Clone Name | FLbaf8h04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AK062807:Os04g0382900 | 30 | 1.2 | 2 | AK061001:Os04g0689900 | 30 | 1.2 | 3 | AK107884:Os02g0666000 | 28 | 2.7 | 4 | Os11g0644100:Os11g0644100 | 27 | 6.0 | 5 | Os01g0596600:Os01g0596600 | 27 | 6.0 | 6 | AK072836:Os01g0393000 | 27 | 6.0 | 7 | Os09g0410700:Os09g0410700 | 27 | 7.7 | 8 | AY256682:Os06g0493100 | 27 | 7.7 | 9 | AK063797:Os06g0493100 | 27 | 7.7 |
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>AK062807:Os04g0382900 | Length = 134 Score = 29.6 bits (65), Expect = 1.2 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 5/35 (14%) Frame = +2 Query: 176 LNPQVCPKRP----SCATPGASYTN-GPKCIYHNR 265 +NP + R SC G SYT G +CIYHNR Sbjct: 98 VNPSLVADRQRCIGSCPARGGSYTGRGNQCIYHNR 132
>AK061001:Os04g0689900 | Length = 278 Score = 29.6 bits (65), Expect = 1.2 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = +2 Query: 242 PKCIYHNREAVCXXXXXQWPWP*CNVISAYLCVCIA 349 P C YHN +C WP +VISA L +A Sbjct: 242 PVCTYHNNRLICSASTRSWP----SVISALLFTFLA 273
>AK107884:Os02g0666000 | Length = 97 Score = 28.5 bits (62), Expect = 2.7 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 10/61 (16%) Frame = +1 Query: 52 DGPSHREQVI----------HGEDEEPCCAVGGRRPPPHSCGGRRDQRFRSAKPAGVPQA 201 DGPS RE+V+ E+ E CAV G P + R +PAG P A Sbjct: 32 DGPSEREEVVLDLGPELVVPAAEEGEQGCAVVGEEPA---------MQLRRQQPAGSPPA 82 Query: 202 S 204 + Sbjct: 83 A 83
>Os11g0644100:Os11g0644100 | Length = 397 Score = 27.3 bits (59), Expect = 6.0 Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 2/20 (10%) Frame = +1 Query: 103 CCAVGGR--RPPPHSCGGRR 156 C A GGR R PP CGGRR Sbjct: 377 CPAKGGRGRRRPPSQCGGRR 396
>Os01g0596600:Os01g0596600 | Length = 783 Score = 27.3 bits (59), Expect = 6.0 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 Query: 148 GRRDQRFRSAKPAGVPQASQL 210 GRRD R R A+P PQ++QL Sbjct: 215 GRRDTRSRGARPIEDPQSTQL 235
>AK072836:Os01g0393000 | Length = 96 Score = 27.3 bits (59), Expect = 6.0 Identities = 18/56 (32%), Positives = 22/56 (39%) Frame = +1 Query: 127 PPPHSCGGRRDQRFRSAKPAGVPQASQLRYAWSELHQWP*MYIP*PRSGLLAATTP 294 PPP GG +R R P +PQ L H P ++P P AA P Sbjct: 14 PPPLPPGGAASRRHRRFLPTALPQVPPL-----PPHAAPPFFVPPPPPLRFAAPAP 64
>Os09g0410700:Os09g0410700 | Length = 363 Score = 26.9 bits (58), Expect = 7.7 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = -3 Query: 226 RSRRSAAGTLGAHLRV*RCEIVDPGVHRSCEEEDDDRQQRSMALR 92 R+RR+ TLG +R D + C++ DDD + LR Sbjct: 240 RARRAEITTLGGRVRSVLLITADEQQQQHCDDVDDDEDGHRLLLR 284
>AY256682:Os06g0493100 | Length = 82 Score = 26.9 bits (58), Expect = 7.7 Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 1/21 (4%) Frame = +2 Query: 206 SCATPGASYTN-GPKCIYHNR 265 +C TPG YTN CIY NR Sbjct: 52 ACPTPGLPYTNPRDPCIYRNR 72
>AK063797:Os06g0493100 | Length = 82 Score = 26.9 bits (58), Expect = 7.7 Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 1/21 (4%) Frame = +2 Query: 206 SCATPGASYTN-GPKCIYHNR 265 +C TPG YTN CIY NR Sbjct: 52 ACPTPGLPYTNPRDPCIYRNR 72 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 15,499,437 Number of extensions: 364914 Number of successful extensions: 1079 Number of sequences better than 10.0: 9 Number of HSP's gapped: 1077 Number of HSP's successfully gapped: 9 Length of query: 171 Length of database: 15,399,855 Length adjustment: 93 Effective length of query: 78 Effective length of database: 11,676,042 Effective search space: 910731276 Effective search space used: 910731276 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)