ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf9n08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK105372:Os07g0545100 110 1e-24
2AK100145:Os01g0692600 33 0.22
3Os05g0353500:Os05g0353500 32 0.65
4AK066532:Os04g0661700 30 2.4
5AK109998: 29 3.2
6AK111310:Os12g0271700 29 3.2
7AK105119:Os10g0567600 29 3.2
8AK111228: 29 4.2
9AK110022: 29 4.2
10AK101247:Os09g0441900 25 5.3
11AK072242:Os10g0447900 28 5.5
12AK107644: 28 7.1
13AK105557:Os11g0229100 28 7.1
14AK060806:Os07g0685700 28 7.1
15AB074972:Os07g0685700 28 7.1
16Os11g0598500:Os11g0598500 28 9.3
17AK110201: 28 9.3
18AK108081:Os01g0754300 28 9.3
19AK067017:Os01g0254800 28 9.3
20Os12g0456400:Os12g0456400 28 9.4

>AK105372:Os07g0545100 |
          Length = 166
 Score =  110 bits (275), Expect = 1e-24
 Identities = 50/86 (58%), Positives = 62/86 (72%)
 Frame = +1

Query: 265 CSCGQARRSSPNRQMASFALVLTWMXXXXXXXXXXXXXXPNSKKSMAECGLVRHRFLSIG 444
           C+C + RR++PNRQMASFALV++W+              PN+++  A+C L RH FLSIG
Sbjct: 77  CACSRDRRATPNRQMASFALVISWIVLVVGLALLILGALPNAERKAAKCSLPRHHFLSIG 136

Query: 445 GILCFVHAVFCLVYYVSANAAAREEG 522
           GILCFVH +FCLVYY SANAA REEG
Sbjct: 137 GILCFVHGLFCLVYYASANAAKREEG 162



 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 23/26 (88%), Positives = 24/26 (92%)
 Frame = +3

Query: 159 CLLIVAMDVAAGVLGIHAEKAQSQGR 236
           CLLI+AMDV AGVLGIHAEKAQ QGR
Sbjct: 10  CLLIIAMDVVAGVLGIHAEKAQHQGR 35



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>AK100145:Os01g0692600 |
          Length = 614

 Score = 33.1 bits (74), Expect = 0.22
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = -3

Query: 418 PARTPPLTSWNWAAHRGSAAPAPPVEPSM*GPGRMTPSAGWATSAG 281
           PA  PP     +A++R S  P PP +PS   P R   SA  A   G
Sbjct: 39  PAPPPPPRVRAFASYRASPPPPPPPQPSSPSPSRALASAAAACEQG 84



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>Os05g0353500:Os05g0353500 |
          Length = 525

 Score = 31.6 bits (70), Expect = 0.65
 Identities = 17/60 (28%), Positives = 33/60 (55%)
 Frame = +1

Query: 478 LVYYVSANAAAREEGRGSGSKPAGVYT*WISTTSRHASTFTSDRLLLPTLFRKIPPLRDW 657
           L++   ++++++++ +   S+ AG    W ST+S  ++ F      LP L    PPL+DW
Sbjct: 35  LIHAKKSSSSSQQQQQQQRSRQAGSKAGWPSTSSTPSNPFG-----LPMLLPPPPPLKDW 89



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>AK066532:Os04g0661700 |
          Length = 948

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
 Frame = -3

Query: 418 PARTPPLTSWN-WAAHRGSAAPAPPVEPSM*GPGRMTPSAGWATS---AGPGRRSSRAT 254
           P + P L + N W  H  +A P PP  P    PG+   +  WA S   AG G     AT
Sbjct: 87  PMQPPLLAAGNPWPPHHAAAQPPPPSYPPP-PPGQGWANHSWAQSHGYAGHGNEEDWAT 144



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>AK109998: |
          Length = 774

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +2

Query: 539 SPPACIPDGSLR-PVAMHQPLLQTACCCLHCSGKFLRCEIGCDCALCVHV 685
           SP A  P  + R P   H P       CL+C    L C++G  C  C+++
Sbjct: 212 SPSAEEPSPAARKPAKAHVP-----SACLNCKRAHLACDVGRPCRRCINL 256



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>AK111310:Os12g0271700 |
          Length = 136

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = -3

Query: 400 LTSWNWAAHRGSAAPAPPVEPSM*GPGRMTPSAGWATSAGPGRRSSRATCSI 245
           L S +  + R +AA +P + P    P       GW   A P  R +   CS+
Sbjct: 7   LASSSHLSRRATAAASPSIPPPSPPPPPQRLRCGWVGRAAPPTRRAPGVCSV 58



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>AK105119:Os10g0567600 |
          Length = 292

 Score = 29.3 bits (64), Expect = 3.2
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 12/64 (18%)
 Frame = -3

Query: 415 ARTPPLTSWNW------------AAHRGSAAPAPPVEPSM*GPGRMTPSAGWATSAGPGR 272
           A+ PP  S +W            AA   + +  PP++ +   PG  T S+ W  S  P R
Sbjct: 154 AKDPPRRSTSWLSSIVRRKRRPEAAATAAESLPPPLDEAPDSPGGSTTSSWWFPSPSPAR 213

Query: 271 RSSR 260
           +  R
Sbjct: 214 QHRR 217



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>AK111228: |
          Length = 764

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 21/77 (27%), Positives = 28/77 (36%), Gaps = 5/77 (6%)
 Frame = +2

Query: 509 RGRKAVGLGPSP---PACIPDGSLRPVAMHQPLLQTA--CCCLHCSGKFLRCEIGCDCAL 673
           R R +   G  P   P   P     P A   P L T     C HC  + +  E+   C+ 
Sbjct: 314 RHRSSSNQGTPPITSPPTFPRSITDPAATTTPALHTEPQVSCKHCGREHIEHELHYHCSK 373

Query: 674 CVHVITDVVPSCCRAAQ 724
           C     D+   C RA +
Sbjct: 374 CDDGTYDMCHRCYRAGK 390



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>AK110022: |
          Length = 895

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
 Frame = -3

Query: 370 GSAAPAPPVEPSM*G--PGRMTPSAGWATSAGPGRRSSRAT 254
           G +APA P EP   G  P R     GW +  G    S RA+
Sbjct: 625 GDSAPATPTEPDSDGYEPPRANLLHGWLSEGGSATSSRRAS 665



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>AK101247:Os09g0441900 |
          Length = 444

 Score = 25.0 bits (53), Expect(2) = 5.3
 Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 3/35 (8%)
 Frame = +1

Query: 667 CFVCACNYG---CCAIVLPSCPVILFPLLLCSING 762
           CF   CN     CC   LPSC         C  NG
Sbjct: 229 CFKSQCNCSSPNCCTCTLPSCSCKGCACPSCGCNG 263



 Score = 21.9 bits (45), Expect(2) = 5.3
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 608 ACCCLHCSGKFLRCEIGCDCALC 676
           +CC  +CS     C   CD + C
Sbjct: 182 SCCKPNCSCSCPSCSSCCDTSCC 204



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>AK072242:Os10g0447900 |
          Length = 515

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
 Frame = -3

Query: 418 PARTPPLTSWNWAAHRGSAAPAPPVEPSM*GPG---RMTPSAGWATSAGPGRRSSRATCS 248
           PA + P +S  W A R ++  +     S   P    R  PSA   TS+ P R +SR+  S
Sbjct: 70  PASSSPSSSSRWRA-RTTSRRSRSSSRSRRAPTSGRRRRPSATRRTSSSPSRAASRSASS 128

Query: 247 IFRCLPWL*AFSAWIPRTPAATS 179
              C     + S+  P + +ATS
Sbjct: 129 SSACSRRWSSASSPTPASSSATS 151



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>AK107644: |
          Length = 464

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -2

Query: 380 SAPRISSASPTSRTIHVRTRANDAICRLGDERRAWPQEQQGHVQ 249
           +A    +AS  S  IH+  R  + + R G+E   W  EQ+  +Q
Sbjct: 35  TAKAAGAASKRSAPIHIPIRKREMVKRSGNELLDWANEQKAILQ 78



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>AK105557:Os11g0229100 |
          Length = 164

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
 Frame = -3

Query: 415 ARTPPLTSWNWAAHRGSAAPAPPVEPSM*GPGRMTPSAGWATSA----GPGRRS--SRAT 254
           A +P  T+ +  A   SA  + P +P     G  + S+GWATSA    G  RRS  S  T
Sbjct: 75  ATSPSETATSGVASGRSAVISSPSDPR--SAGSESASSGWATSARRLRGDWRRSAASSPT 132

Query: 253 CSIFRCLPWL*AFSAWIPRTPAATSMATMR 164
            +      W    S   P +P A + ++ R
Sbjct: 133 TTAGEGRTWSTPTSRPPPTSPRAPTCSSWR 162



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>AK060806:Os07g0685700 |
          Length = 593

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 273 RPGPALVAQ-PADGVIRPGPHMDGSTGGAGAADPRCAAQFQEVNGG 407
           R GPA +A+  AD  +   P  DG  GGA  A P    + Q+   G
Sbjct: 187 RNGPAAIAKYQADNAV---PGCDGDAGGAAPAGPHSLHELQDTTLG 229



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>AB074972:Os07g0685700 |
          Length = 593

 Score = 28.1 bits (61), Expect = 7.1
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 273 RPGPALVAQ-PADGVIRPGPHMDGSTGGAGAADPRCAAQFQEVNGG 407
           R GPA +A+  AD  +   P  DG  GGA  A P    + Q+   G
Sbjct: 187 RNGPAAIAKYQADNAV---PGCDGDAGGAAPAGPHSLHELQDTTLG 229



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>Os11g0598500:Os11g0598500 |
          Length = 1290

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 18/65 (27%), Positives = 32/65 (49%)
 Frame = -2

Query: 344 RTIHVRTRANDAICRLGDERRAWPQEQQGHVQYLQVPPLALSFLRVDPEDAGGHVHGDDE 165
           R +  + RA   +C+L D  R   + +  +   ++VP    +     P+  GG+  GDDE
Sbjct: 109 RKMVAQHRAAIQLCQLKDRARDVGERRMRYG--VEVPATTKA---AAPDAEGGYAAGDDE 163

Query: 164 EADDH 150
           + +DH
Sbjct: 164 DYEDH 168



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>AK110201: |
          Length = 1029

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -3

Query: 415  ARTPPLTSWNWAAHRGSAAPAPPVEPSM*GPGRMTPSAGWATSAGPGRRS 266
            +RTP LTS    A  G AA +PP+ P        TPS     +  P +R+
Sbjct: 887  SRTPSLTSSAAFAQAGKAAASPPLPPK-------TPSKPSLLTRSPRQRA 929



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>AK108081:Os01g0754300 |
          Length = 145

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 15/52 (28%), Positives = 19/52 (36%)
 Frame = -3

Query: 319 RMTPSAGWATSAGPGRRSSRATCSIFRCLPWL*AFSAWIPRTPAATSMATMR 164
           R   S GW+       RS        RC  W    SAW P+   + S  + R
Sbjct: 7   RWRTSMGWSLGNPGAARSCALARRSTRCSRWFRTLSAWNPKVAPSQSKMSAR 58



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>AK067017:Os01g0254800 |
          Length = 250

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -2

Query: 458 KQRIPPMERKRCRTSPHSAIDFLELGSAPRISSASPTSR 342
           + R+PP+ R+R R   H  +  L L    R+++  P  R
Sbjct: 58  RPRLPPLRRRRIRRRRHPRLPPLRLRRIRRLAATDPRRR 96



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>Os12g0456400:Os12g0456400 |
          Length = 1142

 Score = 27.7 bits (60), Expect = 9.4
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = +1

Query: 496 ANAAAREEGRGSGSKPAGVYT*WISTTSRHASTFTSDRLLLPTLFRKIPP 645
           A+AA R  G G G    G    W S      ++     LLLP++FRK PP
Sbjct: 138 ASAATRLGGGGGGGGSGG----WFSRLVASGAS-----LLLPSVFRKPPP 178


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 24,569,197
Number of extensions: 606225
Number of successful extensions: 2572
Number of sequences better than 10.0: 20
Number of HSP's gapped: 2569
Number of HSP's successfully gapped: 22
Length of query: 262
Length of database: 15,399,855
Length adjustment: 99
Effective length of query: 163
Effective length of database: 11,435,796
Effective search space: 1864034748
Effective search space used: 1864034748
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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