ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf96n01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT828506.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA120F16, full insert sequence Length = 1068 Score = 500 bits (252), Expect = e-138 Identities = 405/456 (88%) Strand = Plus / Plus Query: 281 ggcatcaaagaacatgtgactctcggcccaaagttgtacgagaccgtgaggggcaagctg 340 ||||||||||||||||||||||| || ||||| ||||||||||| ||| ||||||||| Sbjct: 297 ggcatcaaagaacatgtgactctaggaccaaaactgtacgagaccatgaaaggcaagctg 356 Query: 341 tcgctgggcgcaaggatcatccaggccggcggcgtggagaaagtcttccggcggtggttc 400 |||||||||| || ||| ||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 357 acgctgggcgcgagaatcctccaggcaggcggcgtggagaaggtcttccgccggtggttc 416 Query: 401 gccgtggagaagggcgagaagctcctcaaggcctcgcagtgctacctgtccaccaccgcc 460 ||||| | ||||||||||||||||| | |||||| |||||||||||||||||||| ||| Sbjct: 417 gccgtcggcaagggcgagaagctcctgagggcctcccagtgctacctgtccaccacggcc 476 Query: 461 ggaccgatcgccggagtgctcttcgtatcgtcggagagggtggccttccgcagcgaccgg 520 || ||||||||||| |||||||| ||||| |||||||| | || ||||| ||||||||| Sbjct: 477 ggcccgatcgccggcatgctcttcatatcgacggagaggatcgcgttccggagcgaccgg 536 Query: 521 tcgctggagctgacctcgcccaagggcgacacggtgcgtgtgccgtacaaggtggccgtc 580 ||||||| ||||||| | || | ||||||||||||||||||||||||||||||||| || Sbjct: 537 tcgctggcgctgaccaccccgagcggcgacacggtgcgtgtgccgtacaaggtggccatc 596 Query: 581 ccgctgaggagggtgaaggcggccaggccgagcgagaaccagcaccggccggagcagaag 640 || ||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 597 cctctgaggagggtgaagacggccaagccgagcgagaacaagcaccggccggagcagaag 656 Query: 641 tacgtccagctggtgaccgacgacggcttcgagttctggttcatgggcttcgtcagctac 700 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 657 tacgtccaggtggtgaccgacgacggcttcgagttctggttcatgggattcgtcagcttc 716 Query: 701 caggcgtccctgcagcacctcgagcaggccatcgcg 736 |||| | ||||| || |||| |||| |||| ||||| Sbjct: 717 caggtgaccctgaagaacctggagctggccgtcgcg 752 Score = 61.9 bits (31), Expect = 4e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 879 tggtggattgcttgtcgtttttggcattggagcaactccggta 921 |||||||||||||| |||||||||| ||||||||| ||||||| Sbjct: 881 tggtggattgcttggcgtttttggctttggagcaagtccggta 923 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 158 gagcatgtgatcggcatcccggtcagcagcactgctatcggcatcgaggagccgga 213 |||||||||||||| ||||| || |||| || ||| ||||||||||||||||||| Sbjct: 138 gagcatgtgatcgggatcccagtgagcaacagggctttcggcatcgaggagccgga 193 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1004 gccacggcaaaagtgccatcata 1026 ||||||||||||||||||||||| Sbjct: 983 gccacggcaaaagtgccatcata 1005
>ref|NM_001059900.1| Oryza sativa (japonica cultivar-group) Os04g0527000 (Os04g0527000) mRNA, complete cds Length = 1071 Score = 500 bits (252), Expect = e-138 Identities = 405/456 (88%) Strand = Plus / Plus Query: 281 ggcatcaaagaacatgtgactctcggcccaaagttgtacgagaccgtgaggggcaagctg 340 ||||||||||||||||||||||| || ||||| ||||||||||| ||| ||||||||| Sbjct: 298 ggcatcaaagaacatgtgactctaggaccaaaactgtacgagaccatgaaaggcaagctg 357 Query: 341 tcgctgggcgcaaggatcatccaggccggcggcgtggagaaagtcttccggcggtggttc 400 |||||||||| || ||| ||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 358 acgctgggcgcgagaatcctccaggcaggcggcgtggagaaggtcttccgccggtggttc 417 Query: 401 gccgtggagaagggcgagaagctcctcaaggcctcgcagtgctacctgtccaccaccgcc 460 ||||| | ||||||||||||||||| | |||||| |||||||||||||||||||| ||| Sbjct: 418 gccgtcggcaagggcgagaagctcctgagggcctcccagtgctacctgtccaccacggcc 477 Query: 461 ggaccgatcgccggagtgctcttcgtatcgtcggagagggtggccttccgcagcgaccgg 520 || ||||||||||| |||||||| ||||| |||||||| | || ||||| ||||||||| Sbjct: 478 ggcccgatcgccggcatgctcttcatatcgacggagaggatcgcgttccggagcgaccgg 537 Query: 521 tcgctggagctgacctcgcccaagggcgacacggtgcgtgtgccgtacaaggtggccgtc 580 ||||||| ||||||| | || | ||||||||||||||||||||||||||||||||| || Sbjct: 538 tcgctggcgctgaccaccccgagcggcgacacggtgcgtgtgccgtacaaggtggccatc 597 Query: 581 ccgctgaggagggtgaaggcggccaggccgagcgagaaccagcaccggccggagcagaag 640 || ||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 598 cctctgaggagggtgaagacggccaagccgagcgagaacaagcaccggccggagcagaag 657 Query: 641 tacgtccagctggtgaccgacgacggcttcgagttctggttcatgggcttcgtcagctac 700 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 658 tacgtccaggtggtgaccgacgacggcttcgagttctggttcatgggattcgtcagcttc 717 Query: 701 caggcgtccctgcagcacctcgagcaggccatcgcg 736 |||| | ||||| || |||| |||| |||| ||||| Sbjct: 718 caggtgaccctgaagaacctggagctggccgtcgcg 753 Score = 61.9 bits (31), Expect = 4e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 879 tggtggattgcttgtcgtttttggcattggagcaactccggta 921 |||||||||||||| |||||||||| ||||||||| ||||||| Sbjct: 882 tggtggattgcttggcgtttttggctttggagcaagtccggta 924 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 158 gagcatgtgatcggcatcccggtcagcagcactgctatcggcatcgaggagccgga 213 |||||||||||||| ||||| || |||| || ||| ||||||||||||||||||| Sbjct: 139 gagcatgtgatcgggatcccagtgagcaacagggctttcggcatcgaggagccgga 194 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1004 gccacggcaaaagtgccatcata 1026 ||||||||||||||||||||||| Sbjct: 984 gccacggcaaaagtgccatcata 1006
>dbj|AK104433.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-C06, full insert sequence Length = 1054 Score = 500 bits (252), Expect = e-138 Identities = 405/456 (88%) Strand = Plus / Plus Query: 281 ggcatcaaagaacatgtgactctcggcccaaagttgtacgagaccgtgaggggcaagctg 340 ||||||||||||||||||||||| || ||||| ||||||||||| ||| ||||||||| Sbjct: 298 ggcatcaaagaacatgtgactctaggaccaaaactgtacgagaccatgaaaggcaagctg 357 Query: 341 tcgctgggcgcaaggatcatccaggccggcggcgtggagaaagtcttccggcggtggttc 400 |||||||||| || ||| ||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 358 acgctgggcgcgagaatcctccaggcaggcggcgtggagaaggtcttccgccggtggttc 417 Query: 401 gccgtggagaagggcgagaagctcctcaaggcctcgcagtgctacctgtccaccaccgcc 460 ||||| | ||||||||||||||||| | |||||| |||||||||||||||||||| ||| Sbjct: 418 gccgtcggcaagggcgagaagctcctgagggcctcccagtgctacctgtccaccacggcc 477 Query: 461 ggaccgatcgccggagtgctcttcgtatcgtcggagagggtggccttccgcagcgaccgg 520 || ||||||||||| |||||||| ||||| |||||||| | || ||||| ||||||||| Sbjct: 478 ggcccgatcgccggcatgctcttcatatcgacggagaggatcgcgttccggagcgaccgg 537 Query: 521 tcgctggagctgacctcgcccaagggcgacacggtgcgtgtgccgtacaaggtggccgtc 580 ||||||| ||||||| | || | ||||||||||||||||||||||||||||||||| || Sbjct: 538 tcgctggcgctgaccaccccgagcggcgacacggtgcgtgtgccgtacaaggtggccatc 597 Query: 581 ccgctgaggagggtgaaggcggccaggccgagcgagaaccagcaccggccggagcagaag 640 || ||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 598 cctctgaggagggtgaagacggccaagccgagcgagaacaagcaccggccggagcagaag 657 Query: 641 tacgtccagctggtgaccgacgacggcttcgagttctggttcatgggcttcgtcagctac 700 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 658 tacgtccaggtggtgaccgacgacggcttcgagttctggttcatgggattcgtcagcttc 717 Query: 701 caggcgtccctgcagcacctcgagcaggccatcgcg 736 |||| | ||||| || |||| |||| |||| ||||| Sbjct: 718 caggtgaccctgaagaacctggagctggccgtcgcg 753 Score = 61.9 bits (31), Expect = 4e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 879 tggtggattgcttgtcgtttttggcattggagcaactccggta 921 |||||||||||||| |||||||||| ||||||||| ||||||| Sbjct: 882 tggtggattgcttggcgtttttggctttggagcaagtccggta 924 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 158 gagcatgtgatcggcatcccggtcagcagcactgctatcggcatcgaggagccgga 213 |||||||||||||| ||||| || |||| || ||| ||||||||||||||||||| Sbjct: 139 gagcatgtgatcgggatcccagtgagcaacagggctttcggcatcgaggagccgga 194 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1004 gccacggcaaaagtgccatcata 1026 ||||||||||||||||||||||| Sbjct: 984 gccacggcaaaagtgccatcata 1006
>dbj|AK099545.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033A11, full insert sequence Length = 1073 Score = 500 bits (252), Expect = e-138 Identities = 405/456 (88%) Strand = Plus / Plus Query: 281 ggcatcaaagaacatgtgactctcggcccaaagttgtacgagaccgtgaggggcaagctg 340 ||||||||||||||||||||||| || ||||| ||||||||||| ||| ||||||||| Sbjct: 299 ggcatcaaagaacatgtgactctaggaccaaaactgtacgagaccatgaaaggcaagctg 358 Query: 341 tcgctgggcgcaaggatcatccaggccggcggcgtggagaaagtcttccggcggtggttc 400 |||||||||| || ||| ||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 359 acgctgggcgcgagaatcctccaggcaggcggcgtggagaaggtcttccgccggtggttc 418 Query: 401 gccgtggagaagggcgagaagctcctcaaggcctcgcagtgctacctgtccaccaccgcc 460 ||||| | ||||||||||||||||| | |||||| |||||||||||||||||||| ||| Sbjct: 419 gccgtcggcaagggcgagaagctcctgagggcctcccagtgctacctgtccaccacggcc 478 Query: 461 ggaccgatcgccggagtgctcttcgtatcgtcggagagggtggccttccgcagcgaccgg 520 || ||||||||||| |||||||| ||||| |||||||| | || ||||| ||||||||| Sbjct: 479 ggcccgatcgccggcatgctcttcatatcgacggagaggatcgcgttccggagcgaccgg 538 Query: 521 tcgctggagctgacctcgcccaagggcgacacggtgcgtgtgccgtacaaggtggccgtc 580 ||||||| ||||||| | || | ||||||||||||||||||||||||||||||||| || Sbjct: 539 tcgctggcgctgaccaccccgagcggcgacacggtgcgtgtgccgtacaaggtggccatc 598 Query: 581 ccgctgaggagggtgaaggcggccaggccgagcgagaaccagcaccggccggagcagaag 640 || ||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 599 cctctgaggagggtgaagacggccaagccgagcgagaacaagcaccggccggagcagaag 658 Query: 641 tacgtccagctggtgaccgacgacggcttcgagttctggttcatgggcttcgtcagctac 700 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 659 tacgtccaggtggtgaccgacgacggcttcgagttctggttcatgggattcgtcagcttc 718 Query: 701 caggcgtccctgcagcacctcgagcaggccatcgcg 736 |||| | ||||| || |||| |||| |||| ||||| Sbjct: 719 caggtgaccctgaagaacctggagctggccgtcgcg 754 Score = 61.9 bits (31), Expect = 4e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 879 tggtggattgcttgtcgtttttggcattggagcaactccggta 921 |||||||||||||| |||||||||| ||||||||| ||||||| Sbjct: 883 tggtggattgcttggcgtttttggctttggagcaagtccggta 925 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 158 gagcatgtgatcggcatcccggtcagcagcactgctatcggcatcgaggagccgga 213 |||||||||||||| ||||| || |||| || ||| ||||||||||||||||||| Sbjct: 140 gagcatgtgatcgggatcccagtgagcaacagggctttcggcatcgaggagccgga 195 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1004 gccacggcaaaagtgccatcata 1026 ||||||||||||||||||||||| Sbjct: 985 gccacggcaaaagtgccatcata 1007
>dbj|AK070324.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023051E03, full insert sequence Length = 1057 Score = 500 bits (252), Expect = e-138 Identities = 405/456 (88%) Strand = Plus / Plus Query: 281 ggcatcaaagaacatgtgactctcggcccaaagttgtacgagaccgtgaggggcaagctg 340 ||||||||||||||||||||||| || ||||| ||||||||||| ||| ||||||||| Sbjct: 298 ggcatcaaagaacatgtgactctaggaccaaaactgtacgagaccatgaaaggcaagctg 357 Query: 341 tcgctgggcgcaaggatcatccaggccggcggcgtggagaaagtcttccggcggtggttc 400 |||||||||| || ||| ||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 358 acgctgggcgcgagaatcctccaggcaggcggcgtggagaaggtcttccgccggtggttc 417 Query: 401 gccgtggagaagggcgagaagctcctcaaggcctcgcagtgctacctgtccaccaccgcc 460 ||||| | ||||||||||||||||| | |||||| |||||||||||||||||||| ||| Sbjct: 418 gccgtcggcaagggcgagaagctcctgagggcctcccagtgctacctgtccaccacggcc 477 Query: 461 ggaccgatcgccggagtgctcttcgtatcgtcggagagggtggccttccgcagcgaccgg 520 || ||||||||||| |||||||| ||||| |||||||| | || ||||| ||||||||| Sbjct: 478 ggcccgatcgccggcatgctcttcatatcgacggagaggatcgcgttccggagcgaccgg 537 Query: 521 tcgctggagctgacctcgcccaagggcgacacggtgcgtgtgccgtacaaggtggccgtc 580 ||||||| ||||||| | || | ||||||||||||||||||||||||||||||||| || Sbjct: 538 tcgctggcgctgaccaccccgagcggcgacacggtgcgtgtgccgtacaaggtggccatc 597 Query: 581 ccgctgaggagggtgaaggcggccaggccgagcgagaaccagcaccggccggagcagaag 640 || ||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 598 cctctgaggagggtgaagacggccaagccgagcgagaacaagcaccggccggagcagaag 657 Query: 641 tacgtccagctggtgaccgacgacggcttcgagttctggttcatgggcttcgtcagctac 700 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 658 tacgtccaggtggtgaccgacgacggcttcgagttctggttcatgggattcgtcagcttc 717 Query: 701 caggcgtccctgcagcacctcgagcaggccatcgcg 736 |||| | ||||| || |||| |||| |||| ||||| Sbjct: 718 caggtgaccctgaagaacctggagctggccgtcgcg 753 Score = 61.9 bits (31), Expect = 4e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 879 tggtggattgcttgtcgtttttggcattggagcaactccggta 921 |||||||||||||| |||||||||| ||||||||| ||||||| Sbjct: 882 tggtggattgcttggcgtttttggctttggagcaagtccggta 924 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 158 gagcatgtgatcggcatcccggtcagcagcactgctatcggcatcgaggagccgga 213 |||||||||||||| ||||| || |||| || ||| ||||||||||||||||||| Sbjct: 139 gagcatgtgatcgggatcccagtgagcaacagggctttcggcatcgaggagccgga 194 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1004 gccacggcaaaagtgccatcata 1026 ||||||||||||||||||||||| Sbjct: 984 gccacggcaaaagtgccatcata 1006
>emb|CR855230.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0115K01-H0319F09, complete sequence Length = 189580 Score = 470 bits (237), Expect = e-129 Identities = 390/441 (88%) Strand = Plus / Minus Query: 296 gtgactctcggcccaaagttgtacgagaccgtgaggggcaagctgtcgctgggcgcaagg 355 |||||||| || ||||| ||||||||||| ||| ||||||||| |||||||||| || Sbjct: 58271 gtgactctaggaccaaaactgtacgagaccatgaaaggcaagctgacgctgggcgcgaga 58212 Query: 356 atcatccaggccggcggcgtggagaaagtcttccggcggtggttcgccgtggagaagggc 415 ||| ||||||| |||||||||||||| |||||||| |||||||||||||| | |||||| Sbjct: 58211 atcctccaggcaggcggcgtggagaaggtcttccgccggtggttcgccgtcggcaagggc 58152 Query: 416 gagaagctcctcaaggcctcgcagtgctacctgtccaccaccgccggaccgatcgccgga 475 ||||||||||| | |||||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 58151 gagaagctcctgagggcctcccagtgctacctgtccaccacggccggcccgatcgccggc 58092 Query: 476 gtgctcttcgtatcgtcggagagggtggccttccgcagcgaccggtcgctggagctgacc 535 |||||||| ||||| |||||||| | || ||||| |||||||||||||||| ||||||| Sbjct: 58091 atgctcttcatatcgacggagaggatcgcgttccggagcgaccggtcgctggcgctgacc 58032 Query: 536 tcgcccaagggcgacacggtgcgtgtgccgtacaaggtggccgtcccgctgaggagggtg 595 | || | ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 58031 accccgagcggcgacacggtgcgtgtgccgtacaaggtggccatccctctgaggagggtg 57972 Query: 596 aaggcggccaggccgagcgagaaccagcaccggccggagcagaagtacgtccagctggtg 655 ||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 57971 aagacggccaagccgagcgagaacaagcaccggccggagcagaagtacgtccaggtggtg 57912 Query: 656 accgacgacggcttcgagttctggttcatgggcttcgtcagctaccaggcgtccctgcag 715 |||||||||||||||||||||||||||||||| |||||||||| ||||| | ||||| || Sbjct: 57911 accgacgacggcttcgagttctggttcatgggattcgtcagcttccaggtgaccctgaag 57852 Query: 716 cacctcgagcaggccatcgcg 736 |||| |||| |||| ||||| Sbjct: 57851 aacctggagctggccgtcgcg 57831 Score = 73.8 bits (37), Expect = 1e-09 Identities = 127/157 (80%) Strand = Plus / Minus Query: 436 gcagtgctacctgtccaccaccgccggaccgatcgccggagtgctcttcgtatcgtcgga 495 |||||||||||||| |||||||| ||| || |||||||| |||||||||| || | | Sbjct: 53241 gcagtgctacctgtacaccaccggcgggcccatcgccgggatgctcttcgtctccaccaa 53182 Query: 496 gagggtggccttccgcagcgaccggtcgctggagctgacctcgcccaagggcgacacggt 555 || ||| |||||||||||||||||| || | | | |||||| ||||||||||| | Sbjct: 53181 gaaggtcgccttccgcagcgaccggccggtcacggtcacctcggccaagggcgacgtcgc 53122 Query: 556 gcgtgtgccgtacaaggtggccgtcccgctgaggagg 592 ||| ||||| |||||||||| |||||||| |||||| Sbjct: 53121 gcgggtgccctacaaggtggtggtcccgctcaggagg 53085 Score = 67.9 bits (34), Expect = 7e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 662 gacggcttcgagttctggttcatgggcttcgtcagctaccag 703 |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 53015 gacggcttcgagttctggttcatggggttcgtgagctaccag 52974 Score = 61.9 bits (31), Expect = 4e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 879 tggtggattgcttgtcgtttttggcattggagcaactccggta 921 |||||||||||||| |||||||||| ||||||||| ||||||| Sbjct: 57702 tggtggattgcttggcgtttttggctttggagcaagtccggta 57660 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 158 gagcatgtgatcggcatcccggtcagcagcactgctatcggcatcgaggagccgga 213 |||||||||||||| ||||| || |||| || ||| ||||||||||||||||||| Sbjct: 58563 gagcatgtgatcgggatcccagtgagcaacagggctttcggcatcgaggagccgga 58508 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1004 gccacggcaaaagtgccatcata 1026 ||||||||||||||||||||||| Sbjct: 57600 gccacggcaaaagtgccatcata 57578
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 470 bits (237), Expect = e-129 Identities = 390/441 (88%) Strand = Plus / Minus Query: 296 gtgactctcggcccaaagttgtacgagaccgtgaggggcaagctgtcgctgggcgcaagg 355 |||||||| || ||||| ||||||||||| ||| ||||||||| |||||||||| || Sbjct: 26321511 gtgactctaggaccaaaactgtacgagaccatgaaaggcaagctgacgctgggcgcgaga 26321452 Query: 356 atcatccaggccggcggcgtggagaaagtcttccggcggtggttcgccgtggagaagggc 415 ||| ||||||| |||||||||||||| |||||||| |||||||||||||| | |||||| Sbjct: 26321451 atcctccaggcaggcggcgtggagaaggtcttccgccggtggttcgccgtcggcaagggc 26321392 Query: 416 gagaagctcctcaaggcctcgcagtgctacctgtccaccaccgccggaccgatcgccgga 475 ||||||||||| | |||||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 26321391 gagaagctcctgagggcctcccagtgctacctgtccaccacggccggcccgatcgccggc 26321332 Query: 476 gtgctcttcgtatcgtcggagagggtggccttccgcagcgaccggtcgctggagctgacc 535 |||||||| ||||| |||||||| | || ||||| |||||||||||||||| ||||||| Sbjct: 26321331 atgctcttcatatcgacggagaggatcgcgttccggagcgaccggtcgctggcgctgacc 26321272 Query: 536 tcgcccaagggcgacacggtgcgtgtgccgtacaaggtggccgtcccgctgaggagggtg 595 | || | ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 26321271 accccgagcggcgacacggtgcgtgtgccgtacaaggtggccatccctctgaggagggtg 26321212 Query: 596 aaggcggccaggccgagcgagaaccagcaccggccggagcagaagtacgtccagctggtg 655 ||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 26321211 aagacggccaagccgagcgagaacaagcaccggccggagcagaagtacgtccaggtggtg 26321152 Query: 656 accgacgacggcttcgagttctggttcatgggcttcgtcagctaccaggcgtccctgcag 715 |||||||||||||||||||||||||||||||| |||||||||| ||||| | ||||| || Sbjct: 26321151 accgacgacggcttcgagttctggttcatgggattcgtcagcttccaggtgaccctgaag 26321092 Query: 716 cacctcgagcaggccatcgcg 736 |||| |||| |||| ||||| Sbjct: 26321091 aacctggagctggccgtcgcg 26321071 Score = 73.8 bits (37), Expect = 1e-09 Identities = 127/157 (80%) Strand = Plus / Minus Query: 436 gcagtgctacctgtccaccaccgccggaccgatcgccggagtgctcttcgtatcgtcgga 495 |||||||||||||| |||||||| ||| || |||||||| |||||||||| || | | Sbjct: 26316481 gcagtgctacctgtacaccaccggcgggcccatcgccgggatgctcttcgtctccaccaa 26316422 Query: 496 gagggtggccttccgcagcgaccggtcgctggagctgacctcgcccaagggcgacacggt 555 || ||| |||||||||||||||||| || | | | |||||| ||||||||||| | Sbjct: 26316421 gaaggtcgccttccgcagcgaccggccggtcacggtcacctcggccaagggcgacgtcgc 26316362 Query: 556 gcgtgtgccgtacaaggtggccgtcccgctgaggagg 592 ||| ||||| |||||||||| |||||||| |||||| Sbjct: 26316361 gcgggtgccctacaaggtggtggtcccgctcaggagg 26316325 Score = 67.9 bits (34), Expect = 7e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 662 gacggcttcgagttctggttcatgggcttcgtcagctaccag 703 |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 26316255 gacggcttcgagttctggttcatggggttcgtgagctaccag 26316214 Score = 61.9 bits (31), Expect = 4e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 879 tggtggattgcttgtcgtttttggcattggagcaactccggta 921 |||||||||||||| |||||||||| ||||||||| ||||||| Sbjct: 26320942 tggtggattgcttggcgtttttggctttggagcaagtccggta 26320900 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 158 gagcatgtgatcggcatcccggtcagcagcactgctatcggcatcgaggagccgga 213 |||||||||||||| ||||| || |||| || ||| ||||||||||||||||||| Sbjct: 26321803 gagcatgtgatcgggatcccagtgagcaacagggctttcggcatcgaggagccgga 26321748 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1004 gccacggcaaaagtgccatcata 1026 ||||||||||||||||||||||| Sbjct: 26320840 gccacggcaaaagtgccatcata 26320818
>emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10, complete sequence Length = 141545 Score = 470 bits (237), Expect = e-129 Identities = 390/441 (88%) Strand = Plus / Minus Query: 296 gtgactctcggcccaaagttgtacgagaccgtgaggggcaagctgtcgctgggcgcaagg 355 |||||||| || ||||| ||||||||||| ||| ||||||||| |||||||||| || Sbjct: 98088 gtgactctaggaccaaaactgtacgagaccatgaaaggcaagctgacgctgggcgcgaga 98029 Query: 356 atcatccaggccggcggcgtggagaaagtcttccggcggtggttcgccgtggagaagggc 415 ||| ||||||| |||||||||||||| |||||||| |||||||||||||| | |||||| Sbjct: 98028 atcctccaggcaggcggcgtggagaaggtcttccgccggtggttcgccgtcggcaagggc 97969 Query: 416 gagaagctcctcaaggcctcgcagtgctacctgtccaccaccgccggaccgatcgccgga 475 ||||||||||| | |||||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 97968 gagaagctcctgagggcctcccagtgctacctgtccaccacggccggcccgatcgccggc 97909 Query: 476 gtgctcttcgtatcgtcggagagggtggccttccgcagcgaccggtcgctggagctgacc 535 |||||||| ||||| |||||||| | || ||||| |||||||||||||||| ||||||| Sbjct: 97908 atgctcttcatatcgacggagaggatcgcgttccggagcgaccggtcgctggcgctgacc 97849 Query: 536 tcgcccaagggcgacacggtgcgtgtgccgtacaaggtggccgtcccgctgaggagggtg 595 | || | ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 97848 accccgagcggcgacacggtgcgtgtgccgtacaaggtggccatccctctgaggagggtg 97789 Query: 596 aaggcggccaggccgagcgagaaccagcaccggccggagcagaagtacgtccagctggtg 655 ||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 97788 aagacggccaagccgagcgagaacaagcaccggccggagcagaagtacgtccaggtggtg 97729 Query: 656 accgacgacggcttcgagttctggttcatgggcttcgtcagctaccaggcgtccctgcag 715 |||||||||||||||||||||||||||||||| |||||||||| ||||| | ||||| || Sbjct: 97728 accgacgacggcttcgagttctggttcatgggattcgtcagcttccaggtgaccctgaag 97669 Query: 716 cacctcgagcaggccatcgcg 736 |||| |||| |||| ||||| Sbjct: 97668 aacctggagctggccgtcgcg 97648 Score = 73.8 bits (37), Expect = 1e-09 Identities = 127/157 (80%) Strand = Plus / Minus Query: 436 gcagtgctacctgtccaccaccgccggaccgatcgccggagtgctcttcgtatcgtcgga 495 |||||||||||||| |||||||| ||| || |||||||| |||||||||| || | | Sbjct: 93058 gcagtgctacctgtacaccaccggcgggcccatcgccgggatgctcttcgtctccaccaa 92999 Query: 496 gagggtggccttccgcagcgaccggtcgctggagctgacctcgcccaagggcgacacggt 555 || ||| |||||||||||||||||| || | | | |||||| ||||||||||| | Sbjct: 92998 gaaggtcgccttccgcagcgaccggccggtcacggtcacctcggccaagggcgacgtcgc 92939 Query: 556 gcgtgtgccgtacaaggtggccgtcccgctgaggagg 592 ||| ||||| |||||||||| |||||||| |||||| Sbjct: 92938 gcgggtgccctacaaggtggtggtcccgctcaggagg 92902 Score = 67.9 bits (34), Expect = 7e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 662 gacggcttcgagttctggttcatgggcttcgtcagctaccag 703 |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 92832 gacggcttcgagttctggttcatggggttcgtgagctaccag 92791 Score = 61.9 bits (31), Expect = 4e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 879 tggtggattgcttgtcgtttttggcattggagcaactccggta 921 |||||||||||||| |||||||||| ||||||||| ||||||| Sbjct: 97519 tggtggattgcttggcgtttttggctttggagcaagtccggta 97477 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 158 gagcatgtgatcggcatcccggtcagcagcactgctatcggcatcgaggagccgga 213 |||||||||||||| ||||| || |||| || ||| ||||||||||||||||||| Sbjct: 98380 gagcatgtgatcgggatcccagtgagcaacagggctttcggcatcgaggagccgga 98325 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1004 gccacggcaaaagtgccatcata 1026 ||||||||||||||||||||||| Sbjct: 97417 gccacggcaaaagtgccatcata 97395
>ref|NM_001054060.1| Oryza sativa (japonica cultivar-group) Os02g0636700 (Os02g0636700) mRNA, complete cds Length = 1157 Score = 303 bits (153), Expect = 7e-79 Identities = 381/457 (83%) Strand = Plus / Plus Query: 280 gggcatcaaagaacatgtgactctcggcccaaagttgtacgagaccgtgaggggcaagct 339 ||||||||||||||||||||| ||||| || ||| | | || || || | ||| ||||| Sbjct: 336 gggcatcaaagaacatgtgaccctcgggccgaagctatcggaaacggtcaaggggaagct 395 Query: 340 gtcgctgggcgcaaggatcatccaggccggcggcgtggagaaagtcttccggcggtggtt 399 |||||||||| ||||| |||||||||||||||||||||| || ||||||| |||||| Sbjct: 396 cacgctgggcgcccggatcctccaggccggcggcgtggagaaggtgttccggcagtggtt 455 Query: 400 cgccgtggagaagggcgagaagctcctcaaggcctcgcagtgctacctgtccaccaccgc 459 | ||||||| ||| ||||||||| |||| ||| ||||||||||||||||| || || || Sbjct: 456 ctccgtggacaagaacgagaagctgctcagggcgtcgcagtgctacctgtcgacgacggc 515 Query: 460 cggaccgatcgccggagtgctcttcgtatcgtcggagagggtggccttccgcagcgaccg 519 ||| ||||||||||| |||| ||||| ||| ||||| |||| || |||||||||||||| Sbjct: 516 cgggccgatcgccggcatgctgttcgtgtcgacggagcgggtcgcgttccgcagcgaccg 575 Query: 520 gtcgctggagctgacctcgcccaagggcgacacggtgcgtgtgccgtacaaggtggccgt 579 | |||||| | || || | || ||||||| |||||| || |||||||||||| || | Sbjct: 576 gccgctggcggtgtccgccccgggcggcgacaaggtgcgcgtcccgtacaaggtgaccat 635 Query: 580 cccgctgaggagggtgaaggcggccaggccgagcgagaaccagcaccggccggagcagaa 639 ||||||| ||| ||||||||| |||| ||||||||||||| ||||| ||| |||||||| Sbjct: 636 cccgctgcggaaggtgaaggccgccaagccgagcgagaacaagcacaagcccgagcagaa 695 Query: 640 gtacgtccagctggtgaccgacgacggcttcgagttctggttcatgggcttcgtcagcta 699 |||| || || | || ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 696 gtacatcgaggtcgtcaccaacgacggcttcgagttctggttcatgggcttcgtcagcta 755 Query: 700 ccaggcgtccctgcagcacctcgagcaggccatcgcg 736 ||| || ||||| ||||| ||||||||| ||||| Sbjct: 756 ccaccgctcgctgcaccacctggagcaggccgtcgcg 792
>dbj|AK069779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031H22, full insert sequence Length = 1157 Score = 303 bits (153), Expect = 7e-79 Identities = 381/457 (83%) Strand = Plus / Plus Query: 280 gggcatcaaagaacatgtgactctcggcccaaagttgtacgagaccgtgaggggcaagct 339 ||||||||||||||||||||| ||||| || ||| | | || || || | ||| ||||| Sbjct: 336 gggcatcaaagaacatgtgaccctcgggccgaagctatcggaaacggtcaaggggaagct 395 Query: 340 gtcgctgggcgcaaggatcatccaggccggcggcgtggagaaagtcttccggcggtggtt 399 |||||||||| ||||| |||||||||||||||||||||| || ||||||| |||||| Sbjct: 396 cacgctgggcgcccggatcctccaggccggcggcgtggagaaggtgttccggcagtggtt 455 Query: 400 cgccgtggagaagggcgagaagctcctcaaggcctcgcagtgctacctgtccaccaccgc 459 | ||||||| ||| ||||||||| |||| ||| ||||||||||||||||| || || || Sbjct: 456 ctccgtggacaagaacgagaagctgctcagggcgtcgcagtgctacctgtcgacgacggc 515 Query: 460 cggaccgatcgccggagtgctcttcgtatcgtcggagagggtggccttccgcagcgaccg 519 ||| ||||||||||| |||| ||||| ||| ||||| |||| || |||||||||||||| Sbjct: 516 cgggccgatcgccggcatgctgttcgtgtcgacggagcgggtcgcattccgcagcgaccg 575 Query: 520 gtcgctggagctgacctcgcccaagggcgacacggtgcgtgtgccgtacaaggtggccgt 579 | |||||| | || || | || ||||||| |||||| || |||||||||||| || | Sbjct: 576 gccgctggcggtgtccgccccgggcggcgacaaggtgcgcgtcccgtacaaggtgaccat 635 Query: 580 cccgctgaggagggtgaaggcggccaggccgagcgagaaccagcaccggccggagcagaa 639 ||||||| ||| ||||||||| |||| ||||||||||||| ||||| ||| |||||||| Sbjct: 636 cccgctgcggaaggtgaaggccgccaagccgagcgagaacaagcacaagcccgagcagaa 695 Query: 640 gtacgtccagctggtgaccgacgacggcttcgagttctggttcatgggcttcgtcagcta 699 |||| || || | || ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 696 gtacatcgaggtcgtcaccaacgacggcttcgagttctggttcatgggcttcgtcagcta 755 Query: 700 ccaggcgtccctgcagcacctcgagcaggccatcgcg 736 ||| || ||||| ||||| ||||||||| ||||| Sbjct: 756 ccaccgctcgctgcaccacctggagcaggccgtcgcg 792
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 291 bits (147), Expect = 3e-75 Identities = 333/395 (84%) Strand = Plus / Minus Query: 342 cgctgggcgcaaggatcatccaggccggcggcgtggagaaagtcttccggcggtggttcg 401 |||||||||| ||||| |||||||||||||||||||||| || ||||||| ||||||| Sbjct: 25546954 cgctgggcgcccggatcctccaggccggcggcgtggagaaggtgttccggcagtggttct 25546895 Query: 402 ccgtggagaagggcgagaagctcctcaaggcctcgcagtgctacctgtccaccaccgccg 461 ||||||| ||| ||||||||| |||| ||| ||||||||||||||||| || || |||| Sbjct: 25546894 ccgtggacaagaacgagaagctgctcagggcgtcgcagtgctacctgtcgacgacggccg 25546835 Query: 462 gaccgatcgccggagtgctcttcgtatcgtcggagagggtggccttccgcagcgaccggt 521 | ||||||||||| |||| ||||| ||| ||||| |||| || ||||||||||||||| Sbjct: 25546834 ggccgatcgccggcatgctgttcgtgtcgacggagcgggtcgcgttccgcagcgaccggc 25546775 Query: 522 cgctggagctgacctcgcccaagggcgacacggtgcgtgtgccgtacaaggtggccgtcc 581 |||||| | || || | || ||||||| |||||| || |||||||||||| || ||| Sbjct: 25546774 cgctggcggtgtccgccccgggcggcgacaaggtgcgcgtcccgtacaaggtgaccatcc 25546715 Query: 582 cgctgaggagggtgaaggcggccaggccgagcgagaaccagcaccggccggagcagaagt 641 ||||| ||| ||||||||| |||| ||||||||||||| ||||| ||| |||||||||| Sbjct: 25546714 cgctgcggaaggtgaaggccgccaagccgagcgagaacaagcacaagcccgagcagaagt 25546655 Query: 642 acgtccagctggtgaccgacgacggcttcgagttctggttcatgggcttcgtcagctacc 701 || || || | || ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 25546654 acatcgaggtcgtcaccaacgacggcttcgagttctggttcatgggcttcgtcagctacc 25546595 Query: 702 aggcgtccctgcagcacctcgagcaggccatcgcg 736 | || ||||| ||||| ||||||||| ||||| Sbjct: 25546594 accgctcgctgcaccacctggagcaggccgtcgcg 25546560 Score = 71.9 bits (36), Expect = 5e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 628 gccggagcagaagtacgtccagctggtgaccgacgacggcttcgagttctggttcatggg 687 |||||||||||||||| | || ||| |||| |||||| |||||||||||||||||||| Sbjct: 25542076 gccggagcagaagtacatacacgtggccaccgtcgacgggttcgagttctggttcatggg 25542017 Query: 688 cttcgtcagctaccag 703 ||||| ||||||||| Sbjct: 25542016 attcgtgagctaccag 25542001 Score = 56.0 bits (28), Expect = 3e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 320 gagaccgtgaggggcaagctgtcgctgggcgcaaggatcatccaggccggcggcgtggag 379 ||||| |||||||| |||||| |||||||| |||||| | |||||||||||||||||| Sbjct: 25542387 gagacggtgagggggaagctgagcctgggcgcgaggatcctgcaggccggcggcgtggag 25542328
>dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014E22 Length = 157627 Score = 291 bits (147), Expect = 3e-75 Identities = 333/395 (84%) Strand = Plus / Minus Query: 342 cgctgggcgcaaggatcatccaggccggcggcgtggagaaagtcttccggcggtggttcg 401 |||||||||| ||||| |||||||||||||||||||||| || ||||||| ||||||| Sbjct: 17001 cgctgggcgcccggatcctccaggccggcggcgtggagaaggtgttccggcagtggttct 16942 Query: 402 ccgtggagaagggcgagaagctcctcaaggcctcgcagtgctacctgtccaccaccgccg 461 ||||||| ||| ||||||||| |||| ||| ||||||||||||||||| || || |||| Sbjct: 16941 ccgtggacaagaacgagaagctgctcagggcgtcgcagtgctacctgtcgacgacggccg 16882 Query: 462 gaccgatcgccggagtgctcttcgtatcgtcggagagggtggccttccgcagcgaccggt 521 | ||||||||||| |||| ||||| ||| ||||| |||| || ||||||||||||||| Sbjct: 16881 ggccgatcgccggcatgctgttcgtgtcgacggagcgggtcgcgttccgcagcgaccggc 16822 Query: 522 cgctggagctgacctcgcccaagggcgacacggtgcgtgtgccgtacaaggtggccgtcc 581 |||||| | || || | || ||||||| |||||| || |||||||||||| || ||| Sbjct: 16821 cgctggcggtgtccgccccgggcggcgacaaggtgcgcgtcccgtacaaggtgaccatcc 16762 Query: 582 cgctgaggagggtgaaggcggccaggccgagcgagaaccagcaccggccggagcagaagt 641 ||||| ||| ||||||||| |||| ||||||||||||| ||||| ||| |||||||||| Sbjct: 16761 cgctgcggaaggtgaaggccgccaagccgagcgagaacaagcacaagcccgagcagaagt 16702 Query: 642 acgtccagctggtgaccgacgacggcttcgagttctggttcatgggcttcgtcagctacc 701 || || || | || ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 16701 acatcgaggtcgtcaccaacgacggcttcgagttctggttcatgggcttcgtcagctacc 16642 Query: 702 aggcgtccctgcagcacctcgagcaggccatcgcg 736 | || ||||| ||||| ||||||||| ||||| Sbjct: 16641 accgctcgctgcaccacctggagcaggccgtcgcg 16607 Score = 71.9 bits (36), Expect = 5e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 628 gccggagcagaagtacgtccagctggtgaccgacgacggcttcgagttctggttcatggg 687 |||||||||||||||| | || ||| |||| |||||| |||||||||||||||||||| Sbjct: 12123 gccggagcagaagtacatacacgtggccaccgtcgacgggttcgagttctggttcatggg 12064 Query: 688 cttcgtcagctaccag 703 ||||| ||||||||| Sbjct: 12063 attcgtgagctaccag 12048 Score = 56.0 bits (28), Expect = 3e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 320 gagaccgtgaggggcaagctgtcgctgggcgcaaggatcatccaggccggcggcgtggag 379 ||||| |||||||| |||||| |||||||| |||||| | |||||||||||||||||| Sbjct: 12434 gagacggtgagggggaagctgagcctgggcgcgaggatcctgcaggccggcggcgtggag 12375
>dbj|AP004067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1581_H09 Length = 86699 Score = 291 bits (147), Expect = 3e-75 Identities = 333/395 (84%) Strand = Plus / Minus Query: 342 cgctgggcgcaaggatcatccaggccggcggcgtggagaaagtcttccggcggtggttcg 401 |||||||||| ||||| |||||||||||||||||||||| || ||||||| ||||||| Sbjct: 38353 cgctgggcgcccggatcctccaggccggcggcgtggagaaggtgttccggcagtggttct 38294 Query: 402 ccgtggagaagggcgagaagctcctcaaggcctcgcagtgctacctgtccaccaccgccg 461 ||||||| ||| ||||||||| |||| ||| ||||||||||||||||| || || |||| Sbjct: 38293 ccgtggacaagaacgagaagctgctcagggcgtcgcagtgctacctgtcgacgacggccg 38234 Query: 462 gaccgatcgccggagtgctcttcgtatcgtcggagagggtggccttccgcagcgaccggt 521 | ||||||||||| |||| ||||| ||| ||||| |||| || ||||||||||||||| Sbjct: 38233 ggccgatcgccggcatgctgttcgtgtcgacggagcgggtcgcgttccgcagcgaccggc 38174 Query: 522 cgctggagctgacctcgcccaagggcgacacggtgcgtgtgccgtacaaggtggccgtcc 581 |||||| | || || | || ||||||| |||||| || |||||||||||| || ||| Sbjct: 38173 cgctggcggtgtccgccccgggcggcgacaaggtgcgcgtcccgtacaaggtgaccatcc 38114 Query: 582 cgctgaggagggtgaaggcggccaggccgagcgagaaccagcaccggccggagcagaagt 641 ||||| ||| ||||||||| |||| ||||||||||||| ||||| ||| |||||||||| Sbjct: 38113 cgctgcggaaggtgaaggccgccaagccgagcgagaacaagcacaagcccgagcagaagt 38054 Query: 642 acgtccagctggtgaccgacgacggcttcgagttctggttcatgggcttcgtcagctacc 701 || || || | || ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 38053 acatcgaggtcgtcaccaacgacggcttcgagttctggttcatgggcttcgtcagctacc 37994 Query: 702 aggcgtccctgcagcacctcgagcaggccatcgcg 736 | || ||||| ||||| ||||||||| ||||| Sbjct: 37993 accgctcgctgcaccacctggagcaggccgtcgcg 37959 Score = 71.9 bits (36), Expect = 5e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 628 gccggagcagaagtacgtccagctggtgaccgacgacggcttcgagttctggttcatggg 687 |||||||||||||||| | || ||| |||| |||||| |||||||||||||||||||| Sbjct: 33475 gccggagcagaagtacatacacgtggccaccgtcgacgggttcgagttctggttcatggg 33416 Query: 688 cttcgtcagctaccag 703 ||||| ||||||||| Sbjct: 33415 attcgtgagctaccag 33400 Score = 56.0 bits (28), Expect = 3e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 320 gagaccgtgaggggcaagctgtcgctgggcgcaaggatcatccaggccggcggcgtggag 379 ||||| |||||||| |||||| |||||||| |||||| | |||||||||||||||||| Sbjct: 33786 gagacggtgagggggaagctgagcctgggcgcgaggatcctgcaggccggcggcgtggag 33727
>ref|NM_001059899.1| Oryza sativa (japonica cultivar-group) Os04g0526800 (Os04g0526800) mRNA, complete cds Length = 1103 Score = 73.8 bits (37), Expect = 1e-09 Identities = 127/157 (80%) Strand = Plus / Plus Query: 436 gcagtgctacctgtccaccaccgccggaccgatcgccggagtgctcttcgtatcgtcgga 495 |||||||||||||| |||||||| ||| || |||||||| |||||||||| || | | Sbjct: 513 gcagtgctacctgtacaccaccggcgggcccatcgccgggatgctcttcgtctccaccaa 572 Query: 496 gagggtggccttccgcagcgaccggtcgctggagctgacctcgcccaagggcgacacggt 555 || ||| |||||||||||||||||| || | | | |||||| ||||||||||| | Sbjct: 573 gaaggtcgccttccgcagcgaccggccggtcacggtcacctcggccaagggcgacgtcgc 632 Query: 556 gcgtgtgccgtacaaggtggccgtcccgctgaggagg 592 ||| ||||| |||||||||| |||||||| |||||| Sbjct: 633 gcgggtgccctacaaggtggtggtcccgctcaggagg 669 Score = 67.9 bits (34), Expect = 7e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 662 gacggcttcgagttctggttcatgggcttcgtcagctaccag 703 |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 739 gacggcttcgagttctggttcatggggttcgtgagctaccag 780
>dbj|AK061581.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-H09, full insert sequence Length = 1103 Score = 73.8 bits (37), Expect = 1e-09 Identities = 127/157 (80%) Strand = Plus / Plus Query: 436 gcagtgctacctgtccaccaccgccggaccgatcgccggagtgctcttcgtatcgtcgga 495 |||||||||||||| |||||||| ||| || |||||||| |||||||||| || | | Sbjct: 513 gcagtgctacctgtacaccaccggcgggcccatcgccgggatgctcttcgtctccaccaa 572 Query: 496 gagggtggccttccgcagcgaccggtcgctggagctgacctcgcccaagggcgacacggt 555 || ||| |||||||||||||||||| || | | | |||||| ||||||||||| | Sbjct: 573 gaaggtcgccttccgcagcgaccggccggtcacggtcacctcggccaagggcgacgtcgc 632 Query: 556 gcgtgtgccgtacaaggtggccgtcccgctgaggagg 592 ||| ||||| |||||||||| |||||||| |||||| Sbjct: 633 gcgggtgccctacaaggtggtggtcccgctcaggagg 669 Score = 67.9 bits (34), Expect = 7e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 662 gacggcttcgagttctggttcatgggcttcgtcagctaccag 703 |||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 739 gacggcttcgagttctggttcatggggttcgtgagctaccag 780
>ref|NM_001054059.1| Oryza sativa (japonica cultivar-group) Os02g0636600 (Os02g0636600) mRNA, complete cds Length = 690 Score = 71.9 bits (36), Expect = 5e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 628 gccggagcagaagtacgtccagctggtgaccgacgacggcttcgagttctggttcatggg 687 |||||||||||||||| | || ||| |||| |||||| |||||||||||||||||||| Sbjct: 573 gccggagcagaagtacatacacgtggccaccgtcgacgggttcgagttctggttcatggg 632 Query: 688 cttcgtcagctaccag 703 ||||| ||||||||| Sbjct: 633 attcgtgagctaccag 648 Score = 56.0 bits (28), Expect = 3e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 320 gagaccgtgaggggcaagctgtcgctgggcgcaaggatcatccaggccggcggcgtggag 379 ||||| |||||||| |||||| |||||||| |||||| | |||||||||||||||||| Sbjct: 262 gagacggtgagggggaagctgagcctgggcgcgaggatcctgcaggccggcggcgtggag 321
>gb|DQ244392.1| Zea mays clone 6860 mRNA sequence Length = 1192 Score = 54.0 bits (27), Expect = 0.001 Identities = 27/27 (100%) Strand = Plus / Plus Query: 674 ttctggttcatgggcttcgtcagctac 700 ||||||||||||||||||||||||||| Sbjct: 831 ttctggttcatgggcttcgtcagctac 857
>ref|NM_122241.2| Arabidopsis thaliana unknown protein (AT5G23350) mRNA, complete cds Length = 1020 Score = 50.1 bits (25), Expect = 0.017 Identities = 34/37 (91%) Strand = Plus / Plus Query: 667 cttcgagttctggttcatgggcttcgtcagctaccag 703 |||||| |||||||||||||| ||||| ||||||||| Sbjct: 759 cttcgacttctggttcatgggattcgtgagctaccag 795
>ref|NM_122240.2| Arabidopsis thaliana unknown protein (AT5G23340) mRNA, complete cds Length = 2634 Score = 50.1 bits (25), Expect = 0.017 Identities = 34/37 (91%) Strand = Plus / Minus Query: 667 cttcgagttctggttcatgggcttcgtcagctaccag 703 |||||| |||||||||||||| ||||| ||||||||| Sbjct: 1986 cttcgacttctggttcatgggattcgtgagctaccag 1950
>dbj|AB007648.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKD15 Length = 76329 Score = 50.1 bits (25), Expect = 0.017 Identities = 34/37 (91%) Strand = Plus / Minus Query: 667 cttcgagttctggttcatgggcttcgtcagctaccag 703 |||||| |||||||||||||| ||||| ||||||||| Sbjct: 69758 cttcgacttctggttcatgggattcgtgagctaccag 69722 Score = 44.1 bits (22), Expect = 1.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 674 ttctggttcatgggcttcgtcagctaccag 703 |||||||||||||| ||||| ||||||||| Sbjct: 73501 ttctggttcatgggattcgtgagctaccag 73530 Score = 44.1 bits (22), Expect = 1.0 Identities = 37/42 (88%) Strand = Plus / Minus Query: 661 cgacggcttcgagttctggttcatgggcttcgtcagctacca 702 ||||||||| || |||||||||||||| ||| | |||||||| Sbjct: 74764 cgacggctttgacttctggttcatgggattcttgagctacca 74723
>dbj|AK118949.1| Arabidopsis thaliana At5g23350 mRNA for unknown protein, complete cds, clone: RAFL21-29-C05 Length = 1038 Score = 50.1 bits (25), Expect = 0.017 Identities = 34/37 (91%) Strand = Plus / Plus Query: 667 cttcgagttctggttcatgggcttcgtcagctaccag 703 |||||| |||||||||||||| ||||| ||||||||| Sbjct: 662 cttcgacttctggttcatgggattcgtgagctaccag 698
>emb|CT832291.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN009L18, full insert sequence Length = 1095 Score = 46.1 bits (23), Expect = 0.26 Identities = 26/27 (96%) Strand = Plus / Plus Query: 674 ttctggttcatgggcttcgtcagctac 700 |||||||||||||||||||||| |||| Sbjct: 745 ttctggttcatgggcttcgtcaactac 771
>ref|NM_001066841.1| Oryza sativa (japonica cultivar-group) Os07g0621300 (Os07g0621300) mRNA, complete cds Length = 1054 Score = 46.1 bits (23), Expect = 0.26 Identities = 26/27 (96%) Strand = Plus / Plus Query: 674 ttctggttcatgggcttcgtcagctac 700 |||||||||||||||||||||| |||| Sbjct: 716 ttctggttcatgggcttcgtcaactac 742
>ref|NM_001055746.1| Oryza sativa (japonica cultivar-group) Os03g0187600 (Os03g0187600) mRNA, complete cds Length = 1134 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 671 gagttctggttcatgggcttcgt 693 ||||||||||||||||||||||| Sbjct: 856 gagttctggttcatgggcttcgt 878
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 46.1 bits (23), Expect = 0.26 Identities = 26/27 (96%) Strand = Plus / Plus Query: 674 ttctggttcatgggcttcgtcagctac 700 |||||||||||||||||||||| |||| Sbjct: 25625884 ttctggttcatgggcttcgtcaactac 25625910
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 671 gagttctggttcatgggcttcgt 693 ||||||||||||||||||||||| Sbjct: 4576306 gagttctggttcatgggcttcgt 4576328 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 670 cgagttctggttcatgggcttcgtc 694 |||||||||||||||||| |||||| Sbjct: 29998290 cgagttctggttcatggggttcgtc 29998266
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 46.1 bits (23), Expect = 0.26 Identities = 26/27 (96%) Strand = Plus / Plus Query: 674 ttctggttcatgggcttcgtcagctac 700 |||||||||||||||||||||| |||| Sbjct: 79857 ttctggttcatgggcttcgtcaactac 79883
>dbj|AK071567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100G12, full insert sequence Length = 1055 Score = 46.1 bits (23), Expect = 0.26 Identities = 26/27 (96%) Strand = Plus / Plus Query: 674 ttctggttcatgggcttcgtcagctac 700 |||||||||||||||||||||| |||| Sbjct: 717 ttctggttcatgggcttcgtcaactac 743
>dbj|AK068057.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130C18, full insert sequence Length = 1136 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 671 gagttctggttcatgggcttcgt 693 ||||||||||||||||||||||| Sbjct: 857 gagttctggttcatgggcttcgt 879
>dbj|AK059824.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-E06, full insert sequence Length = 1000 Score = 46.1 bits (23), Expect = 0.26 Identities = 26/27 (96%) Strand = Plus / Plus Query: 674 ttctggttcatgggcttcgtcagctac 700 |||||||||||||||||||||| |||| Sbjct: 661 ttctggttcatgggcttcgtcaactac 687
>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09, complete sequence Length = 148894 Score = 46.1 bits (23), Expect = 0.26 Identities = 23/23 (100%) Strand = Plus / Plus Query: 671 gagttctggttcatgggcttcgt 693 ||||||||||||||||||||||| Sbjct: 17146 gagttctggttcatgggcttcgt 17168
>ref|NM_122242.3| Arabidopsis thaliana unknown protein (AT5G23360) mRNA, complete cds Length = 958 Score = 44.1 bits (22), Expect = 1.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 674 ttctggttcatgggcttcgtcagctaccag 703 |||||||||||||| ||||| ||||||||| Sbjct: 633 ttctggttcatgggattcgtgagctaccag 662
>ref|NM_122243.2| Arabidopsis thaliana unknown protein (AT5G23370) mRNA, complete cds Length = 941 Score = 44.1 bits (22), Expect = 1.0 Identities = 37/42 (88%) Strand = Plus / Plus Query: 661 cgacggcttcgagttctggttcatgggcttcgtcagctacca 702 ||||||||| || |||||||||||||| ||| | |||||||| Sbjct: 637 cgacggctttgacttctggttcatgggattcttgagctacca 678
>gb|BT011297.1| Arabidopsis thaliana At5g23360 gene, complete cds Length = 633 Score = 44.1 bits (22), Expect = 1.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 674 ttctggttcatgggcttcgtcagctaccag 703 |||||||||||||| ||||| ||||||||| Sbjct: 556 ttctggttcatgggattcgtgagctaccag 585
>gb|BT010826.1| Arabidopsis thaliana At5g23360 mRNA, complete cds Length = 751 Score = 44.1 bits (22), Expect = 1.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 674 ttctggttcatgggcttcgtcagctaccag 703 |||||||||||||| ||||| ||||||||| Sbjct: 581 ttctggttcatgggattcgtgagctaccag 610
>gb|AC163670.3| Mus musculus BAC clone RP23-31C13 from chromosome 12, complete sequence Length = 214651 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 tccagcaccaacccacacacaa 34 |||||||||||||||||||||| Sbjct: 194612 tccagcaccaacccacacacaa 194633
>emb|AL133520.5| Human DNA sequence from clone RP1-101A2 on chromosome 20, complete sequence Length = 47325 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 131 caacagcaaatggagaaggcag 152 |||||||||||||||||||||| Sbjct: 17455 caacagcaaatggagaaggcag 17434
>emb|AL133231.15| Human DNA sequence from clone RP5-867F11 on chromosome 20 Contains the TCF15 gene for transcription factor 15 (basic helix-loop-helix) and a CpG island, complete sequence Length = 50488 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 141 tggagaaggcaggacatgagca 162 |||||||||||||||||||||| Sbjct: 14948 tggagaaggcaggacatgagca 14969
>emb|BX830405.1|CNS0A03A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB78ZG08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 958 Score = 44.1 bits (22), Expect = 1.0 Identities = 28/30 (93%) Strand = Plus / Plus Query: 674 ttctggttcatgggcttcgtcagctaccag 703 |||||||||||||| ||||| ||||||||| Sbjct: 633 ttctggttcatgggattcgtgagctaccag 662
>gb|AC158404.2| Mus musculus BAC clone RP24-112K13 from chromosome 12, complete sequence Length = 174961 Score = 44.1 bits (22), Expect = 1.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 tccagcaccaacccacacacaa 34 |||||||||||||||||||||| Sbjct: 62150 tccagcaccaacccacacacaa 62171
>ref|NM_001057731.1| Oryza sativa (japonica cultivar-group) Os03g0736700 (Os03g0736700) mRNA, complete cds Length = 1226 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 670 cgagttctggttcatgggcttcgtc 694 |||||||||||||||||| |||||| Sbjct: 889 cgagttctggttcatggggttcgtc 913
>emb|AM180355.1| Clostridium difficile 630 complete genome Length = 4290252 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 636 agaagtacgtccagctggtga 656 ||||||||||||||||||||| Sbjct: 2409185 agaagtacgtccagctggtga 2409205
>ref|XM_001141560.1| PREDICTED: Pan troglodytes reprimo, TP53 dependant G2 arrest mediator candidate (RPRM), mRNA Length = 1735 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 651 tggtgaccgacgacggcttcg 671 ||||||||||||||||||||| Sbjct: 347 tggtgaccgacgacggcttcg 367
>ref|XM_001145372.1| PREDICTED: Pan troglodytes stratifin, transcript variant 1 (SFN), mRNA Length = 1262 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 cgccgtggagaagggcgagaagctc 424 ||||||||||||||||||| ||||| Sbjct: 171 cgccgtggagaagggcgaggagctc 195
>ref|XM_001145451.1| PREDICTED: Pan troglodytes stratifin, transcript variant 2 (SFN), mRNA Length = 1443 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 cgccgtggagaagggcgagaagctc 424 ||||||||||||||||||| ||||| Sbjct: 268 cgccgtggagaagggcgaggagctc 292
>gb|DQ894162.1| Homo sapiens clone FLH168263.01L; RZPDo839E0691D SFN mRNA, partial sequence Length = 747 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 cgccgtggagaagggcgagaagctc 424 ||||||||||||||||||| ||||| Sbjct: 84 cgccgtggagaagggcgaggagctc 108
>ref|XM_001092041.1| PREDICTED: Macaca mulatta similar to Olfactory receptor 6V1 (LOC703727), mRNA Length = 1083 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 374 gtggagaaagtcttccggcgg 394 ||||||||||||||||||||| Sbjct: 761 gtggagaaagtcttccggcgg 741
>gb|BC114727.1| Bos taurus cDNA clone MGC:138015 IMAGE:8083333, complete cds Length = 1472 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 651 tggtgaccgacgacggcttcg 671 ||||||||||||||||||||| Sbjct: 310 tggtgaccgacgacggcttcg 330
>gb|M93010.1|HUMMAMEPI Human epithelial cell marker protein 1 (HMe1) mRNA, complete cds Length = 1245 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 cgccgtggagaagggcgagaagctc 424 ||||||||||||||||||| ||||| Sbjct: 94 cgccgtggagaagggcgaggagctc 118
>ref|NM_006142.3| Homo sapiens stratifin (SFN), mRNA Length = 1336 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 cgccgtggagaagggcgagaagctc 424 ||||||||||||||||||| ||||| Sbjct: 155 cgccgtggagaagggcgaggagctc 179
>ref|XM_866327.1| PREDICTED: Bos taurus similar to reprimo, TP53 dependant G2 arrest mediator candidate (LOC614739), mRNA Length = 1120 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 651 tggtgaccgacgacggcttcg 671 ||||||||||||||||||||| Sbjct: 288 tggtgaccgacgacggcttcg 308
>gb|BC000329.2| Homo sapiens stratifin, mRNA (cDNA clone MGC:8516 IMAGE:2822397), complete cds Length = 1312 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 cgccgtggagaagggcgagaagctc 424 ||||||||||||||||||| ||||| Sbjct: 135 cgccgtggagaagggcgaggagctc 159
>gb|BC000995.2| Homo sapiens stratifin, mRNA (cDNA clone MGC:5018 IMAGE:3445915), complete cds Length = 1309 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 cgccgtggagaagggcgagaagctc 424 ||||||||||||||||||| ||||| Sbjct: 132 cgccgtggagaagggcgaggagctc 156
>gb|BC023552.2| Homo sapiens stratifin, mRNA (cDNA clone MGC:19713 IMAGE:3534328), complete cds Length = 1417 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 cgccgtggagaagggcgagaagctc 424 ||||||||||||||||||| ||||| Sbjct: 159 cgccgtggagaagggcgaggagctc 183
>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete sequence Length = 159661 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 670 cgagttctggttcatgggcttcgtc 694 |||||||||||||||||| |||||| Sbjct: 103738 cgagttctggttcatggggttcgtc 103762
>gb|BC001550.1| Homo sapiens stratifin, mRNA (cDNA clone MGC:5019 IMAGE:3457665), complete cds Length = 1222 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 cgccgtggagaagggcgagaagctc 424 ||||||||||||||||||| ||||| Sbjct: 137 cgccgtggagaagggcgaggagctc 161
>dbj|AK074808.1| Homo sapiens cDNA FLJ90327 fis, clone NT2RP2001915, highly similar to Candidate mediator of the p53-dependent G2 arrest Length = 1422 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 651 tggtgaccgacgacggcttcg 671 ||||||||||||||||||||| Sbjct: 299 tggtgaccgacgacggcttcg 319
>gb|AC159210.2| Mus musculus BAC clone RP23-54F9 from chromosome 13, complete sequence Length = 228429 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 16 agcaccaacccacacacaagcaccaacaa 44 ||||| |||||||||||||||| |||||| Sbjct: 206888 agcacaaacccacacacaagcatcaacaa 206916
>ref|XM_754135.1| Ustilago maydis 521 hypothetical protein (UM03081.1) partial mRNA Length = 4047 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 654 tgaccgacgacggcttcgagt 674 ||||||||||||||||||||| Sbjct: 1603 tgaccgacgacggcttcgagt 1583
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 355 gatcatccaggccggcggcgtggag 379 ||||||||||||||||||| ||||| Sbjct: 5025327 gatcatccaggccggcggcatggag 5025351
>emb|BX510909.19| Zebrafish DNA sequence from clone DKEY-195E19 in linkage group 5, complete sequence Length = 190731 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 gcaccaacccacacacaagcaccaa 41 |||||||| |||||||||||||||| Sbjct: 97024 gcaccaacacacacacaagcaccaa 97000
>emb|CR712619.2|CNS0GCT3 Tetraodon nigroviridis full-length cDNA Length = 616 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 651 tggtgaccgacgacggcttcg 671 ||||||||||||||||||||| Sbjct: 322 tggtgaccgacgacggcttcg 342
>emb|CR711083.2|CNS0GBMF Tetraodon nigroviridis full-length cDNA Length = 620 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 651 tggtgaccgacgacggcttcg 671 ||||||||||||||||||||| Sbjct: 322 tggtgaccgacgacggcttcg 342
>emb|CR700034.2|CNS0G33I Tetraodon nigroviridis full-length cDNA Length = 987 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 651 tggtgaccgacgacggcttcg 671 ||||||||||||||||||||| Sbjct: 265 tggtgaccgacgacggcttcg 285
>emb|CR694070.2|CNS0FYHU Tetraodon nigroviridis full-length cDNA Length = 970 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 651 tggtgaccgacgacggcttcg 671 ||||||||||||||||||||| Sbjct: 283 tggtgaccgacgacggcttcg 303
>emb|CR691418.2|CNS0FWG6 Tetraodon nigroviridis full-length cDNA Length = 996 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 651 tggtgaccgacgacggcttcg 671 ||||||||||||||||||||| Sbjct: 286 tggtgaccgacgacggcttcg 306
>gb|AC004873.3| Homo sapiens PAC clone RP4-742P4 from 1, complete sequence Length = 131329 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 cgccgtggagaagggcgagaagctc 424 ||||||||||||||||||| ||||| Sbjct: 49363 cgccgtggagaagggcgaggagctc 49387
>emb|AL034380.26|HS50O24 Human DNA sequence from clone RP1-50O24 on chromosome 1p35.1-35.3 Contains the 3' end of the SMARCF1 gene for SWI/SNF related, matrix associated, actin dependent regulator of chromatin (subfamily f, member 1), a novel gene (FLJ20477), the ZDHHC18 gene for zinc finger, DHHC domain containing 18, the SFN gene for stratifin, two novel genes, a novel gene (FLJ10349), the 3' end of a novel gene (FLJ12455) and two CpG islands, complete sequence Length = 157435 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 400 cgccgtggagaagggcgagaagctc 424 ||||||||||||||||||| ||||| Sbjct: 32936 cgccgtggagaagggcgaggagctc 32912
>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete sequence Length = 139946 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 670 cgagttctggttcatgggcttcgtc 694 |||||||||||||||||| |||||| Sbjct: 72809 cgagttctggttcatggggttcgtc 72785
>ref|NM_019845.2| Homo sapiens reprimo, TP53 dependent G2 arrest mediator candidate (RPRM), mRNA Length = 1496 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 651 tggtgaccgacgacggcttcg 671 ||||||||||||||||||||| Sbjct: 347 tggtgaccgacgacggcttcg 367
>emb|X57348.1|HS9112 H.sapiens mRNA (clone 9112) Length = 1450 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 cgccgtggagaagggcgagaagctc 424 ||||||||||||||||||| ||||| Sbjct: 249 cgccgtggagaagggcgaggagctc 273
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 453 ccaccgccggaccgatcgccggagt 477 |||| |||||||||||||||||||| Sbjct: 4110067 ccactgccggaccgatcgccggagt 4110043
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 588 ggagggtgaaggcggccaggccgag 612 ||||||||| ||||||||||||||| Sbjct: 207550 ggagggtgacggcggccaggccgag 207574
>emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 60 Length = 196677 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 tccattccaaatttccaacagcaaa 140 |||||||||||||||||||| |||| Sbjct: 9376 tccattccaaatttccaacaacaaa 9352
>emb|AL035394.1|ATF9D16 Arabidopsis thaliana DNA chromosome 4, BAC clone F9D16 (ESSAII project) Length = 119430 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 116 tccattccaaatttccaacagcaaa 140 |||||||||||||||||||| |||| Sbjct: 67785 tccattccaaatttccaacaacaaa 67761
>gb|AC012501.7| Homo sapiens BAC clone RP11-440F15 from 2, complete sequence Length = 214838 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 651 tggtgaccgacgacggcttcg 671 ||||||||||||||||||||| Sbjct: 118546 tggtgaccgacgacggcttcg 118526
>emb|CR610159.1| full-length cDNA clone CS0DF022YC03 of Fetal brain of Homo sapiens (human) Length = 1405 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 651 tggtgaccgacgacggcttcg 671 ||||||||||||||||||||| Sbjct: 283 tggtgaccgacgacggcttcg 303
>emb|CR609982.1| full-length cDNA clone CS0DF013YO17 of Fetal brain of Homo sapiens (human) Length = 1244 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 651 tggtgaccgacgacggcttcg 671 ||||||||||||||||||||| Sbjct: 183 tggtgaccgacgacggcttcg 203
>emb|CR596780.1| full-length cDNA clone CS0DF005YF04 of Fetal brain of Homo sapiens (human) Length = 1397 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 651 tggtgaccgacgacggcttcg 671 ||||||||||||||||||||| Sbjct: 288 tggtgaccgacgacggcttcg 308
>emb|CR541926.1| Homo sapiens full open reading frame cDNA clone RZPDo834H1133D for gene SFN, stratifin; complete cds, without stopcodon Length = 744 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 cgccgtggagaagggcgagaagctc 424 ||||||||||||||||||| ||||| Sbjct: 84 cgccgtggagaagggcgaggagctc 108
>emb|CR541905.1| Homo sapiens full open reading frame cDNA clone RZPDo834E0233D for gene SFN, stratifin; complete cds, incl. stopcodon Length = 747 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 cgccgtggagaagggcgagaagctc 424 ||||||||||||||||||| ||||| Sbjct: 84 cgccgtggagaagggcgaggagctc 108
>gb|AF152893.1|AF152893 Mus musculus 14-3-3 protein sigma (Mme1) mRNA, complete cds Length = 747 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 cgccgtggagaagggcgagaagctc 424 ||||||||||||||||||| ||||| Sbjct: 84 cgccgtggagaagggcgaggagctc 108
>dbj|AK104642.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-F11, full insert sequence Length = 1045 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 670 cgagttctggttcatgggcttcgtc 694 |||||||||||||||||| |||||| Sbjct: 842 cgagttctggttcatggggttcgtc 866
>dbj|AK104415.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-F03, full insert sequence Length = 1174 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 670 cgagttctggttcatgggcttcgtc 694 |||||||||||||||||| |||||| Sbjct: 890 cgagttctggttcatggggttcgtc 914
>dbj|AK073026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144G12, full insert sequence Length = 1210 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 670 cgagttctggttcatgggcttcgtc 694 |||||||||||||||||| |||||| Sbjct: 844 cgagttctggttcatggggttcgtc 868
>dbj|AK060947.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-F03, full insert sequence Length = 1226 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 670 cgagttctggttcatgggcttcgtc 694 |||||||||||||||||| |||||| Sbjct: 889 cgagttctggttcatggggttcgtc 913
>dbj|AK060219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-E07, full insert sequence Length = 366 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 670 cgagttctggttcatgggcttcgtc 694 |||||||||||||||||| |||||| Sbjct: 20 cgagttctggttcatggggttcgtc 44
>gb|AY894114.1| Synthetic construct Homo sapiens clone FLH130877.01L stratifin (SFN) mRNA, partial cds Length = 747 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 cgccgtggagaagggcgagaagctc 424 ||||||||||||||||||| ||||| Sbjct: 84 cgccgtggagaagggcgaggagctc 108
>gb|AY893275.1| Synthetic construct Homo sapiens clone FLH130843.01X stratifin (SFN) mRNA, complete cds Length = 747 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 cgccgtggagaagggcgagaagctc 424 ||||||||||||||||||| ||||| Sbjct: 84 cgccgtggagaagggcgaggagctc 108
>gb|BC002995.1| Homo sapiens stratifin, mRNA (cDNA clone MGC:3828 IMAGE:2822397), complete cds Length = 1312 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 cgccgtggagaagggcgagaagctc 424 ||||||||||||||||||| ||||| Sbjct: 135 cgccgtggagaagggcgaggagctc 159
>gb|BC002908.2| Homo sapiens reprimo, TP53 dependent G2 arrest mediator candidate, mRNA (cDNA clone MGC:11260 IMAGE:3942270), complete cds Length = 1440 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 651 tggtgaccgacgacggcttcg 671 ||||||||||||||||||||| Sbjct: 291 tggtgaccgacgacggcttcg 311
>gb|AC166074.3| Mus musculus BAC clone RP23-152H18 from chromosome 13, complete sequence Length = 224712 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 16 agcaccaacccacacacaagcaccaacaa 44 ||||| |||||||||||||||| |||||| Sbjct: 186888 agcacaaacccacacacaagcatcaacaa 186860
>gb|AF029082.1|AF029082 Homo sapiens 14-3-3 sigma protein mRNA, complete cds Length = 1320 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 cgccgtggagaagggcgagaagctc 424 ||||||||||||||||||| ||||| Sbjct: 155 cgccgtggagaagggcgaggagctc 179
>gb|AF029081.1|AF029081 Homo sapiens 14-3-3 sigma protein promoter and gene, complete cds Length = 10034 Score = 42.1 bits (21), Expect = 4.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 400 cgccgtggagaagggcgagaagctc 424 ||||||||||||||||||| ||||| Sbjct: 8721 cgccgtggagaagggcgaggagctc 8745
>gb|AC084069.28| Mus musculus strain C57BL/6J chromosome 13 clone rp23-257b17, complete sequence Length = 222775 Score = 42.1 bits (21), Expect = 4.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 16 agcaccaacccacacacaagcaccaacaa 44 ||||| |||||||||||||||| |||||| Sbjct: 1906 agcacaaacccacacacaagcatcaacaa 1934
>dbj|AB043585.1| Homo sapiens mRNA for Reprimo, complete cds Length = 1510 Score = 42.1 bits (21), Expect = 4.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 651 tggtgaccgacgacggcttcg 671 ||||||||||||||||||||| Sbjct: 347 tggtgaccgacgacggcttcg 367 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 157,012,149 Number of extensions: 7848567 Number of successful extensions: 146811 Number of sequences better than 10.0: 96 Number of HSP's gapped: 146802 Number of HSP's successfully gapped: 149 Length of query: 1078 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1055 Effective length of database: 18,503,978,556 Effective search space: 19521697376580 Effective search space used: 19521697376580 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
