 271 atcgacctcaatcagtgg 288 | | ||||||| |||||| Sbjct: 53963 accaacctcaaccagtgg 53980 Score = 46.1 bits (23), Expect = 0.38 Identities = 38/43 (88%) Strand = Plus / Plus Query: 288 gagccgcaaggacgtggaggggtcgctgttcgtcgtaaagagg 330 |||||| ||||| |||||||||||||| ||||| || |||||| Sbjct: 54085 gagccggaaggatgtggaggggtcgctcttcgttgtcaagagg 54127 Score = 46.1 bits (23), Expect = 0.38 Identities = 32/35 (91%) Strand = Plus / Plus Query: 448 aatgctgcacaagaagtaaatggtatttggtttta 482 ||||||||||||||||| | ||| ||||||||||| Sbjct: 55668 aatgctgcacaagaagttattggcatttggtttta 55702
>dbj|AP003846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1710_H11 Length = 136107 Score = 149 bits (75), Expect = 4e-32 Identities = 87/91 (95%) Strand = Plus / Minus Query: 143 tgaccccaaacctggcgatggacgccgagggcacgcgcctgctcaacctcaccgtcctgc 202 |||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 107225 tgaccccaaacctgacgatggacgccgagggcacgcggctgctcaacctcaccgtgctgc 107166 Query: 203 agcgcctcgaccccgccgtcgaggacatcct 233 |||||||||||||||||||| |||||||||| Sbjct: 107165 agcgcctcgaccccgccgtcaaggacatcct 107135 Score = 48.1 bits (24), Expect = 0.096 Identities = 39/44 (88%) Strand = Plus / Minus Query: 328 aggaacacgcagccaaggtttcagtttatcgtcatgaacaggcg 371 ||||| || ||||| ||||| ||||| ||||||||||||||||| Sbjct: 106867 aggaatactcagccgaggttccagttcatcgtcatgaacaggcg 106824
>ref|NM_001058364.1| Oryza sativa (japonica cultivar-group) Os03g0837000 (Os03g0837000) mRNA, partial cds Length = 1871 Score = 79.8 bits (40), Expect = 3e-11 Identities = 73/84 (86%) Strand = Plus / Plus Query: 169 gagggcacgcgcctgctcaacctcaccgtcctgcagcgcctcgaccccgccgtcgaggac 228 ||||||||||| |||||||||||| || |||| ||||||||||||||||||| ||| Sbjct: 191 gagggcacgcggacgctcaacctcacggtgctgcgtcgcctcgaccccgccgtcgccgac 250 Query: 229 atcctcatcaccgccgcccacgtc 252 |||||||||| |||||| |||||| Sbjct: 251 atcctcatcatcgccgcgcacgtc 274
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 79.8 bits (40), Expect = 3e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 169 gagggcacgcgcctgctcaacctcaccgtcctgcagcgcctcgaccccgccgtcgaggac 228 ||||||||||| |||||||||||| || |||| ||||||||||||||||||| ||| Sbjct: 34960074 gagggcacgcggacgctcaacctcacggtgctgcgtcgcctcgaccccgccgtcgccgac 34960015 Query: 229 atcctcatcaccgccgcccacgtc 252 |||||||||| |||||| |||||| Sbjct: 34960014 atcctcatcatcgccgcgcacgtc 34959991 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Minus Query: 301 gtggaggggtcgctgttcgtcgtaaagagg 330 |||||||||||||| |||||||| |||||| Sbjct: 34959844 gtggaggggtcgctcttcgtcgtcaagagg 34959815
>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete sequence Length = 171376 Score = 79.8 bits (40), Expect = 3e-11 Identities = 73/84 (86%) Strand = Plus / Plus Query: 169 gagggcacgcgcctgctcaacctcaccgtcctgcagcgcctcgaccccgccgtcgaggac 228 ||||||||||| |||||||||||| || |||| ||||||||||||||||||| ||| Sbjct: 145478 gagggcacgcggacgctcaacctcacggtgctgcgtcgcctcgaccccgccgtcgccgac 145537 Query: 229 atcctcatcaccgccgcccacgtc 252 |||||||||| |||||| |||||| Sbjct: 145538 atcctcatcatcgccgcgcacgtc 145561 Score = 44.1 bits (22), Expect = 1.5 Identities = 28/30 (93%) Strand = Plus / Plus Query: 301 gtggaggggtcgctgttcgtcgtaaagagg 330 |||||||||||||| |||||||| |||||| Sbjct: 145708 gtggaggggtcgctcttcgtcgtcaagagg 145737
>dbj|AK068294.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013148J04, full insert sequence Length = 1873 Score = 79.8 bits (40), Expect = 3e-11 Identities = 73/84 (86%) Strand = Plus / Plus Query: 169 gagggcacgcgcctgctcaacctcaccgtcctgcagcgcctcgaccccgccgtcgaggac 228 ||||||||||| |||||||||||| || |||| ||||||||||||||||||| ||| Sbjct: 193 gagggcacgcggacgctcaacctcacggtgctgcgtcgcctcgaccccgccgtcgccgac 252 Query: 229 atcctcatcaccgccgcccacgtc 252 |||||||||| |||||| |||||| Sbjct: 253 atcctcatcatcgccgcgcacgtc 276
>gb|BT014373.1| Lycopersicon esculentum clone 133661F, mRNA sequence Length = 1530 Score = 69.9 bits (35), Expect = 3e-08 Identities = 119/147 (80%) Strand = Plus / Plus Query: 344 ggtttcagtttatcgtcatgaacaggcggaacacggataatctggtggaggatttattaa 403 ||||||||||||| || |||||| | || || || |||||| ||||||||||| | || Sbjct: 311 ggtttcagtttattgttatgaaccgccgaaatacagataatttggtggaggatctgttgg 370 Query: 404 gtgattttgaatacgaacttcaacctccatatttgctgtaccggaatgctgcacaagaag 463 | ||||||||||| || | || | |||||||||| |||| || |||||| | ||||||| Sbjct: 371 gagattttgaatatgagatccagcttccatatttgttgtatcgaaatgcttcccaagaag 430 Query: 464 taaatggtatttggttttacaatcagc 490 | ||||| || |||||||| ||||||| Sbjct: 431 ttaatgggatatggttttataatcagc 457
>gb|AY108396.1| Zea mays PCO071866 mRNA sequence Length = 729 Score = 69.9 bits (35), Expect = 3e-08 Identities = 86/103 (83%) Strand = Plus / Plus Query: 846 ttcatcagcgccaccactccccgtgcaggacactaatgcccatgctagccattcaacaaa 905 ||||||||| |||||| | ||| | || |||||||||||||| |||||| |||||||| Sbjct: 158 ttcatcagctccaccattgcccatccacgacactaatgcccacactagccggtcaacaaa 217 Query: 906 tcttgtaacaccggcattctttgcccctccatcgtcctcttct 948 ||||||||| || | |||||||| |||||| | ||||||||| Sbjct: 218 tcttgtaacgccagatttctttgcgcctccaccatcctcttct 260 Score = 46.1 bits (23), Expect = 0.38 Identities = 65/79 (82%) Strand = Plus / Plus Query: 1127 gggataaagttaaggatgcccttctgagacttgttcagaatgaccaattcatcgatttaa 1186 |||||| ||| |||||||| || | |||||||||||||| ||| | ||||||||||| Sbjct: 434 gggatagagtcaaggatgctctacagagacttgttcagagcgacgagttcatcgatttgg 493 Query: 1187 tttaccgggagttgcagaa 1205 | || ||||| |||||||| Sbjct: 494 tgtatcgggaattgcagaa 512
>gb|DQ222494.1| Solanum tuberosum clone 103A04 unknown mRNA Length = 1492 Score = 61.9 bits (31), Expect = 6e-06 Identities = 118/147 (80%) Strand = Plus / Plus Query: 344 ggtttcagtttatcgtcatgaacaggcggaacacggataatctggtggaggatttattaa 403 ||||||||||||| || |||||| | | || || |||||| ||||||||||| | || Sbjct: 270 ggtttcagtttattgtaatgaaccgcagaaatacagataatttggtggaggatctgttgg 329 Query: 404 gtgattttgaatacgaacttcaacctccatatttgctgtaccggaatgctgcacaagaag 463 | ||||||||||| || | || | ||||||||||||||| || |||||| | ||||||| Sbjct: 330 gagattttgaatatgagatccagcttccatatttgctgtatcgaaatgcttcccaagaag 389 Query: 464 taaatggtatttggttttacaatcagc 490 | || || || |||||||| ||||||| Sbjct: 390 ttaacgggatatggttttataatcagc 416
>ref|NM_100710.2| Arabidopsis thaliana unknown protein (AT1G08370) mRNA, complete cds Length = 1453 Score = 52.0 bits (26), Expect = 0.006 Identities = 68/82 (82%) Strand = Plus / Plus Query: 221 tcgaggacatcctcatcaccgccgcccacgtcaccctctatgacttcaacatcgacctca 280 ||||||| ||||||||||| ||||| || ||||| ||||||| |||||||| || |||| Sbjct: 254 tcgaggaaatcctcatcacagccgctcatgtcactttctatgaattcaacattgagctca 313 Query: 281 atcagtggagccgcaaggacgt 302 || ||||| || |||||||| Sbjct: 314 gccaatggagtcgtaaggacgt 335 Score = 52.0 bits (26), Expect = 0.006 Identities = 50/58 (86%) Strand = Plus / Plus Query: 429 tccatatttgctgtaccggaatgctgcacaagaagtaaatggtatttggttttacaat 486 ||||||||| || ||||| ||||| | |||||||||||||| |||||||| |||||| Sbjct: 462 tccatatttactttaccgtaatgcatctcaagaagtaaatggcatttggttctacaat 519
>gb|AC006932.8|AC006932 Genomic sequence for Arabidopsis thaliana BAC T27G7 from chromosome I, complete sequence Length = 89479 Score = 52.0 bits (26), Expect = 0.006 Identities = 50/58 (86%) Strand = Plus / Plus Query: 429 tccatatttgctgtaccggaatgctgcacaagaagtaaatggtatttggttttacaat 486 ||||||||| || ||||| ||||| | |||||||||||||| |||||||| |||||| Sbjct: 19790 tccatatttactttaccgtaatgcatctcaagaagtaaatggcatttggttctacaat 19847 Score = 48.1 bits (24), Expect = 0.096 Identities = 45/52 (86%) Strand = Plus / Plus Query: 221 tcgaggacatcctcatcaccgccgcccacgtcaccctctatgacttcaacat 272 ||||||| ||||||||||| ||||| || ||||| ||||||| |||||||| Sbjct: 19280 tcgaggaaatcctcatcacagccgctcatgtcactttctatgaattcaacat 19331
>emb|BX814295.1|CNS0ABYQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB66ZF10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1327 Score = 52.0 bits (26), Expect = 0.006 Identities = 68/82 (82%) Strand = Plus / Plus Query: 221 tcgaggacatcctcatcaccgccgcccacgtcaccctctatgacttcaacatcgacctca 280 ||||||| ||||||||||| ||||| || ||||| ||||||| |||||||| || |||| Sbjct: 172 tcgaggaaatcctcatcacagccgctcatgtcactttctatgaattcaacattgagctca 231 Query: 281 atcagtggagccgcaaggacgt 302 || ||||| || |||||||| Sbjct: 232 gccaatggagtcgtaaggacgt 253 Score = 52.0 bits (26), Expect = 0.006 Identities = 50/58 (86%) Strand = Plus / Plus Query: 429 tccatatttgctgtaccggaatgctgcacaagaagtaaatggtatttggttttacaat 486 ||||||||| || ||||| ||||| | |||||||||||||| |||||||| |||||| Sbjct: 380 tccatatttactttaccgtaatgcatctcaagaagtaaatggcatttggttctacaat 437
>emb|BX815594.1|CNS0ABE0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS75ZA01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1308 Score = 52.0 bits (26), Expect = 0.006 Identities = 68/82 (82%) Strand = Plus / Plus Query: 221 tcgaggacatcctcatcaccgccgcccacgtcaccctctatgacttcaacatcgacctca 280 ||||||| ||||||||||| ||||| || ||||| ||||||| |||||||| || |||| Sbjct: 193 tcgaggaaatcctcatcacagccgctcatgtcactttctatgaattcaacattgagctca 252 Query: 281 atcagtggagccgcaaggacgt 302 || ||||| || |||||||| Sbjct: 253 gccaatggagtcgtaaggacgt 274 Score = 52.0 bits (26), Expect = 0.006 Identities = 50/58 (86%) Strand = Plus / Plus Query: 429 tccatatttgctgtaccggaatgctgcacaagaagtaaatggtatttggttttacaat 486 ||||||||| || ||||| ||||| | |||||||||||||| |||||||| |||||| Sbjct: 401 tccatatttactttaccgtaatgcatctcaagaagtaaatggcatttggttctacaat 458
>gb|AY105973.1| Zea mays PCO078387 mRNA sequence Length = 846 Score = 52.0 bits (26), Expect = 0.006 Identities = 74/90 (82%) Strand = Plus / Plus Query: 877 actaatgcccatgctagccattcaacaaatcttgtaacaccggcattctttgcccctcca 936 ||||||||||| |||||| ||||||||||||| ||||| | |||||||| |||||| Sbjct: 196 actaatgcccacactagccggccaacaaatcttgtgacaccagatttctttgcgcctcca 255 Query: 937 tcgtcctcttctgcatcactagctccgccg 966 | |||||||| || |||| ||||||||| Sbjct: 256 ccatcctcttcagctccactggctccgccg 285
>gb|AF007109.1|AF007109 Arabidopsis thaliana mRNA, similar to yeast dcp1, complete cds Length = 1358 Score = 52.0 bits (26), Expect = 0.006 Identities = 68/82 (82%) Strand = Plus / Plus Query: 221 tcgaggacatcctcatcaccgccgcccacgtcaccctctatgacttcaacatcgacctca 280 ||||||| ||||||||||| ||||| || ||||| ||||||| |||||||| || |||| Sbjct: 142 tcgaggaaatcctcatcacagccgctcatgtcactttctatgaattcaacattgagctca 201 Query: 281 atcagtggagccgcaaggacgt 302 || ||||| || |||||||| Sbjct: 202 gccaatggagtcgtaaggacgt 223 Score = 52.0 bits (26), Expect = 0.006 Identities = 50/58 (86%) Strand = Plus / Plus Query: 429 tccatatttgctgtaccggaatgctgcacaagaagtaaatggtatttggttttacaat 486 ||||||||| || ||||| ||||| | |||||||||||||| |||||||| |||||| Sbjct: 350 tccatatttactttaccgtaatgcatctcaagaagtaaatggcatttggttctacaat 407
>gb|AC183482.3| Dasypus novemcinctus clone VMRC5-411P7, complete sequence Length = 85272 Score = 46.1 bits (23), Expect = 0.38 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 tccccttccccttcccctgcctg 25 ||||||||||||||||||||||| Sbjct: 61779 tccccttccccttcccctgcctg 61801
>gb|AC188392.3| Rhesus macaque BAC clone CH250-3H12 from chromosome unknown, complete sequence Length = 166177 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2 gtccccttccccttcccctgcc 23 |||||||||||||||||||||| Sbjct: 157207 gtccccttccccttcccctgcc 157186
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 205 cgcctcgaccccgccgtcgagg 226 |||||||||||||||||||||| Sbjct: 476210 cgcctcgaccccgccgtcgagg 476231
>gb|AC102303.10| Mus musculus chromosome 1, clone RP24-403I11, complete sequence Length = 162813 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 tccccttccccttcccctgcct 24 |||||||||||||||||||||| Sbjct: 1358 tccccttccccttcccctgcct 1337
>gb|AC110250.16| Mus musculus chromosome 1, clone RP23-260K6, complete sequence Length = 219359 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1395 caatgtcattacatttatgtaa 1416 |||||||||||||||||||||| Sbjct: 71811 caatgtcattacatttatgtaa 71832
>gb|AC139223.8| Mus musculus chromosome 8, clone RP24-322F24, complete sequence Length = 180051 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 4 ccccttccccttcccctgcctgctcc 29 ||||||||||||||||| |||||||| Sbjct: 157864 ccccttccccttccccttcctgctcc 157889
>gb|AC116995.3| Mus musculus BAC clone RP23-3C16 from 1, complete sequence Length = 173131 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1337 attcttatagcaatggctggta 1358 |||||||||||||||||||||| Sbjct: 133563 attcttatagcaatggctggta 133584
>gb|AC157786.7| Mus musculus chromosome 1, clone RP23-280O23, complete sequence Length = 205264 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3 tccccttccccttcccctgcct 24 |||||||||||||||||||||| Sbjct: 121753 tccccttccccttcccctgcct 121774
>dbj|AK043563.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830008D12 product:unclassifiable, full insert sequence Length = 2661 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 4 ccccttccccttcccctgcctgctcc 29 ||||||||||||||||| |||||||| Sbjct: 933 ccccttccccttccccttcctgctcc 958
>emb|AL670238.5| Mouse DNA sequence from clone RP23-16J5 on chromosome X, complete sequence Length = 223392 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1308 tatagatttgtattgatgtgtt 1329 |||||||||||||||||||||| Sbjct: 34810 tatagatttgtattgatgtgtt 34831
>ref|XM_001026651.1| Tetrahymena thermophila SB210 ATPase, AAA family protein (TTHERM_01128570) mRNA, complete cds Length = 1290 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1334 tagattcttatagcaatggct 1354 ||||||||||||||||||||| Sbjct: 92 tagattcttatagcaatggct 112
>gb|CP000453.1| Alkalilimnicola ehrlichei MLHE-1, complete genome Length = 3275944 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 107 cgatgtcgccaccgccgccgactaacggg 135 |||| ||||||||||||||||||| |||| Sbjct: 2575192 cgatttcgccaccgccgccgactaccggg 2575164
>emb|AM260479.1| Ralstonia eutropha H16 chromosome 1 Length = 4052032 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 171 gggcacgcgcctgctcaacctcacc 195 |||||||||||||||||||| |||| Sbjct: 3998283 gggcacgcgcctgctcaaccgcacc 3998259
>gb|AC150860.4| Bos taurus BAC CH240-424I20 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 165874 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 tccccttcccctgcctgctcc 29 ||||||||||||||||||||| Sbjct: 56159 tccccttcccctgcctgctcc 56179
>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J22, complete sequence Length = 173903 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 tccccttccccttcccctgcc 23 ||||||||||||||||||||| Sbjct: 132019 tccccttccccttcccctgcc 131999
>gb|AE006183.1| Pasteurella multocida subsp. multocida str. Pm70 section 150 of 204 of the complete genome Length = 13350 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 480 ttacaatcagcaagactgtga 500 ||||||||||||||||||||| Sbjct: 2692 ttacaatcagcaagactgtga 2712
>gb|AC145838.3| Microcebus murinus clone CH257-311F17, complete sequence Length = 204661 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 tccccttccccttcccctgcc 23 ||||||||||||||||||||| Sbjct: 124287 tccccttccccttcccctgcc 124267
>gb|AC125167.4| Mus musculus BAC clone RP24-445E10 from chromosome 1, complete sequence Length = 167342 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 tccccttccccttcccctgcc 23 ||||||||||||||||||||| Sbjct: 61022 tccccttccccttcccctgcc 61042
>gb|U14913.2|YSCH8167 Saccharomyces cerevisiae chromosome XII cosmid 8167 Length = 38870 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 465 aaatggtatttggttttacaa 485 ||||||||||||||||||||| Sbjct: 35775 aaatggtatttggttttacaa 35795
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 228 catcctcatcaccgccgccca 248 ||||||||||||||||||||| Sbjct: 1800787 catcctcatcaccgccgccca 1800807
>ref|NM_063968.3| Caenorhabditis elegans F33A8.5 (F33A8.5) mRNA, complete cds Length = 643 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 atgaacaggcggaacacggat 381 ||||||||||||||||||||| Sbjct: 493 atgaacaggcggaacacggat 473
>emb|CT009573.7| Mouse DNA sequence from clone RP23-13F19 on chromosome 17, complete sequence Length = 93756 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 tccccttccccttcccctgcc 23 ||||||||||||||||||||| Sbjct: 38091 tccccttccccttcccctgcc 38111
>emb|Z81525.1|CEF33A8 Caenorhabditis elegans Cosmid F33A8, complete sequence Length = 30782 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 atgaacaggcggaacacggat 381 ||||||||||||||||||||| Sbjct: 28157 atgaacaggcggaacacggat 28177
>gb|AC159538.20| Medicago truncatula clone mth2-48f16, complete sequence Length = 123581 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1066 ccaccacctgcaccgcctcca 1086 ||||||||||||||||||||| Sbjct: 86417 ccaccacctgcaccgcctcca 86397
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 tccccttccccttcccctgcc 23 ||||||||||||||||||||| Sbjct: 2685499 tccccttccccttcccctgcc 2685479
>emb|AL139187.19| Human DNA sequence from clone RP11-81F11 on chromosome 13 Contains a gene for a novel protein similar to RhoGAP, complete sequence Length = 166329 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 ccttccccttcccctgcctgc 26 ||||||||||||||||||||| Sbjct: 112062 ccttccccttcccctgcctgc 112042
>emb|Z84483.1|HS46H23 Human DNA sequence from clone RP1-46H23 on chromosome 13. Contains the 3' end of the KL gene for klotho, the 3' end of the gene for a novel RhoGAP domain protein, ESTs, STSs and GSSs, complete sequence Length = 129098 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 ccttccccttcccctgcctgc 26 ||||||||||||||||||||| Sbjct: 122158 ccttccccttcccctgcctgc 122178
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 210 cgaccccgccgtcgaggacatcctcatca 238 ||||| || |||||||||||||||||||| Sbjct: 193440 cgaccacgacgtcgaggacatcctcatca 193468
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 210 cgaccccgccgtcgaggacatcctcatca 238 ||||| || |||||||||||||||||||| Sbjct: 105524 cgaccacgacgtcgaggacatcctcatca 105552
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12 Length = 348934 Score = 42.1 bits (21), Expect = 6.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 210 cgaccccgccgtcgaggacatcctcatca 238 ||||| || |||||||||||||||||||| Sbjct: 26899 cgaccacgacgtcgaggacatcctcatca 26927
>emb|CR936318.6| Mouse DNA sequence from clone RP24-231J6 on chromosome X, complete sequence Length = 14940 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1471 actgagcaatcacctctgtcacctc 1495 |||||||| |||||||||||||||| Sbjct: 8178 actgagcactcacctctgtcacctc 8202
>gb|AC109617.11| Mus musculus chromosome 15, clone RP24-360D1, complete sequence Length = 189763 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 tccccttccccttcccctgcc 23 ||||||||||||||||||||| Sbjct: 84135 tccccttccccttcccctgcc 84115
>gb|AC154497.2| Mus musculus BAC clone RP24-112C15 from chromosome 17, complete sequence Length = 176161 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 tccccttccccttcccctgcc 23 ||||||||||||||||||||| Sbjct: 87243 tccccttccccttcccctgcc 87263
>dbj|AK115708.1| Ciona intestinalis cDNA, clone:cilv017l22, full insert sequence Length = 1393 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 828 accccctcctttaggaggttcatca 852 |||||||||||||||||||| |||| Sbjct: 1024 accccctcctttaggaggttgatca 1000
>dbj|AK112199.1| Ciona intestinalis cDNA, clone:cits044k03, full insert sequence Length = 1337 Score = 42.1 bits (21), Expect = 6.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 828 accccctcctttaggaggttcatca 852 |||||||||||||||||||| |||| Sbjct: 963 accccctcctttaggaggttgatca 939
>emb|AJ871581.1| Streptomyces achromogenes subsp. rubradiris complete rubradirin gene cluster, strain NRRL 3061 Length = 105657 Score = 42.1 bits (21), Expect = 6.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 205 cgcctcgaccccgccgtcgaggacatcctcatc 237 |||| |||||||||||||| |||||||| |||| Sbjct: 50267 cgccccgaccccgccgtcgcggacatccgcatc 50235
>gb|AC124592.6| Mus musculus BAC clone RP23-137M18 from 15, complete sequence Length = 204483 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 tccccttccccttcccctgcc 23 ||||||||||||||||||||| Sbjct: 13837 tccccttccccttcccctgcc 13857
>emb|AL591514.7| Mouse DNA sequence from clone RP23-266L14 on chromosome 11, complete sequence Length = 229872 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 tccccttccccttcccctgcc 23 ||||||||||||||||||||| Sbjct: 134731 tccccttccccttcccctgcc 134711
>emb|AL772408.4| Mouse DNA sequence from clone RP23-339B20 on chromosome 2, complete sequence Length = 208703 Score = 42.1 bits (21), Expect = 6.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 gtccccttccccttcccctgc 22 ||||||||||||||||||||| Sbjct: 84278 gtccccttccccttcccctgc 84258 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 276,247,803 Number of extensions: 15017212 Number of successful extensions: 331418 Number of sequences better than 10.0: 72 Number of HSP's gapped: 331412 Number of HSP's successfully gapped: 149 Length of query: 1563 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1540 Effective length of database: 18,503,978,556 Effective search space: 28496126976240 Effective search space used: 28496126976240 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
