No.
Definition
Score (bits)
E Value
1 ref|NM_001063500.1| Oryza sativa (japonica cultivar-group) Os06g...
119
3e-23
2 dbj|AK102979.1| Oryza sativa (japonica cultivar-group) cDNA clon...
119
3e-23
3 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...
92
6e-15
4 dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic D...
92
6e-15
5 ref|NM_001063497.1| Oryza sativa (japonica cultivar-group) Os06g...
70
2e-08
6 ref|NM_001063495.1| Oryza sativa (japonica cultivar-group) Os06g...
70
2e-08
7 dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic D...
70
2e-08
8 dbj|AK241948.1| Oryza sativa (japonica cultivar-group) cDNA, clo...
52
0.005
9 ref|NM_001063498.1| Oryza sativa (japonica cultivar-group) Os06g...
52
0.005
10 ref|NM_001063496.1| Oryza sativa (japonica cultivar-group) Os06g...
52
0.005
11 ref|NM_001063492.1| Oryza sativa (japonica cultivar-group) Os06g...
52
0.005
12 ref|NM_001053220.1| Oryza sativa (japonica cultivar-group) Os02g...
48
0.085
13 gb|AY453412.1| Usutu virus strain SAAR-1776 from South Africa, c...
48
0.085
14 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
48
0.085
15 dbj|AP005651.3| Oryza sativa (japonica cultivar-group) genomic D...
48
0.085
16 dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic D...
48
0.085
17 dbj|AK111474.1| Oryza sativa (japonica cultivar-group) cDNA clon...
48
0.085
18 gb|AF013412.1| Usutu virus strain SAAR-1776 NS5 protein (NS5) ge...
48
0.085
19 ref|XM_001077379.1| PREDICTED: Rattus norvegicus similar to acti...
46
0.34
20 ref|XM_226503.4| PREDICTED: Rattus norvegicus similar to actin m...
46
0.34
21 gb|AC130214.4| Mus musculus BAC clone RP23-245B21 from chromosom...
44
1.3
22 gb|U97006.1| Caenorhabditis elegans cosmid C13F10, complete sequ...
44
1.3
23 ref|NM_072426.3| Caenorhabditis elegans F09G2.1 (F09G2.1) mRNA, ...
44
1.3
24 dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge...
44
1.3
25 gb|AF026215.1| Caenorhabditis elegans cosmid F09G2, complete seq...
44
1.3
26 gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete s...
42
5.3
27 gb|CP000316.1| Polaromonas sp. JS666, complete genome
42
5.3
28 gb|BT016483.1| Zea mays clone Contig316 mRNA sequence
42
5.3
29 gb|AC093198.3| Drosophila melanogaster clone BACR03G24, complete...
42
5.3
30 gb|AC006402.12| Drosophila melanogaster clone BACR08D17, complet...
42
5.3
31 gb|AC093440.2| Drosophila melanogaster clone BACR34H03, complete...
42
5.3
32 ref|XM_754800.1| Ustilago maydis 521 hypothetical protein (UM037...
42
5.3
33 gb|AC102462.19| Mus musculus chromosome 1, clone RP24-327F2, com...
42
5.3
34 gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
42
5.3
35 emb|AL137226.3|CNS01DWI Human chromosome 14 DNA sequence BAC R-3...
42
5.3
36 gb|AC002442.1|AC002442 Drosophila melanogaster DNA sequence (P1 ...
42
5.3
>dbj|AP008212.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
Length = 30731886
Score = 91.7 bits (46), Expect = 6e-15
Identities = 130/158 (82%)
Strand = Plus / Plus
Query: 741 agattcaaccacttccctccgtgcccaagacctgatcttgtcctgggcatcaagcctcac 800
||||||||| ||| | |||| || ||||||||||||||||| | ||| | |||||||||
Sbjct: 3913029 agattcaactactactctccttgtccaagacctgatcttgtgttaggcctgaagcctcac 3913088
Query: 801 gccgatttccctgctctcacggttcttctcatggacaaagacgtggcggggctgcaatat 860
| || || ||||||||| |||||||||| |||||||| || | || |||||| |
Sbjct: 3913089 tctgacctctgtgctctcaccgttcttctcactgacaaagaagtcggtggcctgcaagtt 3913148
Query: 861 cttagagatggaacctggtacaatgttccagctgtgcg 898
|||||||||||||| ||||||| |||||||||||||||
Sbjct: 3913149 cttagagatggaacatggtacagtgttccagctgtgcg 3913186
Score = 69.9 bits (35), Expect = 2e-08
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 452 tgatagacggcaagcatttccaggtagaagggtacgggaatgaccaggtga 502
|||| |||||||||||||||||| |||||||||| || |||||||||||||
Sbjct: 3850556 tgattgacggcaagcatttccagctagaagggtatggaaatgaccaggtga 3850606
Score = 69.9 bits (35), Expect = 2e-08
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 452 tgatagacggcaagcatttccaggtagaagggtacgggaatgaccaggtga 502
|||| |||||||||||||||||| |||||||||| || |||||||||||||
Sbjct: 3888612 tgattgacggcaagcatttccagctagaagggtatggaaatgaccaggtga 3888662
Score = 69.9 bits (35), Expect = 2e-08
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 452 tgatagacggcaagcatttccaggtagaagggtacgggaatgaccaggtga 502
|||| |||||||||||||||||| |||||||||| || |||||||||||||
Sbjct: 3900435 tgattgacggcaagcatttccagctagaagggtatggaaatgaccaggtga 3900485
Score = 54.0 bits (27), Expect = 0.001
Identities = 141/179 (78%)
Strand = Plus / Plus
Query: 427 gaagagaagaagaaatgcagtaacctgatagacggcaagcatttccaggtagaagggtac 486
||||||||||||||| || |||||||| || ||||||| ||| ||| ||||||||||
Sbjct: 3912291 gaagagaagaagaaactgagcaacctgattgatggcaagcgttttcagatagaagggtat 3912350
Query: 487 gggaatgaccaggtgaggactcaagatcagagattggactggtctgatcgactgcacctt 546
|| ||||| | ||| || ||||||||| |||| ||||||||||| ||||| ||
Sbjct: 3912351 ggaaatgatcctgtgcaaaccaaagatcagatcctggattggtctgatcggctgcatctc 3912410
Query: 547 agagttgagccggtgggtgggagaaaccttgcccattggcctacacatcccaaatcttt 605
| |||||||| | | ||| ||||| || ||| |||||| |||||||||||||||||
Sbjct: 3912411 aaggttgagccagagtgtgacagaaatctagccttttggcccacacatcccaaatcttt 3912469
Score = 52.0 bits (26), Expect = 0.005
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 730 ccacttttgctagattcaaccacttccctccgtgcccaagacctgatcttgtcctgggca 789
||||| ||||| |||||||| ||| ||||| ||| ||||| |||||||||||| ||||
Sbjct: 3851033 ccactattgctcgattcaactactaccctcagtgtccaaggcctgatcttgtctatggca 3851092
Query: 790 tcaagcctca 799
| ||||||||
Sbjct: 3851093 tgaagcctca 3851102
Score = 52.0 bits (26), Expect = 0.005
Identities = 80/98 (81%)
Strand = Plus / Plus
Query: 439 aaatgcagtaacctgatagacggcaagcatttccaggtagaagggtacgggaatgaccag 498
|||| ||| ||| |||| ||||||||| | |||||||| |||||||| || | ||||| |
Sbjct: 3855016 aaattcagcaacttgatcgacggcaagaacttccaggtggaagggtatggaactgaccgg 3855075
Query: 499 gtgaggactcaagatcagagattggactggtctgatcg 536
||| || |||||||||| ||||||||||||||||
Sbjct: 3855076 gtggtaacccaagatcagatcctggactggtctgatcg 3855113
Score = 52.0 bits (26), Expect = 0.005
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 730 ccacttttgctagattcaaccacttccctccgtgcccaagacctgatcttgtcctgggca 789
||||| ||||| |||||||| ||| ||||| ||| ||||| |||||||||||| ||||
Sbjct: 3889089 ccactattgctcgattcaactactaccctcagtgtccaaggcctgatcttgtctatggca 3889148
Query: 790 tcaagcctca 799
| ||||||||
Sbjct: 3889149 tgaagcctca 3889158
Score = 52.0 bits (26), Expect = 0.005
Identities = 80/98 (81%)
Strand = Plus / Plus
Query: 439 aaatgcagtaacctgatagacggcaagcatttccaggtagaagggtacgggaatgaccag 498
|||| ||| ||| |||| ||||||||| | |||||||| |||||||| || | ||||| |
Sbjct: 3893004 aaattcagcaacttgatcgacggcaagaacttccaggtggaagggtatggaactgaccgg 3893063
Query: 499 gtgaggactcaagatcagagattggactggtctgatcg 536
||| || |||||||||| ||||||||||||||||
Sbjct: 3893064 gtggtaacccaagatcagatcctggactggtctgatcg 3893101
Score = 52.0 bits (26), Expect = 0.005
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 730 ccacttttgctagattcaaccacttccctccgtgcccaagacctgatcttgtcctgggca 789
||||| ||||| |||||||| ||| ||||| ||| ||||| |||||||||||| ||||
Sbjct: 3900912 ccactattgctcgattcaactactaccctcagtgtccaaggcctgatcttgtctatggca 3900971
Query: 790 tcaagcctca 799
| ||||||||
Sbjct: 3900972 tgaagcctca 3900981
Score = 52.0 bits (26), Expect = 0.005
Identities = 80/98 (81%)
Strand = Plus / Plus
Query: 439 aaatgcagtaacctgatagacggcaagcatttccaggtagaagggtacgggaatgaccag 498
|||| ||| ||| |||| ||||||||| | |||||||| |||||||| || | ||||| |
Sbjct: 3904895 aaattcagcaacttgatcgacggcaagaacttccaggtggaagggtatggaactgaccgg 3904954
Query: 499 gtgaggactcaagatcagagattggactggtctgatcg 536
||| || |||||||||| ||||||||||||||||
Sbjct: 3904955 gtggtaacccaagatcagatcctggactggtctgatcg 3904992
Score = 48.1 bits (24), Expect = 0.085
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 238 gagataccggagcccgtcccaacaatcgatcttggcctgctgtc 281
||||||||||||||| |||| || |||||||| |||| ||||||
Sbjct: 3911514 gagataccggagcccatcccgaccatcgatctcggccggctgtc 3911557
Score = 48.1 bits (24), Expect = 0.085
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 307 gccaagctgcggtcggcgctgcagacctgggg 338
||||||||||||||||| ||||||| ||||||
Sbjct: 3911583 gccaagctgcggtcggctctgcagaactgggg 3911614
Score = 48.1 bits (24), Expect = 0.085
Identities = 72/88 (81%)
Strand = Plus / Plus
Query: 937 agataatgaccaacgggatcttcatggggccgatgcatagagttgtgactaatgccgata 996
||||||||||||| |||| ||||| || || ||||||| || ||||| ||||| || |
Sbjct: 3913481 agataatgaccaatgggaccttcagggctccattgcatagggtggtgacaaatgcagaga 3913540
Query: 997 gagagaggatatcagtggccatgttcta 1024
| ||||| || || ||||||||||||||
Sbjct: 3913541 gggagagaatgtcggtggccatgttcta 3913568
Score = 44.1 bits (22), Expect = 1.3
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 104 caagaactctaatggctgatgagtcatgga 133
||||||| ||||||||||| ||||||||||
Sbjct: 3854597 caagaacactaatggctgacgagtcatgga 3854626
Score = 44.1 bits (22), Expect = 1.3
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 104 caagaactctaatggctgatgagtcatgga 133
||||||| ||||||||||| ||||||||||
Sbjct: 3892653 caagaacactaatggctgacgagtcatgga 3892682
Score = 44.1 bits (22), Expect = 1.3
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 104 caagaactctaatggctgatgagtcatgga 133
||||||| ||||||||||| ||||||||||
Sbjct: 3904476 caagaacactaatggctgacgagtcatgga 3904505
>dbj|AP003019.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0035I03
Length = 153749
Score = 91.7 bits (46), Expect = 6e-15
Identities = 130/158 (82%)
Strand = Plus / Plus
Query: 741 agattcaaccacttccctccgtgcccaagacctgatcttgtcctgggcatcaagcctcac 800
||||||||| ||| | |||| || ||||||||||||||||| | ||| | |||||||||
Sbjct: 18905 agattcaactactactctccttgtccaagacctgatcttgtgttaggcctgaagcctcac 18964
Query: 801 gccgatttccctgctctcacggttcttctcatggacaaagacgtggcggggctgcaatat 860
| || || ||||||||| |||||||||| |||||||| || | || |||||| |
Sbjct: 18965 tctgacctctgtgctctcaccgttcttctcactgacaaagaagtcggtggcctgcaagtt 19024
Query: 861 cttagagatggaacctggtacaatgttccagctgtgcg 898
|||||||||||||| ||||||| |||||||||||||||
Sbjct: 19025 cttagagatggaacatggtacagtgttccagctgtgcg 19062
Score = 69.9 bits (35), Expect = 2e-08
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 452 tgatagacggcaagcatttccaggtagaagggtacgggaatgaccaggtga 502
|||| |||||||||||||||||| |||||||||| || |||||||||||||
Sbjct: 6311 tgattgacggcaagcatttccagctagaagggtatggaaatgaccaggtga 6361
Score = 54.0 bits (27), Expect = 0.001
Identities = 141/179 (78%)
Strand = Plus / Plus
Query: 427 gaagagaagaagaaatgcagtaacctgatagacggcaagcatttccaggtagaagggtac 486
||||||||||||||| || |||||||| || ||||||| ||| ||| ||||||||||
Sbjct: 18167 gaagagaagaagaaactgagcaacctgattgatggcaagcgttttcagatagaagggtat 18226
Query: 487 gggaatgaccaggtgaggactcaagatcagagattggactggtctgatcgactgcacctt 546
|| ||||| | ||| || ||||||||| |||| ||||||||||| ||||| ||
Sbjct: 18227 ggaaatgatcctgtgcaaaccaaagatcagatcctggattggtctgatcggctgcatctc 18286
Query: 547 agagttgagccggtgggtgggagaaaccttgcccattggcctacacatcccaaatcttt 605
| |||||||| | | ||| ||||| || ||| |||||| |||||||||||||||||
Sbjct: 18287 aaggttgagccagagtgtgacagaaatctagccttttggcccacacatcccaaatcttt 18345
Score = 52.0 bits (26), Expect = 0.005
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 730 ccacttttgctagattcaaccacttccctccgtgcccaagacctgatcttgtcctgggca 789
||||| ||||| |||||||| ||| ||||| ||| ||||| |||||||||||| ||||
Sbjct: 6788 ccactattgctcgattcaactactaccctcagtgtccaaggcctgatcttgtctatggca 6847
Query: 790 tcaagcctca 799
| ||||||||
Sbjct: 6848 tgaagcctca 6857
Score = 52.0 bits (26), Expect = 0.005
Identities = 80/98 (81%)
Strand = Plus / Plus
Query: 439 aaatgcagtaacctgatagacggcaagcatttccaggtagaagggtacgggaatgaccag 498
|||| ||| ||| |||| ||||||||| | |||||||| |||||||| || | ||||| |
Sbjct: 10771 aaattcagcaacttgatcgacggcaagaacttccaggtggaagggtatggaactgaccgg 10830
Query: 499 gtgaggactcaagatcagagattggactggtctgatcg 536
||| || |||||||||| ||||||||||||||||
Sbjct: 10831 gtggtaacccaagatcagatcctggactggtctgatcg 10868
Score = 48.1 bits (24), Expect = 0.085
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 238 gagataccggagcccgtcccaacaatcgatcttggcctgctgtc 281
||||||||||||||| |||| || |||||||| |||| ||||||
Sbjct: 17390 gagataccggagcccatcccgaccatcgatctcggccggctgtc 17433
Score = 48.1 bits (24), Expect = 0.085
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 307 gccaagctgcggtcggcgctgcagacctgggg 338
||||||||||||||||| ||||||| ||||||
Sbjct: 17459 gccaagctgcggtcggctctgcagaactgggg 17490
Score = 48.1 bits (24), Expect = 0.085
Identities = 72/88 (81%)
Strand = Plus / Plus
Query: 937 agataatgaccaacgggatcttcatggggccgatgcatagagttgtgactaatgccgata 996
||||||||||||| |||| ||||| || || ||||||| || ||||| ||||| || |
Sbjct: 19357 agataatgaccaatgggaccttcagggctccattgcatagggtggtgacaaatgcagaga 19416
Query: 997 gagagaggatatcagtggccatgttcta 1024
| ||||| || || ||||||||||||||
Sbjct: 19417 gggagagaatgtcggtggccatgttcta 19444
Score = 44.1 bits (22), Expect = 1.3
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 104 caagaactctaatggctgatgagtcatgga 133
||||||| ||||||||||| ||||||||||
Sbjct: 10352 caagaacactaatggctgacgagtcatgga 10381
>dbj|AP002069.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0015E04
Length = 152046
Score = 69.9 bits (35), Expect = 2e-08
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 452 tgatagacggcaagcatttccaggtagaagggtacgggaatgaccaggtga 502
|||| |||||||||||||||||| |||||||||| || |||||||||||||
Sbjct: 108510 tgattgacggcaagcatttccagctagaagggtatggaaatgaccaggtga 108560
Score = 69.9 bits (35), Expect = 2e-08
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 452 tgatagacggcaagcatttccaggtagaagggtacgggaatgaccaggtga 502
|||| |||||||||||||||||| |||||||||| || |||||||||||||
Sbjct: 146566 tgattgacggcaagcatttccagctagaagggtatggaaatgaccaggtga 146616
Score = 52.0 bits (26), Expect = 0.005
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 730 ccacttttgctagattcaaccacttccctccgtgcccaagacctgatcttgtcctgggca 789
||||| ||||| |||||||| ||| ||||| ||| ||||| |||||||||||| ||||
Sbjct: 108987 ccactattgctcgattcaactactaccctcagtgtccaaggcctgatcttgtctatggca 109046
Query: 790 tcaagcctca 799
| ||||||||
Sbjct: 109047 tgaagcctca 109056
Score = 52.0 bits (26), Expect = 0.005
Identities = 80/98 (81%)
Strand = Plus / Plus
Query: 439 aaatgcagtaacctgatagacggcaagcatttccaggtagaagggtacgggaatgaccag 498
|||| ||| ||| |||| ||||||||| | |||||||| |||||||| || | ||||| |
Sbjct: 112970 aaattcagcaacttgatcgacggcaagaacttccaggtggaagggtatggaactgaccgg 113029
Query: 499 gtgaggactcaagatcagagattggactggtctgatcg 536
||| || |||||||||| ||||||||||||||||
Sbjct: 113030 gtggtaacccaagatcagatcctggactggtctgatcg 113067
Score = 52.0 bits (26), Expect = 0.005
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 730 ccacttttgctagattcaaccacttccctccgtgcccaagacctgatcttgtcctgggca 789
||||| ||||| |||||||| ||| ||||| ||| ||||| |||||||||||| ||||
Sbjct: 147043 ccactattgctcgattcaactactaccctcagtgtccaaggcctgatcttgtctatggca 147102
Query: 790 tcaagcctca 799
| ||||||||
Sbjct: 147103 tgaagcctca 147112
Score = 52.0 bits (26), Expect = 0.005
Identities = 80/98 (81%)
Strand = Plus / Plus
Query: 439 aaatgcagtaacctgatagacggcaagcatttccaggtagaagggtacgggaatgaccag 498
|||| ||| ||| |||| ||||||||| | |||||||| |||||||| || | ||||| |
Sbjct: 151026 aaattcagcaacttgatcgacggcaagaacttccaggtggaagggtatggaactgaccgg 151085
Query: 499 gtgaggactcaagatcagagattggactggtctgatcg 536
||| || |||||||||| ||||||||||||||||
Sbjct: 151086 gtggtaacccaagatcagatcctggactggtctgatcg 151123
Score = 44.1 bits (22), Expect = 1.3
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 104 caagaactctaatggctgatgagtcatgga 133
||||||| ||||||||||| ||||||||||
Sbjct: 112551 caagaacactaatggctgacgagtcatgga 112580
Score = 44.1 bits (22), Expect = 1.3
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 104 caagaactctaatggctgatgagtcatgga 133
||||||| ||||||||||| ||||||||||
Sbjct: 150607 caagaacactaatggctgacgagtcatgga 150636
>gb|AC002442.1 |AC002442 Drosophila melanogaster DNA sequence (P1 DS08416 (D52)), complete
sequence
Length = 79323
Score = 42.1 bits (21), Expect = 5.3
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1209 gctaaagtacacacatggaaagtaa 1233
|||||||||||||||| ||||||||
Sbjct: 8410 gctaaagtacacacatcgaaagtaa 8386
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 239,899,668
Number of extensions: 12016132
Number of successful extensions: 226334
Number of sequences better than 10.0: 36
Number of HSP's gapped: 226326
Number of HSP's successfully gapped: 91
Length of query: 1387
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1364
Effective length of database: 18,503,978,556
Effective search space: 25239426750384
Effective search space used: 25239426750384
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)