Clone Name | FLbaf9n08 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AK105372:Os07g0545100 | 110 | 1e-24 | 2 | AK100145:Os01g0692600 | 33 | 0.22 | 3 | Os05g0353500:Os05g0353500 | 32 | 0.65 | 4 | AK066532:Os04g0661700 | 30 | 2.4 | 5 | AK109998: | 29 | 3.2 | 6 | AK111310:Os12g0271700 | 29 | 3.2 | 7 | AK105119:Os10g0567600 | 29 | 3.2 | 8 | AK111228: | 29 | 4.2 | 9 | AK110022: | 29 | 4.2 | 10 | AK101247:Os09g0441900 | 25 | 5.3 | 11 | AK072242:Os10g0447900 | 28 | 5.5 | 12 | AK107644: | 28 | 7.1 | 13 | AK105557:Os11g0229100 | 28 | 7.1 | 14 | AK060806:Os07g0685700 | 28 | 7.1 | 15 | AB074972:Os07g0685700 | 28 | 7.1 | 16 | Os11g0598500:Os11g0598500 | 28 | 9.3 | 17 | AK110201: | 28 | 9.3 | 18 | AK108081:Os01g0754300 | 28 | 9.3 | 19 | AK067017:Os01g0254800 | 28 | 9.3 | 20 | Os12g0456400:Os12g0456400 | 28 | 9.4 |
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>AK105372:Os07g0545100 | Length = 166 Score = 110 bits (275), Expect = 1e-24 Identities = 50/86 (58%), Positives = 62/86 (72%) Frame = +1 Query: 265 CSCGQARRSSPNRQMASFALVLTWMXXXXXXXXXXXXXXPNSKKSMAECGLVRHRFLSIG 444 C+C + RR++PNRQMASFALV++W+ PN+++ A+C L RH FLSIG Sbjct: 77 CACSRDRRATPNRQMASFALVISWIVLVVGLALLILGALPNAERKAAKCSLPRHHFLSIG 136 Query: 445 GILCFVHAVFCLVYYVSANAAAREEG 522 GILCFVH +FCLVYY SANAA REEG Sbjct: 137 GILCFVHGLFCLVYYASANAAKREEG 162 Score = 49.7 bits (117), Expect = 2e-06 Identities = 23/26 (88%), Positives = 24/26 (92%) Frame = +3 Query: 159 CLLIVAMDVAAGVLGIHAEKAQSQGR 236 CLLI+AMDV AGVLGIHAEKAQ QGR Sbjct: 10 CLLIIAMDVVAGVLGIHAEKAQHQGR 35
>AK100145:Os01g0692600 | Length = 614 Score = 33.1 bits (74), Expect = 0.22 Identities = 18/46 (39%), Positives = 22/46 (47%) Frame = -3 Query: 418 PARTPPLTSWNWAAHRGSAAPAPPVEPSM*GPGRMTPSAGWATSAG 281 PA PP +A++R S P PP +PS P R SA A G Sbjct: 39 PAPPPPPRVRAFASYRASPPPPPPPQPSSPSPSRALASAAAACEQG 84
>Os05g0353500:Os05g0353500 | Length = 525 Score = 31.6 bits (70), Expect = 0.65 Identities = 17/60 (28%), Positives = 33/60 (55%) Frame = +1 Query: 478 LVYYVSANAAAREEGRGSGSKPAGVYT*WISTTSRHASTFTSDRLLLPTLFRKIPPLRDW 657 L++ ++++++++ + S+ AG W ST+S ++ F LP L PPL+DW Sbjct: 35 LIHAKKSSSSSQQQQQQQRSRQAGSKAGWPSTSSTPSNPFG-----LPMLLPPPPPLKDW 89
>AK066532:Os04g0661700 | Length = 948 Score = 29.6 bits (65), Expect = 2.4 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Frame = -3 Query: 418 PARTPPLTSWN-WAAHRGSAAPAPPVEPSM*GPGRMTPSAGWATS---AGPGRRSSRAT 254 P + P L + N W H +A P PP P PG+ + WA S AG G AT Sbjct: 87 PMQPPLLAAGNPWPPHHAAAQPPPPSYPPP-PPGQGWANHSWAQSHGYAGHGNEEDWAT 144
>AK109998: | Length = 774 Score = 29.3 bits (64), Expect = 3.2 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = +2 Query: 539 SPPACIPDGSLR-PVAMHQPLLQTACCCLHCSGKFLRCEIGCDCALCVHV 685 SP A P + R P H P CL+C L C++G C C+++ Sbjct: 212 SPSAEEPSPAARKPAKAHVP-----SACLNCKRAHLACDVGRPCRRCINL 256
>AK111310:Os12g0271700 | Length = 136 Score = 29.3 bits (64), Expect = 3.2 Identities = 15/52 (28%), Positives = 22/52 (42%) Frame = -3 Query: 400 LTSWNWAAHRGSAAPAPPVEPSM*GPGRMTPSAGWATSAGPGRRSSRATCSI 245 L S + + R +AA +P + P P GW A P R + CS+ Sbjct: 7 LASSSHLSRRATAAASPSIPPPSPPPPPQRLRCGWVGRAAPPTRRAPGVCSV 58
>AK105119:Os10g0567600 | Length = 292 Score = 29.3 bits (64), Expect = 3.2 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 12/64 (18%) Frame = -3 Query: 415 ARTPPLTSWNW------------AAHRGSAAPAPPVEPSM*GPGRMTPSAGWATSAGPGR 272 A+ PP S +W AA + + PP++ + PG T S+ W S P R Sbjct: 154 AKDPPRRSTSWLSSIVRRKRRPEAAATAAESLPPPLDEAPDSPGGSTTSSWWFPSPSPAR 213 Query: 271 RSSR 260 + R Sbjct: 214 QHRR 217
>AK111228: | Length = 764 Score = 28.9 bits (63), Expect = 4.2 Identities = 21/77 (27%), Positives = 28/77 (36%), Gaps = 5/77 (6%) Frame = +2 Query: 509 RGRKAVGLGPSP---PACIPDGSLRPVAMHQPLLQTA--CCCLHCSGKFLRCEIGCDCAL 673 R R + G P P P P A P L T C HC + + E+ C+ Sbjct: 314 RHRSSSNQGTPPITSPPTFPRSITDPAATTTPALHTEPQVSCKHCGREHIEHELHYHCSK 373 Query: 674 CVHVITDVVPSCCRAAQ 724 C D+ C RA + Sbjct: 374 CDDGTYDMCHRCYRAGK 390
>AK110022: | Length = 895 Score = 28.9 bits (63), Expect = 4.2 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%) Frame = -3 Query: 370 GSAAPAPPVEPSM*G--PGRMTPSAGWATSAGPGRRSSRAT 254 G +APA P EP G P R GW + G S RA+ Sbjct: 625 GDSAPATPTEPDSDGYEPPRANLLHGWLSEGGSATSSRRAS 665
>AK101247:Os09g0441900 | Length = 444 Score = 25.0 bits (53), Expect(2) = 5.3 Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 3/35 (8%) Frame = +1 Query: 667 CFVCACNYG---CCAIVLPSCPVILFPLLLCSING 762 CF CN CC LPSC C NG Sbjct: 229 CFKSQCNCSSPNCCTCTLPSCSCKGCACPSCGCNG 263 Score = 21.9 bits (45), Expect(2) = 5.3 Identities = 8/23 (34%), Positives = 11/23 (47%) Frame = +2 Query: 608 ACCCLHCSGKFLRCEIGCDCALC 676 +CC +CS C CD + C Sbjct: 182 SCCKPNCSCSCPSCSSCCDTSCC 204
>AK072242:Os10g0447900 | Length = 515 Score = 28.5 bits (62), Expect = 5.5 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 3/83 (3%) Frame = -3 Query: 418 PARTPPLTSWNWAAHRGSAAPAPPVEPSM*GPG---RMTPSAGWATSAGPGRRSSRATCS 248 PA + P +S W A R ++ + S P R PSA TS+ P R +SR+ S Sbjct: 70 PASSSPSSSSRWRA-RTTSRRSRSSSRSRRAPTSGRRRRPSATRRTSSSPSRAASRSASS 128 Query: 247 IFRCLPWL*AFSAWIPRTPAATS 179 C + S+ P + +ATS Sbjct: 129 SSACSRRWSSASSPTPASSSATS 151
>AK107644: | Length = 464 Score = 28.1 bits (61), Expect = 7.1 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = -2 Query: 380 SAPRISSASPTSRTIHVRTRANDAICRLGDERRAWPQEQQGHVQ 249 +A +AS S IH+ R + + R G+E W EQ+ +Q Sbjct: 35 TAKAAGAASKRSAPIHIPIRKREMVKRSGNELLDWANEQKAILQ 78
>AK105557:Os11g0229100 | Length = 164 Score = 28.1 bits (61), Expect = 7.1 Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 6/90 (6%) Frame = -3 Query: 415 ARTPPLTSWNWAAHRGSAAPAPPVEPSM*GPGRMTPSAGWATSA----GPGRRS--SRAT 254 A +P T+ + A SA + P +P G + S+GWATSA G RRS S T Sbjct: 75 ATSPSETATSGVASGRSAVISSPSDPR--SAGSESASSGWATSARRLRGDWRRSAASSPT 132 Query: 253 CSIFRCLPWL*AFSAWIPRTPAATSMATMR 164 + W S P +P A + ++ R Sbjct: 133 TTAGEGRTWSTPTSRPPPTSPRAPTCSSWR 162
>AK060806:Os07g0685700 | Length = 593 Score = 28.1 bits (61), Expect = 7.1 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Frame = +3 Query: 273 RPGPALVAQ-PADGVIRPGPHMDGSTGGAGAADPRCAAQFQEVNGG 407 R GPA +A+ AD + P DG GGA A P + Q+ G Sbjct: 187 RNGPAAIAKYQADNAV---PGCDGDAGGAAPAGPHSLHELQDTTLG 229
>AB074972:Os07g0685700 | Length = 593 Score = 28.1 bits (61), Expect = 7.1 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Frame = +3 Query: 273 RPGPALVAQ-PADGVIRPGPHMDGSTGGAGAADPRCAAQFQEVNGG 407 R GPA +A+ AD + P DG GGA A P + Q+ G Sbjct: 187 RNGPAAIAKYQADNAV---PGCDGDAGGAAPAGPHSLHELQDTTLG 229
>Os11g0598500:Os11g0598500 | Length = 1290 Score = 27.7 bits (60), Expect = 9.3 Identities = 18/65 (27%), Positives = 32/65 (49%) Frame = -2 Query: 344 RTIHVRTRANDAICRLGDERRAWPQEQQGHVQYLQVPPLALSFLRVDPEDAGGHVHGDDE 165 R + + RA +C+L D R + + + ++VP + P+ GG+ GDDE Sbjct: 109 RKMVAQHRAAIQLCQLKDRARDVGERRMRYG--VEVPATTKA---AAPDAEGGYAAGDDE 163 Query: 164 EADDH 150 + +DH Sbjct: 164 DYEDH 168
>AK110201: | Length = 1029 Score = 27.7 bits (60), Expect = 9.3 Identities = 18/50 (36%), Positives = 24/50 (48%) Frame = -3 Query: 415 ARTPPLTSWNWAAHRGSAAPAPPVEPSM*GPGRMTPSAGWATSAGPGRRS 266 +RTP LTS A G AA +PP+ P TPS + P +R+ Sbjct: 887 SRTPSLTSSAAFAQAGKAAASPPLPPK-------TPSKPSLLTRSPRQRA 929
>AK108081:Os01g0754300 | Length = 145 Score = 27.7 bits (60), Expect = 9.3 Identities = 15/52 (28%), Positives = 19/52 (36%) Frame = -3 Query: 319 RMTPSAGWATSAGPGRRSSRATCSIFRCLPWL*AFSAWIPRTPAATSMATMR 164 R S GW+ RS RC W SAW P+ + S + R Sbjct: 7 RWRTSMGWSLGNPGAARSCALARRSTRCSRWFRTLSAWNPKVAPSQSKMSAR 58
>AK067017:Os01g0254800 | Length = 250 Score = 27.7 bits (60), Expect = 9.3 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = -2 Query: 458 KQRIPPMERKRCRTSPHSAIDFLELGSAPRISSASPTSR 342 + R+PP+ R+R R H + L L R+++ P R Sbjct: 58 RPRLPPLRRRRIRRRRHPRLPPLRLRRIRRLAATDPRRR 96
>Os12g0456400:Os12g0456400 | Length = 1142 Score = 27.7 bits (60), Expect = 9.4 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = +1 Query: 496 ANAAAREEGRGSGSKPAGVYT*WISTTSRHASTFTSDRLLLPTLFRKIPP 645 A+AA R G G G G W S ++ LLLP++FRK PP Sbjct: 138 ASAATRLGGGGGGGGSGG----WFSRLVASGAS-----LLLPSVFRKPPP 178 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 24,569,197 Number of extensions: 606225 Number of successful extensions: 2572 Number of sequences better than 10.0: 20 Number of HSP's gapped: 2569 Number of HSP's successfully gapped: 22 Length of query: 262 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 163 Effective length of database: 11,435,796 Effective search space: 1864034748 Effective search space used: 1864034748 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)