Clone Name	FLbaf8f05
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	Q3MHE8:SRPR_BOVIN Signal recognition particle receptor subunit a...	392	e-108
2	Q9U5L1:SRPR_DROME Signal recognition particle receptor subunit a...	367	e-100
3	Q9DBG7:SRPR_MOUSE Signal recognition particle receptor subunit a...	347	2e-94
4	P08240:SRPR_HUMAN Signal recognition particle receptor subunit a...	347	2e-94
5	P06625:SRPR_CANFA Signal recognition particle receptor subunit a...	343	2e-93
6	P32916:SRPR_YEAST Signal recognition particle receptor subunit a...	229	3e-59
7	Q57739:Y291_METJA Probable signal recognition particle protein M...	189	4e-47
8	P27414:DOCK_SULAC Probable signal recognition particle protein -...	166	5e-40
9	Q54431:SRP54_STRMU Signal recognition particle protein - Strepto...	126	4e-28
10	P56005:SRP54_HELPY Signal recognition particle protein - Helicob...	124	1e-27
11	Q9ZK62:SRP54_HELPJ Signal recognition particle protein - Helicob...	123	3e-27
12	P74214:SRP54_SYNY3 Signal recognition particle protein - Synecho...	120	2e-26
13	P49970:SR543_HORVU Signal recognition particle 54 kDa protein 3 ...	120	2e-26
14	P49969:SR542_HORVU Signal recognition particle 54 kDa protein 2 ...	119	4e-26
15	P49971:SR541_SOLLC Signal recognition particle 54 kDa protein 1 ...	119	4e-26
16	P49968:SR541_HORVU Signal recognition particle 54 kDa protein 1 ...	119	4e-26
17	P49972:SR542_SOLLC Signal recognition particle 54 kDa protein 2 ...	119	7e-26
18	Q55311:SRP54_SYNP7 Signal sequence-binding protein - Synechococc...	118	1e-25
19	Q01442:SRP54_MYCMY Signal recognition particle protein - Mycopla...	118	1e-25
20	Q5R4R6:SRP54_PONPY Signal recognition particle 54 kDa protein - ...	116	3e-25
21	Q4R965:SRP54_MACFA Signal recognition particle 54 kDa protein - ...	116	3e-25
22	P61011:SRP54_HUMAN Signal recognition particle 54 kDa protein - ...	116	3e-25
23	P61010:SRP54_CANFA Signal recognition particle 54 kDa protein - ...	116	3e-25
24	P57473:SRP54_BUCAI Signal recognition particle protein - Buchner...	116	3e-25
25	Q2T9U1:SRP54_BOVIN Signal recognition particle 54 kDa protein - ...	116	3e-25
26	P14576:SRP54_MOUSE Signal recognition particle 54 kDa protein - ...	116	5e-25
27	Q6AYB5:SRP54_RAT Signal recognition particle 54 kDa protein - Ra...	115	6e-25
28	O15821:SRP54_ENTHI Signal recognition particle 54 kDa protein - ...	115	6e-25
29	P37107:SR54C_ARATH Signal recognition particle 54 kDa protein, c...	115	6e-25
30	P37106:SR541_ARATH Signal recognition particle 54 kDa protein 1 ...	114	1e-24
31	P49967:SR543_ARATH Signal recognition particle 54 kDa protein 3 ...	114	2e-24
32	Q8MZJ6:SRP54_GEOCY Signal recognition particle 54 kDa protein - ...	114	2e-24
33	P21565:SRP54_SCHPO Signal recognition particle 54 kDa protein ho...	112	5e-24
34	P37105:SRP54_BACSU Signal recognition particle protein - Bacillu...	111	1e-23
35	P49966:SR542_ARATH Signal recognition particle 54 kDa protein 2 ...	111	1e-23
36	P20424:SRP54_YEAST Signal recognition particle subunit SRP54 - S...	110	2e-23
37	O07347:SRP54_THEAQ Signal recognition particle protein - Thermus...	109	4e-23
38	Q8K9F7:SRP54_BUCAP Signal recognition particle protein - Buchner...	109	6e-23
39	Q92J55:SRP54_RICCN Signal recognition particle protein - Rickett...	108	9e-23
40	Q4UKH4:SRP54_RICFE Signal recognition particle protein - Rickett...	107	3e-22
41	P10121:FTSY_ECOLI Cell division protein ftsY - Escherichia coli	106	5e-22
42	Q99150:SRP54_YARLI Signal recognition particle 54 kDa protein ho...	105	6e-22
43	Q1RHD6:SRP54_RICBR Signal recognition particle protein - Rickett...	105	6e-22
44	P44518:SRP54_HAEIN Signal recognition particle protein - Haemoph...	105	1e-21
45	Q89AE4:SRP54_BUCBP Signal recognition particle protein - Buchner...	103	2e-21
46	P44870:FTSY_HAEIN Cell division protein ftsY homolog - Haemophil...	103	3e-21
47	Q68XJ4:SRP54_RICTY Signal recognition particle protein - Rickett...	103	4e-21
48	Q9ZDZ0:SRP54_RICPR Signal recognition particle protein - Rickett...	103	4e-21
49	Q8ZT95:SRP54_PYRAE Signal recognition 54 kDa protein - Pyrobacul...	102	9e-21
50	Q8U070:SRP54_PYRFU Signal recognition 54 kDa protein - Pyrococcu...	101	1e-20
51	Q5JJC8:SRP54_PYRKO Signal recognition 54 kDa protein - Pyrococcu...	100	2e-20
52	Q00179:SRP54_ASPNG Signal recognition particle 54 kDa protein ho...	100	2e-20
53	P57137:FTSY_BUCAI Cell division protein ftsY homolog - Buchnera ...	100	3e-20
54	Q9V1E8:SRP54_PYRAB Signal recognition 54 kDa protein - Pyrococcu...	100	3e-20
55	Q8TUY9:SRP54_METKA Signal recognition 54 kDa protein - Methanopy...	100	3e-20
56	P0AGD7:SRP54_ECOLI Signal recognition particle protein - Escheri...	100	3e-20
57	P0AGD8:SRP54_ECOL6 Signal recognition particle protein - Escheri...	100	3e-20
58	P0AGD9:SRP54_ECO57 Signal recognition particle protein - Escheri...	100	3e-20
59	Q1RKK5:FTSY_RICBR Cell division protein ftsY homolog - Rickettsi...	100	3e-20
60	P70722:SRP54_ACIAM Signal recognition 54 kDa protein - Acidianus...	100	4e-20
61	O67066:FTSY_AQUAE Cell division protein ftsY homolog - Aquifex a...	100	4e-20
62	P75054:SRP54_MYCPN Signal recognition particle protein - Mycopla...	99	6e-20
63	P75362:FTSY_MYCPN Cell division protein ftsY homolog - Mycoplasm...	99	6e-20
64	O59307:SRP54_PYRHO Signal recognition 54 kDa protein - Pyrococcu...	99	1e-19
65	O67615:SRP54_AQUAE Signal recognition particle protein - Aquifex...	99	1e-19
66	Q4UK46:FTSY_RICFE Cell division protein ftsY homolog - Rickettsi...	98	1e-19
67	Q8KA77:FTSY_BUCAP Cell division protein ftsY homolog - Buchnera ...	98	2e-19
68	P51835:FTSY_BACSU Cell division protein ftsY homolog - Bacillus ...	98	2e-19
69	Q57565:SRP54_METJA Signal recognition 54 kDa protein - Methanoco...	97	3e-19
70	P66844:SRP54_MYCTU Signal recognition particle protein - Mycobac...	97	4e-19
71	P66845:SRP54_MYCBO Signal recognition particle protein - Mycobac...	97	4e-19
72	Q97ZE7:SRP54_SULSO Signal recognition 54 kDa protein - Sulfolobu...	96	5e-19
73	Q92GB8:FTSY_RICCN Cell division protein ftsY homolog - Rickettsi...	96	5e-19
74	P83749:FTSY_THEAQ Cell division protein ftsY - Thermus aquaticus	96	6e-19
75	Q68VX4:FTSY_RICTY Cell division protein ftsY homolog - Rickettsi...	96	6e-19
76	O05948:FTSY_RICPR Cell division protein ftsY homolog - Rickettsi...	96	8e-19
77	Q977V2:SRP54_HALVO Signal recognition 54 kDa protein - Halobacte...	95	1e-18
78	O29633:SRP54_ARCFU Signal recognition 54 kDa protein - Archaeogl...	94	2e-18
79	P57011:FTSY_NEIMB Cell division protein ftsY homolog - Neisseria...	94	2e-18
80	P57010:FTSY_NEIMA Cell division protein ftsY homolog - Neisseria...	94	2e-18
81	O30391:FTSY_NEIMC Cell division protein ftsY homolog - Neisseria...	93	4e-18
82	O33013:SRP54_MYCLE Signal recognition particle protein - Mycobac...	93	5e-18
83	Q9HMN5:SRP54_HALSA Signal recognition 54 kDa protein - Halobacte...	93	5e-18
84	P73930:FTSY_SYNY3 Cell division protein ftsY homolog - Synechocy...	93	5e-18
85	O42816:SRP54_CANAL Signal recognition particle 54 kDa protein ho...	92	7e-18
86	P47294:SRP54_MYCGE Signal recognition particle protein - Mycopla...	92	1e-17
87	O27376:SRP54_METTH Signal recognition 54 kDa protein - Methanoba...	92	1e-17
88	O33010:FTSY_MYCLE Cell division protein ftsY homolog - Mycobacte...	92	1e-17
89	Q9ZL80:FTSY_HELPJ Cell division protein ftsY homolog - Helicobac...	91	2e-17
90	Q971S9:SRP54_SULTO Signal recognition 54 kDa protein - Sulfolobu...	90	5e-17
91	O32861:FTSY_MYCHO Cell division protein ftsY homolog - Mycoplasm...	90	5e-17
92	Q8THD0:SRP54_METAC Signal recognition 54 kDa protein - Methanosa...	89	6e-17
93	P66842:FTSY_MYCTU Cell division protein ftsY homolog - Mycobacte...	89	6e-17
94	P66843:FTSY_MYCBO Cell division protein ftsY homolog - Mycobacte...	89	6e-17
95	O25458:FTSY_HELPY Cell division protein ftsY homolog - Helicobac...	89	6e-17
96	P14929:FTSY_NEIGO Cell division protein ftsY homolog - Neisseria...	89	8e-17
97	P47539:FTSY_MYCGE Cell division protein ftsY homolog - Mycoplasm...	87	2e-16
98	O07853:SRP54_SULAC Signal recognition 54 kDa protein - Sulfolobu...	87	3e-16
99	Q8PXF3:SRP54_METMA Signal recognition 54 kDa protein - Methanosa...	86	9e-16
100	Q979Y8:SRP54_THEVO Signal recognition 54 kDa protein - Thermopla...	81	2e-14
101	Q89B28:FTSY_BUCBP Cell division protein ftsY homolog - Buchnera ...	79	6e-14
102	Q9YB62:SRP54_AERPE Signal recognition 54 kDa protein - Aeropyrum...	77	3e-13
103	Q9HKT0:SRP54_THEAC Signal recognition 54 kDa protein - Thermopla...	76	5e-13
104	O52908:FLHF_CAMJE Flagellar biosynthesis protein flhF - Campylob...	65	1e-09
105	O67266:FLHF_AQUAE Flagellar biosynthesis protein flhF - Aquifex ...	63	6e-09
106	Q01960:FLHF_BACSU Flagellar biosynthesis protein flhF - Bacillus...	50	5e-05
107	O52256:FLHF_PSEPU Flagellar biosynthesis protein flhF - Pseudomo...	46	6e-04
108	Q9I3P8:FLHF_PSEAE Flagellar biosynthesis protein flhF - Pseudomo...	43	0.005
109	Q44758:FLHF_BORBU Flagellar biosynthesis protein flhF - Borrelia...	37	0.35
110	Q03391:NMDE4_MOUSE Glutamate [NMDA] receptor subunit epsilon-4 p...	33	3.9
111	Q8FXX5:SYFA_BRUSU Phenylalanyl-tRNA synthetase alpha chain - Bru...	32	8.6
112	Q8YE73:SYFA_BRUME Phenylalanyl-tRNA synthetase alpha chain - Bru...	32	8.6
113	Q57AE0:SYFA_BRUAB Phenylalanyl-tRNA synthetase alpha chain - Bru...	32	8.6
114	Q2YQV5:SYFA_BRUA2 Phenylalanyl-tRNA synthetase alpha chain - Bru...	32	8.6
115	O05412:MURI2_BACSU Glutamate racemase 2 - Bacillus subtilis	32	8.6

---

>Q3MHE8:SRPR_BOVIN Signal recognition particle receptor subunit alpha - Bos taurus|
            (Bovine)
          Length = 639
 Score =  392 bits (1006), Expect = e-108
 Identities = 255/656 (38%), Positives = 338/656 (51%), Gaps = 24/656 (3%)
 Frame = +2

Query: 89   MLEELLIFTRGGLILWSSCRALGGAALLKGSPIDALIRSCLLEERSGDAGFTQDAYALKW 268
            ML+   IF++GGL+LW       G +     P++ALIRS LL+ER G+  FT +A  LK+
Sbjct: 1    MLDFFTIFSKGGLVLW----CFQGVSDSCTGPVNALIRSVLLQERGGNNSFTHEALTLKY 56

Query: 269  TFNNDLGLVFVAVYQRMLHLLYVDDLLAAVRRDFSQIYNPNRISYDHLF----TDKFRQL 436
              +N   LVFV  +Q++L L YVD L+  V R F   Y         L     T  F+  
Sbjct: 57   KLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQND 116

Query: 437  HLEAEARAEAMKKTRQQPTXXXXXXXXXXXXXXXXXXXXNARXXXXXXXXXXXXXXXXXX 616
             L     AE   K R   T                                         
Sbjct: 117  FLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPKEKAKNNK-------- 168

Query: 617  XXEHNGYTANGADG--AHENGSHARAAALVVNNAGKENGDPNDGAFDVNTLRXXXXXXXX 790
              ++ G    G+DG  A    + A  + L V   G ENG+       +   R        
Sbjct: 169  --KNKGAKKEGSDGPLATSKAAPAEKSGLPV---GPENGEELSKEEQIRRKREEFIQKHG 223

Query: 791  XXXXXXIDVKKVAKTEPKKAVKQMRVWDDKPPKN-EKLDFTDPADERGDEVIE----KVL 955
                      K +    +K  K  RVW      N E LD++ P      E        ++
Sbjct: 224  RGMEKSSKSSK-SDAPKEKGKKAPRVWALGGSANKEVLDYSTPTTNGAPEAAPPEDINLI 282

Query: 956  TNQGXXXXXXXXXXXXXXXXXXXXXXXNAEAGQKKKGWFSSMFKSIAGNNVLEKSDLQPA 1135
               G                          A +   G    M K + G+  L + D++  
Sbjct: 283  RGTGPGRQLQDLDCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSLTREDMESV 342

Query: 1136 LKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQTAMEEALLRILTPRR 1315
            L  ++D L+ KNVA +IA +LCESVA  LEGK +G+F+ ++STV+ A++E+L++IL P+R
Sbjct: 343  LDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQR 402

Query: 1316 SIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGA 1495
             +D+LRD+  A+   +PY           KSTNLAK+++WLL++  SV++AACDTFR+GA
Sbjct: 403  RVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGA 462

Query: 1496 VEQLRTHARRLQ-------------IPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDT 1636
            VEQLRTH RRL              + +FEKGY KD A +A EAI  A     DVVLVDT
Sbjct: 463  VEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDT 522

Query: 1637 AGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARL 1816
            AGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD S   T RL
Sbjct: 523  AGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRL 582

Query: 1817 IDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLLK 1984
            IDGI+LTKFDTIDDKVGAA+SM YI+  P++FVG GQ+Y DL+ LN K++V  L+K
Sbjct: 583  IDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMK 638

---

>Q9U5L1:SRPR_DROME Signal recognition particle receptor subunit alpha homolog -|
            Drosophila melanogaster (Fruit fly)
          Length = 614

 Score =  367 bits (942), Expect = e-100
 Identities = 204/406 (50%), Positives = 267/406 (65%), Gaps = 22/406 (5%)
 Frame = +2

Query: 833  TEPKKAVKQMRVWDDKPPKNEKLDFTDPADERGDEV------IEKVLTNQGXXXXXXXXX 994
            ++P+KA K+ RVWD     ++     D + +  D+V       E V T QG         
Sbjct: 210  SKPEKAGKKPRVWD-LGGNSKDAALLDRSRDSPDDVQYQNINSELVGTMQGVIRDLDVES 268

Query: 995  XXXXXXXXXXXXXXNAEAGQKKKG---WFSSMFKSIAGNNVLEKSDLQPALKALKDRLMT 1165
                            E  Q KKG      S FK I G   +  +DLQPAL+ ++D L++
Sbjct: 269  EDEADNEDASSEGEAEEQVQSKKGKRGGLLSYFKGIVGAKTMSLADLQPALEKMRDHLIS 328

Query: 1166 KNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQA 1345
            KNVA EIA KLC+SVAASL+GK++G+F  I+S V+ A+ E+L+RIL+P+R IDI+RD   
Sbjct: 329  KNVASEIAAKLCDSVAASLDGKQMGTFDSIASQVKEALTESLVRILSPKRRIDIIRDALE 388

Query: 1346 AKERGKPYXXXXXXXXXXXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARR 1525
            +K  G+PY           KSTNLAK+ +WL++++ +V++AACDTFR+GAVEQLRTH R 
Sbjct: 389  SKRNGRPYTIIFCGVNGVGKSTNLAKICFWLIENDFNVLIAACDTFRAGAVEQLRTHTRH 448

Query: 1526 LQ-------------IPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGRMQDNEPL 1666
            L              + ++EKGY KD A +A EAI+ A   + DVVLVDTAGRMQDNEPL
Sbjct: 449  LNALHPAAKHDGRNMVQLYEKGYGKDAAGIAMEAIKFAHDTRVDVVLVDTAGRMQDNEPL 508

Query: 1667 MRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFD 1846
            MR+LSKLI +N PDLVLFVGEALVGN+AVDQL KFNQ LAD S+     +IDGI+LTKFD
Sbjct: 509  MRSLSKLIKVNNPDLVLFVGEALVGNEAVDQLVKFNQSLADYSSNENPHIIDGIVLTKFD 568

Query: 1847 TIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLLK 1984
            TIDDKVGAA+SM YI+G P++FVG GQ+Y DLK +NV ++V +L+K
Sbjct: 569  TIDDKVGAAISMTYITGQPIVFVGTGQTYADLKAINVNAVVNSLMK 614



 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 46/130 (35%), Positives = 82/130 (63%), Gaps = 2/130 (1%)
 Frame = +2

Query: 89  MLEELLIFTRGGLILWSSCRALGGAALLKGSPIDALIRSCLLEERSGDAGF-TQDAYALK 265
           ML+ ++IFT+GG++LW S  A G +     S I++LIR  +LEER+ +A +  +D  A++
Sbjct: 1   MLDFVVIFTKGGVVLWHS-NASGNSF---ASCINSLIRGVILEERNTEAKYYEEDHLAVQ 56

Query: 266 WTFNNDLGLVFVAVYQRMLHLLYVDDLLAAVRRDFSQIYNPNRISYDHLFTDKFRQ-LHL 442
           +  +N+L LV+ A++Q+++ L Y+D  LA ++  F + Y   R+  D+ F  ++R+ L  
Sbjct: 57  FKLDNELDLVYAAIFQKVIKLNYLDGFLADMQAAFKEKYGDIRLGDDYDFDREYRRVLSA 116

Query: 443 EAEARAEAMK 472
             EA A+ +K
Sbjct: 117 AEEASAKQVK 126

---

>Q9DBG7:SRPR_MOUSE Signal recognition particle receptor subunit alpha - Mus musculus|
            (Mouse)
          Length = 636

 Score =  347 bits (889), Expect = 2e-94
 Identities = 178/320 (55%), Positives = 230/320 (71%), Gaps = 13/320 (4%)
 Frame = +2

Query: 1064 GWFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGS 1243
            G    M K + G+  L + D++  L  ++D L+ KNVA +IA +LCESVA  LEGK +G+
Sbjct: 316  GGMFGMLKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGT 375

Query: 1244 FTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAK 1423
            F+ ++STV+ A++E+L++IL P+R +D+LRD+  A+ R +PY           KSTNLAK
Sbjct: 376  FSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAK 435

Query: 1424 VAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRL-------------QIPIFEKGYEKD 1564
            +++WLL++  SV++AACDTFR+GAVEQLRTH RRL              + +FEKGY KD
Sbjct: 436  ISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLTALHPPEKHGGRTMVQLFEKGYGKD 495

Query: 1565 PAVVAKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGN 1744
             A +A EAI  A     DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN
Sbjct: 496  AAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGN 555

Query: 1745 DAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCG 1924
            +AVDQL KFN+ LAD S   T RLIDGI+LTKFDTIDDKVGAA+SM YI+  P++FVG G
Sbjct: 556  EAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTG 615

Query: 1925 QSYTDLKKLNVKSIVKTLLK 1984
            Q+Y DL+ LN K++V  L+K
Sbjct: 616  QTYCDLRSLNAKAVVAALMK 635



 Score = 75.1 bits (183), Expect = 1e-12
 Identities = 42/98 (42%), Positives = 58/98 (59%)
 Frame = +2

Query: 89  MLEELLIFTRGGLILWSSCRALGGAALLKGSPIDALIRSCLLEERSGDAGFTQDAYALKW 268
           ML+   IF++GGL+LW       G +     P++ALIRS LL+ER G+  FT +A  LK+
Sbjct: 1   MLDFFTIFSKGGLVLW----CFQGVSDSCTGPVNALIRSVLLQERGGNNSFTHEALTLKY 56

Query: 269 TFNNDLGLVFVAVYQRMLHLLYVDDLLAAVRRDFSQIY 382
             +N   LVFV  +Q++L L YVD L+  V R F   Y
Sbjct: 57  KLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94

---

>P08240:SRPR_HUMAN Signal recognition particle receptor subunit alpha - Homo sapiens|
            (Human)
          Length = 638

 Score =  347 bits (889), Expect = 2e-94
 Identities = 178/320 (55%), Positives = 230/320 (71%), Gaps = 13/320 (4%)
 Frame = +2

Query: 1064 GWFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGS 1243
            G    M K + G+  L + D++  L  ++D L+ KNVA +IA +LCESVA  LEGK +G+
Sbjct: 318  GGMFGMLKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGT 377

Query: 1244 FTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAK 1423
            F+ ++STV+ A++E+L++IL P+R +D+LRD+  A+ R +PY           KSTNLAK
Sbjct: 378  FSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAK 437

Query: 1424 VAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQ-------------IPIFEKGYEKD 1564
            +++WLL++  SV++AACDTFR+GAVEQLRTH RRL              + +FEKGY KD
Sbjct: 438  ISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKD 497

Query: 1565 PAVVAKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGN 1744
             A +A EAI  A     DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN
Sbjct: 498  AAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGN 557

Query: 1745 DAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCG 1924
            +AVDQL KFN+ LAD S   T RLIDGI+LTKFDTIDDKVGAA+SM YI+  P++FVG G
Sbjct: 558  EAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTG 617

Query: 1925 QSYTDLKKLNVKSIVKTLLK 1984
            Q+Y DL+ LN K++V  L+K
Sbjct: 618  QTYCDLRSLNAKAVVAALMK 637



 Score = 75.1 bits (183), Expect = 1e-12
 Identities = 42/98 (42%), Positives = 58/98 (59%)
 Frame = +2

Query: 89  MLEELLIFTRGGLILWSSCRALGGAALLKGSPIDALIRSCLLEERSGDAGFTQDAYALKW 268
           ML+   IF++GGL+LW       G +     P++ALIRS LL+ER G+  FT +A  LK+
Sbjct: 1   MLDFFTIFSKGGLVLW----CFQGVSDSCTGPVNALIRSVLLQERGGNNSFTHEALTLKY 56

Query: 269 TFNNDLGLVFVAVYQRMLHLLYVDDLLAAVRRDFSQIY 382
             +N   LVFV  +Q++L L YVD L+  V R F   Y
Sbjct: 57  KLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94

---

>P06625:SRPR_CANFA Signal recognition particle receptor subunit alpha - Canis familiaris|
            (Dog)
          Length = 638

 Score =  343 bits (880), Expect = 2e-93
 Identities = 179/332 (53%), Positives = 232/332 (69%), Gaps = 16/332 (4%)
 Frame = +2

Query: 1037 NAEAGQKKKGWFSSMF---KSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCES 1207
            NA      KG    MF   K + G+  L + D++  L  ++D L+ KNVA +IA +LCES
Sbjct: 306  NASKPSATKGTLGGMFGMLKGLVGSKSLSREDMESVLDKMRDHLIAKNVAADIAVQLCES 365

Query: 1208 VAASLEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXX 1387
            VA  LEGK +G+F+ ++STV+ A++E+L++IL P+R +D+LRD+  A+   +PY      
Sbjct: 366  VANKLEGKVMGTFSTVTSTVKQALQESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCG 425

Query: 1388 XXXXXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQ------------ 1531
                 KSTNLAK+++WLL++  SV++AACDTFR+GAVE +RTH RRL             
Sbjct: 426  VNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEHVRTHTRRLSALHPPEKHAGPT 485

Query: 1532 -IPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPD 1708
             + +FEKGY KD A +A EAI  A     DVVLVDTAGRMQDN PLM AL+KLI +N PD
Sbjct: 486  MVQLFEKGYGKDAAGIAMEAIAFARNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPD 545

Query: 1709 LVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVY 1888
            LVLFVGEALVGN+AVDQL KFN+ LAD S   T RLIDGI+LTKFDTIDDKVGAA+SM Y
Sbjct: 546  LVLFVGEALVGNEAVDQLVKFNRALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTY 605

Query: 1889 ISGSPVMFVGCGQSYTDLKKLNVKSIVKTLLK 1984
            I+  P++FVG GQ+Y DL+ LN K++V  L+K
Sbjct: 606  ITSKPIVFVGTGQTYCDLRSLNAKAVVAALMK 637



 Score = 75.1 bits (183), Expect = 1e-12
 Identities = 42/98 (42%), Positives = 58/98 (59%)
 Frame = +2

Query: 89  MLEELLIFTRGGLILWSSCRALGGAALLKGSPIDALIRSCLLEERSGDAGFTQDAYALKW 268
           ML+   IF++GGL+LW       G +     P++ALIRS LL+ER G+  FT +A  LK+
Sbjct: 1   MLDFFTIFSKGGLVLW----CFQGVSDSCTGPVNALIRSVLLQERGGNNSFTHEALTLKY 56

Query: 269 TFNNDLGLVFVAVYQRMLHLLYVDDLLAAVRRDFSQIY 382
             +N   LVFV  +Q++L L YVD L+  V R F   Y
Sbjct: 57  KLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKY 94

---

>P32916:SRPR_YEAST Signal recognition particle receptor subunit alpha homolog -|
            Saccharomyces cerevisiae (Baker's yeast)
          Length = 621

 Score =  229 bits (585), Expect = 3e-59
 Identities = 133/343 (38%), Positives = 196/343 (57%), Gaps = 34/343 (9%)
 Frame = +2

Query: 1055 KKKGWFSSMF----KSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASL 1222
            K  G+ S+ F    K + GN  + +SDL+  L+ L  +L+TKNVA E A+ L + V+  L
Sbjct: 284  KNSGYVSTAFGFLQKHVLGNKTINESDLKSVLEKLTQQLITKNVAPEAADYLTQQVSHDL 343

Query: 1223 EGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAK----ERGK--PYXXXXX 1384
             G K  ++T + +T + ++ +AL +ILTP  S+D+LR++Q+ +    E GK  PY     
Sbjct: 344  VGSKTANWTSVENTARESLTKALTQILTPGVSVDLLREIQSKRSKKDEEGKCDPYVFSIV 403

Query: 1385 XXXXXXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRL------------ 1528
                  KSTNL+K+A+WLLQ+N  V++ ACDTFRSGAVEQLR H   L            
Sbjct: 404  GVNGVGKSTNLSKLAFWLLQNNFKVLIVACDTFRSGAVEQLRVHVENLAQLMDDSHVRGS 463

Query: 1529 ----------QIPIFEKGYEKDPAV--VAKEAIQEATRNKSDVVLVDTAGRMQDNEPLMR 1672
                       + +FE GY     V  +AK+AI+ +     D+VL+DTAGR  ++  LM 
Sbjct: 464  KNKRGKTGNDYVELFEAGYGGSDLVTKIAKQAIKYSRDQNFDIVLMDTAGRRHNDPTLMS 523

Query: 1673 ALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTI 1852
             L    +  KPD ++ VGEALVG D+V Q   FN            R +D  +++K DT+
Sbjct: 524  PLKSFADQAKPDKIIMVGEALVGTDSVQQAKNFNDAFG------KGRNLDFFIISKCDTV 577

Query: 1853 DDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 1981
             + +G  ++MVY +G P++FVG GQ+YTDL+ L+VK  V TL+
Sbjct: 578  GEMLGTMVNMVYATGIPILFVGVGQTYTDLRTLSVKWAVNTLM 620

---

>Q57739:Y291_METJA Probable signal recognition particle protein MJ0291 - Methanococcus|
            jannaschii
          Length = 409

 Score =  189 bits (480), Expect = 4e-47
 Identities = 121/318 (38%), Positives = 175/318 (55%), Gaps = 6/318 (1%)
 Frame = +2

Query: 1043 EAGQKKKGWFSSMFKSIAGNNVLEKS------DLQPALKALKDRLMTKNVAEEIAEKLCE 1204
            E  +KK  +F     + A   VL+K       D++  L+ L+  L+  +VA E+ EKL E
Sbjct: 90   EKEEKKITFFDRFGLTRAIKKVLKKEVVILEEDIEDVLEELEIALLEADVALEVVEKLIE 149

Query: 1205 SVAASLEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXX 1384
            ++   L G+K+     +      A++ A+  IL+  + IDI   ++  K  GKP      
Sbjct: 150  NIKNELVGRKISPDDNVEEITINAVKNAIKNILSQEK-IDIEEIIKKNKAEGKPTVIVFV 208

Query: 1385 XXXXXXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKD 1564
                  K+T +AK+AY L Q   SV++AA DTFR+GA+EQL  HA+ + + + +     D
Sbjct: 209  GINGTGKTTTIAKLAYKLKQKGYSVVLAAGDTFRAGAIEQLEQHAKNVGVKVIKHKPGAD 268

Query: 1565 PAVVAKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGN 1744
             A V  +AIQ A     DVVL DTAGR   N  LM  + K++ + KPDLV+FVG+AL GN
Sbjct: 269  SAAVIYDAIQHAKARGIDVVLADTAGRQATNVNLMEEIKKVVRVTKPDLVIFVGDALTGN 328

Query: 1745 DAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCG 1924
            DAV Q  +FN+          A  IDGI+LTK D  D K GAALS+ Y  G P++++G G
Sbjct: 329  DAVYQAEEFNR----------AVNIDGIILTKVDA-DAKGGAALSIGYAIGKPILYLGVG 377

Query: 1925 QSYTDLKKLNVKSIVKTL 1978
            Q Y DL + +   +V+ L
Sbjct: 378  QRYQDLIEFDADWMVRKL 395

---

>P27414:DOCK_SULAC Probable signal recognition particle protein - Sulfolobus|
            acidocaldarius
          Length = 369

 Score =  166 bits (419), Expect = 5e-40
 Identities = 96/302 (31%), Positives = 163/302 (53%)
 Frame = +2

Query: 1037 NAEAGQKKKGWFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAA 1216
            + + GQ+ K      F        +++ DL   ++ L+ +L+  +V+ E+ EK+ E +  
Sbjct: 66   SVQTGQENKQENKRSFFDFLKYKTIKEDDLNDVIEELRFQLLDSDVSYEVTEKILEDLKN 125

Query: 1217 SLEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXX 1396
            +L GKK+     +   V   +++++  ILT  +  D++  ++++ +  KP+         
Sbjct: 126  NLIGKKVSRREEVEEIVINTLKKSITEILTKNQKTDLIEKIRSSGK--KPFVIIFFGVNG 183

Query: 1397 XXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVV 1576
              K+T +AKV   L ++NLS ++AA DTFR+ A EQL  HA +L++ +    Y  DPA V
Sbjct: 184  VGKTTTIAKVVNMLKKNNLSTIIAASDTFRAAAQEQLAYHASKLEVQLIRGKYGADPASV 243

Query: 1577 AKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVD 1756
            A +AI  A     DVVL+DTAGRM  +  L+  L +++ + KPD  + + ++L G+DA++
Sbjct: 244  AFDAISFAKSRNIDVVLIDTAGRMHIDSDLVEELKRVLRIAKPDFRILILDSLAGSDALE 303

Query: 1757 QLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYT 1936
            Q   F   +            D ++LTK D  D K G ALS+ Y    PV+++G GQ+Y 
Sbjct: 304  QARHFENNVG----------YDAVILTKVDA-DAKGGIALSLAYELKKPVVYMGVGQNYD 352

Query: 1937 DL 1942
            DL
Sbjct: 353  DL 354

---

>Q54431:SRP54_STRMU Signal recognition particle protein - Streptococcus mutans|
          Length = 516

 Score =  126 bits (316), Expect = 4e-28
 Identities = 80/290 (27%), Positives = 145/290 (50%), Gaps = 1/290 (0%)
 Frame = +2

Query: 1079 MFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRIS 1258
            +FK++ G   L + D+Q   K ++  L+  +VA  + ++  + V     G ++      S
Sbjct: 13   VFKNLRGKRKLSEKDVQEVTKEIRLALLEADVALPVVKEFIKRVRKRAVGHEVIDTLDPS 72

Query: 1259 STVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYWL 1438
              +   + E L  +L    +       +  K    P            K+T   K+A  L
Sbjct: 73   QQIIKIVNEELTAVLGSETA-------EIEKSSKIPTIIMMVGLQGAGKTTFAGKLANKL 125

Query: 1439 L-QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKS 1615
            + + N   +M A D +R  A++QL+T  +++ +P+F+ G E     +  + + +A  N++
Sbjct: 126  VKEENARPLMIAADIYRPAAIDQLKTLGQQINVPVFDMGTEHSAVEIVSQGLAQAKENRN 185

Query: 1616 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLS 1795
            D VL+DTAGR+Q +E LM  L  +  L  P+ +L V ++++G +A +   +FNQ+L    
Sbjct: 186  DYVLIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLE--- 242

Query: 1796 TVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLK 1945
                   + G++LTK D  D + GAALS+  I+G P+ F G G+  TD++
Sbjct: 243  -------VTGVILTKIDG-DTRGGAALSVRQITGKPIKFTGTGEKITDIE 284

---

>P56005:SRP54_HELPY Signal recognition particle protein - Helicobacter pylori|
            (Campylobacter pylori)
          Length = 448

 Score =  124 bits (312), Expect = 1e-27
 Identities = 94/322 (29%), Positives = 162/322 (50%), Gaps = 2/322 (0%)
 Frame = +2

Query: 1112 EKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQTAMEEAL 1291
            ++  L  AL  LK  L+  +V  ++A +L + V +  +   +G    +      A+E++L
Sbjct: 21   DEKALDRALDELKKTLLKNDVHHKVARELLKKVESQTKLNGIGKQQFLD-----ALEKSL 75

Query: 1292 LRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYWLLQHNLSVMMAA 1471
            L IL+ + S            +  P            K+T  AK+A++L   N  V++ A
Sbjct: 76   LEILSAKGSSGF------TFAQTPPTVVLMAGLQGSGKTTTTAKLAHYLKTKNKKVLLCA 129

Query: 1472 CDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAV--VAKEAIQEATRNKSDVVLVDTAGR 1645
            CD  R  AVEQL+    ++ + +F   YE++ +V  +A  A++ A   + DV+LVD+AGR
Sbjct: 130  CDLQRLAAVEQLKVLGEQVGVEVF---YEENKSVKEIASNALKRAKEAQFDVLLVDSAGR 186

Query: 1646 MQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDG 1825
            +  ++ LM+ L ++  +  P  VL+V +AL G D V   N FN+++           + G
Sbjct: 187  LAIDKELMQELKEVKEILNPHEVLYVADALSGQDGVKSANTFNEEIG----------VSG 236

Query: 1826 ILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLLK*NGSSTC 2005
            ++L+KFD+ D K G AL + Y  G P+ F+G G+   DL     + IV  L+   G+   
Sbjct: 237  VVLSKFDS-DSKGGIALGITYQLGLPLRFIGSGEKIPDLDVFVPERIVGRLM---GAGDI 292

Query: 2006 RAPICAAYQRVSVISPNIPRDI 2071
               +  A +  SV++PN  +D+
Sbjct: 293  ---VSLAEKTASVLNPNEAKDL 311

---

>Q9ZK62:SRP54_HELPJ Signal recognition particle protein - Helicobacter pylori J99|
            (Campylobacter pylori J99)
          Length = 448

 Score =  123 bits (309), Expect = 3e-27
 Identities = 92/320 (28%), Positives = 158/320 (49%)
 Frame = +2

Query: 1112 EKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQTAMEEAL 1291
            ++  L  AL  LK  L+  +V  ++A +L + V +  +   +G    +      A+E++L
Sbjct: 21   DEKALDRALDELKKTLLKNDVHHKVARELLKKVESQTKAGGIGKQQFLD-----ALEKSL 75

Query: 1292 LRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYWLLQHNLSVMMAA 1471
            L IL+ + S            +  P            K+T  AK+A++L   N  V++ A
Sbjct: 76   LEILSAKGSSGF------TFAQTPPTVVLMAGLQGSGKTTTTAKLAHYLKTKNKKVLLCA 129

Query: 1472 CDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGRMQ 1651
            CD  R  AVEQL+    ++ + +F +   K    +A  A++ A   + DV++VD+AGR+ 
Sbjct: 130  CDLQRLAAVEQLKVLGEQVGVEVFHEE-NKSVKEIANNALKRAKEAQFDVLIVDSAGRLA 188

Query: 1652 DNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGIL 1831
             ++ LM+ L ++  +  P  VL+V +AL G D V   N FN+++           + G++
Sbjct: 189  IDKELMQELKEVKEVLNPHEVLYVADALSGQDGVKSANTFNEEIG----------VSGVV 238

Query: 1832 LTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLLK*NGSSTCRA 2011
            L+KFD+ D K G AL + Y  G P+ F+G G+   DL     + IV  L+   G+     
Sbjct: 239  LSKFDS-DSKGGIALGITYQLGLPLRFIGSGEKIPDLDVFMPERIVGRLM---GAGDI-- 292

Query: 2012 PICAAYQRVSVISPNIPRDI 2071
             I  A +  SV++PN  +D+
Sbjct: 293  -ISLAEKTASVLNPNEAKDL 311

---

>P74214:SRP54_SYNY3 Signal recognition particle protein - Synechocystis sp. (strain PCC|
            6803)
          Length = 482

 Score =  120 bits (302), Expect = 2e-26
 Identities = 76/288 (26%), Positives = 147/288 (51%)
 Frame = +2

Query: 1082 FKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISS 1261
            +K + G + + +S+++ AL+ ++  L+  +V  ++ +   + V     G  + S      
Sbjct: 13   WKKLRGQDKISESNIKEALQEVRRALLAADVNLQVVKGFIKDVEQKALGADVISGVNPGQ 72

Query: 1262 TVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYWLL 1441
                 + + L+ ++          +V  A+    P            K+T  AK+A +L 
Sbjct: 73   QFIKIVYDELVNLMGES-------NVPLAQAEQAPTVILMAGLQGTGKTTATAKLALYLR 125

Query: 1442 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 1621
            +   S +M A D +R  A++QL+T  +++ +P+F+ G + +P  +A++ +++A     D 
Sbjct: 126  KQKRSALMVATDVYRPAAIDQLKTLGQQIDVPVFDLGSDANPVEIARQGVEKAKELGVDT 185

Query: 1622 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTV 1801
            VL+DTAGR+Q +  +M  L+++  + KPD  L V +A+ G +A +  + F++++      
Sbjct: 186  VLIDTAGRLQIDPQMMAELAEIKQVVKPDDTLLVVDAMTGQEAANLTHTFHEQIG----- 240

Query: 1802 PTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLK 1945
                 I G +LTK D  D + GAALS+  ISG P+ FVG G+    L+
Sbjct: 241  -----ITGAILTKLDG-DTRGGAALSVRQISGQPIKFVGVGEKVEALQ 282

---

>P49970:SR543_HORVU Signal recognition particle 54 kDa protein 3 - Hordeum vulgare|
            (Barley)
          Length = 493

 Score =  120 bits (302), Expect = 2e-26
 Identities = 78/292 (26%), Positives = 140/292 (47%)
 Frame = +2

Query: 1106 VLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQTAMEE 1285
            V+++S L+  L  +   LM  +V  +    L  ++  ++  + L + T     ++T++ +
Sbjct: 21   VVDESVLRECLNEIARALMQSDVRFKTVCDLQANIRKTVNLEALAAGTNKRRIIETSVGK 80

Query: 1286 ALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYWLLQHNLSVMM 1465
             L ++L   +   +        ++GKP            K+T   K A++  +      +
Sbjct: 81   ELCKMLDTGKPAFV-------PKKGKPNVVMFVGLQGSGKTTTCTKYAHYHQRKGFKPSL 133

Query: 1466 AACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGR 1645
               DTFR+GA +QL+ +A + +IP +    E DP  +A E +++  + KSD++++DT+GR
Sbjct: 134  VCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLEKFRQEKSDLIIIDTSGR 193

Query: 1646 MQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDG 1825
                  L   + ++    KPDLV+FV +  +G  A DQ   F Q  +          +  
Sbjct: 194  HMQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSAS----------VGA 243

Query: 1826 ILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 1981
            +++TK D    K G ALS V  + SPV+F+G G+   D    NV+  V  LL
Sbjct: 244  VIVTKLDG-HAKGGGALSAVAATKSPVIFIGTGEHIDDFDVFNVEPFVARLL 294

---

>P49969:SR542_HORVU Signal recognition particle 54 kDa protein 2 - Hordeum vulgare|
            (Barley)
          Length = 497

 Score =  119 bits (299), Expect = 4e-26
 Identities = 78/306 (25%), Positives = 139/306 (45%)
 Frame = +2

Query: 1064 GWFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGS 1243
            G  S     ++   V+++  L   L  +   L+  +V  ++   +  ++   +  + L +
Sbjct: 8    GSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIVNLETLAA 67

Query: 1244 FTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAK 1423
             T     +Q A+   L  +L P +            ++GKP            K+T   K
Sbjct: 68   GTNKRRIIQQAVFTELCNMLDPGKPA-------FTPKKGKPSVVMFVGLQGSGKTTTCTK 120

Query: 1424 VAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEAT 1603
             AY+  +      +   DTFR+GA +QL+ +A + +IP +    E DP  +A E ++   
Sbjct: 121  YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180

Query: 1604 RNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKL 1783
            +  SD++++DT+GR +    L   + ++    KPDLV+FV +  +G  A DQ   F Q  
Sbjct: 181  KENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240

Query: 1784 ADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKS 1963
            +          +  +++TK D    K G ALS V  + SPV+F+G G+   + +  +VK 
Sbjct: 241  S----------VGAVIITKLDG-HAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKP 289

Query: 1964 IVKTLL 1981
             V  LL
Sbjct: 290  FVSRLL 295

---

>P49971:SR541_SOLLC Signal recognition particle 54 kDa protein 1 - Solanum lycopersicum|
            (Tomato) (Lycopersicon esculentum)
          Length = 496

 Score =  119 bits (299), Expect = 4e-26
 Identities = 79/307 (25%), Positives = 142/307 (46%), Gaps = 1/307 (0%)
 Frame = +2

Query: 1064 GWFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGS 1243
            G  S   + ++   ++++  L   L  +   L+  +V  ++   +  ++   +  + L +
Sbjct: 8    GSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMSTNIKKIVNLEDLAA 67

Query: 1244 FTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAK 1423
                   +Q A+   L +IL P +    L+       +GKP            K+T   K
Sbjct: 68   GHNKRRIIQQAVYNELCKILDPGKPAFTLK-------KGKPSVVMFVGLQGSGKTTTCTK 120

Query: 1424 VAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGY-EKDPAVVAKEAIQEA 1600
             AY   +      +   DTFR+GA +QL+ +A + +IP +   Y E DP  +A + ++  
Sbjct: 121  YAYHHQKRGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSSYTESDPVKIAVDGVETF 180

Query: 1601 TRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQK 1780
             +   D+++VDT+GR +    L   + ++    KPDLV+FV ++ +G  A DQ   F Q 
Sbjct: 181  KKENCDLIIVDTSGRHKQEAALFEEMRQVSEAQKPDLVIFVMDSSIGQAAFDQAQAFRQS 240

Query: 1781 LADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVK 1960
            +A          +  +++TK D    K G ALS V  + SPV+F+G G+   + +  +VK
Sbjct: 241  VA----------VGAVIVTKMDG-HAKGGGALSRVAATKSPVIFIGTGEHMDEFEVFDVK 289

Query: 1961 SIVKTLL 1981
              V  LL
Sbjct: 290  PFVSRLL 296

---

>P49968:SR541_HORVU Signal recognition particle 54 kDa protein 1 - Hordeum vulgare|
            (Barley)
          Length = 497

 Score =  119 bits (299), Expect = 4e-26
 Identities = 78/306 (25%), Positives = 139/306 (45%)
 Frame = +2

Query: 1064 GWFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGS 1243
            G  S     ++   V+++  L   L  +   L+  +V  ++   +  ++   +  + L +
Sbjct: 8    GSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIVNLETLAA 67

Query: 1244 FTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAK 1423
             T     +Q A+   L  +L P +            ++GKP            K+T   K
Sbjct: 68   GTNKRRIIQQAVFTELCNMLDPGKPA-------FTTKKGKPSVVMFVGLQGSGKTTTCTK 120

Query: 1424 VAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEAT 1603
             AY+  +      +   DTFR+GA +QL+ +A + +IP +    E DP  +A E ++   
Sbjct: 121  YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180

Query: 1604 RNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKL 1783
            +  SD++++DT+GR +    L   + ++    KPDLV+FV +  +G  A DQ   F Q  
Sbjct: 181  KENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240

Query: 1784 ADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKS 1963
            +          +  +++TK D    K G ALS V  + SPV+F+G G+   + +  +VK 
Sbjct: 241  S----------VGAVIITKLDG-HAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKP 289

Query: 1964 IVKTLL 1981
             V  LL
Sbjct: 290  FVSRLL 295

---

>P49972:SR542_SOLLC Signal recognition particle 54 kDa protein 2 - Solanum lycopersicum|
            (Tomato) (Lycopersicon esculentum)
          Length = 499

 Score =  119 bits (297), Expect = 7e-26
 Identities = 77/306 (25%), Positives = 140/306 (45%)
 Frame = +2

Query: 1064 GWFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGS 1243
            G  S   + ++   ++++  L   L  +   L+  +V  ++   +  ++   +    L +
Sbjct: 8    GSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMTTNIKKIVNLDDLAA 67

Query: 1244 FTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAK 1423
                   +Q A+   L +IL P +            ++GKP            K+T   K
Sbjct: 68   GHNKRRIIQQAVFNELCKILDPGKP-------SFTPKKGKPSIVMFVGLQGSGKTTTCTK 120

Query: 1424 VAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEAT 1603
             AY+  +      +   DTFR+GA +QL+ +A + +IP +    E DP  +A + ++   
Sbjct: 121  YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVDGVETFK 180

Query: 1604 RNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKL 1783
            +   D+++VDT+GR +    L   + ++    KPDLV+FV ++ +G  A DQ   F Q +
Sbjct: 181  KENCDLIIVDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 1784 ADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKS 1963
            A          +  +++TK D    K G ALS V  + SPV+F+G G+   + +  +VK 
Sbjct: 241  A----------VGAVIVTKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 289

Query: 1964 IVKTLL 1981
             V  LL
Sbjct: 290  FVSRLL 295

---

>Q55311:SRP54_SYNP7 Signal sequence-binding protein - Synechococcus sp. (strain PCC 7942)|
            (Anacystis nidulans R2)
          Length = 485

 Score =  118 bits (295), Expect = 1e-25
 Identities = 76/297 (25%), Positives = 147/297 (49%)
 Frame = +2

Query: 1091 IAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQ 1270
            + G + + +S++Q ALK ++  L+  +V   + ++    V     G ++ S  R      
Sbjct: 16   LRGQDKISESNVQEALKEVRRALLEADVNLGVVKEFIAQVQEKAVGTQVISGIRPDQQFI 75

Query: 1271 TAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYWLLQHN 1450
              + + L++++           V  A+    P            K+T  AK+A  L +  
Sbjct: 76   KVVYDELVQVMGETH-------VPLAQAAKAPTVILMAGLQGAGKTTATAKLALHLRKEG 128

Query: 1451 LSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLV 1630
             S ++ A D +R  A++QL T  +++ +P+FE G + +P  +A++ +++A +   D V+V
Sbjct: 129  RSTLLVATDVYRPAAIDQLITLGKQIDVPVFELGSDANPVEIARQGVEKARQEGIDTVIV 188

Query: 1631 DTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTA 1810
            DTAGR+Q +  +M  L+++     P  VL V ++++G +A      F++++         
Sbjct: 189  DTAGRLQIDTEMMEELAQVKEAIAPHEVLLVVDSMIGQEAASLTRSFHERIG-------- 240

Query: 1811 RLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 1981
              I G +LTK D  D + GAALS+  +SG P+ FVG G+    L+  + + +   +L
Sbjct: 241  --ITGAILTKLDG-DSRGGAALSIRRVSGQPIKFVGLGEKVEALQPFHPERMASRIL 294

---

>Q01442:SRP54_MYCMY Signal recognition particle protein - Mycoplasma mycoides|
          Length = 447

 Score =  118 bits (295), Expect = 1e-25
 Identities = 83/296 (28%), Positives = 146/296 (49%), Gaps = 2/296 (0%)
 Frame = +2

Query: 1100 NNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQTAM 1279
            N+ L + +++  LK ++  L+  +V  E A+++  +V     G  +         +   +
Sbjct: 21   NSTLNEENIKETLKEIRLSLLEADVNIEAAKEIINNVKQKALGGYISEGASAHQQMIKIV 80

Query: 1280 EEALLRILTPRRS-IDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYWLLQHNLS 1456
             E L+ IL    + +DI +         KP            K+T   K+AY L + N  
Sbjct: 81   HEELVNILGKENAPLDINK---------KPSVVMMVGLQGSGKTTTANKLAYLLNKKNKK 131

Query: 1457 -VMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVD 1633
             V++   D +R GA+EQL    ++    +FEKG ++DP   A++A++ A  N  DVV++D
Sbjct: 132  KVLLVGLDIYRPGAIEQLVQLGQKTNTQVFEKG-KQDPVKTAEQALEYAKENNFDVVILD 190

Query: 1634 TAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTAR 1813
            TAGR+Q ++ LM+ L  L     P+ +L V + + G + ++  N+FN KL          
Sbjct: 191  TAGRLQVDQVLMKELDNLKKKTSPNEILLVVDGMSGQEIINVTNEFNDKLK--------- 241

Query: 1814 LIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 1981
             + G+++TK D  D + GA LS+ Y++  P+ F+G G+ Y  L     K +   L+
Sbjct: 242  -LSGVVVTKLDG-DARGGATLSISYLTKLPIKFIGEGEGYNALAAFYPKRMADRLM 295

---

>Q5R4R6:SRP54_PONPY Signal recognition particle 54 kDa protein - Pongo pygmaeus|
            (Orangutan)
          Length = 504

 Score =  116 bits (291), Expect = 3e-25
 Identities = 75/315 (23%), Positives = 155/315 (49%), Gaps = 1/315 (0%)
 Frame = +2

Query: 1040 AEAGQKKKGWFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAAS 1219
            A+ G+K     +S  +S++   ++ +  L   LK +   L+  +V  ++ ++L E+V ++
Sbjct: 4    ADLGRK----ITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSA 59

Query: 1220 LEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQA-AKERGKPYXXXXXXXXX 1396
            ++ +++ S       +Q A+ + L++++ P         V+A    +GK           
Sbjct: 60   IDLEEMASGLNKRKMIQHAVFKELVKLVDP--------GVKAWTPTKGKQNVIMFVGLQG 111

Query: 1397 XXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVV 1576
              K+T  +K+AY+  +      +   DTFR+GA +QL+ +A + +IP +    E DP ++
Sbjct: 112  SGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVII 171

Query: 1577 AKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVD 1756
            A E +++      ++++VDT+GR +  + L   + ++ N  +PD +++V +A +G     
Sbjct: 172  ASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEA 231

Query: 1757 QLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYT 1936
            Q   F  K+           +  +++TK D    K G ALS V  + SP++F+G G+   
Sbjct: 232  QAKAFKDKVD----------VASVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHID 280

Query: 1937 DLKKLNVKSIVKTLL 1981
            D +    +  +  LL
Sbjct: 281  DFEPFKTQPFISKLL 295

---

>Q4R965:SRP54_MACFA Signal recognition particle 54 kDa protein - Macaca fascicularis|
            (Crab eating macaque) (Cynomolgus monkey)
          Length = 504

 Score =  116 bits (291), Expect = 3e-25
 Identities = 75/315 (23%), Positives = 155/315 (49%), Gaps = 1/315 (0%)
 Frame = +2

Query: 1040 AEAGQKKKGWFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAAS 1219
            A+ G+K     +S  +S++   ++ +  L   LK +   L+  +V  ++ ++L E+V ++
Sbjct: 4    ADLGRK----ITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSA 59

Query: 1220 LEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQA-AKERGKPYXXXXXXXXX 1396
            ++ +++ S       +Q A+ + L++++ P         V+A    +GK           
Sbjct: 60   IDLEEMASGLNKRKMIQHAVFKELVKLVDP--------GVKAWTPTKGKQNVIMFVGLQG 111

Query: 1397 XXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVV 1576
              K+T  +K+AY+  +      +   DTFR+GA +QL+ +A + +IP +    E DP ++
Sbjct: 112  SGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVII 171

Query: 1577 AKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVD 1756
            A E +++      ++++VDT+GR +  + L   + ++ N  +PD +++V +A +G     
Sbjct: 172  ASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEA 231

Query: 1757 QLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYT 1936
            Q   F  K+           +  +++TK D    K G ALS V  + SP++F+G G+   
Sbjct: 232  QAKAFKDKVD----------VASVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHID 280

Query: 1937 DLKKLNVKSIVKTLL 1981
            D +    +  +  LL
Sbjct: 281  DFEPFKTQPFISKLL 295

---

>P61011:SRP54_HUMAN Signal recognition particle 54 kDa protein - Homo sapiens (Human)|
          Length = 504

 Score =  116 bits (291), Expect = 3e-25
 Identities = 75/315 (23%), Positives = 155/315 (49%), Gaps = 1/315 (0%)
 Frame = +2

Query: 1040 AEAGQKKKGWFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAAS 1219
            A+ G+K     +S  +S++   ++ +  L   LK +   L+  +V  ++ ++L E+V ++
Sbjct: 4    ADLGRK----ITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSA 59

Query: 1220 LEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQA-AKERGKPYXXXXXXXXX 1396
            ++ +++ S       +Q A+ + L++++ P         V+A    +GK           
Sbjct: 60   IDLEEMASGLNKRKMIQHAVFKELVKLVDP--------GVKAWTPTKGKQNVIMFVGLQG 111

Query: 1397 XXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVV 1576
              K+T  +K+AY+  +      +   DTFR+GA +QL+ +A + +IP +    E DP ++
Sbjct: 112  SGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVII 171

Query: 1577 AKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVD 1756
            A E +++      ++++VDT+GR +  + L   + ++ N  +PD +++V +A +G     
Sbjct: 172  ASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEA 231

Query: 1757 QLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYT 1936
            Q   F  K+           +  +++TK D    K G ALS V  + SP++F+G G+   
Sbjct: 232  QAKAFKDKVD----------VASVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHID 280

Query: 1937 DLKKLNVKSIVKTLL 1981
            D +    +  +  LL
Sbjct: 281  DFEPFKTQPFISKLL 295

---

>P61010:SRP54_CANFA Signal recognition particle 54 kDa protein - Canis familiaris (Dog)|
          Length = 504

 Score =  116 bits (291), Expect = 3e-25
 Identities = 75/315 (23%), Positives = 155/315 (49%), Gaps = 1/315 (0%)
 Frame = +2

Query: 1040 AEAGQKKKGWFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAAS 1219
            A+ G+K     +S  +S++   ++ +  L   LK +   L+  +V  ++ ++L E+V ++
Sbjct: 4    ADLGRK----ITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSA 59

Query: 1220 LEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQA-AKERGKPYXXXXXXXXX 1396
            ++ +++ S       +Q A+ + L++++ P         V+A    +GK           
Sbjct: 60   IDLEEMASGLNKRKMIQHAVFKELVKLVDP--------GVKAWTPTKGKQNVIMFVGLQG 111

Query: 1397 XXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVV 1576
              K+T  +K+AY+  +      +   DTFR+GA +QL+ +A + +IP +    E DP ++
Sbjct: 112  SGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVII 171

Query: 1577 AKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVD 1756
            A E +++      ++++VDT+GR +  + L   + ++ N  +PD +++V +A +G     
Sbjct: 172  ASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEA 231

Query: 1757 QLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYT 1936
            Q   F  K+           +  +++TK D    K G ALS V  + SP++F+G G+   
Sbjct: 232  QAKAFKDKVD----------VASVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHID 280

Query: 1937 DLKKLNVKSIVKTLL 1981
            D +    +  +  LL
Sbjct: 281  DFEPFKTQPFISKLL 295

---

>P57473:SRP54_BUCAI Signal recognition particle protein - Buchnera aphidicola subsp.|
            Acyrthosiphon pisum (Acyrthosiphon pisum symbiotic
            bacterium)
          Length = 451

 Score =  116 bits (291), Expect = 3e-25
 Identities = 78/305 (25%), Positives = 148/305 (48%), Gaps = 2/305 (0%)
 Frame = +2

Query: 1073 SSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLG-SFT 1249
            S   K I     L + +++  ++ ++  L+  +VA  + +K  E+V     G ++  S T
Sbjct: 10   SDSLKKILNKGRLTEENIKETIREVRKALLEADVALSVIKKFIENVKKKSIGHEINKSLT 69

Query: 1250 RISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVA 1429
                 ++    E +  +     S++   +         P            K+T+LAK+ 
Sbjct: 70   PGQEFIKIVKHELIFAMGEKNHSLNFSIE--------PPAVILVVGLQGSGKTTSLAKLG 121

Query: 1430 YWLL-QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATR 1606
             W+  ++   +++ + DT+R+ A+EQL+  + +++I  FE      P  + K AI+ A  
Sbjct: 122  KWIKNKYKKKILITSTDTYRAAAIEQLKILSDQIEIDFFESDKHHTPIEITKNAIKYAKL 181

Query: 1607 NKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLA 1786
               DV+L+DTAGR+  ++ +M  + ++  ++K    L + ++++G DA++    FN  L 
Sbjct: 182  KLYDVLLIDTAGRLHIDKKMMNEIQQIQVISKAIETLLIVDSMMGQDAINMAKIFNNDL- 240

Query: 1787 DLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSI 1966
                     LI GI+LTK D  D + G ALSM YI+G P+ F+G G+    L+  + + I
Sbjct: 241  ---------LISGIILTKTDG-DSRSGIALSMRYITGKPIKFIGTGEKIISLEPFHPERI 290

Query: 1967 VKTLL 1981
               +L
Sbjct: 291  ADRIL 295

---

>Q2T9U1:SRP54_BOVIN Signal recognition particle 54 kDa protein - Bos taurus (Bovine)|
          Length = 504

 Score =  116 bits (291), Expect = 3e-25
 Identities = 75/315 (23%), Positives = 155/315 (49%), Gaps = 1/315 (0%)
 Frame = +2

Query: 1040 AEAGQKKKGWFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAAS 1219
            A+ G+K     +S  +S++   ++ +  L   LK +   L+  +V  ++ ++L E+V ++
Sbjct: 4    ADLGRK----ITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSA 59

Query: 1220 LEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQA-AKERGKPYXXXXXXXXX 1396
            ++ +++ S       +Q A+ + L++++ P         V+A    +GK           
Sbjct: 60   IDLEEMASGLNKRKMIQHAVFKELVKLVDP--------GVKAWTPTKGKQNVIMFVGLQG 111

Query: 1397 XXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVV 1576
              K+T  +K+AY+  +      +   DTFR+GA +QL+ +A + +IP +    E DP ++
Sbjct: 112  SGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVII 171

Query: 1577 AKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVD 1756
            A E +++      ++++VDT+GR +  + L   + ++ N  +PD +++V +A +G     
Sbjct: 172  ASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIVYVMDASIGQACEA 231

Query: 1757 QLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYT 1936
            Q   F  K+           +  +++TK D    K G ALS V  + SP++F+G G+   
Sbjct: 232  QAKAFKDKVD----------VASVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHID 280

Query: 1937 DLKKLNVKSIVKTLL 1981
            D +    +  +  LL
Sbjct: 281  DFEPFKTQPFISKLL 295

---

>P14576:SRP54_MOUSE Signal recognition particle 54 kDa protein - Mus musculus (Mouse)|
          Length = 504

 Score =  116 bits (290), Expect = 5e-25
 Identities = 75/315 (23%), Positives = 155/315 (49%), Gaps = 1/315 (0%)
 Frame = +2

Query: 1040 AEAGQKKKGWFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAAS 1219
            A+ G+K     +S  +S++   ++ +  L   LK +   L+  +V  ++ ++L E+V ++
Sbjct: 4    ADLGRK----ITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSA 59

Query: 1220 LEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQA-AKERGKPYXXXXXXXXX 1396
            ++ +++ S       +Q A+ + L++++ P         V+A    +GK           
Sbjct: 60   IDLEEMASGLNKRKMIQHAVFKELVKLVDP--------GVKAWTPTKGKQNVIMFVGLQG 111

Query: 1397 XXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVV 1576
              K+T  +K+AY+  +      +   DTFR+GA +QL+ +A + +IP +    E DP ++
Sbjct: 112  SGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVII 171

Query: 1577 AKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVD 1756
            A E +++      ++++VDT+GR +  + L   + ++ N  +PD +++V +A +G     
Sbjct: 172  ASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEA 231

Query: 1757 QLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYT 1936
            Q   F  K+           +  +++TK D    K G ALS V  + SP++F+G G+   
Sbjct: 232  QAKAFKDKVD----------VASVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHID 280

Query: 1937 DLKKLNVKSIVKTLL 1981
            D +    +  +  LL
Sbjct: 281  DFEPFKTQPFISKLL 295

---

>Q6AYB5:SRP54_RAT Signal recognition particle 54 kDa protein - Rattus norvegicus (Rat)|
          Length = 504

 Score =  115 bits (289), Expect = 6e-25
 Identities = 75/315 (23%), Positives = 155/315 (49%), Gaps = 1/315 (0%)
 Frame = +2

Query: 1040 AEAGQKKKGWFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAAS 1219
            A+ G+K     +S  +S++   ++ +  L   LK +   L+  +V  ++ ++L E+V ++
Sbjct: 4    ADLGRK----ITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSA 59

Query: 1220 LEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQA-AKERGKPYXXXXXXXXX 1396
            ++ +++ S       +Q A+ + L++++ P         V+A    +GK           
Sbjct: 60   IDLEEMASGLNKRKMIQHAVFKELVKLVDP--------GVKAWTPTKGKQNVIMFVGLQG 111

Query: 1397 XXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVV 1576
              K+T  +K+AY+  +      +   DTFR+GA +QL+ +A + +IP +    E DP ++
Sbjct: 112  SGKTTTCSKLAYFYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVII 171

Query: 1577 AKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVD 1756
            A E +++      ++++VDT+GR +  + L   + ++ N  +PD +++V +A +G     
Sbjct: 172  ASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEA 231

Query: 1757 QLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYT 1936
            Q   F  K+           +  +++TK D    K G ALS V  + SP++F+G G+   
Sbjct: 232  QAKAFKDKVD----------VASVIVTKLDG-HAKGGGALSAVAATKSPIIFIGTGEHID 280

Query: 1937 DLKKLNVKSIVKTLL 1981
            D +    +  +  LL
Sbjct: 281  DFEPFKTQPFISKLL 295

---

>O15821:SRP54_ENTHI Signal recognition particle 54 kDa protein - Entamoeba histolytica|
          Length = 487

 Score =  115 bits (289), Expect = 6e-25
 Identities = 70/300 (23%), Positives = 145/300 (48%), Gaps = 1/300 (0%)
 Frame = +2

Query: 1085 KSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISST 1264
            + +  + V+++  +   LK ++  L+ ++V      ++  ++   +  + +         
Sbjct: 15   RKMTSSTVVDEEVINTLLKEIETSLLGEDVNPIFIRQMVNNIKKKINSEDIPDGIDKRKL 74

Query: 1265 VQTAMEEALLRILTPRRSIDILRDVQAAK-ERGKPYXXXXXXXXXXXKSTNLAKVAYWLL 1441
            ++ ++ E L+ ++ P+         +A K ++GK             K+T + K+A +  
Sbjct: 75   IKDSVFEELINLVDPK--------TEAFKPKKGKTCVLMMVGLQGAGKTTTITKLALYYK 126

Query: 1442 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 1621
                   +   DTFR+GA EQL+ +A+R  +P F    E DP  VA E ++   + K+D+
Sbjct: 127  NRGYKPAVVGADTFRAGAYEQLQMNAKRAGVPFFGIKEESDPVKVASEGVRTFRKEKNDI 186

Query: 1622 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTV 1801
            +LVDT+GR + ++ L + +  + +  KPD ++FV +  +G  A  Q   F   +      
Sbjct: 187  ILVDTSGRHKQDKELFKEMQSVRDAIKPDSIIFVMDGAIGQAAFGQAKAFKDAVE----- 241

Query: 1802 PTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 1981
                 +  +++TK D      G ALS V  + SP++F+G G+   ++++ + +S V+ LL
Sbjct: 242  -----VGSVIITKLDG-HSNGGGALSAVAATKSPIIFIGTGEKVNEIEEFDAESFVRQLL 295

---

>P37107:SR54C_ARATH Signal recognition particle 54 kDa protein, chloroplast precursor -|
            Arabidopsis thaliana (Mouse-ear cress)
          Length = 564

 Score =  115 bits (289), Expect = 6e-25
 Identities = 81/302 (26%), Positives = 148/302 (49%)
 Frame = +2

Query: 1040 AEAGQKKKGWFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAAS 1219
            AE   +  G   + +  + G  VL K ++   ++ ++  L+  +V+  +  +  +SV+  
Sbjct: 75   AEMFGQLTGGLEAAWSKLKGEEVLTKDNIAEPMRDIRRALLEADVSLPVVRRFVQSVSDQ 134

Query: 1220 LEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXX 1399
              G  +    +    +   + + L++++    S     ++Q AK    P           
Sbjct: 135  AVGMGVIRGVKPDQQLVKIVHDELVKLMGGEVS-----ELQFAKSG--PTVILLAGLQGV 187

Query: 1400 XKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVA 1579
             K+T  AK+A +L +   S M+ A D +R  A++QL     ++ +P++  G +  PA +A
Sbjct: 188  GKTTVCAKLACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGTDVKPADIA 247

Query: 1580 KEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQ 1759
            K+ ++EA +N  DVV++DTAGR+Q ++ +M  L  +     P  VL V +A+ G +A   
Sbjct: 248  KQGLKEAKKNNVDVVIMDTAGRLQIDKGMMDELKDVKKFLNPTEVLLVVDAMTGQEAAAL 307

Query: 1760 LNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTD 1939
            +  FN ++           I G +LTK D  D + GAALS+  +SG P+  VG G+   D
Sbjct: 308  VTTFNVEIG----------ITGAILTKLDG-DSRGGAALSVKEVSGKPIKLVGRGERMED 356

Query: 1940 LK 1945
            L+
Sbjct: 357  LE 358

---

>P37106:SR541_ARATH Signal recognition particle 54 kDa protein 1 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 479

 Score =  114 bits (286), Expect = 1e-24
 Identities = 74/292 (25%), Positives = 138/292 (47%)
 Frame = +2

Query: 1106 VLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQTAMEE 1285
            ++++  L   L  +   L+  +V+  + EK+  ++   +    L +       ++ A+ +
Sbjct: 22   IIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIVNLDDLAAGHNKRLIIEQAIFK 81

Query: 1286 ALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYWLLQHNLSVMM 1465
             L R+L P +          A ++ KP            K+T   K AY+  +      +
Sbjct: 82   ELCRMLDPGKPA-------FAPKKAKPSVVMFVGLQGAGKTTTCTKYAYYHQKKGYKAAL 134

Query: 1466 AACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGR 1645
               DTFR+GA +QL+ +A + +IP +    E DP  +A E +    + K D+++VDT+GR
Sbjct: 135  VCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFKKEKCDLIIVDTSGR 194

Query: 1646 MQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDG 1825
             +    L   + ++    +PDLV+FV ++ +G  A +Q   F + ++          +  
Sbjct: 195  HKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETVS----------VGA 244

Query: 1826 ILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 1981
            +++TK D    K G ALS V  + SPV+F+G G+   + +  +VK  V  LL
Sbjct: 245  VIITKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295

---

>P49967:SR543_ARATH Signal recognition particle 54 kDa protein 3 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 495

 Score =  114 bits (285), Expect = 2e-24
 Identities = 74/306 (24%), Positives = 141/306 (46%)
 Frame = +2

Query: 1064 GWFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGS 1243
            G  +   + ++   ++++  L   L  +   L+  +V+  + +++  ++   +  + L +
Sbjct: 8    GRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIVNLEDLAA 67

Query: 1244 FTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAK 1423
                   ++ A+   L ++L P +          A ++ K             K+T   K
Sbjct: 68   GHNKRRIIEQAIFSELCKMLDPGKPA-------FAPKKAKASVVMFVGLQGAGKTTTCTK 120

Query: 1424 VAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEAT 1603
             AY+  +      +   DTFR+GA +QL+ +A + +IP +    E DP  +A E +    
Sbjct: 121  YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180

Query: 1604 RNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKL 1783
            +   D+++VDT+GR +    L   + ++    KPDLV+FV ++ +G  A DQ   F Q +
Sbjct: 181  KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 1784 ADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKS 1963
            A          +  +++TK D    K G ALS V  + SPV+F+G G+   + +  +VK 
Sbjct: 241  A----------VGAVIITKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKP 289

Query: 1964 IVKTLL 1981
             V  LL
Sbjct: 290  FVSRLL 295

---

>Q8MZJ6:SRP54_GEOCY Signal recognition particle 54 kDa protein - Geodia cydonium (Sponge)|
          Length = 499

 Score =  114 bits (284), Expect = 2e-24
 Identities = 73/292 (25%), Positives = 140/292 (47%)
 Frame = +2

Query: 1106 VLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQTAMEE 1285
            V+ +  LQ  LK +   L+  +V  ++  KL ++V A+++ + +G+       +QT++  
Sbjct: 21   VINEEVLQAMLKEICTALLEADVNVKLVGKLRQNVRAAIDFEDMGAGLSKRRIIQTSVFN 80

Query: 1286 ALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYWLLQHNLSVMM 1465
             L ++L P   + +         +G              K+T   K+AY   +      +
Sbjct: 81   ELCKLLDP--GVPVWHPT-----KGHSNVIMFVGLQGSGKTTTCTKLAYHYQKKGWKTCL 133

Query: 1466 AACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGR 1645
               DTFR+GA +QL+ +A + ++P +    E DP V+A+E +++   +  +V++VDT+GR
Sbjct: 134  VCADTFRAGAFDQLKQNATKARVPFYGSYTEMDPVVIAQEGVEKFKEDSFEVIIVDTSGR 193

Query: 1646 MQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDG 1825
             +  E L   + ++     PD ++FV +  +G     Q   F +K+           +  
Sbjct: 194  HKQEESLFEEMLQVSQAIDPDNIIFVMDGTIGQACESQARAFKEKVD----------VAS 243

Query: 1826 ILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 1981
            +++TK D    K G ALS V  + SP++F+G G+   +++    K  V  LL
Sbjct: 244  VIVTKLDG-HAKGGGALSAVAATRSPIIFIGTGEHIDEMEPFKTKPFVSKLL 294

---

>P21565:SRP54_SCHPO Signal recognition particle 54 kDa protein homolog -|
            Schizosaccharomyces pombe (Fission yeast)
          Length = 522

 Score =  112 bits (281), Expect = 5e-24
 Identities = 81/319 (25%), Positives = 153/319 (47%), Gaps = 5/319 (1%)
 Frame = +2

Query: 1040 AEAGQKKKGWFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAAS 1219
            A+ G++         K+ + N  L  + L+    AL +  +   + +E+   + + +  S
Sbjct: 4    ADLGRRLNSALGDFSKATSVNEELVDTLLKNICTALLETDVNVRLVQELRSNIKKKINVS 63

Query: 1220 -----LEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXX 1384
                 + GK++         VQ A+ + L  ++ P+  +D         ++G+P      
Sbjct: 64   TLPQGINGKRI---------VQKAVFDELCSLVDPK--VDAF-----TPKKGRPSVIMMV 107

Query: 1385 XXXXXXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKD 1564
                  K+T  +K+A    +  L   + A DTFR+GA +QL+ +A + ++P F    E D
Sbjct: 108  GLQGSGKTTTCSKLALHYQRRGLKSCLVAADTFRAGAFDQLKQNAIKARVPYFGSYTETD 167

Query: 1565 PAVVAKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGN 1744
            P V+AKE + +   ++ DV++VDT+GR Q  + L   + ++ +  +PD  + + +A +G 
Sbjct: 168  PVVIAKEGVDKFKNDRFDVIIVDTSGRHQQEQELFAEMVEISDAIRPDQTIMILDASIGQ 227

Query: 1745 DAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCG 1924
             A  Q   F ++ AD   V         ++TK D    K G ALS V  + +P++F+G G
Sbjct: 228  AAESQSKAF-KETADFGAV---------IITKLDG-HAKGGGALSAVAATKTPIVFIGTG 276

Query: 1925 QSYTDLKKLNVKSIVKTLL 1981
            +   DL++ + +S +  LL
Sbjct: 277  EHINDLERFSPRSFISKLL 295

---

>P37105:SRP54_BACSU Signal recognition particle protein - Bacillus subtilis|
          Length = 446

 Score =  111 bits (277), Expect = 1e-23
 Identities = 74/298 (24%), Positives = 143/298 (47%), Gaps = 1/298 (0%)
 Frame = +2

Query: 1091 IAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQ 1270
            I G   + + D++  ++ ++  L+  +V  ++ +   + V+    G+ +         V 
Sbjct: 17   IRGKGKVSEQDVKEMMREVRLALLEADVNFKVVKDFVKKVSERAVGQDVMKSLTPGQQVI 76

Query: 1271 TAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYWLLQ-H 1447
              ++E L  ++    S       + A  +  P            K+T   K+A  L + H
Sbjct: 77   KVVQEELTELMGGEES-------KIAVAKRPPTVIMMVGLQGAGKTTTSGKLANLLRKKH 129

Query: 1448 NLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVL 1627
            N   M+ A D +R  A++QL T  ++L +P+F  G +  P  +AK+AI++A     D V+
Sbjct: 130  NRKPMLVAADIYRPAAIKQLETLGKQLDMPVFSLGDQVSPVEIAKQAIEKAKEEHYDYVI 189

Query: 1628 VDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPT 1807
            +DTAGR+  +  LM  L+ +  +  P+ +  V +++ G DAV+    FN++L        
Sbjct: 190  LDTAGRLHIDHELMDELTNVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLG------- 242

Query: 1808 ARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 1981
               + G++LTK D  D + GAALS+  ++ +P+ F G G+    L+  + + +   +L
Sbjct: 243  ---LTGVVLTKLDG-DTRGGAALSIRAVTNTPIKFAGLGEKLDALEPFHPERMASRIL 296

---

>P49966:SR542_ARATH Signal recognition particle 54 kDa protein 2 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 495

 Score =  111 bits (277), Expect = 1e-23
 Identities = 73/306 (23%), Positives = 139/306 (45%)
 Frame = +2

Query: 1064 GWFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGS 1243
            G   S  + +    ++++  L   L  +   L+  +V+  + +++  ++   +  + L +
Sbjct: 8    GRIMSAIQKMNNVTIIDEKALNDCLNEITRALLQSDVSFPLVKEMQTNIKKIVNLEDLAA 67

Query: 1244 FTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAK 1423
                   ++ A+   L ++L P +S         A ++ KP            K+T   K
Sbjct: 68   GHNKRRIIEQAIFSELCKMLDPGKSA-------FAPKKAKPRVVMFVGLQGSGKTTTCTK 120

Query: 1424 VAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEAT 1603
             AY+  +      +   DTFR+GA +QL+ +A + +IP +      DP  +A E +    
Sbjct: 121  YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVEGVDRFK 180

Query: 1604 RNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKL 1783
            +   D+++VDT+GR +    L   + ++    KPDLV+FV ++ +G  A +Q   F Q +
Sbjct: 181  KENCDLIIVDTSGRHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTAFEQARAFKQTV 240

Query: 1784 ADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKS 1963
            A          +  +++TK D    K G  LS V  + SPV+F+G G+   + +  + K 
Sbjct: 241  A----------VGAVIITKMDG-HAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKP 289

Query: 1964 IVKTLL 1981
             V  LL
Sbjct: 290  FVSRLL 295

---

>P20424:SRP54_YEAST Signal recognition particle subunit SRP54 - Saccharomyces cerevisiae|
            (Baker's yeast)
          Length = 541

 Score =  110 bits (275), Expect = 2e-23
 Identities = 77/286 (26%), Positives = 141/286 (49%), Gaps = 4/286 (1%)
 Frame = +2

Query: 1136 LKALKDRLMTKNVAEEIAEKLCESVAASL----EGKKLGSFTRISSTVQTAMEEALLRIL 1303
            LK +   L+  +V   +  KL  ++ + L      +K  +  +    +Q  + + L +++
Sbjct: 33   LKGIVTALLESDVNIALVSKLRNNIRSQLLSENRSEKSTTNAQTKKLIQKTVFDELCKLV 92

Query: 1304 TPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYWLLQHNLSVMMAACDTF 1483
            T   S     +     ++ K             K+T+  K+A +  +    V +   DTF
Sbjct: 93   TCEGS----EEKAFVPKKRKTNIIMFVGLQGSGKTTSCTKLAVYYSKRGFKVGLVCADTF 148

Query: 1484 RSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGRMQDNEP 1663
            R+GA +QL+ +A R +IP +    E DPA VA+E I +  + K D+++VDT+GR    E 
Sbjct: 149  RAGAFDQLKQNAIRARIPFYGSYTETDPAKVAEEGINKFKKEKFDIIIVDTSGRHHQEEE 208

Query: 1664 LMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKF 1843
            L + + ++ N+ KP+  + V +A +G  A +Q +K  ++ +D            I+LTK 
Sbjct: 209  LFQEMIEISNVIKPNQTIMVLDASIG-QAAEQQSKAFKESSDFG---------AIILTKM 258

Query: 1844 DTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 1981
            D    + G A+S V  + +P++F+G G+   DL+K + KS +  LL
Sbjct: 259  DG-HARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFISKLL 303

---

>O07347:SRP54_THEAQ Signal recognition particle protein - Thermus aquaticus|
          Length = 430

 Score =  109 bits (273), Expect = 4e-23
 Identities = 77/279 (27%), Positives = 131/279 (46%)
 Frame = +2

Query: 1091 IAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQ 1270
            + G   + + DL+  L+ ++  LM  +V  E+A    E V     GK++      +  + 
Sbjct: 16   LRGRGRITEEDLKATLREIRRALMDADVNLEVARDFVERVREEALGKQVLESLTPAEVIL 75

Query: 1271 TAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYWLLQHN 1450
              + EAL   L     + +L+D                      K+T  AK+A +     
Sbjct: 76   ATVYEALKEALGGEARLPVLKDRNL---------WFLVGLQGSGKTTTAAKLALYYKGKG 126

Query: 1451 LSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLV 1630
               ++ A DT R  A EQLR    ++ +P+ E    + P  + +   ++A     D++LV
Sbjct: 127  RRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRRVEEKARLEARDLILV 186

Query: 1631 DTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTA 1810
            DTAGR+Q +EPLM  L++L  +  PD VL V +A+ G +A+     F++K+         
Sbjct: 187  DTAGRLQIDEPLMGELARLKEVLGPDEVLLVLDAMTGQEALSVARAFDEKVG-------- 238

Query: 1811 RLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQ 1927
              + G++LTK D  D + GAALS  +++G P+ F G  +
Sbjct: 239  --VTGLVLTKLDG-DARGGAALSARHVTGKPIYFAGVSE 274

---

>Q8K9F7:SRP54_BUCAP Signal recognition particle protein - Buchnera aphidicola subsp.|
            Schizaphis graminum
          Length = 450

 Score =  109 bits (272), Expect = 6e-23
 Identities = 72/305 (23%), Positives = 152/305 (49%), Gaps = 2/305 (0%)
 Frame = +2

Query: 1073 SSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLG-SFT 1249
            S   + I     L + +++  ++ ++  L+  +V   + +K  ++V+    G ++  S T
Sbjct: 10   SQSLRKIINKGRLTEENIKDTIREVRKALLEADVTLSVIKKFIQNVSKKAIGHEINKSLT 69

Query: 1250 RISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVA 1429
                 ++    E +L +    ++ D+   +Q       P            K+T L K+A
Sbjct: 70   PGQEFIKIVKNELILSM--GEKNHDLNLSIQP------PAIILVVGLQGVGKTTTLVKLA 121

Query: 1430 YWLLQ-HNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATR 1606
             W+ + +   ++  + D +R+ A++QL+  + +++I  +     + P  + KEAI+ A  
Sbjct: 122  KWIKEKYKKKILTVSTDIYRAAAIKQLQILSDQVKIDFYLSDTTQTPINITKEAIEHAKL 181

Query: 1607 NKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLA 1786
               D++L+DTAGR+  N  +M  ++ + N++KP   L + ++++G DA++   KF+  L+
Sbjct: 182  KLYDLLLIDTAGRLHINTEMMNEINTIQNISKPIETLLIVDSMMGQDAINIAKKFSASLS 241

Query: 1787 DLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSI 1966
                      I GI++TK D+ D + G ALS+ +I+G P+ F+G G+    L+  + + I
Sbjct: 242  ----------ISGIVITKTDS-DARSGVALSIRHITGKPIKFIGTGEKLHQLEPFHPERI 290

Query: 1967 VKTLL 1981
               +L
Sbjct: 291  ADRIL 295

---

>Q92J55:SRP54_RICCN Signal recognition particle protein - Rickettsia conorii|
          Length = 449

 Score =  108 bits (270), Expect = 9e-23
 Identities = 76/303 (25%), Positives = 142/303 (46%)
 Frame = +2

Query: 1073 SSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTR 1252
            + +F  +  + +L ++ +  A++ ++  L+  +VA  + +     V     G+++     
Sbjct: 10   TKIFDKLVSSGILTEAQIDAAMRDIRVALLESDVALPVIKDFIAEVKQKALGQEVIKSVS 69

Query: 1253 ISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAY 1432
                +   + E ++ +L   +S     + +       P            K+T  +K+A 
Sbjct: 70   PGQMIIKIIHEEMINLLASSKS-----ETKLNLNSKPPVNFLMVGLQGSGKTTASSKLAL 124

Query: 1433 WLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNK 1612
             L   N  V++ + DT+R  A EQL   A  +QI        + P  + K AI EA  + 
Sbjct: 125  RLRNQNKKVLLVSLDTYRPAAQEQLAILANSVQINSLPIVQGEKPLDIVKRAIAEAKISA 184

Query: 1613 SDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADL 1792
             DVV+ DTAGR Q ++ +M     +  + +P   L V +++ G DAV   + FN+KLA  
Sbjct: 185  YDVVIYDTAGRTQIDKAMMEEALAIKKIVEPTETLLVIDSMTGQDAVVTASSFNEKLA-- 242

Query: 1793 STVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVK 1972
                    I G++L++ D  D K GAALS+ YI+  P+ F+  G++  DL++ + + +  
Sbjct: 243  --------ISGLILSRIDG-DSKGGAALSVKYITKKPIKFLSSGENLIDLEEFDAERLAS 293

Query: 1973 TLL 1981
             +L
Sbjct: 294  RIL 296

---

>Q4UKH4:SRP54_RICFE Signal recognition particle protein - Rickettsia felis (Rickettsia|
            azadi)
          Length = 449

 Score =  107 bits (266), Expect = 3e-22
 Identities = 76/303 (25%), Positives = 139/303 (45%)
 Frame = +2

Query: 1073 SSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTR 1252
            + +F  +  + +L ++ +  A++ ++  L+  +VA  + +     V     G+++     
Sbjct: 10   TKIFDKLVSSGILTEAQIDAAMRDIRVALLESDVALPVIKDFIAEVKQKALGQEVIKSVS 69

Query: 1253 ISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAY 1432
                +   + E ++ +L    S     + +       P            K+T  +K+A 
Sbjct: 70   PGQMIIKIIHEEMINLLASSES-----ETKLNLNSKPPVNFLMVGLQGSGKTTASSKLAL 124

Query: 1433 WLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNK 1612
             L   N  V++ + DT+R  A EQL   A  +QI        + P  + K AI EA  + 
Sbjct: 125  RLKNQNKKVLLVSLDTYRPAAQEQLAILANSVQINSLPIVQGEKPLDIVKRAIAEAKISA 184

Query: 1613 SDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADL 1792
              VV+ DTAGR Q ++ +M     +  + +P   L V +++ G DAV   N FN+KL   
Sbjct: 185  YGVVIYDTAGRTQIDKEMMEEALAIKKIVEPTETLLVIDSMTGQDAVVTANSFNEKLE-- 242

Query: 1793 STVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVK 1972
                    I G++L++ D  D K GAALS+ YI+  P+ F+  G+  TDL++ + + +  
Sbjct: 243  --------ISGLILSRIDG-DSKGGAALSVKYITKKPIKFLSSGEKLTDLEEFDAERLAS 293

Query: 1973 TLL 1981
             +L
Sbjct: 294  RIL 296

---

>P10121:FTSY_ECOLI Cell division protein ftsY - Escherichia coli|
          Length = 497

 Score =  106 bits (264), Expect = 5e-22
 Identities = 89/316 (28%), Positives = 145/316 (45%), Gaps = 9/316 (2%)
 Frame = +2

Query: 1058 KKGWFSSMFKSIAGNNVLEKSDLQPALKAL-KDRLMTKNVAEEIAEKLC-ESVAASLEGK 1231
            K+G+F+ + +S+    +  K +L     +L + + +  ++ EE+ E+L    V      K
Sbjct: 192  KEGFFARLKRSL----LKTKENLGSGFISLFRGKKIDDDLFEELEEQLLIADVGVETTRK 247

Query: 1232 KLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGK-PYXXXXXXXXXXXKS 1408
             + + T  +S  Q    EAL  +L       + +  +     GK P+           K+
Sbjct: 248  IITNLTEGASRKQLRDAEALYGLLKEEMGEILAKVDEPLNVEGKAPFVILMVGVNGVGKT 307

Query: 1409 TNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEA 1588
            T + K+A    Q   SVM+AA DTFR+ AVEQL+   +R  IP+  +    D A V  +A
Sbjct: 308  TTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDA 367

Query: 1589 IQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNK------PDLVLFVGEALVGNDA 1750
            IQ A     DV++ DTAGR+Q+   LM  L K++ + K      P  V+   +A  G +A
Sbjct: 368  IQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNA 427

Query: 1751 VDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQS 1930
            V Q   F++ +           + GI LTK D    K G   S+    G P+ ++G G+ 
Sbjct: 428  VSQAKLFHEAVG----------LTGITLTKLDG-TAKGGVIFSVADQFGIPIRYIGVGER 476

Query: 1931 YTDLKKLNVKSIVKTL 1978
              DL+       ++ L
Sbjct: 477  IEDLRPFKADDFIEAL 492

---

>Q99150:SRP54_YARLI Signal recognition particle 54 kDa protein homolog - Yarrowia|
            lipolytica (Candida lipolytica)
          Length = 536

 Score =  105 bits (263), Expect = 6e-22
 Identities = 83/316 (26%), Positives = 147/316 (46%), Gaps = 3/316 (0%)
 Frame = +2

Query: 1043 EAGQKKKGWFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASL 1222
            + G++  G F+++ K   G ++ E  D    LK +   L+  +V  ++  +L + V  S+
Sbjct: 5    DLGKRINGAFANLSK---GGDIDEALDAM--LKEVCSALLESDVNIKLVSQLRQKVKNSV 59

Query: 1223 EGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAK---ERGKPYXXXXXXXX 1393
            +    G+  +    +Q A+ + L+ ++    S        AAK   ++GK          
Sbjct: 60   KATPNGASKK--KVIQKALFDELVNLVGVDESA-----ASAAKFKPQKGKSNVVMFVGLQ 112

Query: 1394 XXXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAV 1573
               K+T+  K+A +  +    V +   DTFR+GA +QL+ +A + +IP F    E DP  
Sbjct: 113  GSGKTTSCTKLAVYYQRRGFKVGLVCADTFRAGAFDQLKQNATKAKIPFFGSYTETDPVA 172

Query: 1574 VAKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAV 1753
            VA E + +  + K ++++VDT+GR +    L   +  +    KPD  + V +A +G  A 
Sbjct: 173  VAAEGVAKFKKEKFEIIIVDTSGRHRQESELFTEMVDIGAAVKPDSTIMVLDASIGQAAE 232

Query: 1754 DQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSY 1933
             Q   F            A     I+LTK D    K G A+S V  + +P++F+G G+  
Sbjct: 233  PQSRAFKD----------ASDFGSIILTKMDG-HAKGGGAISAVAATNTPIIFIGTGEHI 281

Query: 1934 TDLKKLNVKSIVKTLL 1981
             DL+  + K  +  LL
Sbjct: 282  HDLEAFSPKQFISKLL 297

---

>Q1RHD6:SRP54_RICBR Signal recognition particle protein - Rickettsia bellii (strain|
            RML369-C)
          Length = 449

 Score =  105 bits (263), Expect = 6e-22
 Identities = 75/301 (24%), Positives = 138/301 (45%)
 Frame = +2

Query: 1079 MFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRIS 1258
            +F  +  + +L +  +  AL+ ++  L+  +VA  + +     V     G+++       
Sbjct: 12   IFDRLVSSGLLTEEQIDAALRDIRVALLESDVALPVIKNFVAEVKQKALGQEVIKSVSPG 71

Query: 1259 STVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYWL 1438
              +   + E ++ IL+         +++       P            K+T   K+A  L
Sbjct: 72   QMIIKIIHEEMINILSSSED-----EIKLNLNAKPPVNLLMVGLQGSGKTTASGKLALCL 126

Query: 1439 LQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSD 1618
               N  V++ + DT+R  A EQL   A  ++I        + P  + K A+ EA  +  D
Sbjct: 127  KNQNKKVLLVSLDTYRPAAQEQLEILANSVKINSLPIVKGEKPLDIVKRAMAEAKLSAYD 186

Query: 1619 VVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLST 1798
            +V+ DTAGR Q ++ +M     +  + +P   L V +++ G DAV   + FN++L     
Sbjct: 187  IVIYDTAGRTQIDQEMMNEAIAIKKIVEPTETLLVIDSMTGQDAVVTASSFNEQLE---- 242

Query: 1799 VPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTL 1978
                  I G++L++ D  D K GAALS+ YI+  P+ F+  G+  TDL++ + K I   +
Sbjct: 243  ------ISGLILSRIDG-DSKGGAALSVKYITQRPIKFLSSGEKLTDLEEFDAKRIASRI 295

Query: 1979 L 1981
            L
Sbjct: 296  L 296

---

>P44518:SRP54_HAEIN Signal recognition particle protein - Haemophilus influenzae|
          Length = 462

 Score =  105 bits (261), Expect = 1e-21
 Identities = 80/314 (25%), Positives = 147/314 (46%), Gaps = 11/314 (3%)
 Frame = +2

Query: 1073 SSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVA----EEIAEKLCESVAASLEGKKLG 1240
            S   ++I G   L + +++  L+ ++  L+  +VA     E   K+ ES       K L 
Sbjct: 10   SKTLRNITGKGRLTEDNIKETLREVRMALLEADVALPVVREFIAKVKESALGEEVNKSLT 69

Query: 1241 SFTRISSTVQTAMEEAL------LRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXX 1402
                    VQ  +E+A+      L + T   ++ ++  +Q A                  
Sbjct: 70   PGQEFLKIVQRELEKAMGEANESLNLATQPPAVILMAGLQGA-----------------G 112

Query: 1403 KSTNLAKVAYWLLQ-HNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVA 1579
            K+T++ K+A +L + H   V++ + D +R  A++QL T A+ + +  F    +++P  +A
Sbjct: 113  KTTSVGKLAKFLRERHKKKVLVVSADVYRPAAIKQLETLAQSVGVDFFPSDVKQNPVDIA 172

Query: 1580 KEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQ 1759
            K A+ +A     DV++VDTAGR+  +  +M  + ++     P   LF  +A+ G DA + 
Sbjct: 173  KSALADAKLKFYDVLIVDTAGRLHVDTEMMDEIKQVHAALNPIETLFTVDAMTGQDAANT 232

Query: 1760 LNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTD 1939
               FN+ L           + G++LTK D  D + GAALS+  I+G P+ F+G G+    
Sbjct: 233  AKAFNEALP----------LTGVILTKVDG-DARGGAALSIRQITGKPIKFLGVGEKTEA 281

Query: 1940 LKKLNVKSIVKTLL 1981
            L+  +   +   +L
Sbjct: 282  LEPFHPDRVASRIL 295

---

>Q89AE4:SRP54_BUCBP Signal recognition particle protein - Buchnera aphidicola subsp.|
            Baizongia pistaciae
          Length = 450

 Score =  103 bits (258), Expect = 2e-21
 Identities = 71/306 (23%), Positives = 145/306 (47%), Gaps = 2/306 (0%)
 Frame = +2

Query: 1070 FSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLG-SF 1246
            F  + K I+    L + +++  L+ ++  L+  +VA  + +    S+  S+ G ++  S 
Sbjct: 9    FLKIIKKISNKGRLTEKNIKETLREIRIALLEADVALPVVKNFIPSIQKSVIGNQVNKSL 68

Query: 1247 TRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKV 1426
            T     ++   +E  L +     S+++            P            K+T  AK+
Sbjct: 69   TPGQELIKIVKKELTLILGKENHSLNL--------SVTPPAIILMIGLQGSGKTTTTAKL 120

Query: 1427 AYWL-LQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEAT 1603
               +  ++   V++ + D +R  A++QL+  +++ +I  F     + P  + + AIQ A 
Sbjct: 121  GQLIRTKYKKKVIVTSIDIYRLAAIKQLKMLSKQAKISFFPSNNTQSPKDIVQHAIQHAK 180

Query: 1604 RNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKL 1783
                DV+L+DTAGR+Q ++ +M  L  + N++ P    FV +A+ G D+++ +N+FN+ L
Sbjct: 181  LKFYDVLLIDTAGRLQIDKKMMNELLDVYNISHPIETFFVADAMFGQDSINVINEFNKYL 240

Query: 1784 ADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKS 1963
                       +   ++TK D+ D + G  LS+ Y++  P+ F+G G+   +L+      
Sbjct: 241  P----------VSSFIITKTDS-DTRAGIILSIKYLTKKPIKFIGTGEKLEELELFYPDR 289

Query: 1964 IVKTLL 1981
            I   +L
Sbjct: 290  IASRIL 295

---

>P44870:FTSY_HAEIN Cell division protein ftsY homolog - Haemophilus influenzae|
          Length = 414

 Score =  103 bits (257), Expect = 3e-21
 Identities = 74/284 (26%), Positives = 129/284 (45%), Gaps = 6/284 (2%)
 Frame = +2

Query: 1145 LKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQTAMEEALLRILTPRRSID 1324
            L+++L+  ++      K+ +++      K+L     +   ++  M + L  +  P     
Sbjct: 146  LEEQLLIADIGVPTTSKIIKNLTEHASRKELQDAELLYQQLKVEMADILEPVAQPL---- 201

Query: 1325 ILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQ 1504
               ++ + K   KPY           K+T + K+A        SVM+AA DTFR+ AVEQ
Sbjct: 202  ---EIDSTK---KPYVILMVGVNGVGKTTTIGKLARKFQAEGKSVMLAAGDTFRAAAVEQ 255

Query: 1505 LRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSK 1684
            L+    R  IP+  +    D A V  +A+Q A     D+++ DTAGR+Q+   LM  L K
Sbjct: 256  LQVWGERNHIPVVAQSTGSDSASVIFDAMQSAAARNIDILIADTAGRLQNKNNLMDELKK 315

Query: 1685 LINLNK------PDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFD 1846
            ++ + K      P  ++   +A  G +A+ Q   FN+ +           + GI LTK D
Sbjct: 316  IVRVMKKYDETAPHEIMLTLDAGTGQNAISQAKLFNEAVG----------LTGISLTKLD 365

Query: 1847 TIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTL 1978
                K G   ++      P+ ++G G+   DL++ N K  ++ L
Sbjct: 366  G-TAKGGVIFAIADQFKLPIRYIGVGEKIEDLREFNAKEFIEAL 408

---

>Q68XJ4:SRP54_RICTY Signal recognition particle protein - Rickettsia typhi|
          Length = 449

 Score =  103 bits (256), Expect = 4e-21
 Identities = 75/303 (24%), Positives = 134/303 (44%)
 Frame = +2

Query: 1073 SSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTR 1252
            + +F  +  + +L ++ +  A++ ++  L+  +VA  + +     V     G+++     
Sbjct: 10   TKIFDRLVNSGILTENQIDTAMRDVRVALLESDVALPVIKGFIAEVKQKALGQEVIKSVS 69

Query: 1253 ISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAY 1432
                +   + E ++ +L    S   L           P            K+T   K+A 
Sbjct: 70   PGQMIIKIIHEEMINLLASSESTTKLN-----LNSKPPVNLLMVGLQGGGKTTASGKLAL 124

Query: 1433 WLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNK 1612
             L   N  V++ + DT+R  A EQL   A  + I        + P  + K AI EA    
Sbjct: 125  LLKNQNKKVLLVSLDTYRPAAQEQLAIIANSVNIDSLPIVQGEQPLDIVKRAISEAKIFA 184

Query: 1613 SDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADL 1792
             DVV+ DTAGR+Q +  +M     +  +  P   L V +++ G DAV     F+ KL   
Sbjct: 185  YDVVIYDTAGRIQIDNVMMEEALAIKKILNPTETLLVIDSMTGQDAVVTARSFSDKLE-- 242

Query: 1793 STVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVK 1972
                    I G++L++ D  D K GAALS+ Y++  P+ F+ CG+  TDL++ + + +  
Sbjct: 243  --------ISGLILSRIDG-DTKGGAALSVKYLTQKPIKFLSCGEKLTDLEEFDAERLAS 293

Query: 1973 TLL 1981
             +L
Sbjct: 294  RIL 296

---

>Q9ZDZ0:SRP54_RICPR Signal recognition particle protein - Rickettsia prowazekii|
          Length = 449

 Score =  103 bits (256), Expect = 4e-21
 Identities = 76/303 (25%), Positives = 135/303 (44%)
 Frame = +2

Query: 1073 SSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTR 1252
            + +F  +  + +L ++ +  A++ ++  L+  +VA  + +   E V     G+++     
Sbjct: 10   TKIFDKLVNSGILTENQIDTAMRDVRVALLESDVALPVIKGFIEEVKQKALGQEVIKSVS 69

Query: 1253 ISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAY 1432
                +   + E ++ +L    S   L           P            K+T   K+A 
Sbjct: 70   PGQMIIKIIHEEMINLLASTESTTKLN-----LNAKPPVNLLIVGLQGGGKTTASGKLAL 124

Query: 1433 WLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNK 1612
             L   N  V++ + DT+R  A EQL   A  + I        + P  + K AI EA  + 
Sbjct: 125  RLKNQNKKVLLVSLDTYRPAAQEQLAIIANSVNIDSLPIVKGEKPLDIVKRAIGEAQISA 184

Query: 1613 SDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADL 1792
             DVV+ DTAGR+Q +  +M     +  +  P   L V +++ G DAV     F++KL   
Sbjct: 185  YDVVIYDTAGRIQIDNVMMEEALAIKKILNPTETLLVIDSMTGQDAVITAKTFSEKLE-- 242

Query: 1793 STVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVK 1972
                    I G++L++ D  D K GAALS+ Y +  P+ F+  G+  TDL++ N + +  
Sbjct: 243  --------ISGLILSRIDG-DTKGGAALSVKYFTQKPIKFLSSGEKLTDLEEFNAERLAS 293

Query: 1973 TLL 1981
             +L
Sbjct: 294  RIL 296

---

>Q8ZT95:SRP54_PYRAE Signal recognition 54 kDa protein - Pyrobaculum aerophilum|
          Length = 433

 Score =  102 bits (253), Expect = 9e-21
 Identities = 77/326 (23%), Positives = 148/326 (45%)
 Frame = +2

Query: 1070 FSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFT 1249
            F  + + I G + ++++ LQ   + ++  L+  +V  ++ +   E+    ++ +K  +  
Sbjct: 8    FGKLLEKIRGVDYIDEATLQELSREIQRTLLKADVPLDLVKSFTENAVKRIKEEKPPAGI 67

Query: 1250 RISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVA 1429
                 +   + E L+++L   +  +        K   KPY           K+T  AK+A
Sbjct: 68   PPREYLIYVLYEELVKLLGGEQPAEF-------KPTKKPYIVLLLGVEGSGKTTTAAKLA 120

Query: 1430 YWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRN 1609
             +L +    V +   DT R  A +QLR  A ++ +P + +   KD   +AK  +Q     
Sbjct: 121  KYLAKRGYKVGLVETDTIRPAAFDQLRQLAEKIGVPFYGERDGKDAVEIAKRGVQNF--K 178

Query: 1610 KSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLAD 1789
              DV++VDTAGR ++ E L++ +  + +   PD V+ V +A VG  A  Q   F + L  
Sbjct: 179  NMDVIIVDTAGRHRNEEALLKEVRAIYDAVSPDEVVLVIDATVGKMAAAQAEAFMKYLP- 237

Query: 1790 LSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIV 1969
                     I  +++TK D+   + G AL+ V  +G+ V F+G G+   + ++ + +  V
Sbjct: 238  ---------IHSVIITKMDS-TARGGGALAAVAKTGAKVKFIGVGEDVDEFEQFSPRKFV 287

Query: 1970 KTLLK*NGSSTCRAPICAAYQRVSVI 2047
              +L      T    I A ++   V+
Sbjct: 288  ARVLGMGDLDTLLEKIKAVFEEEEVL 313

---

>Q8U070:SRP54_PYRFU Signal recognition 54 kDa protein - Pyrococcus furiosus|
          Length = 443

 Score =  101 bits (252), Expect = 1e-20
 Identities = 78/304 (25%), Positives = 141/304 (46%), Gaps = 1/304 (0%)
 Frame = +2

Query: 1073 SSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAA-SLEGKKLGSFT 1249
            ++  K IA  + ++++ ++  ++ ++  L+  +V   +  +L   +   +LE K     +
Sbjct: 11   ANTLKKIARASSVDEALIKELVRDIQRALIQADVNVRLVLQLTREIQRRALEEKPPAGIS 70

Query: 1250 RISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVA 1429
            +    ++   EE    + T  + I+I         + KP            K+T +AK+A
Sbjct: 71   KKEHIIKIVYEELTKFLGTEAKPIEI---------KEKPTILLMVGIQGSGKTTTVAKLA 121

Query: 1430 YWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRN 1609
             +  +    V +   DT+R GA  QLR    R  I +F    EKD   +AKE +      
Sbjct: 122  RYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRYHIEVFGNPQEKDAIKLAKEGVDYFKSK 181

Query: 1610 KSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLAD 1789
              D+++VDTAGR ++++ L+  + ++ N+  P  V+ V +  +G  A      +NQ LA 
Sbjct: 182  GVDIIIVDTAGRHKEDKALIEEMKQISNVIHPHEVILVIDGTIGQQA------YNQALAF 235

Query: 1790 LSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIV 1969
                P    I  I++TK D    K G ALS V  +G+P+ F+G G+   D++  +    V
Sbjct: 236  KEATP----IGSIIVTKLDG-SAKGGGALSAVAATGAPIKFIGTGEKIDDIEPFDPPRFV 290

Query: 1970 KTLL 1981
              LL
Sbjct: 291  SRLL 294

---

>Q5JJC8:SRP54_PYRKO Signal recognition 54 kDa protein - Pyrococcus kodakaraensis|
            (Thermococcus kodakaraensis)
          Length = 448

 Score =  100 bits (250), Expect = 2e-20
 Identities = 76/304 (25%), Positives = 145/304 (47%), Gaps = 1/304 (0%)
 Frame = +2

Query: 1073 SSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAA-SLEGKKLGSFT 1249
            +S  K +A ++ ++++ ++  ++ ++  L+  +V  ++  +L + +   +LE +     +
Sbjct: 11   NSALKKLARSSTVDEATIKEIVRDIQRALLQADVNVKLVLQLTKQIQKRALEEEPPAGVS 70

Query: 1250 RISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVA 1429
            +    ++   EE    + T  + ++I         + KP            K+T++AK+A
Sbjct: 71   KKEHIIKIVYEELTKFLGTEAKPLEI---------KHKPTVILTVGIQGSGKTTSVAKLA 121

Query: 1430 YWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRN 1609
             +L +    V +   DT+R GA  QLR       I +F    EKD   +A+E ++     
Sbjct: 122  RYLQKRGYKVGVVCSDTWRPGAYYQLRQLLDPFGIEVFGDPEEKDAVKLAREGVEHFREK 181

Query: 1610 KSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLAD 1789
              DV++VD+AGR ++ + L+  + ++    KP  V+ V +  +G  A      +NQ +A 
Sbjct: 182  GVDVIIVDSAGRHKEEKGLIEEMRQISEAIKPHEVILVIDGTIGQQA------YNQAMAF 235

Query: 1790 LSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIV 1969
                P    I  I++TK D    K G ALS V  +G+P+ F+G G+   DL+  + K  V
Sbjct: 236  KEATP----IGSIIVTKLDG-SAKGGGALSAVAATGAPIKFIGTGERIDDLEPFDPKRFV 290

Query: 1970 KTLL 1981
              LL
Sbjct: 291  SRLL 294

---

>Q00179:SRP54_ASPNG Signal recognition particle 54 kDa protein homolog - Aspergillus|
            niger
          Length = 534

 Score =  100 bits (250), Expect = 2e-20
 Identities = 69/294 (23%), Positives = 137/294 (46%)
 Frame = +2

Query: 1100 NNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQTAM 1279
            NN+ EK      +K +   L++ +V   + + L +S+ +S+    L         +Q A+
Sbjct: 21   NNLDEKQAFDDMIKEICAALLSADVNVRLVQSLRKSIKSSVNFASLPPAVNKKRLIQKAV 80

Query: 1280 EEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYWLLQHNLSV 1459
             + L+ ++ P              ++G+             K+T   K+A          
Sbjct: 81   FDELVSLVDPHAE-------PFRPKKGRSNVIMFVGLQGAGKTTTCTKLARHYQMRGFKT 133

Query: 1460 MMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTA 1639
             +   DTFR+GA +QL+ +A + +IP +    + DPA+VA E + +  + + ++++VDT+
Sbjct: 134  ALVCADTFRAGAFDQLKQNATKAKIPYYGSLTQTDPAIVAAEGVAKFKKERFEIIIVDTS 193

Query: 1640 GRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLI 1819
            GR +  E L   ++++     PD  + V ++ +G  A  Q + F +  AD          
Sbjct: 194  GRHKQEEELFTEMTQIQTAVTPDQTILVLDSTIGQAAEAQSSAF-KATADFG-------- 244

Query: 1820 DGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 1981
              I++TK D      G A+S V  + +P++++G G+   DL++   K+ ++ LL
Sbjct: 245  -AIIITKTDG-HAAGGGAISAVAATHTPIIYLGTGEHLMDLERFEPKAFIQKLL 296

---

>P57137:FTSY_BUCAI Cell division protein ftsY homolog - Buchnera aphidicola subsp.|
            Acyrthosiphon pisum (Acyrthosiphon pisum symbiotic
            bacterium)
          Length = 378

 Score =  100 bits (249), Expect = 3e-20
 Identities = 80/304 (26%), Positives = 142/304 (46%), Gaps = 16/304 (5%)
 Frame = +2

Query: 1115 KSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTR---ISSTVQTAMEE 1285
            K  L+   K L D++    ++++I E L E +   +    +G  T    IS+ ++    E
Sbjct: 84   KKSLKTTKKNLGDKIYQIFLSKKIDEVLFEELEEKMLLADIGINTTNRIISNLIKDVNRE 143

Query: 1286 AL-----LRILTPRRSIDILRDVQAAKERGK--PYXXXXXXXXXXXKSTNLAKVAYWLLQ 1444
             L     L  L  R+  +IL+ V+   E     P+           K+T +AK+A     
Sbjct: 144  DLKNSEKLYFLLKRKMFNILKKVEIPLEISSHSPFVILVVGVNGTGKTTTVAKLAEKYKL 203

Query: 1445 HNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVV 1624
               S+M+AA DTFR+  +EQL+T  +   IP+  +    DPA V  +A++ A   K DV+
Sbjct: 204  EGKSIMLAAADTFRAAGIEQLQTLGKLNNIPVIAQRSGSDPAAVIFDAVKSAKSKKIDVL 263

Query: 1625 LVDTAGRMQDNEPLMRALSKL------INLNKPDLVLFVGEALVGNDAVDQLNKFNQKLA 1786
            ++DTAGR+ +   L+  L K+      I+++ P   L + ++  G + + Q   F++ L 
Sbjct: 264  IIDTAGRLHNKLHLIEELKKIVRVIKKIDISAPHEKLLIIDSCNGQNTIQQTEIFHKALN 323

Query: 1787 DLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSI 1966
                      + GI++TK D    K G   S+      P+ ++G G+   DL   N +  
Sbjct: 324  ----------LTGIIITKLDG-TAKGGVVFSLADQFQIPIRYIGIGEKMQDLGHFNSQEF 372

Query: 1967 VKTL 1978
            ++++
Sbjct: 373  IESI 376

---

>Q9V1E8:SRP54_PYRAB Signal recognition 54 kDa protein - Pyrococcus abyssi|
          Length = 443

 Score =  100 bits (248), Expect = 3e-20
 Identities = 80/304 (26%), Positives = 139/304 (45%), Gaps = 1/304 (0%)
 Frame = +2

Query: 1073 SSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAA-SLEGKKLGSFT 1249
            S+  K IA    ++++ ++  ++ ++  L+  +V   +  KL + +   +LE K     +
Sbjct: 11   SNALKKIARAGSVDEALVKEVVRDIQRALIQADVNVRLVLKLTKEIQRRALEEKPPAGIS 70

Query: 1250 RISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVA 1429
            +    ++   EE    + T  + I+I         + KP            K+T +AK+A
Sbjct: 71   KKEHIIKIVYEELTKFLGTEAKPIEI---------KEKPTILLMVGVQGSGKTTTVAKLA 121

Query: 1430 YWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRN 1609
                +    V +   DT+R GA  QL+       I +F    EKD   +AKE ++     
Sbjct: 122  RHFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPNEKDAIKLAKEGVEHFKAK 181

Query: 1610 KSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLAD 1789
              D+++VDTAGR ++ + L+  +  + N  KP  V+ V +  +G  A      +NQ LA 
Sbjct: 182  GVDLIIVDTAGRHKEEKDLIEEMRMISNEIKPHEVILVIDGTIGQQA------YNQALAF 235

Query: 1790 LSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIV 1969
                P    I  I++TK D+   K G ALS V  +G+P+ F+G G+   DL+  +    V
Sbjct: 236  KEATP----IGSIIVTKLDS-SAKGGGALSAVAATGAPIKFIGTGEKIDDLEPFDPARFV 290

Query: 1970 KTLL 1981
              LL
Sbjct: 291  SRLL 294

---

>Q8TUY9:SRP54_METKA Signal recognition 54 kDa protein - Methanopyrus kandleri|
          Length = 447

 Score =  100 bits (248), Expect = 3e-20
 Identities = 87/304 (28%), Positives = 148/304 (48%), Gaps = 5/304 (1%)
 Frame = +2

Query: 1085 KSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAA-SLEGKKLGSFTRISS 1261
            K I G +++++  ++  ++ ++  L+  +V  ++  +L + +   +LE +      +   
Sbjct: 13   KKIKGASIIDEDFVKEVVRDVQRALLEADVDVKLVLELSKRIEKRALEEEPPAGVPKRDY 72

Query: 1262 TVQTAMEEALLRIL----TPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVA 1429
             ++   EE L+ +L    T    ID+ RDV      G              K+T  AK+A
Sbjct: 73   LLRIVYEE-LVELLGGEKTEGLDIDLSRDVNVIMLVG---------LYGMGKTTTAAKLA 122

Query: 1430 YWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRN 1609
             +L +    V +   D +R  A EQLR  A  + +P+  +  + D AV       EA ++
Sbjct: 123  RYLQRKGYRVGLVGADPYRPAAGEQLRQLAEEVDVPVHVE--DVDDAVEMAVKGVEALKD 180

Query: 1610 KSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLAD 1789
            + DVV+VDTAGR + +E L+  L ++    +P  VL V +A VG  A D    F++    
Sbjct: 181  ECDVVIVDTAGRDRLSEDLIDELREMAERIEPHEVLLVLDATVGQKAGDHAEAFHE---- 236

Query: 1790 LSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIV 1969
                  A  + G+++TK DT   K G ALS V  +G+P+ FVG G+   DL++ N +S V
Sbjct: 237  ------AVQLTGVVITKLDTA-AKGGGALSAVARTGAPIKFVGTGERVDDLEEFNPRSFV 289

Query: 1970 KTLL 1981
              LL
Sbjct: 290  ARLL 293

---

>P0AGD7:SRP54_ECOLI Signal recognition particle protein - Escherichia coli|
          Length = 453

 Score =  100 bits (248), Expect = 3e-20
 Identities = 75/305 (24%), Positives = 142/305 (46%), Gaps = 2/305 (0%)
 Frame = +2

Query: 1073 SSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLG-SFT 1249
            S   ++I+G   L + +++  L+ ++  L+  +VA  +  +    V     G ++  S T
Sbjct: 10   SRTLRNISGRGRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKAVGHEVNKSLT 69

Query: 1250 RISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVA 1429
                 V+    E +  +    +++++            P            K+T++ K+ 
Sbjct: 70   PGQEFVKIVRNELVAAMGEENQTLNLAAQ--------PPAVVLMAGLQGAGKTTSVGKLG 121

Query: 1430 YWLLQ-HNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATR 1606
             +L + H   V++ + D +R  A++QL T A ++ +  F     + P  +   A++EA  
Sbjct: 122  KFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAKL 181

Query: 1607 NKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLA 1786
               DV+LVDTAGR+  +E +M  + ++     P   LFV +A+ G DA +    FN+ L 
Sbjct: 182  KFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEALP 241

Query: 1787 DLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSI 1966
                      + G++LTK D  D + GAALS+ +I+G P+ F+G G+    L+  +   I
Sbjct: 242  ----------LTGVVLTKVDG-DARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRI 290

Query: 1967 VKTLL 1981
               +L
Sbjct: 291  ASRIL 295

---

>P0AGD8:SRP54_ECOL6 Signal recognition particle protein - Escherichia coli O6|
          Length = 453

 Score =  100 bits (248), Expect = 3e-20
 Identities = 75/305 (24%), Positives = 142/305 (46%), Gaps = 2/305 (0%)
 Frame = +2

Query: 1073 SSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLG-SFT 1249
            S   ++I+G   L + +++  L+ ++  L+  +VA  +  +    V     G ++  S T
Sbjct: 10   SRTLRNISGRGRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKAVGHEVNKSLT 69

Query: 1250 RISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVA 1429
                 V+    E +  +    +++++            P            K+T++ K+ 
Sbjct: 70   PGQEFVKIVRNELVAAMGEENQTLNLAAQ--------PPAVVLMAGLQGAGKTTSVGKLG 121

Query: 1430 YWLLQ-HNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATR 1606
             +L + H   V++ + D +R  A++QL T A ++ +  F     + P  +   A++EA  
Sbjct: 122  KFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAKL 181

Query: 1607 NKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLA 1786
               DV+LVDTAGR+  +E +M  + ++     P   LFV +A+ G DA +    FN+ L 
Sbjct: 182  KFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEALP 241

Query: 1787 DLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSI 1966
                      + G++LTK D  D + GAALS+ +I+G P+ F+G G+    L+  +   I
Sbjct: 242  ----------LTGVVLTKVDG-DARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRI 290

Query: 1967 VKTLL 1981
               +L
Sbjct: 291  ASRIL 295

---

>P0AGD9:SRP54_ECO57 Signal recognition particle protein - Escherichia coli O157:H7|
          Length = 453

 Score =  100 bits (248), Expect = 3e-20
 Identities = 75/305 (24%), Positives = 142/305 (46%), Gaps = 2/305 (0%)
 Frame = +2

Query: 1073 SSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLG-SFT 1249
            S   ++I+G   L + +++  L+ ++  L+  +VA  +  +    V     G ++  S T
Sbjct: 10   SRTLRNISGRGRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKAVGHEVNKSLT 69

Query: 1250 RISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVA 1429
                 V+    E +  +    +++++            P            K+T++ K+ 
Sbjct: 70   PGQEFVKIVRNELVAAMGEENQTLNLAAQ--------PPAVVLMAGLQGAGKTTSVGKLG 121

Query: 1430 YWLLQ-HNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATR 1606
             +L + H   V++ + D +R  A++QL T A ++ +  F     + P  +   A++EA  
Sbjct: 122  KFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAKL 181

Query: 1607 NKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLA 1786
               DV+LVDTAGR+  +E +M  + ++     P   LFV +A+ G DA +    FN+ L 
Sbjct: 182  KFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEALP 241

Query: 1787 DLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSI 1966
                      + G++LTK D  D + GAALS+ +I+G P+ F+G G+    L+  +   I
Sbjct: 242  ----------LTGVVLTKVDG-DARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRI 290

Query: 1967 VKTLL 1981
               +L
Sbjct: 291  ASRIL 295

---

>Q1RKK5:FTSY_RICBR Cell division protein ftsY homolog - Rickettsia bellii (strain|
            RML369-C)
          Length = 303

 Score =  100 bits (248), Expect = 3e-20
 Identities = 83/316 (26%), Positives = 141/316 (44%), Gaps = 8/316 (2%)
 Frame = +2

Query: 1058 KKGWFSSMFKSIAG-NNVLEKSDLQP-ALKALKDRLMTKNVAEEIAEKLCESVAASLEGK 1231
            K+G   +  K  AG + +  K  L    L+ L++ L++ ++   +A K+ E    SL+  
Sbjct: 9    KQGLSKTSGKISAGIDKIFYKKKLDAETLEELEELLISTDMGSLVAAKIIEDFK-SLKFD 67

Query: 1232 KLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKST 1411
            K    T I  T+   +E+ LL             ++       K             K+T
Sbjct: 68   KEVETTEIKETLANLIEQQLLE-----------SEIPFTLNENKLNVVLVCGVNGAGKTT 116

Query: 1412 NLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAI 1591
             + K+A         V +AACDTFR+ AV QL +   R +  +       DPA VA  A+
Sbjct: 117  TIGKLAAMYGMQGKKVAVAACDTFRAAAVNQLDSWVTRAKALLITGEEAADPASVAYRAV 176

Query: 1592 QEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINL------NKPDLVLFVGEALVGNDAV 1753
            +E+ +   D++ +DTAGR+ + + LM  L+K++ +      N P   + V +A+ G +  
Sbjct: 177  EESIKQDIDILFIDTAGRLHNKKNLMDELTKIVKVIKKVDENLPTHSVLVIDAITGQNTY 236

Query: 1754 DQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSY 1933
            +Q+  FN           A  + G+++TK D    K G  + +V     P+ F+G G+  
Sbjct: 237  NQVEHFND----------ATNLTGLIVTKLDG-SAKAGVIVGVVQRFNLPIYFIGIGEQI 285

Query: 1934 TDLKKLNVKSIVKTLL 1981
             DLK  N     K+L+
Sbjct: 286  EDLKIFNRHDFAKSLV 301

---

>P70722:SRP54_ACIAM Signal recognition 54 kDa protein - Acidianus ambivalens|
            (Desulfurolobus ambivalens)
          Length = 451

 Score = 99.8 bits (247), Expect = 4e-20
 Identities = 73/301 (24%), Positives = 139/301 (46%), Gaps = 2/301 (0%)
 Frame = +2

Query: 1085 KSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISST 1264
            K + G++  +K+ ++  +K L+  L++ +V  ++   L   +   L+ +K  ++      
Sbjct: 13   KFLTGSSSYDKA-VEDFIKELQKSLISADVNVKLVFSLTNKIKERLKNEKPPTYIERREW 71

Query: 1265 VQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYWLLQ 1444
                + + L  +    +   ++ D         PY           K+T   K+AY+  +
Sbjct: 72   FIKIVYDELSNLFGGDKEPKVIPDKI-------PYVIMLVGVQGTGKTTTAGKLAYFYKK 124

Query: 1445 HNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVV 1624
                V +   D +R  A+EQL+   +++ +P++ +  EKD   +AK  +++    K +++
Sbjct: 125  KGFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPGEKDAVGIAKRGVEKFLSEKMEII 184

Query: 1625 LVDTAGR--MQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLST 1798
            +VDTAGR    +   L+  +  +    KPD V  V +A +G  A D  +KFNQ       
Sbjct: 185  IVDTAGRHGYGEEAALLEEMKNIYEAIKPDEVTLVIDASIGQKAYDLASKFNQ------- 237

Query: 1799 VPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTL 1978
               A  I  I++TK D    K G ALS V  +G+ + F+G G+   +L+  N +  V  +
Sbjct: 238  ---ASKIGTIIITKMDG-TAKGGGALSAVAATGATIKFIGTGEKIDELEVFNPRRFVARI 293

Query: 1979 L 1981
            L
Sbjct: 294  L 294

---

>O67066:FTSY_AQUAE Cell division protein ftsY homolog - Aquifex aeolicus|
          Length = 461

 Score = 99.8 bits (247), Expect = 4e-20
 Identities = 65/200 (32%), Positives = 102/200 (51%), Gaps = 6/200 (3%)
 Frame = +2

Query: 1403 KSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAK 1582
            K+T + K+A+ L Q    V++ A DTFR+ A+EQL   A+R  + I +K    DP  V  
Sbjct: 273  KTTTIGKLAHQLKQKGKKVLLVAGDTFRAAAIEQLEVWAKRAGVDIVKKEEGSDPGAVVY 332

Query: 1583 EAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKL------INLNKPDLVLFVGEALVGN 1744
            E +++A     +VVLVDTAGR+   EPL+  L K+       +  +P   L V +A  G 
Sbjct: 333  EGMKKAKEEGYEVVLVDTAGRLHTKEPLINELRKIKKVIQKFDKEEPSETLLVIDATTGQ 392

Query: 1745 DAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCG 1924
            +A+ Q   F + +           I GI++TK D    K GA +++      P+  VG G
Sbjct: 393  NAIQQAKVFKEAVD----------ITGIVVTKLDG-SAKGGAVVAICRELKIPIKLVGVG 441

Query: 1925 QSYTDLKKLNVKSIVKTLLK 1984
            +   DL+  +  + V+ LL+
Sbjct: 442  EGIDDLQPFDADAYVEALLE 461

---

>P75054:SRP54_MYCPN Signal recognition particle protein - Mycoplasma pneumoniae|
          Length = 450

 Score = 99.4 bits (246), Expect = 6e-20
 Identities = 77/304 (25%), Positives = 139/304 (45%), Gaps = 2/304 (0%)
 Frame = +2

Query: 1076 SMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRI 1255
            SM K I    + E +D+Q  LK ++  L+  +V   + +   +++     G+ +     +
Sbjct: 13   SMQKKINAQTISE-TDVQAVLKEIRIALLDADVNLLVVKNFIKAIREQTVGQTVEPGQDL 71

Query: 1256 SSTVQTAMEEALLRILT-PRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAY 1432
               +   +++ L+ IL+ P + I   R          P            K+T   K+A 
Sbjct: 72   QKWLLKVIKQELINILSQPNQEITSKR----------PLKVMVVGLQGSGKTTTCGKLAV 121

Query: 1433 WLL-QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRN 1609
            WL  Q     M+ A D +R  A++QL T A + +   F KG +  P    KEA++    +
Sbjct: 122  WLKKQFQQKAMLVALDIYRPAAIDQLATLAEQTESVFFAKGTQA-PDQTTKEAVKTFKES 180

Query: 1610 KSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLAD 1789
                ++ DTAGR+Q N+ LM  L  + N   PD +L V + L G + ++   +F+ +L  
Sbjct: 181  GCQAIICDTAGRLQTNQELMDELVAIKNELHPDEILMVVDGLSGQEIINVAKEFHNRLK- 239

Query: 1790 LSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIV 1969
                     + G ++TK D+ D + GAALS+  +   P+  +G  +  T L++ + + I 
Sbjct: 240  ---------LTGFIITKLDS-DARAGAALSLTSLLEVPIKLMGTSEKLTGLEQFHPERIA 289

Query: 1970 KTLL 1981
              +L
Sbjct: 290  SRIL 293

---

>P75362:FTSY_MYCPN Cell division protein ftsY homolog - Mycoplasma pneumoniae|
          Length = 348

 Score = 99.4 bits (246), Expect = 6e-20
 Identities = 82/316 (25%), Positives = 140/316 (44%), Gaps = 6/316 (1%)
 Frame = +2

Query: 1055 KKKGWFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKK 1234
            K    F++    +A N V      Q   ++L + L+  ++    A K+C+++   L+ ++
Sbjct: 44   KSANSFANTINKLAANYVTVNEQFQ---ESLFEELVLLDIGYHAATKICDAIVQELKLQR 100

Query: 1235 LGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTN 1414
            +             ++E ++  L      D L +     E  K             K+T+
Sbjct: 101  VSD--------PQLIQEIIVDKLIVYYIQDKLFETDLTVEANKTNVYLFVGVNGVGKTTS 152

Query: 1415 LAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQ 1594
            LAK+A  L + N  V+M A DTFR+GAV QL   A+R+   I     +++   V    +Q
Sbjct: 153  LAKLADQLTKQNKRVLMVAGDTFRAGAVAQLAEWAQRIGCDIVLPNPKEETPAVIFRGVQ 212

Query: 1595 EATRNKSDVVLVDTAGRMQDNEPLMRALSKL------INLNKPDLVLFVGEALVGNDAVD 1756
            +  +N+ D VL DT+GR+Q+   LM  L K+      ++  KP   L V +   G   + 
Sbjct: 213  QGIQNEYDFVLCDTSGRLQNKTNLMNELKKIYQIVQKVSSAKPQETLLVLDGTTGQSGLA 272

Query: 1757 QLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYT 1936
            Q   FN+             + GI+LTK D+   K G  L++  +   PV  +G G++  
Sbjct: 273  QAKVFNEFTE----------LTGIILTKMDS-SSKGGIILAIKDLFNLPVKLIGFGETTA 321

Query: 1937 DLKKLNVKSIVKTLLK 1984
            DL   +++  V  L K
Sbjct: 322  DLAAFDLEQYVLGLTK 337

---

>O59307:SRP54_PYRHO Signal recognition 54 kDa protein - Pyrococcus horikoshii|
          Length = 443

 Score = 98.6 bits (244), Expect = 1e-19
 Identities = 78/304 (25%), Positives = 139/304 (45%), Gaps = 1/304 (0%)
 Frame = +2

Query: 1073 SSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAA-SLEGKKLGSFT 1249
            S+  K IA    ++++ ++  ++ ++  L+  +V   +  KL + +   +LE K     +
Sbjct: 11   SNALKKIARAGSVDEALVKEVVRDIQRALLQADVNVRLVLKLTKEIQRRALEEKPPAGIS 70

Query: 1250 RISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVA 1429
            +    ++   EE    + T  + I+I         + KP            K+T +AK+A
Sbjct: 71   KKEHIIKIVYEELTKFLGTEAKPIEI---------KEKPTVLLTVGVQGSGKTTTVAKLA 121

Query: 1430 YWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRN 1609
             +  +    V +   DT+R GA  QL+       I +F    EKD   +AKE ++     
Sbjct: 122  RYFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPNEKDAVKLAKEGVEYFKTR 181

Query: 1610 KSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLAD 1789
              D+++VDTAGR ++ + L+  +  +    +P  V+ V +  +G  A      +NQ LA 
Sbjct: 182  DVDLIIVDTAGRHKEEKDLIEEMRMISEEIRPHEVILVIDGTIGQQA------YNQALAF 235

Query: 1790 LSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIV 1969
                P    I  I++TK D+   K G ALS V  +G+P+ F+G G+   DL+  +    V
Sbjct: 236  KEATP----IGSIIVTKLDS-SAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPARFV 290

Query: 1970 KTLL 1981
              LL
Sbjct: 291  SRLL 294

---

>O67615:SRP54_AQUAE Signal recognition particle protein - Aquifex aeolicus|
          Length = 454

 Score = 98.6 bits (244), Expect = 1e-19
 Identities = 70/305 (22%), Positives = 144/305 (47%), Gaps = 1/305 (0%)
 Frame = +2

Query: 1070 FSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLG-SF 1246
            FS   + +     + + ++   L+ ++  L+  +V  ++A+   + +   + GK++  + 
Sbjct: 9    FSHALEKLTNARKITEKNINQTLREIRLALLEADVDYQVAKDFIKRIREKVVGKEVPKNL 68

Query: 1247 TRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKV 1426
            +     ++T  EE           +DIL   +A  ++G              K+T + K+
Sbjct: 69   SPAEFVIKTVYEEL----------VDILGGEKADLKKGT---VLFVGLQGTGKTTTIGKI 115

Query: 1427 AYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATR 1606
            A  L +    V +++ D  R  A+ QL+  A R+ +P +E         +A+ A++ A  
Sbjct: 116  ANLLKKGGHKVAVSSTDLRRPAAMLQLQRLAERVGVPYYEFEEGLGAVEIARRAVKRAKE 175

Query: 1607 NKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLA 1786
               D +L+DTAGR+  +E LM+ L ++  +  P  +L+V +A+ G  A++    F+++L 
Sbjct: 176  ESVDYLLLDTAGRLHVDEELMKELQEIKEVTNPSEILYVADAMQGQTALETAKTFHERLG 235

Query: 1787 DLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSI 1966
                      + G+++TK D  D + G ALS+  + G P+ F+G G+   D++      I
Sbjct: 236  ----------LTGVVITKMDG-DARGGLALSVKEVLGVPIKFIGVGEKIEDIEPFYPDRI 284

Query: 1967 VKTLL 1981
             + +L
Sbjct: 285  AQRIL 289

---

>Q4UK46:FTSY_RICFE Cell division protein ftsY homolog - Rickettsia felis (Rickettsia|
            azadi)
          Length = 303

 Score = 98.2 bits (243), Expect = 1e-19
 Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 6/199 (3%)
 Frame = +2

Query: 1403 KSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAK 1582
            K+T + K+A         V +AACDTFR+ AV QL T   R    +       DPA VA 
Sbjct: 114  KTTTIGKLAAMYGMQGKKVAVAACDTFRAAAVNQLSTWVDRANALLITGEESADPASVAY 173

Query: 1583 EAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINL------NKPDLVLFVGEALVGN 1744
             A++E+ +   D++ +DTAGR+ + + LM  LSK++ +      N P   + V +A+ G 
Sbjct: 174  RAMEESIKQNIDILFIDTAGRLHNKKNLMDELSKIVKVIKKLDENAPTHSVLVIDAITGQ 233

Query: 1745 DAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCG 1924
            +  +Q+  FN           A  + G+++TK D    K G  + +V     PV F+G G
Sbjct: 234  NTYNQVEHFND----------ATNLTGLIVTKLDG-SAKAGVLVGVVQKFNLPVYFIGIG 282

Query: 1925 QSYTDLKKLNVKSIVKTLL 1981
            +   DLK  N     K+L+
Sbjct: 283  EKIEDLKIFNRHDFAKSLV 301

---

>Q8KA77:FTSY_BUCAP Cell division protein ftsY homolog - Buchnera aphidicola subsp.|
            Schizaphis graminum
          Length = 351

 Score = 97.8 bits (242), Expect = 2e-19
 Identities = 68/284 (23%), Positives = 130/284 (45%), Gaps = 6/284 (2%)
 Frame = +2

Query: 1145 LKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQTAMEEALLRILTPRRSID 1324
            L+D ++  ++     +++   +      K+L +  ++   ++  M   L R+  P +   
Sbjct: 87   LEDTMLLSDIGVHTTDQIISKLINDATHKELKNPEKVYFLLKEHMYSILNRVEKPLKI-- 144

Query: 1325 ILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQ 1504
                         P+           K+T ++K+A        SVM+AA DTFR+  +EQ
Sbjct: 145  ---------SNHTPFVILVVGINGTGKTTTVSKLAKKYKLAGKSVMLAAADTFRAAGIEQ 195

Query: 1505 LRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSK 1684
            L+   +R  IP+  +    DPA VA +A++ A   K DV+++DTAGR+ +   L+  L K
Sbjct: 196  LQILGKRNNIPVISQSSGSDPASVAFDAVKSAISKKIDVLIIDTAGRLHNKLHLLEELKK 255

Query: 1685 LI------NLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFD 1846
            ++      NL+ P  ++ + +A  G + + Q   F++ +           + G+++TK D
Sbjct: 256  MVRVIKKLNLSAPHEIMLIIDACNGQNTIKQTEMFHKAIN----------LTGLVITKLD 305

Query: 1847 TIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTL 1978
                K G   S+      P+ ++G G+  TDL   N    +K++
Sbjct: 306  G-TAKGGVIFSLANQFLIPIRYIGIGEKTTDLVVFNSNDFIKSI 348

---

>P51835:FTSY_BACSU Cell division protein ftsY homolog - Bacillus subtilis|
          Length = 329

 Score = 97.8 bits (242), Expect = 2e-19
 Identities = 65/195 (33%), Positives = 102/195 (52%), Gaps = 6/195 (3%)
 Frame = +2

Query: 1403 KSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAK 1582
            K+T + K+A+ + Q   SV++AA DTFR+GA+EQL     R  +P+ ++    DPA V  
Sbjct: 133  KTTTIGKLAHKMKQEGKSVVLAAGDTFRAGAIEQLEVWGERTGVPVIKQTAGSDPAAVIY 192

Query: 1583 EAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINL------NKPDLVLFVGEALVGN 1744
            +A+  A    +DV++ DTAGR+Q+   LM+ L K+  +        P  VL   +A  G 
Sbjct: 193  DAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPHEVLLALDATTGQ 252

Query: 1745 DAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCG 1924
            +A+ Q  +F++          A  + GI LTK D    K G  L++      PV  VG G
Sbjct: 253  NAMAQAKEFSK----------ATNVTGIALTKLDG-TAKGGIVLAIRNELHIPVKLVGLG 301

Query: 1925 QSYTDLKKLNVKSIV 1969
            +   DL++ + +S V
Sbjct: 302  EKVDDLQEFDPESYV 316

---

>Q57565:SRP54_METJA Signal recognition 54 kDa protein - Methanococcus jannaschii|
          Length = 451

 Score = 97.1 bits (240), Expect = 3e-19
 Identities = 57/194 (29%), Positives = 104/194 (53%), Gaps = 1/194 (0%)
 Frame = +2

Query: 1403 KSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIF-EKGYEKDPAVVA 1579
            K+T  AK+A ++ +  L   + A DT+R  A EQL+  A ++ +PI+ ++   K P  + 
Sbjct: 113  KTTTAAKLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEKIHVPIYGDETRTKSPVDIV 172

Query: 1580 KEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQ 1759
            KE +++    K+DV+++DTAGR ++ + L+  + ++  +  PD ++ V +  +G  A  Q
Sbjct: 173  KEGMEKF--KKADVLIIDTAGRHKEEKGLLEEMKQIKEITNPDEIILVIDGTIGQQAGIQ 230

Query: 1760 LNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTD 1939
               F + + +         I  I++TK D    K G ALS V  + +P+ F+G G+   D
Sbjct: 231  AKAFKEAVGE---------IGSIIVTKLDG-SAKGGGALSAVAETKAPIKFIGIGEGIDD 280

Query: 1940 LKKLNVKSIVKTLL 1981
            L+  + K  +  LL
Sbjct: 281  LEPFDPKKFISRLL 294

---

>P66844:SRP54_MYCTU Signal recognition particle protein - Mycobacterium tuberculosis|
          Length = 525

 Score = 96.7 bits (239), Expect = 4e-19
 Identities = 80/297 (26%), Positives = 129/297 (43%), Gaps = 8/297 (2%)
 Frame = +2

Query: 1073 SSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTR 1252
            ++  + + G   L  +D+    + ++  L+  +V+  +       +     G ++ S   
Sbjct: 10   TAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERARGAEVSSALN 69

Query: 1253 ISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAY 1432
             +  V   + E L+ IL         R++  AK    P            K+T   K+A 
Sbjct: 70   PAQQVVKIVNEELISILGGET-----RELAFAKT--PPTVVMLAGLQGSGKTTLAGKLAA 122

Query: 1433 WLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIF--------EKGYEKDPAVVAKEA 1588
             L     + ++ ACD  R  AV QL+    R  +P+F        E G   DP  VA   
Sbjct: 123  RLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESG-PGDPVAVAAAG 181

Query: 1589 IQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNK 1768
            + EA     DVV+VDTAGR+  +E LM   + + +   PD VLFV +A++G DAV     
Sbjct: 182  LAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAAA 241

Query: 1769 FNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTD 1939
            F + +             G+ LTK D  D + GAALS+  ++G P++F   G+   D
Sbjct: 242  FGEGVG----------FTGVALTKLDG-DARGGAALSVREVTGVPILFASTGEKLED 287

---

>P66845:SRP54_MYCBO Signal recognition particle protein - Mycobacterium bovis|
          Length = 525

 Score = 96.7 bits (239), Expect = 4e-19
 Identities = 80/297 (26%), Positives = 129/297 (43%), Gaps = 8/297 (2%)
 Frame = +2

Query: 1073 SSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTR 1252
            ++  + + G   L  +D+    + ++  L+  +V+  +       +     G ++ S   
Sbjct: 10   TAALQGLRGKGRLTDADIDATTREIRLALLEADVSLPVVRAFIHRIKERARGAEVSSALN 69

Query: 1253 ISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAY 1432
             +  V   + E L+ IL         R++  AK    P            K+T   K+A 
Sbjct: 70   PAQQVVKIVNEELISILGGET-----RELAFAKT--PPTVVMLAGLQGSGKTTLAGKLAA 122

Query: 1433 WLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIF--------EKGYEKDPAVVAKEA 1588
             L     + ++ ACD  R  AV QL+    R  +P+F        E G   DP  VA   
Sbjct: 123  RLRGQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPESG-PGDPVAVAAAG 181

Query: 1589 IQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNK 1768
            + EA     DVV+VDTAGR+  +E LM   + + +   PD VLFV +A++G DAV     
Sbjct: 182  LAEARAKHFDVVIVDTAGRLGIDEELMAQAAAIRDAINPDEVLFVLDAMIGQDAVTTAAA 241

Query: 1769 FNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTD 1939
            F + +             G+ LTK D  D + GAALS+  ++G P++F   G+   D
Sbjct: 242  FGEGVG----------FTGVALTKLDG-DARGGAALSVREVTGVPILFASTGEKLED 287

---

>Q97ZE7:SRP54_SULSO Signal recognition 54 kDa protein - Sulfolobus solfataricus|
          Length = 447

 Score = 96.3 bits (238), Expect = 5e-19
 Identities = 56/195 (28%), Positives = 102/195 (52%), Gaps = 2/195 (1%)
 Frame = +2

Query: 1403 KSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAK 1582
            K+T   K+AY+  +    V + A D +R  A +QL     ++ + ++ +   ++P  +AK
Sbjct: 109  KTTTAGKLAYFYKKRGYKVGLVAADVYRPAAYDQLLQLGNQIGVQVYGEPNNQNPIEIAK 168

Query: 1583 EAIQEATRNKSDVVLVDTAGR--MQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVD 1756
            + +    +NK D+++VDTAGR    +   L+  + ++ ++ KPD V+ V +A +G  A D
Sbjct: 169  KGVDIFVKNKMDIIIVDTAGRHGYGEETKLLEEMKEMYDVLKPDDVILVIDASIGQKAYD 228

Query: 1757 QLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYT 1936
              ++F+Q          A  I  +++TK D    K G ALS V  +G+ + F+G G+   
Sbjct: 229  LASRFHQ----------ASPIGSVIITKMDG-TAKGGGALSAVVATGATIKFIGTGEKID 277

Query: 1937 DLKKLNVKSIVKTLL 1981
            +L+  N K  V  +L
Sbjct: 278  ELETFNAKRFVSRIL 292

---

>Q92GB8:FTSY_RICCN Cell division protein ftsY homolog - Rickettsia conorii|
          Length = 303

 Score = 96.3 bits (238), Expect = 5e-19
 Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 6/199 (3%)
 Frame = +2

Query: 1403 KSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAK 1582
            K+T + K+A         V +AACDTFR+ AV QL T A R    +       DPA VA 
Sbjct: 114  KTTTIGKLASMYSAQGKKVAVAACDTFRAAAVNQLSTWADRANALLITGEESADPASVAY 173

Query: 1583 EAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINL------NKPDLVLFVGEALVGN 1744
              ++E+ +   D++ +DTAGR+ + + LM  LSK++ +      N P   + V +A+ G 
Sbjct: 174  RGMEESIKQNIDILFIDTAGRLHNKKNLMDELSKIVKVIKKLDENAPTHSVLVIDAITGQ 233

Query: 1745 DAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCG 1924
            +  +Q+  FN           A  + G+++TK D    K G  + +V     P+ F+G G
Sbjct: 234  NTYNQVEHFND----------ATNLTGLIVTKLDG-SAKAGVIVGVVQKFNLPLYFIGIG 282

Query: 1925 QSYTDLKKLNVKSIVKTLL 1981
            +   DLK  N     + L+
Sbjct: 283  EKIEDLKIFNQHDFARNLV 301

---

>P83749:FTSY_THEAQ Cell division protein ftsY - Thermus aquaticus|
          Length = 304

 Score = 95.9 bits (237), Expect = 6e-19
 Identities = 79/299 (26%), Positives = 137/299 (45%), Gaps = 11/299 (3%)
 Frame = +2

Query: 1121 DLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQTAMEEALLRI 1300
            +L+  L+ L+  L+  +V     E++ + V AS  G+K          ++ A++E L+ +
Sbjct: 27   NLEEVLEELEMALLAADVGLSATEEILQEVRAS--GRK---------DLKEAVKEKLVGM 75

Query: 1301 LTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXX-----KSTNLAKVAYWLLQHNLSVMM 1465
            L P      LR +    ++ KP                 K+T +AK+  +       VM 
Sbjct: 76   LEPDERRATLRKLGFNPQKPKPVEPKGRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMF 135

Query: 1466 AACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGR 1645
             A DTFR+    QL    +RL IP+ +     DPA +A +A+Q       D++ VDTAGR
Sbjct: 136  CAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAYDAVQAMKARGYDLLFVDTAGR 195

Query: 1646 MQDNEPLMRALSKL------INLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPT 1807
            +     LM  L K+       +  +P  V  V +A+ G + ++Q  KF++ +        
Sbjct: 196  LHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQNGLEQAKKFHEAVG------- 248

Query: 1808 ARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLLK 1984
               + G+++TK D    K G  + +V     P+ FVG G+   DL+  + ++ V+ LL+
Sbjct: 249  ---LTGVIVTKLDG-TAKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPEAFVEALLE 303

---

>Q68VX4:FTSY_RICTY Cell division protein ftsY homolog - Rickettsia typhi|
          Length = 303

 Score = 95.9 bits (237), Expect = 6e-19
 Identities = 60/199 (30%), Positives = 100/199 (50%), Gaps = 6/199 (3%)
 Frame = +2

Query: 1403 KSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAK 1582
            K+T + K++         V +AACDTFR+ A+ QL +   R    +       DPA VA 
Sbjct: 114  KTTTIGKLSALYSAQGKKVAVAACDTFRAAAINQLSSWVDRANALLITGEVSADPASVAY 173

Query: 1583 EAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINL------NKPDLVLFVGEALVGN 1744
             AIQE+ +   D++ +DTAGR+ +N+ LM  LSK++ +      N P   + + +A+ G 
Sbjct: 174  RAIQESIKQNIDILFIDTAGRLHNNKNLMDELSKIVKVIKKLDENAPTHSILIIDAVTGQ 233

Query: 1745 DAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCG 1924
            +  +Q+  FN    D++       + G+++TK D    K G  +  V     P+ F+G G
Sbjct: 234  NTYNQIEYFN----DVTN------LTGLIITKLDG-SAKAGVLVGAVQKFNLPIYFIGIG 282

Query: 1925 QSYTDLKKLNVKSIVKTLL 1981
            +   DLK  N     ++L+
Sbjct: 283  EQIEDLKIFNRHDFSRSLV 301

---

>O05948:FTSY_RICPR Cell division protein ftsY homolog - Rickettsia prowazekii|
          Length = 303

 Score = 95.5 bits (236), Expect = 8e-19
 Identities = 60/199 (30%), Positives = 100/199 (50%), Gaps = 6/199 (3%)
 Frame = +2

Query: 1403 KSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAK 1582
            K+T + K++         V +AACDTFR+ A+ QL +   R    +       DPA VA 
Sbjct: 114  KTTTIGKLSALYSAEGKKVAVAACDTFRAAAINQLSSWVHRANALLITGKASADPASVAY 173

Query: 1583 EAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINL------NKPDLVLFVGEALVGN 1744
             AI+E+ +   D++ +DTAGR+ +N+ LM  LSK++ +      N P   + + +A+ G 
Sbjct: 174  RAIEESIKQNIDILFIDTAGRLHNNKNLMDELSKIVKVIKKLDENAPTHSILIIDAITGQ 233

Query: 1745 DAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCG 1924
            +  +Q+  FN    D++       + G+++TK D    K G  +  V     PV F+G G
Sbjct: 234  NTYNQIEYFN----DVTN------LTGLIVTKLDG-SAKAGVLVGAVQKFNLPVYFIGIG 282

Query: 1925 QSYTDLKKLNVKSIVKTLL 1981
            +   DLK  N     ++L+
Sbjct: 283  EKIEDLKIFNRHDFSRSLV 301

---

>Q977V2:SRP54_HALVO Signal recognition 54 kDa protein - Halobacterium volcanii (Haloferax|
            volcanii)
          Length = 465

 Score = 95.1 bits (235), Expect = 1e-18
 Identities = 77/298 (25%), Positives = 142/298 (47%), Gaps = 1/298 (0%)
 Frame = +2

Query: 1091 IAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAA-SLEGKKLGSFTRISSTV 1267
            + G + L++ D+Q  +K ++  L++ +V   +   L +S+   +LE +  G  +     +
Sbjct: 17   LRGKSRLDEDDVQEIVKEIQRSLLSADVDVSLVMDLSDSIKTRALEEEPPGGTSARDHVL 76

Query: 1268 QTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYWLLQH 1447
            +   EE +  I     S +I  + Q     G              K+T  AK+A+W  + 
Sbjct: 77   KIVYEELVDLI---GESTEIPLESQTIMLAG---------LQGSGKTTTSAKMAWWFSKK 124

Query: 1448 NLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVL 1627
             L   +   DTFR GA +Q +    R ++  +      DP  +A+E + EAT + +DV +
Sbjct: 125  GLRPAVIQTDTFRPGAYDQAKQMCERAEVDFYGDPDCDDPVQIAREGL-EATED-ADVHI 182

Query: 1628 VDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPT 1807
            VDTAGR    + L+  + ++  + +PDL L V +A +G  A +Q  +F++ +        
Sbjct: 183  VDTAGRHALEDDLIDEIEEIEGVVQPDLNLLVLDAAIGQGAKEQAQQFDESIG------- 235

Query: 1808 ARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 1981
               I G+++TK D    K G AL+ V  + S + F+G G++  D+++      +  LL
Sbjct: 236  ---IGGVVITKLDG-TAKGGGALTAVNETDSSIAFLGMGETVQDIERFEPNGFISRLL 289

---

>O29633:SRP54_ARCFU Signal recognition 54 kDa protein - Archaeoglobus fulgidus|
          Length = 433

 Score = 94.0 bits (232), Expect = 2e-18
 Identities = 80/302 (26%), Positives = 142/302 (47%), Gaps = 3/302 (0%)
 Frame = +2

Query: 1085 KSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISST 1264
            + IAG++ ++K  ++  +K ++  L+  +V     +++ +++      KK      +S  
Sbjct: 11   RKIAGSSSIDKKFVEEMVKEIQRALIKADVNVRQVKEISDAI------KKRA----LSED 60

Query: 1265 VQTAM--EEALLRILTPRRSIDILRDVQAAKERG-KPYXXXXXXXXXXXKSTNLAKVAYW 1435
            V  A+  +E +L+I+      ++LR V    E   K             K+T  AK+A +
Sbjct: 61   VLPALNAKEQILKIVYE----ELLRGVGEGLEIPLKKAKIMLVGLQGSGKTTTTAKMAKY 116

Query: 1436 LLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKS 1615
                 + V + A DT+R  A EQLR  A    I  + +  EKD   + K A+++      
Sbjct: 117  FKDRGMKVAVVAADTWRPAAYEQLRQLAEEYGITFYGEKGEKDAVKIVKNALEKL--KDH 174

Query: 1616 DVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLS 1795
            D++++DTAGR    + L+  + K+  + +PD  L V +A +G  A  Q   F++ +    
Sbjct: 175  DMIIIDTAGRHALEDELIDEMIKIAEVARPDYKLLVLDAAIGQLASKQAQAFHEAIG--- 231

Query: 1796 TVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKT 1975
                   I+GI++TKFD    K G ALS     G P+ F+G G+   D ++ +    V  
Sbjct: 232  -------INGIIITKFDG-TAKGGGALSAARQIGIPIAFIGTGEKVEDFERFDPAGFVSR 283

Query: 1976 LL 1981
            LL
Sbjct: 284  LL 285

---

>P57011:FTSY_NEIMB Cell division protein ftsY homolog - Neisseria meningitidis serogroup|
            B
          Length = 421

 Score = 94.0 bits (232), Expect = 2e-18
 Identities = 89/324 (27%), Positives = 151/324 (46%), Gaps = 12/324 (3%)
 Frame = +2

Query: 1046 AGQKKKGWFSS---MFKSIAGNNVLEKSDLQPAL-KALKDRLMTKNVAEEIAEKLCESVA 1213
            A + K+G   S   M KS+AG  V     +   L + L+  L+T ++  E  E L + V 
Sbjct: 123  AARLKQGLTKSRDKMAKSLAG--VFGGGQIDEDLYEELETVLITSDMGMEATEYLMKDVR 180

Query: 1214 --ASLEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXX 1387
               SL+G K G+  R       A++EAL  ++ P     +L + +      +P+      
Sbjct: 181  DRVSLKGLKDGNELR------GALKEALYDLIKPLEKPLVLPETK------EPFVIMLAG 228

Query: 1388 XXXXXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDP 1567
                 K+T++ K+A +      SV++AA DTFR+ A EQL+    R  + +  +    D 
Sbjct: 229  INGAGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNNVTVISQ-TTGDS 287

Query: 1568 AVVAKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINL------NKPDLVLFVGE 1729
            A V  +A+Q A     D+VL DTAGR+     LM  + K+  +      + P  ++ V +
Sbjct: 288  AAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLD 347

Query: 1730 ALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVM 1909
            A +G +AV+Q+  F+  L           + G+++TK D    K G   ++      PV 
Sbjct: 348  ANIGQNAVNQVKAFDDALG----------LTGLIVTKLDG-TAKGGILAALASDRPVPVR 396

Query: 1910 FVGCGQSYTDLKKLNVKSIVKTLL 1981
            ++G G+   DL+  + ++ V  LL
Sbjct: 397  YIGVGEGIDDLRPFDARAFVDALL 420

---

>P57010:FTSY_NEIMA Cell division protein ftsY homolog - Neisseria meningitidis serogroup|
            A
          Length = 421

 Score = 94.0 bits (232), Expect = 2e-18
 Identities = 89/324 (27%), Positives = 151/324 (46%), Gaps = 12/324 (3%)
 Frame = +2

Query: 1046 AGQKKKGWFSS---MFKSIAGNNVLEKSDLQPAL-KALKDRLMTKNVAEEIAEKLCESVA 1213
            A + K+G   S   M KS+AG  V     +   L + L+  L+T ++  E  E L + V 
Sbjct: 123  AARLKQGLTKSRDKMAKSLAG--VFGGGQIDEDLYEELETVLITSDMGMEATEYLMKDVR 180

Query: 1214 --ASLEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXX 1387
               SL+G K G+  R       A++EAL  ++ P     +L + +      +P+      
Sbjct: 181  DRVSLKGLKDGNELR------GALKEALYDLIKPLEKPLVLPETK------EPFVIMLAG 228

Query: 1388 XXXXXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDP 1567
                 K+T++ K+A +      SV++AA DTFR+ A EQL+    R  + +  +    D 
Sbjct: 229  INGAGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNNVTVISQ-TTGDS 287

Query: 1568 AVVAKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINL------NKPDLVLFVGE 1729
            A V  +A+Q A     D+VL DTAGR+     LM  + K+  +      + P  ++ V +
Sbjct: 288  AAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLD 347

Query: 1730 ALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVM 1909
            A +G +AV+Q+  F+  L           + G+++TK D    K G   ++      PV 
Sbjct: 348  ANIGQNAVNQVKAFDDALG----------LTGLIVTKLDG-TAKGGILAALASDRPVPVR 396

Query: 1910 FVGCGQSYTDLKKLNVKSIVKTLL 1981
            ++G G+   DL+  + ++ V  LL
Sbjct: 397  YIGVGEGIDDLRPFDARAFVDALL 420

---

>O30391:FTSY_NEIMC Cell division protein ftsY homolog - Neisseria meningitidis serogroup|
            C
          Length = 421

 Score = 93.2 bits (230), Expect = 4e-18
 Identities = 89/324 (27%), Positives = 151/324 (46%), Gaps = 12/324 (3%)
 Frame = +2

Query: 1046 AGQKKKGWFSS---MFKSIAGNNVLEKSDLQPAL-KALKDRLMTKNVAEEIAEKLCESVA 1213
            A + K+G   S   M KS+AG  V     +   L + L+  L+T ++  E  E L + V 
Sbjct: 123  AARLKQGLTKSRDKMAKSLAG--VFGGGQIDEDLYEELETVLITSDMDMEATEYLMKDVR 180

Query: 1214 --ASLEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXX 1387
               SL+G K G+  R       A++EAL  ++ P     +L + +      +P+      
Sbjct: 181  DRVSLKGLKDGNELR------GALKEALYDLIKPLEKPLVLPETK------EPFVIMLAG 228

Query: 1388 XXXXXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDP 1567
                 K+T++ K+A +      SV++AA DTFR+ A EQL+    R  + +  +    D 
Sbjct: 229  INGAGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNNVTVISQ-TTGDS 287

Query: 1568 AVVAKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINL------NKPDLVLFVGE 1729
            A V  +A+Q A     D+VL DTAGR+     LM  + K+  +      + P  ++ V +
Sbjct: 288  AAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLD 347

Query: 1730 ALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVM 1909
            A +G +AV+Q+  F+  L           + G+++TK D    K G   ++      PV 
Sbjct: 348  ANIGQNAVNQVKAFDDALG----------LTGLIVTKLDG-TAKGGILAALASDRPVPVR 396

Query: 1910 FVGCGQSYTDLKKLNVKSIVKTLL 1981
            ++G G+   DL+  + ++ V  LL
Sbjct: 397  YIGVGEGIDDLRPFDARAFVDALL 420

---

>O33013:SRP54_MYCLE Signal recognition particle protein - Mycobacterium leprae|
          Length = 521

 Score = 92.8 bits (229), Expect = 5e-18
 Identities = 74/296 (25%), Positives = 124/296 (41%), Gaps = 7/296 (2%)
 Frame = +2

Query: 1073 SSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTR 1252
            + + + + G   L  +D++   + ++  L   +V+  +       +     G ++ +   
Sbjct: 10   TGVIQGLRGKGRLTDADIEATTREIRLALFEADVSLPVVRAFVHRIKERARGTEVSAALN 69

Query: 1253 ISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAY 1432
             +  +   + E L+ IL            Q A  +  P            K+T   K+A 
Sbjct: 70   PAQQIVKIVNEELIGILGGETR-------QLAFAKTPPTVVMLAGLQGSGKTTLAGKLAV 122

Query: 1433 WLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEK-------GYEKDPAVVAKEAI 1591
             L +   + ++ ACD  R  AV QL+    R  +P+F             DP  VA   +
Sbjct: 123  RLRRQGHTPLLVACDLQRPAAVNQLQVVGERAGVPVFAPHPGASPDSGPGDPVAVASAGL 182

Query: 1592 QEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKF 1771
             EA     DVV+VDTAGR+  ++ LM     +     PD VLFV +A++G DAV     F
Sbjct: 183  VEARAKHFDVVIVDTAGRLGIDDELMAQAGAIREAINPDEVLFVLDAMIGQDAVTTAAAF 242

Query: 1772 NQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTD 1939
               +             G++LTK D  D + GAALS+  ++G P++F   G+   D
Sbjct: 243  GAGVG----------FTGVVLTKLDG-DARGGAALSVREVTGVPILFATTGEKLDD 287

---

>Q9HMN5:SRP54_HALSA Signal recognition 54 kDa protein - Halobacterium salinarium|
            (Halobacterium halobium)
          Length = 460

 Score = 92.8 bits (229), Expect = 5e-18
 Identities = 75/300 (25%), Positives = 139/300 (46%), Gaps = 2/300 (0%)
 Frame = +2

Query: 1088 SIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAA-SLEGKKLGSFTRISST 1264
            ++ G + + + D+   +K ++  L+  +V  ++   L ES+   SLE +  G  +     
Sbjct: 16   TLRGKSRISEEDVDKVVKEIQRSLLQADVDVDLVMDLSESITERSLEEEPPGGTSARDHV 75

Query: 1265 VQTAMEEALLRILTPRRSIDILRD-VQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYWLL 1441
            ++   EE L+ ++     I +    +  A  +G              K+T  AK+A+W  
Sbjct: 76   LRIVYEE-LVGLVGDSTPIPLEEQTIMLAGLQGS------------GKTTTAAKMAWWFS 122

Query: 1442 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 1621
            +  L   +   DTFR GA EQ    A R ++  + +    DP  +A++ +  A    +DV
Sbjct: 123  KKGLRPAIVQTDTFRPGAYEQAAEMADRAEVDFYGEPDSDDPVQIARDGL--AATADADV 180

Query: 1622 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTV 1801
             +VDTAGR    + L+  + ++  + +PD  L V +A +G  A  Q  +F+  +      
Sbjct: 181  HIVDTAGRHALEDDLIAEIEEIEGVVEPDRSLLVLDAAIGQGAKQQARQFDASIG----- 235

Query: 1802 PTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 1981
                 IDG+ +TK D    K G +L+ V  + S + F+G G++  D+++    S +  LL
Sbjct: 236  -----IDGVAITKLDG-TAKGGGSLTAVNETDSTIAFLGSGETVQDIERFEPDSFISRLL 289

---

>P73930:FTSY_SYNY3 Cell division protein ftsY homolog - Synechocystis sp. (strain PCC|
            6803)
          Length = 504

 Score = 92.8 bits (229), Expect = 5e-18
 Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 7/200 (3%)
 Frame = +2

Query: 1403 KSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEK-GYEKDPAVVA 1579
            K+T + K+A+   Q     ++AA DTFR+ AVEQ++    R  +P+    G   DPA V 
Sbjct: 314  KTTTIGKLAFMAKQSGYDCVIAAADTFRAAAVEQVKVWGERSGVPVIANPGQNTDPAAVV 373

Query: 1580 KEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSK---LINLNKPDLV---LFVGEALVG 1741
             + I  A     +++LVDTAGR+Q+ + LM  L+K   +I+   P+     L V +A +G
Sbjct: 374  YDGISAAQSRNVNLLLVDTAGRLQNKKNLMDELAKIRRIIDKKAPNATVESLLVLDATLG 433

Query: 1742 NDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGC 1921
             + + Q   F +          A  + G++LTK D    K G AL++      P+ F+G 
Sbjct: 434  QNGLRQAEVFAE----------AAKLSGVVLTKLDG-SAKGGVALAVAQQLNLPIRFIGA 482

Query: 1922 GQSYTDLKKLNVKSIVKTLL 1981
            G+   DL+  +    V+ LL
Sbjct: 483  GEGIEDLRPFSSYEFVEALL 502

---

>O42816:SRP54_CANAL Signal recognition particle 54 kDa protein homolog - Candida albicans|
            (Yeast)
          Length = 556

 Score = 92.4 bits (228), Expect = 7e-18
 Identities = 70/293 (23%), Positives = 131/293 (44%)
 Frame = +2

Query: 1103 NVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQTAME 1282
            N +++S++     A+  R   K + + I ++LC  V +++E  K    +  + T+     
Sbjct: 55   NKIDESNVSKETSAMNKR---KKLQKIIFDELCALVDSNVEPPKPKKLSTSTKTING--- 108

Query: 1283 EALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYWLLQHNLSVM 1462
                            + V+ +KE    +           K+T+  K+A +  +    V 
Sbjct: 109  ----------------KKVRLSKESS--HVIMFVGLQGAGKTTSCTKLAVYYKKRGFKVG 150

Query: 1463 MAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAG 1642
            +   DTFR+GA +QL+ +A +  IP +    E DP  +A E +Q+  + K D+++VDT+G
Sbjct: 151  LVCADTFRAGAFDQLKQNAIKANIPYYGSYLEPDPVKIAFEGVQKFKQEKFDIIIVDTSG 210

Query: 1643 RMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLID 1822
            R +  E L   + ++    +P   + V +  +G  A  Q   F +          +    
Sbjct: 211  RHRQEEQLFTEMVQIGEAVQPTQTIMVMDGSIGQAAESQARAFKE----------SSNFG 260

Query: 1823 GILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 1981
             I+LTK D    K G A+S V  + +P++F+G G+   DL+     + +  LL
Sbjct: 261  SIILTKMDG-HAKGGGAISAVAATKTPIVFIGTGEHVGDLEIFKPTTFISKLL 312

---

>P47294:SRP54_MYCGE Signal recognition particle protein - Mycoplasma genitalium|
          Length = 446

 Score = 91.7 bits (226), Expect = 1e-17
 Identities = 71/303 (23%), Positives = 137/303 (45%), Gaps = 1/303 (0%)
 Frame = +2

Query: 1076 SMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRI 1255
            +M K I    + EK D++  LK ++  L+  +V   + +   +++     G+ +     +
Sbjct: 13   TMQKKINAQTITEK-DVELVLKEIRIALLDADVNLLVVKNFIKAIRDKTVGQTIEPGQDL 71

Query: 1256 SSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYW 1435
              ++   ++  L+ IL+           Q   E+ +P            K+T   K+AYW
Sbjct: 72   QKSLLKTIKTELINILSQPN--------QELNEK-RPLKIMMVGLQGSGKTTTCGKLAYW 122

Query: 1436 L-LQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNK 1612
            L  ++    M+   D +R  A+EQL T +++     F +G +   A   K A+      K
Sbjct: 123  LEKKYKQKTMLVGLDIYRPAAIEQLETLSQQTNSVFFAQGTQP-VAKTTKAALSAFKTAK 181

Query: 1613 SDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADL 1792
               ++ DTAGR+Q NE LM  L  + N   PD ++ V + L G + ++    F+++L   
Sbjct: 182  CQTIICDTAGRLQTNETLMDELVSVKNELNPDEIIMVVDGLSGQEIINVAQTFHKRLK-- 239

Query: 1793 STVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVK 1972
                    + G +++K D+ D + GAALS+  +   P+  +G  +    L++ + + I  
Sbjct: 240  --------LTGFIISKLDS-DARAGAALSLASLLQVPIKLIGVSEKLDGLEQFHPERIAN 290

Query: 1973 TLL 1981
             +L
Sbjct: 291  RIL 293

---

>O27376:SRP54_METTH Signal recognition 54 kDa protein - Methanobacterium|
            thermoautotrophicum
          Length = 442

 Score = 91.7 bits (226), Expect = 1e-17
 Identities = 69/303 (22%), Positives = 141/303 (46%)
 Frame = +2

Query: 1073 SSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTR 1252
            S   K +AG  ++++  ++  +K ++  L+  +V  ++   L +S+      ++      
Sbjct: 10   SKTMKKLAGMTIVDEEVVREVIKDIQRALIQSDVNIKLVFNLSKSIEERALNEEPPKGIT 69

Query: 1253 ISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAY 1432
                + + + + ++++L  +    ++ D        KPY           K+T + K+A 
Sbjct: 70   PKEHIISIVYDEMVKLLGEKSHELVIDD--------KPYRILFLGLQGSGKTTTIGKLAR 121

Query: 1433 WLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNK 1612
            +L +   +V +   DT+R  A+EQL+ +     + I+     +D   +A++ +  A   K
Sbjct: 122  YLRKKGFTVGVVCTDTWRPAALEQLKQYTEGQDVSIYGDPQNRDALDLAEKGL--ARFQK 179

Query: 1613 SDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADL 1792
             DV++ DTAGR ++ + L+R + +L  + +P   + V +  +G  A +Q   F +     
Sbjct: 180  KDVIIFDTAGRHKEEKDLLREMEELSAIVEPHEAILVIDGTIGQQAREQALAFRK----- 234

Query: 1793 STVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVK 1972
                 A  I  I++TK D    K G ALS V   G+P+ F+G G+   DL+  + +  + 
Sbjct: 235  -----ATDIGSIIVTKLDG-SAKGGGALSAVAEIGAPIKFIGTGERIDDLEVFDPERFIS 288

Query: 1973 TLL 1981
             LL
Sbjct: 289  RLL 291

---

>O33010:FTSY_MYCLE Cell division protein ftsY homolog - Mycobacterium leprae|
          Length = 430

 Score = 91.7 bits (226), Expect = 1e-17
 Identities = 77/265 (29%), Positives = 118/265 (44%), Gaps = 4/265 (1%)
 Frame = +2

Query: 1202 ESVAASLEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXX 1381
            ESV ++L  + L S     S  +T + + L+  L P    D+ R ++A      P     
Sbjct: 181  ESVMSALRSRLLNSNVHTESDARTMLRDVLISELQP----DMDRSIRALPHADHPAVLLI 236

Query: 1382 XXXXXXXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEK 1561
                   K+T + K+A  L+     V++ A DTFR+ A +QL+T A R+   +       
Sbjct: 237  VGVNGTGKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTWASRVGAELVRGVEGA 296

Query: 1562 DPAVVAKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINL----NKPDLVLFVGE 1729
            DPA VA +A+ +     +DVV++DTAGR+     LM  L K+  +       D VL V +
Sbjct: 297  DPASVAFDAVDKGIGAGADVVVIDTAGRLHTKVGLMDELDKIKRVVTRRAAVDEVLLVLD 356

Query: 1730 ALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVM 1909
            A +G + + Q+  F + +           I G +LTK D    K G    +    G PV 
Sbjct: 357  ATIGQNGLTQVRVFAEVVD----------ITGAVLTKLDG-TAKGGIVFRIQRELGVPVK 405

Query: 1910 FVGCGQSYTDLKKLNVKSIVKTLLK 1984
             VG G+   DL        V  LL+
Sbjct: 406  LVGLGEGPDDLAPFEPAVFVDALLE 430

---

>Q9ZL80:FTSY_HELPJ Cell division protein ftsY homolog - Helicobacter pylori J99|
            (Campylobacter pylori J99)
          Length = 293

 Score = 91.3 bits (225), Expect = 2e-17
 Identities = 76/311 (24%), Positives = 135/311 (43%), Gaps = 6/311 (1%)
 Frame = +2

Query: 1067 WFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSF 1246
            +F  +   I G  V EK       + L++ L+  ++  ++ E L + +   +  K+L   
Sbjct: 4    FFKKIVNKIKGEEVKEKKRESVPKEELEEILIGFDIQYDLIESLLKHLGDLITPKQL--- 60

Query: 1247 TRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKV 1426
                       E ALLR +      D  R         KP            K+T +AK+
Sbjct: 61   -----------EVALLRFVRGESYYDKTRLKTITT---KPLVHLIVGVNGAGKTTTIAKL 106

Query: 1427 AYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATR 1606
            A   L+ +   ++ A DTFR+ AV+QL+    +L + +       DP+ +A   I+ A  
Sbjct: 107  AKLSLKQHKKALLGAGDTFRAAAVKQLQLWGEKLNVQVISAKEGSDPSSLAYNTIESAIA 166

Query: 1607 NKSDVVLVDTAGRMQDNEPLMRALSKLINL------NKPDLVLFVGEALVGNDAVDQLNK 1768
               D V +DTAGR+ +   L   LSK+ +       + P     + +   G+  + Q   
Sbjct: 167  KNIDEVFIDTAGRLHNQTNLKNELSKIAHTCSKVLKDAPFYKFLILDGTQGSSGLTQAKI 226

Query: 1769 FNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKK 1948
            F++ LA          +DG+++TK D    K GA LS++Y    P++++G G+   DL  
Sbjct: 227  FHETLA----------LDGVIMTKLDG-TSKGGAILSVLYELKLPILYLGMGEKEDDLIA 275

Query: 1949 LNVKSIVKTLL 1981
             + +  ++ L+
Sbjct: 276  FDEERFIEDLV 286

---

>Q971S9:SRP54_SULTO Signal recognition 54 kDa protein - Sulfolobus tokodaii|
          Length = 445

 Score = 89.7 bits (221), Expect = 5e-17
 Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 2/208 (0%)
 Frame = +2

Query: 1364 PYXXXXXXXXXXXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIF 1543
            PY           K+T   K+A +  +    V + A D +R  A +QL    +++ +P++
Sbjct: 95   PYVIMLVGVQGSGKTTTAGKLALFYKKKGYKVGLVAADVYRPAAYDQLVQIGKQINVPVY 154

Query: 1544 EKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGRMQDNE--PLMRALSKLINLNKPDLVL 1717
             +    D   +AK  +++    K D+++VDTAGR    E   L+  +  + +  KPD V+
Sbjct: 155  GEPNNTDAVGIAKRGVEKFLSEKYDIIIVDTAGRHGYGEEVKLLEEMKNMYSEIKPDEVI 214

Query: 1718 FVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISG 1897
             V +A +G  A D  ++F+Q          A  I  I++TK D    K G ALS V  +G
Sbjct: 215  LVIDASIGQKAYDLASRFHQ----------ASPIGSIIVTKMDG-TAKGGGALSAVAATG 263

Query: 1898 SPVMFVGCGQSYTDLKKLNVKSIVKTLL 1981
            + + F+G G+   +L+  N +  V  +L
Sbjct: 264  AAIKFIGTGEKLDELEVFNPRRFVSRIL 291

---

>O32861:FTSY_MYCHO Cell division protein ftsY homolog - Mycoplasma hominis|
          Length = 351

 Score = 89.7 bits (221), Expect = 5e-17
 Identities = 67/201 (33%), Positives = 101/201 (50%), Gaps = 7/201 (3%)
 Frame = +2

Query: 1403 KSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGY-EKDPAVVA 1579
            K+T+++K+A  L+     V++AA DTFR+ AVEQL   A+R+   I      E DPA V 
Sbjct: 158  KTTSISKIAKKLIDEGKKVLIAAGDTFRAAAVEQLEIWAKRVGADIVTPNENEVDPAAVV 217

Query: 1580 KEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINL------NKPDLVLFVGEALVG 1741
              AI  A   K D+++VDTAGR+Q+   LM  L+K+  +      + P   L V +A  G
Sbjct: 218  YRAIDIAKSKKYDILIVDTAGRLQNKVNLMNELAKINRVLASKIPDAPHESLLVLDATTG 277

Query: 1742 NDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGC 1921
             + V Q   F +             + GI+LTK D    K G  L++    G  V ++G 
Sbjct: 278  QNGVIQARVFKESTP----------LTGIILTKMDG-TSKGGIVLTIKDEIGLFVKYIGL 326

Query: 1922 GQSYTDLKKLNVKSIVKTLLK 1984
            G+   DL + ++ S +  L K
Sbjct: 327  GEKVDDLAEFDLDSYIYGLTK 347

---

>Q8THD0:SRP54_METAC Signal recognition 54 kDa protein - Methanosarcina acetivorans|
          Length = 440

 Score = 89.4 bits (220), Expect = 6e-17
 Identities = 83/304 (27%), Positives = 138/304 (45%), Gaps = 12/304 (3%)
 Frame = +2

Query: 1106 VLEK--SDLQPALKAL--KDRLMTKNVAEEIAEKLCESVAASLEGKK-LGSFTRISSTVQ 1270
            V+EK    LQ ALK L    R+  + V E + +     + A +  K  +G   RI    +
Sbjct: 2    VMEKLGDSLQGALKKLIGAGRIDERTVNEVVKDIQRALLQADVNVKLVMGMSQRIK---E 58

Query: 1271 TAMEEALLRILTPRRSI------DILRDV-QAAKERGKPYXXXXXXXXXXXKSTNLAKVA 1429
             AM+E     + PR  +      +++  + + A+ + KP            K+T+ AK+A
Sbjct: 59   RAMKEEPPAGMNPREHVIRIVYQELMEIIGKGAEIQLKPQTIMMVGLQGSGKTTSAAKLA 118

Query: 1430 YWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRN 1609
             +  +  L   + A DTFR GA  QL+T A +L +  + +    D   + K  ++     
Sbjct: 119  RYFQRKGLKAGVVAADTFRPGAYHQLKTLAEKLNVGFYGEEGNPDAVEITKNGLKAL--E 176

Query: 1610 KSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLAD 1789
            K D+ +VDTAGR      L+  + ++  + KPD    V +A +G  A  Q + FN  +  
Sbjct: 177  KYDIRIVDTAGRHALEADLIEEMERIHAVAKPDHKFMVLDAGIGQQASQQAHAFNDSVG- 235

Query: 1790 LSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIV 1969
                     I G+++TK D    K G ALS V  + +P+ F+G G++  D +K      +
Sbjct: 236  ---------ITGVIITKLDG-TAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFI 285

Query: 1970 KTLL 1981
              LL
Sbjct: 286  SRLL 289

---

>P66842:FTSY_MYCTU Cell division protein ftsY homolog - Mycobacterium tuberculosis|
          Length = 422

 Score = 89.4 bits (220), Expect = 6e-17
 Identities = 75/263 (28%), Positives = 114/263 (43%), Gaps = 4/263 (1%)
 Frame = +2

Query: 1205 SVAASLEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXX 1384
            SV + L  +      R  +  +  + + L+  L P       R ++A    G P      
Sbjct: 174  SVVSQLRSRLASGNVRTEADARAVLRDVLINELQPGMD----RSIRALPHAGHPSVLLVV 229

Query: 1385 XXXXXXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKD 1564
                  K+T + K+A  L+     V++ A DTFR+ A +QL+T A R+   +       D
Sbjct: 230  GVNGTGKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTWAARVGAAVVRGPEGAD 289

Query: 1565 PAVVAKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINL----NKPDLVLFVGEA 1732
            PA VA +A+ +     +DVVL+DTAGR+     LM  L K+  +       D VL V +A
Sbjct: 290  PASVAFDAVDKGIAAGADVVLIDTAGRLHTKVGLMDELDKVKRVVTRRASVDEVLLVLDA 349

Query: 1733 LVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMF 1912
             +G + + Q   F  ++ D+S         G +LTK D    K G    +    G PV  
Sbjct: 350  TIGQNGLAQARVF-AEVVDIS---------GAVLTKLDG-TAKGGIVFRVQQELGVPVKL 398

Query: 1913 VGCGQSYTDLKKLNVKSIVKTLL 1981
            VG G+   DL      + V  LL
Sbjct: 399  VGLGEGPDDLAPFEPAAFVDALL 421

---

>P66843:FTSY_MYCBO Cell division protein ftsY homolog - Mycobacterium bovis|
          Length = 422

 Score = 89.4 bits (220), Expect = 6e-17
 Identities = 75/263 (28%), Positives = 114/263 (43%), Gaps = 4/263 (1%)
 Frame = +2

Query: 1205 SVAASLEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXX 1384
            SV + L  +      R  +  +  + + L+  L P       R ++A    G P      
Sbjct: 174  SVVSQLRSRLASGNVRTEADARAVLRDVLINELQPGMD----RSIRALPHAGHPSVLLVV 229

Query: 1385 XXXXXXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKD 1564
                  K+T + K+A  L+     V++ A DTFR+ A +QL+T A R+   +       D
Sbjct: 230  GVNGTGKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTWAARVGAAVVRGPEGAD 289

Query: 1565 PAVVAKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINL----NKPDLVLFVGEA 1732
            PA VA +A+ +     +DVVL+DTAGR+     LM  L K+  +       D VL V +A
Sbjct: 290  PASVAFDAVDKGIAAGADVVLIDTAGRLHTKVGLMDELDKVKRVVTRRASVDEVLLVLDA 349

Query: 1733 LVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMF 1912
             +G + + Q   F  ++ D+S         G +LTK D    K G    +    G PV  
Sbjct: 350  TIGQNGLAQARVF-AEVVDIS---------GAVLTKLDG-TAKGGIVFRVQQELGVPVKL 398

Query: 1913 VGCGQSYTDLKKLNVKSIVKTLL 1981
            VG G+   DL      + V  LL
Sbjct: 399  VGLGEGPDDLAPFEPAAFVDALL 421

---

>O25458:FTSY_HELPY Cell division protein ftsY homolog - Helicobacter pylori|
            (Campylobacter pylori)
          Length = 293

 Score = 89.4 bits (220), Expect = 6e-17
 Identities = 76/311 (24%), Positives = 134/311 (43%), Gaps = 6/311 (1%)
 Frame = +2

Query: 1067 WFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSF 1246
            +F  +   I G    EK       + L++ L+  ++  ++ E L + +   +  K+L   
Sbjct: 4    FFKKIVNKIKGEEAKEKKRQSVPKEELEEILIGFDIQYDLIESLLKHLGDLITPKQL--- 60

Query: 1247 TRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKV 1426
                       E ALLR +      D  R         KP            K+T +AK+
Sbjct: 61   -----------EVALLRFVRGDSYYDKTRLKTITT---KPLVHLIVGVNGAGKTTTIAKL 106

Query: 1427 AYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATR 1606
            A   L+ +   ++ A DTFR+ AV+QL+    +L I +       DP+ +A   I+ A  
Sbjct: 107  AKLSLKQHKKALLGAGDTFRAAAVKQLQLWGEKLNIQVISAKEGSDPSSLAYNTIESAIA 166

Query: 1607 NKSDVVLVDTAGRMQDNEPLMRALSKL------INLNKPDLVLFVGEALVGNDAVDQLNK 1768
               D V +DTAGR+ +   L   LSK+      +  + P     + +   G+  + Q   
Sbjct: 167  KNIDEVFIDTAGRLHNQTNLKNELSKIARTCSKVLKDAPFYKFLILDGTQGSSGLTQAKI 226

Query: 1769 FNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKK 1948
            F++ LA          +DG+++TK D    K GA LS++Y    P++++G G+   DL  
Sbjct: 227  FHETLA----------LDGVIMTKLDG-TSKGGAILSVLYELKLPILYLGMGEKEDDLIA 275

Query: 1949 LNVKSIVKTLL 1981
             + +  ++ L+
Sbjct: 276  FDEERFIEDLV 286

---

>P14929:FTSY_NEIGO Cell division protein ftsY homolog - Neisseria gonorrhoeae|
          Length = 416

 Score = 89.0 bits (219), Expect = 8e-17
 Identities = 89/324 (27%), Positives = 152/324 (46%), Gaps = 12/324 (3%)
 Frame = +2

Query: 1046 AGQKKKGWFSS---MFKSIAGNNVLEKSDLQPAL-KALKDRLMTKNVAEEIAEKLCESVA 1213
            A + K+G   S   M KS+AG  V     +   L + L+  L+T ++  E  E L + V 
Sbjct: 119  AARLKQGLAKSRDKMAKSLAG--VFGGGQIGEDLYEELETVLITGDMGMEATEYLMKDVR 176

Query: 1214 A--SLEGKKLGSFTRISSTVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXX 1387
               SL+G K G+  R       A++EAL  ++ P     +L + +      +P+      
Sbjct: 177  GRVSLKGLKDGNELR------GALKEALYDLIKPLEKPLVLPETK------EPFVIMLAG 224

Query: 1388 XXXXXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDP 1567
                 K+T++ K+A +      SV++AA DTFR+ A EQL+    R  + +  +    D 
Sbjct: 225  INGAGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGGRNNVTVISQ-TTGDS 283

Query: 1568 AVVAKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINL------NKPDLVLFVGE 1729
            A V  +A+Q A + + D+VL DTAGR+     LM  + K+  +        P  ++ V +
Sbjct: 284  AAVCFDAVQ-AAKARIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAIPGAPHEIIVVLD 342

Query: 1730 ALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVM 1909
            A +G +AV+Q+  F+  L           + G+++TK D    K G   ++      PV 
Sbjct: 343  ANIGQNAVNQVKAFDDALG----------LTGLIVTKLDG-TAKGGILAALASDRPVPVR 391

Query: 1910 FVGCGQSYTDLKKLNVKSIVKTLL 1981
            ++G G+   DL+  + ++ V  LL
Sbjct: 392  YIGVGEGIDDLRPFDARAFVDRLL 415

---

>P47539:FTSY_MYCGE Cell division protein ftsY homolog - Mycoplasma genitalium|
          Length = 346

 Score = 87.4 bits (215), Expect = 2e-16
 Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 7/286 (2%)
 Frame = +2

Query: 1145 LKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISSTVQTAMEEALLRILTPRRSID 1324
            L + L+  +V    A K+C+++   ++  ++  F  I   +   +++ ++  +      D
Sbjct: 71   LFEGLVLLDVGYHAANKICDAIIEQIKLNRITDFQLIKELI---IDQIIVYYIQ-----D 122

Query: 1325 ILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQ 1504
             L D     +                K+T LAK+A + ++ N  V++ A DTFR+GA+EQ
Sbjct: 123  KLFDTDLIVKPNFTNVYLFVGVNGVGKTTTLAKIADFFIKQNKRVLLVAGDTFRAGAIEQ 182

Query: 1505 LRTHARRLQIPI-FEKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALS 1681
            L   A+ L   I      E+ PAV+ +  +++   +K D VL DT+GR+Q+   LM  L 
Sbjct: 183  LNQWAKLLNCDIVLPNPKEQTPAVIFR-GVKKGIDDKYDFVLCDTSGRLQNKLNLMNELQ 241

Query: 1682 KLINL------NKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKF 1843
            K+  +      ++P   L V +  VG   + Q   FN+             + GI+LTK 
Sbjct: 242  KIYQIIQKVSGSEPSETLLVLDGTVGQTGLSQAKVFNE----------FSKLTGIVLTKM 291

Query: 1844 DTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 1981
            D    K G  L++  +   PV  +G G+  +DL   +++  V  LL
Sbjct: 292  DG-SAKGGIILAIKDMFNLPVKLIGFGEKTSDLAIFDLEKYVLGLL 336

---

>O07853:SRP54_SULAC Signal recognition 54 kDa protein - Sulfolobus acidocaldarius|
          Length = 444

 Score = 87.0 bits (214), Expect = 3e-16
 Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 2/208 (0%)
 Frame = +2

Query: 1364 PYXXXXXXXXXXXKSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIF 1543
            PY           K+T   K+A +  +    V + A D +R  A EQL    +++ IP++
Sbjct: 95   PYIIMLVGVQGSGKTTTSGKLALFYKKKGYKVGLVAADIYRPAAYEQLIQIGQQINIPVY 154

Query: 1544 EKGYEKDPAVVAKEAIQEATRNKSDVVLVDTAGR--MQDNEPLMRALSKLINLNKPDLVL 1717
             +   K+P  +A   +++  + K ++V++DTAGR    +   L+  +  + +   PD V+
Sbjct: 155  GEPGNKNPIEIATNGLEKFLKEKMNIVIIDTAGRHGYGEEASLLEEMKSMYDKIHPDEVI 214

Query: 1718 FVGEALVGNDAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISG 1897
             V +A +G  A D  ++F+Q          A  I  ++++K D    K G ALS V  +G
Sbjct: 215  LVIDASIGQKAYDLASRFHQ----------ASPIGSLIVSKMDG-TAKGGGALSAVIATG 263

Query: 1898 SPVMFVGCGQSYTDLKKLNVKSIVKTLL 1981
            + + F+G G+   +L+  N +  V  LL
Sbjct: 264  AQIKFIGTGEKLDELEVFNPRRFVSRLL 291

---

>Q8PXF3:SRP54_METMA Signal recognition 54 kDa protein - Methanosarcina mazei|
            (Methanosarcina frisia)
          Length = 443

 Score = 85.5 bits (210), Expect = 9e-16
 Identities = 59/193 (30%), Positives = 93/193 (48%)
 Frame = +2

Query: 1403 KSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAK 1582
            K+T+ AK+A +  +  L   + A DTFR GA  QL+T + +L +  +  G E +P  V  
Sbjct: 110  KTTSAAKLARYFQRKGLKAGVVAADTFRPGAYHQLKTLSEKLNVGFY--GEEGNPDAVEI 167

Query: 1583 EAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQL 1762
                     K D+ +VDTAGR      L+  + ++  + KPD    V +A +G  A  Q 
Sbjct: 168  TIHGLKALEKYDIKIVDTAGRHALEADLIEEMERIHAVAKPDHKFMVLDAGIGQQASQQA 227

Query: 1763 NKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDL 1942
            + FN  +           I G+++TK D    K G ALS V  + +P+ F+G G++  D 
Sbjct: 228  HAFNDSVG----------ITGVIITKLDG-TAKGGGALSAVSETKAPIAFIGVGETPEDF 276

Query: 1943 KKLNVKSIVKTLL 1981
            +K      +  LL
Sbjct: 277  EKFEADRFISRLL 289

---

>Q979Y8:SRP54_THEVO Signal recognition 54 kDa protein - Thermoplasma volcanium|
          Length = 455

 Score = 80.9 bits (198), Expect = 2e-14
 Identities = 73/300 (24%), Positives = 129/300 (43%), Gaps = 1/300 (0%)
 Frame = +2

Query: 1085 KSIAGNNVLEKSDLQPALKALKDRLMTKNV-AEEIAEKLCESVAASLEGKKLGSFTRISS 1261
            + I G+  ++K+ ++   K L+  L+  +V  + +     E    +LE K          
Sbjct: 15   RKITGSTYIDKNTVKEISKDLQRILLKADVNVQTVLNITKEMERRALEEKPPVGMAHQDY 74

Query: 1262 TVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYWLL 1441
             V+   EE LL+IL    ++++           KP            K+T+  K++ + +
Sbjct: 75   MVKIIYEE-LLKILGEPSNVEL-----------KPQTIMLVGLYGHGKTTSAGKLSRFFM 122

Query: 1442 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 1621
            +  LS  + A D  R  A EQL+  A  +    +    EKDP  + K  ++      + V
Sbjct: 123  KKGLSAGLIAADVHRYAAYEQLQQIAESVNAKFYGDPKEKDPVKIIKNGLE--VLKDAQV 180

Query: 1622 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTV 1801
             ++DT+GR   +  L+  + ++    KPD VL V +A +G  A  +    N  +      
Sbjct: 181  KIIDTSGRDSLDSDLIEEIRRIKEAVKPDQVLMVIDATMGQQAGPESKAINDAVG----- 235

Query: 1802 PTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 1981
                 + GI++TK D    K G ALS V     P+ F+G G+   D++  + K  +  LL
Sbjct: 236  -----VTGIIITKMDG-TAKGGGALSAVAKMRVPIYFIGTGEHMDDMEIFDPKKFLSRLL 289

---

>Q89B28:FTSY_BUCBP Cell division protein ftsY homolog - Buchnera aphidicola subsp.|
            Baizongia pistaciae
          Length = 397

 Score = 79.3 bits (194), Expect = 6e-14
 Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 6/202 (2%)
 Frame = +2

Query: 1403 KSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAK 1582
            K+T + K+A    +   SV++AA DTFR+ A++QL+       + +  +    DPA V  
Sbjct: 204  KTTLIGKLAKNYKKKGKSVILAAGDTFRAAAIDQLKLWGEINSVSVITREIGSDPASVVY 263

Query: 1583 EAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKL------INLNKPDLVLFVGEALVGN 1744
            +AI+ A     D++++DTAGR+ +   LM  L K+      I+       + V +A +G 
Sbjct: 264  DAIKIAKLKCIDILIIDTAGRLHNKNNLMEELKKIKRVIHKIDSTISQETMLVLDACIGQ 323

Query: 1745 DAVDQLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCG 1924
            +++ Q+  F++ L           + G+++TK D+   K G   S+      PV ++  G
Sbjct: 324  NSIKQVKIFHESLN----------VTGLVITKLDS-TAKGGVIFSIAQEFLIPVRYISFG 372

Query: 1925 QSYTDLKKLNVKSIVKTLLK*N 1990
            + + D++  N    V  +L  N
Sbjct: 373  EDFEDIQVFNSNIFVNAILSNN 394

---

>Q9YB62:SRP54_AERPE Signal recognition 54 kDa protein - Aeropyrum pernix|
          Length = 441

 Score = 77.0 bits (188), Expect = 3e-13
 Identities = 53/195 (27%), Positives = 97/195 (49%), Gaps = 2/195 (1%)
 Frame = +2

Query: 1403 KSTNLAKVAYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAK 1582
            K+T   K+AY+ ++    V + + DT R GA EQL+  A      +F    E DPA +A+
Sbjct: 109  KTTTAGKLAYYYVRRGYKVGLVSSDTHRPGAYEQLKRLAEEAG-AMFYGEREGDPAEIAR 167

Query: 1583 EAIQEATRNKSDVVLVDTAGRMQDNEP--LMRALSKLINLNKPDLVLFVGEALVGNDAVD 1756
              +++     +++V+VDTAGR    E   L+  +  + +  +PD V  V +A +G  A+ 
Sbjct: 168  RGLEDLLSRGAEIVIVDTAGRHGHGEEARLLDEMKAIASKVRPDEVALVIDASIGQKAMG 227

Query: 1757 QLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYT 1936
               +F++             I  I++TK D    + G AL+   ++G+ + F+G G++  
Sbjct: 228  LAERFHKSTP----------IGSIIVTKMDG-TARGGGALTAAAVTGARIKFIGTGETLG 276

Query: 1937 DLKKLNVKSIVKTLL 1981
            +L+    +  V  +L
Sbjct: 277  ELEPFAPRRFVARIL 291

---

>Q9HKT0:SRP54_THEAC Signal recognition 54 kDa protein - Thermoplasma acidophilum|
          Length = 456

 Score = 76.3 bits (186), Expect = 5e-13
 Identities = 72/300 (24%), Positives = 126/300 (42%), Gaps = 1/300 (0%)
 Frame = +2

Query: 1085 KSIAGNNVLEKSDLQPALKALKDRLMTKNV-AEEIAEKLCESVAASLEGKKLGSFTRISS 1261
            + I G++ ++K  ++   K L+  L+  +V  + + +   E    +LE K          
Sbjct: 15   RKITGSSYIDKETVKEISKDLQRILLKADVNVKTVLQVTKEMERRALEEKPPAGMAHQDY 74

Query: 1262 TVQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVAYWLL 1441
             V+   EE LL+IL    ++ +           KP            K+T   K+A +  
Sbjct: 75   MVRIIYEE-LLKILGEPSNVKL-----------KPQTIMLVGLYGNGKTTTAGKLARFFA 122

Query: 1442 QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSDV 1621
            +  L+  + A D  R  A +QL+  A  +    +    EKDP  + K  +++       V
Sbjct: 123  KKGLNSGLIAADVHRYAAYDQLKQIASEVNAKFYGDQSEKDPVRLIKHGLEQL--KDVAV 180

Query: 1622 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLSTV 1801
             ++DT+GR   +  L   + ++     PD VL + +A +G  A  +   FN  +      
Sbjct: 181  KIIDTSGRDSMDAELFDEIRRIKEAVAPDEVLMIIDATMGQQAGPEAKAFNDAIG----- 235

Query: 1802 PTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKSIVKTLL 1981
                 + GI++TK D    K G ALS V     P+ F+G G+   DL+  + K  +  LL
Sbjct: 236  -----VTGIIITKMDG-TAKGGGALSAVAEIHVPIYFIGTGEHMDDLEVFDPKKFLSRLL 289

---

>O52908:FLHF_CAMJE Flagellar biosynthesis protein flhF - Campylobacter jejuni|
          Length = 484

 Score = 65.1 bits (157), Expect = 1e-09
 Identities = 82/305 (26%), Positives = 129/305 (42%), Gaps = 5/305 (1%)
 Frame = +2

Query: 1085 KSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISST 1264
            K+ A  N++   +     K  K+  M +N  E I +   E++ A+++  K          
Sbjct: 207  KAEARKNLMIPPEFASIYKQAKESGMLENHLEAIMKATIENMPAAMKTNK--------DA 258

Query: 1265 VQTAMEEALLRILTPRRSIDILRDVQAAKERGKPYXXXXXXXXXXXKSTNLAKVA--YWL 1438
            VQ      L  IL  R   DI           K             K+T LAK+A  Y  
Sbjct: 259  VQRYFHSLLRNILPCRVESDIK----------KQKIMMLVGPTGVGKTTTLAKLAFRYAY 308

Query: 1439 LQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSD 1618
                    +   DT+R GAVEQL  +A+ +++PI +    KD      EAI+  + N  +
Sbjct: 309  GDKRYKTGIITLDTYRIGAVEQLFQYAKMMKLPIIDSIEPKD----LDEAIK--SLNNCE 362

Query: 1619 VVLVDTAGRMQ-DNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLNKFNQKLADLS 1795
            V+LVDT G  Q D   L +    L++ N          A +  + V   N  ++ L ++ 
Sbjct: 363  VILVDTIGNSQYDQSKLAKTKEFLMHSN----------AEIDVNLVVSANTKHEDLMEIY 412

Query: 1796 TVPTARLIDGILLTKFDTIDDKV-GAALSMVYISGSPVMFVGCGQSY-TDLKKLNVKSIV 1969
               +   ID +++TKFD  + KV G   S+VY +  P+ F   GQ    DL+  N   +V
Sbjct: 413  KNFSFLNIDTLIITKFD--ETKVFGNIFSLVYETNIPLSFFSIGQEVPDDLEVANSDFLV 470

Query: 1970 KTLLK 1984
              +L+
Sbjct: 471  HCILE 475

---

>O67266:FLHF_AQUAE Flagellar biosynthesis protein flhF - Aquifex aeolicus|
          Length = 373

 Score = 62.8 bits (151), Expect = 6e-09
 Identities = 73/306 (23%), Positives = 131/306 (42%), Gaps = 8/306 (2%)
 Frame = +2

Query: 1091 IAGNNVLEKSD--LQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLGSFTRISST 1264
            + G  ++EK      P +K   ++L+ KN+++ IAEK+ +         K+  F      
Sbjct: 92   VKGEKIVEKGSDTYAPRVKRYLEKLVIKNISKNIAEKIIQDACGYDIDNKIYDF---KDE 148

Query: 1265 VQTAMEEALLRILTPRRSIDILRDVQAAKE--RGKPYXXXXXXXXXXXKSTNLAKVAYWL 1438
              T++ E+            I ++++  +E  +  P            K+T LAK+A+  
Sbjct: 149  PYTSLRES------------IEKNIKLNEEFIQNPPKVVALVGPTGVGKTTTLAKLAHLF 196

Query: 1439 LQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNKSD 1618
             ++   V + + D FR GA EQL+  A  L++P   K  +   A      IQ    +  D
Sbjct: 197  KKNKKKVGIISLDCFRVGAFEQLKAFAEVLEVPF--KLADSPRAF----NIQLLEMDDRD 250

Query: 1619 VVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVG---EALVGNDAVDQLNKFNQKLAD 1789
            V+LVDTAGR   +   ++ L     ++   + L +      LV  +A+ Q   F+     
Sbjct: 251  VILVDTAGRSHYDVIRLKELETYFKVSDISVYLTLAANLSELVMYEAIMQFGMFS----- 305

Query: 1790 LSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSY-TDLKKLNVKSI 1966
                     I G++ TK D      G+ +++ Y +  PV+    GQS   D+   N   +
Sbjct: 306  ---------ISGLIFTKLDE-TPYPGSMVNVAYRTQYPVVCFTMGQSIPEDIVVANYDYL 355

Query: 1967 VKTLLK 1984
            V+ +L+
Sbjct: 356  VRLILE 361

---

>Q01960:FLHF_BACSU Flagellar biosynthesis protein flhF - Bacillus subtilis|
          Length = 366

 Score = 49.7 bits (117), Expect = 5e-05
 Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
 Frame = +2

Query: 1403 KSTNLAKVA-YWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVA 1579
            K+T LAK+A   +L+ +  +     DT+R  AVEQL+T+A  LQ P+ E  Y K+    A
Sbjct: 188  KTTTLAKLAAISMLEKHKKIAFITTDTYRIAAVEQLKTYAELLQAPL-EVCYTKEEFQQA 246

Query: 1580 KEAIQEATRNKSDVVLVDTAGR 1645
            KE   E      D V VDTAGR
Sbjct: 247  KELFSE-----YDHVFVDTAGR 263

---

>O52256:FLHF_PSEPU Flagellar biosynthesis protein flhF - Pseudomonas putida|
          Length = 437

 Score = 46.2 bits (108), Expect = 6e-04
 Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
 Frame = +2

Query: 1403 KSTNLAKVA--YWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVV 1576
            K+T LAK+A  Y L     ++ + + D+FR GA EQL+T  R L +P+       DP   
Sbjct: 231  KTTTLAKLAARYVLKYGAQNLALVSMDSFRIGAQEQLKTLGRILNVPV----TYVDPGQS 286

Query: 1577 AKEAIQEATRNKSDVVLVDTAGRMQDNEPLMR 1672
               A++   R +  VVL+DTAG +Q ++P +R
Sbjct: 287  LAAALEPLLRKR--VVLIDTAG-LQASDPALR 315

---

>Q9I3P8:FLHF_PSEAE Flagellar biosynthesis protein flhF - Pseudomonas aeruginosa|
          Length = 429

 Score = 43.1 bits (100), Expect = 0.005
 Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 2/181 (1%)
 Frame = +2

Query: 1403 KSTNLAKVA--YWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVV 1576
            K+T LAK+A  Y L     S+ + + D++R GA EQ++T  R L +P+       DP   
Sbjct: 222  KTTTLAKMAARYVLKYGAQSLALVSMDSYRIGAQEQIKTLGRILNVPV----TLVDPGQS 277

Query: 1577 AKEAIQEATRNKSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVD 1756
              +A+    R +  +VL+DTAG +  ++P +R   +L  L  P L        V N  V 
Sbjct: 278  LIQALAPLARKR--MVLIDTAG-LPASDPALR--MQLEALASPSL-------NVKNYLVM 325

Query: 1757 QLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYT 1936
                 +Q L           + G +LTK D     +G ++++      PV ++  G    
Sbjct: 326  ATTSQSQVLKSAYQTYRHCGLAGCILTKLDEA-GSLGESMALAIAQRLPVAYLADGPRIP 384

Query: 1937 D 1939
            D
Sbjct: 385  D 385

---

>Q44758:FLHF_BORBU Flagellar biosynthesis protein flhF - Borrelia burgdorferi (Lyme|
            disease spirochete)
          Length = 388

 Score = 37.0 bits (84), Expect = 0.35
 Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 10/185 (5%)
 Frame = +2

Query: 1403 KSTNLAKVA--YWLL--QHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 1570
            K+T +AK+A  Y +     +L++ +   D +R GA +Q++T+   + IP+  +  E    
Sbjct: 187  KTTTIAKLAAIYGINGESKSLNIKIITIDNYRIGAKKQIQTYGDIMGIPV--RAIES--- 241

Query: 1571 VVAKEAIQEATRNKS-DVVLVDTAGRMQDNEPLMRALSKLINL--NKPDLVLFVGEALVG 1741
               K+   E T +K  D++LVDT G+   +   +  + +L+N      +  L V      
Sbjct: 242  --FKDLKDEITDSKDFDLILVDTIGKSPKDFMKLAEMKELLNACGRDAEFHLAVSSTTKT 299

Query: 1742 NDAVD---QLNKFNQKLADLSTVPTARLIDGILLTKFDTIDDKVGAALSMVYISGSPVMF 1912
            +D  +   Q + FN K               ++ TK D     VG  +S++Y     V +
Sbjct: 300  SDVKEIFHQFSPFNYKT--------------VIFTKVDE-TTCVGNLISLIYEMKKVVSY 344

Query: 1913 VGCGQ 1927
            V  GQ
Sbjct: 345  VTDGQ 349

---

>Q03391:NMDE4_MOUSE Glutamate [NMDA] receptor subunit epsilon-4 precursor - Mus musculus|
            (Mouse)
          Length = 1323

 Score = 33.5 bits (75), Expect = 3.9
 Identities = 31/107 (28%), Positives = 39/107 (36%), Gaps = 9/107 (8%)
 Frame = -1

Query: 1010 RYRCSDPRPYPSCCPPGW*APSLSPHPLSRQ-------LGP*SPASRSWAVCXXXXXXXX 852
            R RC  PRP+P        AP+ +PH    +       L P +P SRS            
Sbjct: 1211 RARCGCPRPHPHRPRASHRAPAAAPHHHRHRRAAGGWDLPPPAPTSRS------------ 1258

Query: 851  XXXXXXXXXXXSHQSSCRRHRPSFLLSSYVRYLHRRPH--RWGPRSP 717
                          SSC R  P+  L+   R+  R PH   WGP  P
Sbjct: 1259 ----------LEDLSSCPRAAPTRRLTGPSRHARRCPHAAHWGPPLP 1295

---

>Q8FXX5:SYFA_BRUSU Phenylalanyl-tRNA synthetase alpha chain - Brucella suis|
          Length = 369

 Score = 32.3 bits (72), Expect = 8.6
 Identities = 21/60 (35%), Positives = 34/60 (56%)
 Frame = +2

Query: 1058 KKGWFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKL 1237
            KKG  S   K++ G +  E+    PA+  LK+R +T+ ++E   E    +VAA LE +K+
Sbjct: 34   KKGTVSEKLKTLGGMSPEERQMQGPAINGLKNR-VTEALSERRTELRKAAVAARLEREKV 92

---

>Q8YE73:SYFA_BRUME Phenylalanyl-tRNA synthetase alpha chain - Brucella melitensis|
          Length = 369

 Score = 32.3 bits (72), Expect = 8.6
 Identities = 21/60 (35%), Positives = 34/60 (56%)
 Frame = +2

Query: 1058 KKGWFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKL 1237
            KKG  S   K++ G +  E+    PA+  LK+R +T+ ++E   E    +VAA LE +K+
Sbjct: 34   KKGTVSEKLKTLGGMSPEERQMQGPAINGLKNR-VTEALSERRTELRKAAVAARLEREKV 92

---

>Q57AE0:SYFA_BRUAB Phenylalanyl-tRNA synthetase alpha chain - Brucella abortus|
          Length = 369

 Score = 32.3 bits (72), Expect = 8.6
 Identities = 21/60 (35%), Positives = 34/60 (56%)
 Frame = +2

Query: 1058 KKGWFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKL 1237
            KKG  S   K++ G +  E+    PA+  LK+R +T+ ++E   E    +VAA LE +K+
Sbjct: 34   KKGTVSEKLKTLGGMSPEERQMQGPAINGLKNR-VTEALSERRTELRKAAVAARLEREKV 92

---

>Q2YQV5:SYFA_BRUA2 Phenylalanyl-tRNA synthetase alpha chain - Brucella abortus (strain|
            2308)
          Length = 369

 Score = 32.3 bits (72), Expect = 8.6
 Identities = 21/60 (35%), Positives = 34/60 (56%)
 Frame = +2

Query: 1058 KKGWFSSMFKSIAGNNVLEKSDLQPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKL 1237
            KKG  S   K++ G +  E+    PA+  LK+R +T+ ++E   E    +VAA LE +K+
Sbjct: 34   KKGTVSEKLKTLGGMSPEERQMQGPAINGLKNR-VTEALSERRTELRKAAVAARLEREKV 92

---

>O05412:MURI2_BACSU Glutamate racemase 2 - Bacillus subtilis|
          Length = 265

 Score = 32.3 bits (72), Expect = 8.6
 Identities = 26/70 (37%), Positives = 36/70 (51%)
 Frame = +2

Query: 1427 AYWLLQHNLSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATR 1606
            A +L   N+  ++ AC+T  S A+E LR   R    PI   G E  PAV  K AI + T 
Sbjct: 55   AEFLASQNIKALVIACNTATSIAIEDLR---RNFDFPII--GIE--PAV--KPAINKCTE 105

Query: 1607 NKSDVVLVDT 1636
             +  V++V T
Sbjct: 106  ERKRVLVVAT 115


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 324,887,600
Number of extensions: 6593045
Number of successful extensions: 21220
Number of sequences better than 10.0: 115
Number of HSP's gapped: 21040
Number of HSP's successfully gapped: 120
Length of query: 744
Length of database: 100,686,439
Length adjustment: 121
Effective length of query: 623
Effective length of database: 67,496,744
Effective search space: 42050471512
Effective search space used: 42050471512
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

---