ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf8h04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P46531:NOTC1_HUMAN Neurogenic locus notch homolog protein 1 prec... 29 8.1

>P46531:NOTC1_HUMAN Neurogenic locus notch homolog protein 1 precursor - Homo sapiens|
           (Human)
          Length = 2556
 Score = 29.3 bits (64), Expect = 8.1
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 173 ALNPQVCPKRPSCATPGASYTNGPKCIYHNREAVC 277
           AL P +  + P C+ PG +  NG KC   N    C
Sbjct: 12  ALLPALAARGPRCSQPGETCLNGGKCEAANGTEAC 46


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 94,591,239
Number of extensions: 2167123
Number of successful extensions: 4637
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4636
Number of HSP's successfully gapped: 1
Length of query: 171
Length of database: 100,686,439
Length adjustment: 105
Effective length of query: 66
Effective length of database: 71,885,464
Effective search space: 4744440624
Effective search space used: 4744440624
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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