ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf96d16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK243267.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100049F09, full insert sequence Length = 2956 Score = 973 bits (491), Expect = 0.0 Identities = 847/963 (87%), Gaps = 2/963 (0%) Strand = Plus / Plus Query: 827 tgccatgtgaaacttaagatcaaatctttcaaggtgcctgaacttctaattgagatccca 886 ||||| || ||||||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1508 tgccacgtaaaacttaggatcaagtctttcaaggtgcctgaacttctaattgagatccca 1567 Query: 887 gaaactgcttctgttggttcactgaagaaaactgttctggaggcagtaaatgccatgctt 946 |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1568 gaaactgcgactgttggttcactgaagaaaactgttctggaggcagtaaatgccatactt 1627 Query: 947 ggaggtggtctgcgtgtgggtgttcttcaccatggaaagaaaatcagggatgatagcaaa 1006 ||||||||||||||||| ||||| || || ||||| |||||| |||| ||||||| ||| Sbjct: 1628 ggaggtggtctgcgtgtcggtgtgctccatcatgggaagaaagtcagagatgataataaa 1687 Query: 1007 accctaatacaagctgggattggtcatgatgatatgctggacaacataggcttttcactt 1066 ||| |||| || ||||||||| ||||||||| | ||||||||| | || ||||| ||| Sbjct: 1688 accttaatgcaggctgggatttctcatgatgaggtactggacaacctgggtttttctctt 1747 Query: 1067 gaacccaactgtacacggcattcatcacaagttgcagctcctgaagatattgaattccta 1126 |||||||| ||| ||| |||| | |||||| | || |||| ||||||| ||||||| | Sbjct: 1748 gaacccaattgtgcaccgcatccgtcacaactctcacctcccgaagataatgaattcatg 1807 Query: 1127 gaaactgttgaaactactgaacccctagcaaggatcgcacctgcggactcgtcttccaag 1186 ||||||||||| ||||||||||||||||| ||||| |||||||| ||||| ||||||||| Sbjct: 1808 gaaactgttgatactactgaacccctagctaggattgcacctgctgactcatcttccaag 1867 Query: 1187 cacggcgaagtcgatgcctcacaggagcttgcattgacacccttgacagctaattaccag 1246 || || ||||| ||||| |||||||||||||||||| ||||||| |||| || ||||| Sbjct: 1868 catggtgaagttgatgcttcacaggagcttgcattggcacccttatcagcaaactaccaa 1927 Query: 1247 gggaatgatcatgattcagtgcactctcctgggggcatctcctcacctgagagagcttca 1306 |||| ||||||||| | |||||||||||||||||||| || |||||||| | || || Sbjct: 1928 gggagtgatcatgactttgtgcactctcctgggggcatgtcttcacctgataaggcatcc 1987 Query: 1307 gcaaactcgcgagctattgttccagttacacccgtagattccagcgcaggggcgatagtt 1366 |||||||||||||||||||||||||||| || | |||||||| || ||||| |||||| Sbjct: 1988 acaaactcgcgagctattgttccagttactcctgcagattccaatgctggggctatagtt 2047 Query: 1367 ccagcaaacaaggcgaagagatcagcggaacaggggcagcgtcgaatcagacgtccgttc 1426 ||||||||||| || ||||| ||| | ||||| ||||| || |||||||| ||||||||| Sbjct: 2048 ccagcaaacaaagcaaagaggtcacctgaacaagggcaacgccgaatcaggcgtccgttc 2107 Query: 1427 tctgttgctgaagtggaagcacttgtgcttgcagtcgaaaagcttggaactggaagatgg 1486 |||||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||||| Sbjct: 2108 tctgttgccgaagtggaagcccttgtgcttgcagttgaaaagcttggaaccggaagatgg 2167 Query: 1487 cgagatgttaaacttcgtgcttttgataatgccaagcatcggacctatgttgatcttaag 1546 |||||||| |||||||| || ||||||||||| ||||| ||||| || |||||||||||| Sbjct: 2168 cgagatgtcaaacttcgggcctttgataatgcaaagcaccggacttacgttgatcttaag 2227 Query: 1547 gacaaatggaagacgctggtgcacacggcgagcatctcgccccagcagcggcgcggtgag 1606 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||| Sbjct: 2228 gacaaatggaagacgctcgtgcacacggcgagcatctcgccccagcagcggcgtggcgag 2287 Query: 1607 ccggtgccgcaggatctgctcgaccgggtccttgcggcccagtcctattggtcccagcag 1666 |||||||| ||||| ||||||||| ||||||| ||||| ||| |||||||||| |||||| Sbjct: 2288 ccggtgccacaggagctgctcgacagggtcctggcggctcaggcctattggtctcagcag 2347 Query: 1667 caggccaagctccagcctaagacgcccccactggctgaggctcgcctgctcacctaataa 1726 || |||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 2348 caagccaagctccag-ctaagacgcccccgctggctgaggctctcctgctcacctaataa 2406 Query: 1727 ctcccatctcagcaaatggtctcttaagaaaccatcccagcttttgtataaagtcagtaa 1786 | | |||||||| |||||||||||| |||||||| |||||||||||||||||||||| | Sbjct: 2407 c-ctgatctcagctaatggtctcttaggaaaccattccagcttttgtataaagtcagtca 2465 Query: 1787 gtc 1789 ||| Sbjct: 2466 gtc 2468 Score = 345 bits (174), Expect = 4e-91 Identities = 237/258 (91%) Strand = Plus / Plus Query: 428 aaatcttccgggtgcacacattcaagcaccgccactaacaggggcttcaggcccaattgt 487 ||||||||||||||||| ||| | |||||||| ||||||||||| ||||||||||||||| Sbjct: 1121 aaatcttccgggtgcactcatccgagcaccgctactaacaggggtttcaggcccaattgt 1180 Query: 488 acagctgatcaaagtagggtgaagaagttcctcgcctgtaagtacaggaaagttgctcct 547 ||||||| ||| |||||||| |||||||| |||||||||||| |||||||||||||||| Sbjct: 1181 acagctggtcatagtagggtaaagaagttgctcgcctgtaagcacaggaaagttgctcca 1240 Query: 548 gccagaatgcacaaaggagatctttcctatagtgatgctgaccggaagccttctttccga 607 ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1241 gccaggatgcacaaaggagatctttcctatagtgatgttgaccggaagccttctttccgc 1300 Query: 608 aacaagaaaatgtattatacgcggcaaaggacccaaaggagtacatttaagcgaaggaag 667 |||||||||||||||||||| || |||||||| |||||||| ||||| ||||| |||||| Sbjct: 1301 aacaagaaaatgtattatacacgacaaaggacacaaaggagcacattcaagcggaggaag 1360 Query: 668 atgttggatcgtcattca 685 ||||| |||||||||||| Sbjct: 1361 atgtttgatcgtcattca 1378 Score = 244 bits (123), Expect = 1e-60 Identities = 237/275 (86%) Strand = Plus / Plus Query: 56 aaggcaaagtctgaggctgtggacaaggagccctcgatgataagctgtaccaaggctgac 115 ||||| ||||| ||||| |||||||||| |||| ||||||||||| ||||||||||| Sbjct: 752 aaggccaagtccgaggcactggacaaggaatcctcaatgataagctgcaccaaggctgaa 811 Query: 116 ttgggtagtaatttcggggcgatcgcggataggtggtcgcctgaatccgtggagtcaggg 175 |||||| ||||||| | |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 812 ttgggttgtaattttgcagcgatcgctgataggtggtcgcctgaatccgtggagtcaggg 871 Query: 176 gccttcactggggatgcagcggcaaatgtgatggcattggccgcagcagccttcaacaag 235 |||||||||||||||||||| |||| || |||| | || || ||| |||| ||||| Sbjct: 872 gccttcactggggatgcagctgcaattgcgatgccggctaccacatcaggcttccacaag 931 Query: 236 aacgcccctgacatgtacaatcttctcgaccccatggatgttgatgtgaagccgcctcct 295 || || || || ||||| ||||| ||||| || |||||||| ||||| |||||||||||| Sbjct: 932 aatgctccagatatgtataatctgctcgatccaatggatgtggatgtaaagccgcctcct 991 Query: 296 ttggtcagctctgacagcaccggcgagatgccgtt 330 |||||||||||||||||||||||||| |||||||| Sbjct: 992 ttggtcagctctgacagcaccggcgaaatgccgtt 1026 Score = 135 bits (68), Expect = 8e-28 Identities = 87/92 (94%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 1889 ttgttgtaatatctactcaccaactattcttttaagccagggttctctctccttgtgaat 1948 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 2541 ttgttgtaatatctactcaccaattattctttcaagccagggttctctctccttgtgaat 2600 Query: 1949 ttaaccaaagg-aaagggtatttctttggcaa 1979 ||||||||||| | ||||||||||||||||| Sbjct: 2601 ttaaccaaaggtatggggtatttctttggcaa 2632 Score = 89.7 bits (45), Expect = 4e-14 Identities = 157/188 (83%), Gaps = 11/188 (5%) Strand = Plus / Plus Query: 2092 agcttcagattcttttgttcagttcaattcattcttt-gttaagaggatgagaaaggtgg 2150 |||||||||||||||||| || ||||||||||||||| |||| ||||||||| |||| Sbjct: 2742 agcttcagattcttttgt-caattcaattcattcttttgtta---ggatgagaatggtga 2797 Query: 2151 aaggataaggaggga-ggatctgtgctcccctttttcctgttttttcttcttctgtta-c 2208 || |||||||||||| ||||| |||| ||| |||| ||||| ||| || ||||| | Sbjct: 2798 aaagataaggagggatggatcattgcttcccctttt----tttttcctttttttgttatc 2853 Query: 2209 ttagttgtactattttcccttcaccaatcttgtagttattttgatcccctcaacattgta 2268 ||| |||||||| || ||||||||||||||||||||| ||| ||||||||| ||||| Sbjct: 2854 ctaggtgtactatgttttcttcaccaatcttgtagttatcttggtcccctcaaagttgta 2913 Query: 2269 cttgatca 2276 |||||||| Sbjct: 2914 cttgatca 2921 Score = 73.8 bits (37), Expect = 3e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 1793 cagtcagcccattgaaaggaggttaaggaagatagtagaaaaaaatatatata 1845 ||||||| ||||| |||||||||||||||||||| |||||||||| ||||||| Sbjct: 2460 cagtcagtccattcaaaggaggttaaggaagatattagaaaaaaagatatata 2512 Score = 50.1 bits (25), Expect = 0.036 Identities = 25/25 (100%) Strand = Plus / Plus Query: 2024 tccatgaactgagatctgcagtgac 2048 ||||||||||||||||||||||||| Sbjct: 2667 tccatgaactgagatctgcagtgac 2691 Score = 44.1 bits (22), Expect = 2.2 Identities = 37/42 (88%) Strand = Plus / Plus Query: 763 ttctttggaagcaaacaagggcagcaactcaacgccattcca 804 ||||||||||||||||||||| | ||| ||||| ||||||| Sbjct: 1444 ttctttggaagcaaacaaggggaccaattcaacagcattcca 1485
>ref|NM_001056237.1| Oryza sativa (japonica cultivar-group) Os03g0274300 (Os03g0274300) mRNA, complete cds Length = 2193 Score = 922 bits (465), Expect = 0.0 Identities = 789/897 (87%) Strand = Plus / Plus Query: 827 tgccatgtgaaacttaagatcaaatctttcaaggtgcctgaacttctaattgagatccca 886 ||||| || ||||||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1297 tgccacgtaaaacttaggatcaagtctttcaaggtgcctgaacttctaattgagatccca 1356 Query: 887 gaaactgcttctgttggttcactgaagaaaactgttctggaggcagtaaatgccatgctt 946 |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1357 gaaactgcgactgttggttcactgaagaaaactgttctggaggcagtaaatgccatactt 1416 Query: 947 ggaggtggtctgcgtgtgggtgttcttcaccatggaaagaaaatcagggatgatagcaaa 1006 ||||||||||||||||| ||||| || || ||||| |||||| |||| ||||||| ||| Sbjct: 1417 ggaggtggtctgcgtgtcggtgtgctccatcatgggaagaaagtcagagatgataataaa 1476 Query: 1007 accctaatacaagctgggattggtcatgatgatatgctggacaacataggcttttcactt 1066 ||| |||| || ||||||||| ||||||||| | ||||||||| | || ||||| ||| Sbjct: 1477 accttaatgcaggctgggatttctcatgatgaggtactggacaacctgggtttttctctt 1536 Query: 1067 gaacccaactgtacacggcattcatcacaagttgcagctcctgaagatattgaattccta 1126 |||||||| ||| ||| |||| | |||||| | || |||| ||||||| ||||||| | Sbjct: 1537 gaacccaattgtgcaccgcatccgtcacaactctcacctcccgaagataatgaattcatg 1596 Query: 1127 gaaactgttgaaactactgaacccctagcaaggatcgcacctgcggactcgtcttccaag 1186 ||||||||||| ||||||||||||||||| ||||| |||||||| ||||| ||||||||| Sbjct: 1597 gaaactgttgatactactgaacccctagctaggattgcacctgctgactcatcttccaag 1656 Query: 1187 cacggcgaagtcgatgcctcacaggagcttgcattgacacccttgacagctaattaccag 1246 || || ||||| ||||| |||||||||||||||||| ||||||| |||| || ||||| Sbjct: 1657 catggtgaagttgatgcttcacaggagcttgcattggcacccttatcagcaaactaccaa 1716 Query: 1247 gggaatgatcatgattcagtgcactctcctgggggcatctcctcacctgagagagcttca 1306 |||| ||||||||| | |||||||||||||||||||| || |||||||| | || || Sbjct: 1717 gggagtgatcatgactttgtgcactctcctgggggcatgtcttcacctgataaggcatcc 1776 Query: 1307 gcaaactcgcgagctattgttccagttacacccgtagattccagcgcaggggcgatagtt 1366 |||||||||||||||||||||||||||| || | |||||||| || ||||| |||||| Sbjct: 1777 acaaactcgcgagctattgttccagttactcctgcagattccaatgctggggctatagtt 1836 Query: 1367 ccagcaaacaaggcgaagagatcagcggaacaggggcagcgtcgaatcagacgtccgttc 1426 ||||||||||| || ||||| ||| | ||||| ||||| || |||||||| ||||||||| Sbjct: 1837 ccagcaaacaaagcaaagaggtcacctgaacaagggcaacgccgaatcaggcgtccgttc 1896 Query: 1427 tctgttgctgaagtggaagcacttgtgcttgcagtcgaaaagcttggaactggaagatgg 1486 |||||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||||| Sbjct: 1897 tctgttgccgaagtggaagcccttgtgcttgcagttgaaaagcttggaaccggaagatgg 1956 Query: 1487 cgagatgttaaacttcgtgcttttgataatgccaagcatcggacctatgttgatcttaag 1546 |||||||| |||||||| || ||||||||||| ||||| ||||| || |||||||||||| Sbjct: 1957 cgagatgtcaaacttcgggcctttgataatgcaaagcaccggacttacgttgatcttaag 2016 Query: 1547 gacaaatggaagacgctggtgcacacggcgagcatctcgccccagcagcggcgcggtgag 1606 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||| Sbjct: 2017 gacaaatggaagacgctcgtgcacacggcgagcatctcgccccagcagcggcgtggcgag 2076 Query: 1607 ccggtgccgcaggatctgctcgaccgggtccttgcggcccagtcctattggtcccagcag 1666 |||||||| ||||| ||||||||| ||||||| ||||| ||| |||||||||| |||||| Sbjct: 2077 ccggtgccacaggagctgctcgacagggtcctggcggctcaggcctattggtctcagcag 2136 Query: 1667 caggccaagctccagcctaagacgcccccactggctgaggctcgcctgctcacctaa 1723 || |||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 2137 caagccaagctccagcctaagacgcccccgctggctgaggctctcctgctcacctaa 2193 Score = 244 bits (123), Expect = 1e-60 Identities = 237/275 (86%) Strand = Plus / Plus Query: 56 aaggcaaagtctgaggctgtggacaaggagccctcgatgataagctgtaccaaggctgac 115 ||||| ||||| ||||| |||||||||| |||| ||||||||||| ||||||||||| Sbjct: 427 aaggccaagtccgaggcactggacaaggaatcctcaatgataagctgcaccaaggctgaa 486 Query: 116 ttgggtagtaatttcggggcgatcgcggataggtggtcgcctgaatccgtggagtcaggg 175 |||||| ||||||| | |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 487 ttgggttgtaattttgcagcgatcgctgataggtggtcgcctgaatccgtggagtcaggg 546 Query: 176 gccttcactggggatgcagcggcaaatgtgatggcattggccgcagcagccttcaacaag 235 |||||||||||||||||||| |||| || |||| | || || ||| |||| ||||| Sbjct: 547 gccttcactggggatgcagctgcaattgcgatgccggctaccacatcaggcttccacaag 606 Query: 236 aacgcccctgacatgtacaatcttctcgaccccatggatgttgatgtgaagccgcctcct 295 || || || || ||||| ||||| ||||| || |||||||| ||||| |||||||||||| Sbjct: 607 aatgctccagatatgtataatctgctcgatccaatggatgtggatgtaaagccgcctcct 666 Query: 296 ttggtcagctctgacagcaccggcgagatgccgtt 330 |||||||||||||||||||||||||| |||||||| Sbjct: 667 ttggtcagctctgacagcaccggcgaaatgccgtt 701 Score = 210 bits (106), Expect = 2e-50 Identities = 142/154 (92%) Strand = Plus / Plus Query: 428 aaatcttccgggtgcacacattcaagcaccgccactaacaggggcttcaggcccaattgt 487 ||||||||||||||||| ||| | |||||||| ||||||||||| ||||||||||||||| Sbjct: 796 aaatcttccgggtgcactcatccgagcaccgctactaacaggggtttcaggcccaattgt 855 Query: 488 acagctgatcaaagtagggtgaagaagttcctcgcctgtaagtacaggaaagttgctcct 547 ||||||| ||| |||||||| |||||||| |||||||||||| |||||||||||||||| Sbjct: 856 acagctggtcatagtagggtaaagaagttgctcgcctgtaagcacaggaaagttgctcca 915 Query: 548 gccagaatgcacaaaggagatctttcctatagtg 581 ||||| |||||||||||||||||||||||||||| Sbjct: 916 gccaggatgcacaaaggagatctttcctatagtg 949 Score = 137 bits (69), Expect = 2e-28 Identities = 96/105 (91%) Strand = Plus / Plus Query: 581 gatgctgaccggaagccttctttccgaaacaagaaaatgtattatacgcggcaaaggacc 640 |||| ||||||||||||||||||||| |||||||||||||||||||| || |||||||| Sbjct: 1063 gatgttgaccggaagccttctttccgcaacaagaaaatgtattatacacgacaaaggaca 1122 Query: 641 caaaggagtacatttaagcgaaggaagatgttggatcgtcattca 685 |||||||| ||||| ||||| ||||||||||| |||||||||||| Sbjct: 1123 caaaggagcacattcaagcggaggaagatgtttgatcgtcattca 1167 Score = 44.1 bits (22), Expect = 2.2 Identities = 37/42 (88%) Strand = Plus / Plus Query: 763 ttctttggaagcaaacaagggcagcaactcaacgccattcca 804 ||||||||||||||||||||| | ||| ||||| ||||||| Sbjct: 1233 ttctttggaagcaaacaaggggaccaattcaacagcattcca 1274
>emb|AJ234794.1|HVU234794 Hordeum vulgare genomic DNA fragment; clone MWG2134.rev Length = 376 Score = 587 bits (296), Expect = e-164 Identities = 314/323 (97%) Strand = Plus / Minus Query: 1664 cagcaggccaagctccagcctaagacgcccccactggctgaggctcgcctgctcacctaa 1723 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 cagcaggccaagctccagcctaagacgcccccactggctgaggctcgcctgctcacctaa 317 Query: 1724 taactcccatctcagcaaatggtctcttaagaaaccatcccagcttttgtataaagtcag 1783 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 316 taactcccatctcagcaaatggtctcttaagaaaccatcccagcttttgtataaagtcag 257 Query: 1784 taagtcagccagtcagcccattgaaaggaggttaaggaagatagtagaaaaaaatatata 1843 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 taagtcagccagtcagcccattgaaaggaggttaaggaagatagtagaaaaaaatatata 197 Query: 1844 tactacatnnnnnnnnnggtacaagaagtattgaccgaccgaaaattgttgtaatatcta 1903 |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 tactacataaaaaaaaaggtacaagaagtattgaccgaccgaaaattgttgtaatatcta 137 Query: 1904 ctcaccaactattcttttaagccagggttctctctccttgtgaatttaaccaaaggaaag 1963 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136 ctcaccaactattcttttaagccagggttctctctccttgtgaatttaaccaaaggaaag 77 Query: 1964 ggtatttctttggcaaattgtac 1986 ||||||||||||||||||||||| Sbjct: 76 ggtatttctttggcaaattgtac 54 Score = 69.9 bits (35), Expect = 4e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 2005 gaagaagaagatgattcattccatgaactgagatc 2039 ||||||||||||||||||||||||||||||||||| Sbjct: 35 gaagaagaagatgattcattccatgaactgagatc 1
>emb|CT831708.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI011E19, full insert sequence Length = 941 Score = 531 bits (268), Expect = e-147 Identities = 404/448 (90%), Gaps = 1/448 (0%) Strand = Plus / Plus Query: 1342 agattccagcgcaggggcgatagttccagcaaacaaggcgaagagatcagcggaacaggg 1401 |||||||| || ||||| ||||||||||||||||| || ||||| ||| | ||||| || Sbjct: 6 agattccaatgctggggctatagttccagcaaacaaagcaaagaggtcacctgaacaagg 65 Query: 1402 gcagcgtcgaatcagacgtccgttctctgttgctgaagtggaagcacttgtgcttgcagt 1461 ||| || |||||||| ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 66 gcaacgccgaatcaggcgtccgttctctgttgccgaagtggaagcccttgtgcttgcagt 125 Query: 1462 cgaaaagcttggaactggaagatggcgagatgttaaacttcgtgcttttgataatgccaa 1521 |||||||||||||| ||||||||||||||||| |||||||| || ||||||||||| || Sbjct: 126 tgaaaagcttggaaccggaagatggcgagatgtcaaacttcgggcctttgataatgcaaa 185 Query: 1522 gcatcggacctatgttgatcttaaggacaaatggaagacgctggtgcacacggcgagcat 1581 ||| ||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 186 gcaccggacttacgttgatcttaaggacaaatggaagacgctcgtgcacacggcgagcat 245 Query: 1582 ctcgccccagcagcggcgcggtgagccggtgccgcaggatctgctcgaccgggtccttgc 1641 |||||||||||||||||| || ||||||||||| ||||| ||||||||| ||||||| || Sbjct: 246 ctcgccccagcagcggcgtggcgagccggtgccacaggagctgctcgacagggtcctggc 305 Query: 1642 ggcccagtcctattggtcccagcagcaggccaagctccagcctaagacgcccccactggc 1701 ||| ||| |||||||||| |||||||| |||||||||||||||||||||||||| ||||| Sbjct: 306 ggctcaggcctattggtctcagcagcaagccaagctccagcctaagacgcccccgctggc 365 Query: 1702 tgaggctcgcctgctcacctaataactcccatctcagcaaatggtctcttaagaaaccat 1761 |||||||| ||||||||||||||||| | |||||||| |||||||||||| |||||||| Sbjct: 366 tgaggctctcctgctcacctaataac-ctgatctcagctaatggtctcttaggaaaccat 424 Query: 1762 cccagcttttgtataaagtcagtaagtc 1789 |||||||||||||||||||||| |||| Sbjct: 425 tccagcttttgtataaagtcagtcagtc 452 Score = 135 bits (68), Expect = 8e-28 Identities = 87/92 (94%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 1889 ttgttgtaatatctactcaccaactattcttttaagccagggttctctctccttgtgaat 1948 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 525 ttgttgtaatatctactcaccaattattctttcaagccagggttctctctccttgtgaat 584 Query: 1949 ttaaccaaagg-aaagggtatttctttggcaa 1979 ||||||||||| | ||||||||||||||||| Sbjct: 585 ttaaccaaaggtatggggtatttctttggcaa 616 Score = 93.7 bits (47), Expect = 3e-15 Identities = 158/188 (84%), Gaps = 9/188 (4%) Strand = Plus / Plus Query: 2092 agcttcagattcttttgttcagttcaattcattcttt-gttaagaggatgagaaaggtgg 2150 |||||||||||||||||| || ||||||||||||||| |||| ||||||||| |||| Sbjct: 726 agcttcagattcttttgt-caattcaattcattcttttgtta---ggatgagaatggtga 781 Query: 2151 aaggataaggaggga-ggatctgtgctcccctttttcctgttttttcttcttctgtta-c 2208 || |||||||||||| ||||| |||| ||| |||| | ||||| ||| || ||||| | Sbjct: 782 aaagataaggagggatggatcattgcttcccctttt--tttttttcctttttttgttatc 839 Query: 2209 ttagttgtactattttcccttcaccaatcttgtagttattttgatcccctcaacattgta 2268 ||| |||||||| || ||||||||||||||||||||| ||| ||||||||| ||||| Sbjct: 840 ctaggtgtactatgttttcttcaccaatcttgtagttatcttggtcccctcaaagttgta 899 Query: 2269 cttgatca 2276 |||||||| Sbjct: 900 cttgatca 907 Score = 73.8 bits (37), Expect = 3e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 1793 cagtcagcccattgaaaggaggttaaggaagatagtagaaaaaaatatatata 1845 ||||||| ||||| |||||||||||||||||||| |||||||||| ||||||| Sbjct: 444 cagtcagtccattcaaaggaggttaaggaagatattagaaaaaaagatatata 496 Score = 50.1 bits (25), Expect = 0.036 Identities = 25/25 (100%) Strand = Plus / Plus Query: 2024 tccatgaactgagatctgcagtgac 2048 ||||||||||||||||||||||||| Sbjct: 651 tccatgaactgagatctgcagtgac 675
>emb|X79086.1|ZMIBP2 Z.mays IBP2 mRNA for initiator-binding protein Length = 2949 Score = 504 bits (254), Expect = e-139 Identities = 535/628 (85%), Gaps = 3/628 (0%) Strand = Plus / Plus Query: 1102 agctcctgaagatattgaattcctagaaactgttgaaactactgaacccctagcaaggat 1161 ||||||||||||||| ||||| ||||| |||| ||| |||||||||| |||||||| Sbjct: 1541 agctcctgaagatatcagtttcctggaaaccattgatactgctgaacccctcgcaaggat 1600 Query: 1162 cgcacctgcggactcgtcttccaagcacggcgaagtcgatgcctcacaggagcttgcatt 1221 |||||||| ||||||||||| ||||| || ||||| || ||||||||| ||||||| Sbjct: 1601 tgcacctgctgactcgtcttctaagcatggtgaagttgacctatcacaggagtttgcatt 1660 Query: 1222 gacacccttgacagctaattaccaggggaatgatcatgattcagtgcactctcctggggg 1281 || || || || || |||||||| | |||||||||||| |||||||| |||||||| Sbjct: 1661 aaccccattagcaatgaactaccagggcagtgatcatgattctgtgcactcccctggggg 1720 Query: 1282 catctcctcacctgagagagcttcagcaaactcgcgagctattgttccagttacacccgt 1341 | |||| || || || | || || |||||||||||||| | ||||||||| || | | Sbjct: 1721 cgtctcatcgcccgataaagtctccacaaactcgcgagctttagttccagttccagctgc 1780 Query: 1342 agattccagcgcaggggcgatagttccagcaaacaaggcgaagagatcagcggaacaggg 1401 |||| ||| ||||| || ||||||||||| || ||| | ||||| ||| | || ||||| Sbjct: 1781 agatcccaatgcaggagctatagttccagcgaataagtctaagaggtcaccagagcaggg 1840 Query: 1402 gcagcgtcgaatcagacgtccgttctctgttgctgaagtggaagcacttgtgcttgcagt 1461 ||| || ||||||| || |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 1841 gcaacgcagaatcaggcgcccgttctctgttgctgaagtagaagcacttgtgctcgcagt 1900 Query: 1462 cgaaaagcttggaactggaagatggcgagatgttaaacttcgtgcttttgataatgccaa 1521 ||||||||||||||| ||||| |||||||||||||||||||| || ||||| ||||| || Sbjct: 1901 cgaaaagcttggaaccggaaggtggcgagatgttaaacttcgcgcgtttgacaatgcgaa 1960 Query: 1522 gcatcggacctatgttgatcttaaggacaaatggaagacgctggtgcacacggcgagcat 1581 ||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1961 gcaccgtacctatgttgatcttaaggacaaatggaagacgctggtgcacaccgcgagcat 2020 Query: 1582 ctcgccccagcagcggcgcggtgagccggtgccgcaggatctgctcgaccgggtccttgc 1641 |||||| ||||||||||| || ||||||||||| ||||| ||||||||||||||||| || Sbjct: 2021 ctcgccgcagcagcggcgtggcgagccggtgcctcaggagctgctcgaccgggtcctggc 2080 Query: 1642 ggcccagtcctattggtcccagcagcaggccaagctccagcctaagacgccccc---act 1698 ||||||| |||| |||||||||||||| |||||||||||||||||||||||||| || Sbjct: 2081 ggcccaggcctactggtcccagcagcaagccaagctccagcctaagacgcccccgctgct 2140 Query: 1699 ggctgaggctcgcctgctcacctaataa 1726 ||||||||||||| |||||||||||||| Sbjct: 2141 ggctgaggctcgcttgctcacctaataa 2168 Score = 238 bits (120), Expect = 7e-59 Identities = 276/328 (84%) Strand = Plus / Plus Query: 755 catgctgcttctttggaagcaaacaagggcagcaactcaacgccattccatggatcctgt 814 ||||||| |||||||||||||||||||| | | |||||||||||||| ||| || Sbjct: 1197 catgctgtgtctttggaagcaaacaaggggactagttcaacgccattccagaaatctcgt 1256 Query: 815 aaatcgaacgattgccatgtgaaacttaagatcaaatctttcaaggtgcctgaacttcta 874 || || |||||||||||||||||||| || || ||||| ||||||||||||||||| Sbjct: 1257 gggtcaaatgattgccatgtgaaacttaaaattaagtcttttaaggtgcctgaacttctt 1316 Query: 875 attgagatcccagaaactgcttctgttggttcactgaagaaaactgttctggaggcagta 934 |||| |||||||||| ||| ||||||| ||||| |||||||||||||| |||||||| Sbjct: 1317 gttgaaatcccagaaagtgcaactgttggctcactaaagaaaactgttctcgaggcagtg 1376 Query: 935 aatgccatgcttggaggtggtctgcgtgtgggtgttcttcaccatggaaagaaaatcagg 994 | ||| || || ||||||||||| ||||| |||||||||||||||||||||||| | || Sbjct: 1377 actgcgattctcggaggtggtctacgtgttggtgttcttcaccatggaaagaaagttaga 1436 Query: 995 gatgatagcaaaaccctaatacaagctgggattggtcatgatgatatgctggacaacata 1054 ||||||| ||||| | || || ||||| |||||||| || ||||||||||||||| | Sbjct: 1437 gatgataataaaacgttgattcaggctggtattggtcaggaggatatgctggacaacctt 1496 Query: 1055 ggcttttcacttgaacccaactgtacac 1082 |||||||||||||||||||||||||||| Sbjct: 1497 ggcttttcacttgaacccaactgtacac 1524 Score = 176 bits (89), Expect = 2e-40 Identities = 209/249 (83%) Strand = Plus / Plus Query: 437 gggtgcacacattcaagcaccgccactaacaggggcttcaggcccaattgtacagctgat 496 |||||||| ||| | |||||| ||||||||| || |||||| |||||||||||||||| Sbjct: 879 gggtgcactcatcccagcaccaccactaacaaggatttcaggtccaattgtacagctgag 938 Query: 497 caaagtagggtgaagaagttcctcgcctgtaagtacaggaaagttgctcctgccagaatg 556 | |||||||| | |||||| ||| || |||||||||||||||||||||| || || | Sbjct: 939 tatagtagggtaaggaagttgctcaccagtaagtacaggaaagttgctccagcgagggtt 998 Query: 557 cacaaaggagatctttcctatagtgatgctgaccggaagccttctttccgaaacaagaaa 616 ||||| ||||||||||||||||||| ||| ||||||||||||||||| ||||| ||| Sbjct: 999 tacaaatctgatctttcctatagtgatgttgatcggaagccttctttccggaacaaaaaa 1058 Query: 617 atgtattatacgcggcaaaggacccaaaggagtacatttaagcgaaggaagatgttggat 676 ||| ||||||| || || ||||| |||||||||||||| ||||| |||||| | || ||| Sbjct: 1059 atgcattatacacgacagaggacacaaaggagtacattcaagcgtaggaagctctttgat 1118 Query: 677 cgtcattca 685 || |||||| Sbjct: 1119 cgccattca 1127 Score = 149 bits (75), Expect = 5e-32 Identities = 96/101 (95%), Gaps = 4/101 (3%) Strand = Plus / Plus Query: 1889 ttgttgtaatatctactcaccaac---tattcttttaagccagggttctctctccttgtg 1945 |||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 2321 ttgttgtaatatctactcaccaacagatattcttt-aagccaggattctctctccttgtg 2379 Query: 1946 aatttaaccaaaggaaagggtatttctttggcaaattgtac 1986 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2380 aatttaaccaaaggaaagggtatttctttggcaaattgtac 2420 Score = 127 bits (64), Expect = 2e-25 Identities = 130/152 (85%) Strand = Plus / Plus Query: 43 gaatgaggttccaaaggcaaagtctgaggctgtggacaaggagccctcgatgataagctg 102 |||||||| ||| ||||| ||||||||||| ||||||||| |||| ||||| ||||| Sbjct: 491 gaatgaggatcctaaggcgaagtctgaggcccaggacaaggaatcctccatgatcagctg 550 Query: 103 taccaaggctgacttgggtagtaatttcggggcgatcgcggataggtggtcgcctgaatc 162 |||||||||||| ||||| ||||||| || | ||| || |||||||||||||||||||| Sbjct: 551 taccaaggctgaactgggttgtaattttggtgtgattgcagataggtggtcgcctgaatc 610 Query: 163 cgtggagtcaggggccttcactggggatgcag 194 |||||| ||||| |||||||| || ||||||| Sbjct: 611 cgtggaatcaggagccttcacaggagatgcag 642 Score = 93.7 bits (47), Expect = 3e-15 Identities = 56/59 (94%) Strand = Plus / Plus Query: 269 atggatgttgatgtgaagccgcctcctttggtcagctctgacagcaccggcgagatgcc 327 |||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 717 atggatgtggatgtcaagcctcctcctttggtcagctctgacagcaccggcgagatgcc 775 Score = 58.0 bits (29), Expect = 1e-04 Identities = 35/37 (94%) Strand = Plus / Plus Query: 2092 agcttcagattcttttgttcagttcaattcattcttt 2128 ||||||||||||||||||||| || |||||||||||| Sbjct: 2739 agcttcagattcttttgttcaattaaattcattcttt 2775 Score = 52.0 bits (26), Expect = 0.009 Identities = 32/34 (94%) Strand = Plus / Plus Query: 1764 cagcttttgtataaagtcagtaagtcagccagtc 1797 |||| ||||||||||||||||||||||| ||||| Sbjct: 2209 cagcctttgtataaagtcagtaagtcagtcagtc 2242
>dbj|AK105037.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C07, full insert sequence Length = 1275 Score = 484 bits (244), Expect = e-133 Identities = 360/396 (90%), Gaps = 2/396 (0%) Strand = Plus / Plus Query: 1395 aacaggggcagcgtcgaatcagacgtccgttctctgttgctgaagtggaagcacttgtgc 1454 |||| ||||| || |||||||| ||||||||||||||||| ||||||||||| ||||||| Sbjct: 1 aacaagggcaacgccgaatcaggcgtccgttctctgttgccgaagtggaagcccttgtgc 60 Query: 1455 ttgcagtcgaaaagcttggaactggaagatggcgagatgttaaacttcgtg-cttttgat 1513 ||||||| |||||||||||||| ||||||||||||||||| |||||||| | | |||||| Sbjct: 61 ttgcagttgaaaagcttggaaccggaagatggcgagatgtcaaacttcggggcctttgat 120 Query: 1514 aatgccaagcatcggacctatgttgatcttaaggacaaatggaagacgctggtgcacacg 1573 ||||| ||||| ||||| || ||||||||||||||||||||||||||||| ||||||||| Sbjct: 121 aatgcaaagcaccggacttacgttgatcttaaggacaaatggaagacgctcgtgcacacg 180 Query: 1574 gcgagcatctcgccccagcagcggcgcggtgagccggtgccgcaggatctgctcgaccgg 1633 |||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||| || Sbjct: 181 gcgagcatctcgccccagcagcggcgtggcgagccggtgccacaggagctgctcgacagg 240 Query: 1634 gtccttgcggcccagtcctattggtcccagcagcaggccaagctccagcctaagacgccc 1693 ||||| ||||| ||| |||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 241 gtcctggcggctcaggcctattggtctcagcagcaagccaagctccagcctaagacgccc 300 Query: 1694 ccactggctgaggctcgcctgctcacctaataactcccatctcagcaaatggtctcttaa 1753 || ||||||||||||| ||||||||||||||||| | |||||||| |||||||||||| Sbjct: 301 ccgctggctgaggctctcctgctcacctaataac-ctgatctcagctaatggtctcttag 359 Query: 1754 gaaaccatcccagcttttgtataaagtcagtaagtc 1789 |||||||| |||||||||||||||||||||| |||| Sbjct: 360 gaaaccattccagcttttgtataaagtcagtcagtc 395 Score = 73.8 bits (37), Expect = 3e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 1793 cagtcagcccattgaaaggaggttaaggaagatagtagaaaaaaatatatata 1845 ||||||| ||||| |||||||||||||||||||| |||||||||| ||||||| Sbjct: 387 cagtcagtccattcaaaggaggttaaggaagatattagaaaaaaagatatata 439 Score = 61.9 bits (31), Expect = 1e-05 Identities = 37/39 (94%) Strand = Plus / Plus Query: 1889 ttgttgtaatatctactcaccaactattcttttaagcca 1927 ||||||||||||||||||||||| |||||||| |||||| Sbjct: 468 ttgttgtaatatctactcaccaattattctttcaagcca 506
>emb|X79085.1|ZMIBP1 Z.mays IBP1 mRNA for initiator-binding protein Length = 2935 Score = 406 bits (205), Expect = e-109 Identities = 325/365 (89%) Strand = Plus / Plus Query: 1362 tagttccagcaaacaaggcgaagagatcagcggaacaggggcagcgtcgaatcagacgtc 1421 ||||||||||||| ||| | ||||| ||| | || ||||| || || ||||||| || | Sbjct: 1843 tagttccagcaaataagactaagaggtcaccagagcagggacaccgcagaatcaggcggc 1902 Query: 1422 cgttctctgttgctgaagtggaagcacttgtgcttgcagtcgaaaagcttggaactggaa 1481 ||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||| Sbjct: 1903 cgttctctgttgctgaagtagaagcacttgtgctcgcagtcgaaaagcttggaaccggaa 1962 Query: 1482 gatggcgagatgttaaacttcgtgcttttgataatgccaagcatcggacctatgttgatc 1541 | |||||||||||||||||||| |||||||| ||||| ||||| || ||||| ||||| | Sbjct: 1963 ggtggcgagatgttaaacttcgcgcttttgacaatgcaaagcaccgtacctacgttgacc 2022 Query: 1542 ttaaggacaaatggaagacgctggtgcacacggcgagcatctcgccccagcagcggcgcg 1601 ||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||| | Sbjct: 2023 ttaaggacaaatggaagacgctggtacacacagcgagcatctcgccgcagcagcggcgtg 2082 Query: 1602 gtgagccggtgccgcaggatctgctcgaccgggtccttgcggcccagtcctattggtccc 1661 | ||||||||||| ||||| ||||||||||||||||| ||||||||| |||| ||||||| Sbjct: 2083 gcgagccggtgcctcaggagctgctcgaccgggtcctggcggcccaggcctactggtccc 2142 Query: 1662 agcagcaggccaagctccagcctaagacgcccccactggctgaggctcgcctgctcacct 1721 ||||||| |||||||||||||| ||||||||| | ||||||||||||||| |||||||| Sbjct: 2143 agcagcaagccaagctccagccgaagacgccctcgctggctgaggctcgcttgctcaccc 2202 Query: 1722 aataa 1726 ||||| Sbjct: 2203 aataa 2207 Score = 248 bits (125), Expect = 8e-62 Identities = 269/317 (84%) Strand = Plus / Plus Query: 764 tctttggaagcaaacaagggcagcaactcaacgccattccatggatcctgtaaatcgaac 823 |||||||||||||||||||| | || |||| ||||||||| ||| ||| || || Sbjct: 1257 tctttggaagcaaacaaggggactaattcaatgccattccagaaatcttgtgggtcaaat 1316 Query: 824 gattgccatgtgaaacttaagatcaaatctttcaaggtgcctgaacttctaattgagatc 883 |||||| |||||||||||| || || ||||| || |||||||||||||| |||| ||| Sbjct: 1317 gattgctatgtgaaacttagaattaagtcttttaacgtgcctgaacttcttgttgaaatc 1376 Query: 884 ccagaaactgcttctgttggttcactgaagaaaactgttctggaggcagtaaatgccatg 943 ||||| | ||| ||||||| ||||| |||||||||||||| |||||||| | ||| || Sbjct: 1377 ccagacagtgcaactgttggctcactaaagaaaactgttctcgaggcagtgactgcgatt 1436 Query: 944 cttggaggtggtctgcgtgtgggtgttcttcaccatggaaagaaaatcagggatgatagc 1003 ||||||||||| || ||||| |||||||||||||||||||||||| |||| |||||||| Sbjct: 1437 cttggaggtggcctacgtgttggtgttcttcaccatggaaagaaagtcagagatgatagt 1496 Query: 1004 aaaaccctaatacaagctgggattggtcatgatgatatgctggacaacataggcttttca 1063 ||||| |||| || |||||||||||||| |||||||||||||||||| | ||||||||| Sbjct: 1497 aaaacgttaattcaggctgggattggtcaggatgatatgctggacaaccttggcttttca 1556 Query: 1064 cttgaacccaactgtac 1080 ||||||||||||||||| Sbjct: 1557 cttgaacccaactgtac 1573 Score = 119 bits (60), Expect = 5e-23 Identities = 87/94 (92%), Gaps = 4/94 (4%) Strand = Plus / Plus Query: 1889 ttgttgtaatatctactcaccaac---tattcttttaagccagggttctctctccttgtg 1945 |||||||||||||||||||||| | |||||||| |||||||| ||||||||||||||| Sbjct: 2363 ttgttgtaatatctactcaccaccggttattcttt-aagccaggattctctctccttgtg 2421 Query: 1946 aatttaaccaaaggaaagggtatttctttggcaa 1979 |||||||||||||||||||| ||||||||||||| Sbjct: 2422 aatttaaccaaaggaaagggcatttctttggcaa 2455 Score = 103 bits (52), Expect = 3e-18 Identities = 127/152 (83%) Strand = Plus / Plus Query: 43 gaatgaggttccaaaggcaaagtctgaggctgtggacaaggagccctcgatgataagctg 102 |||||||| ||| ||||| |||||||||| ||||||||| |||| ||||| |||| Sbjct: 548 gaatgaggatcctaaggcgaagtctgaggtccaggacaaggaatcctccatgatcagcta 607 Query: 103 taccaaggctgacttgggtagtaatttcggggcgatcgcggataggtggtcgcctgaatc 162 ||| |||||||| |||||| ||||||| || | |||||| || ||||||||||||||||| Sbjct: 608 tacgaaggctgaattgggttgtaattttggtgtgatcgcagacaggtggtcgcctgaatc 667 Query: 163 cgtggagtcaggggccttcactggggatgcag 194 |||||| ||||| |||| ||| || ||||||| Sbjct: 668 cgtggaatcaggagcctgcacaggagatgcag 699 Score = 101 bits (51), Expect = 1e-17 Identities = 57/59 (96%) Strand = Plus / Plus Query: 269 atggatgttgatgtgaagccgcctcctttggtcagctctgacagcaccggcgagatgcc 327 |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 774 atggatgtggatgtcaagccgcctcctttggtcagctctgacagcaccggcgagatgcc 832 Score = 97.6 bits (49), Expect = 2e-16 Identities = 186/231 (80%), Gaps = 3/231 (1%) Strand = Plus / Plus Query: 437 gggtgcacacattcaagcaccgccactaacaggggcttcaggcccaattgtacagctgat 496 |||||||| ||| | |||||||||||||||| || |||| ||||||||| |||||| Sbjct: 936 gggtgcactcatccgagcaccgccactaacaaggatttcacatccaattgtaaagctgag 995 Query: 497 caaagtagggtgaagaagttcctcgcctgtaagtacaggaaagttgctcctgccagaatg 556 | | |||||| | |||| | ||| | ||||| |||||||||||||||| || || || Sbjct: 996 tataatagggtaaggaagctgctcactagtaagcacaggaaagttgctccagcgaggatt 1055 Query: 557 cacaaaggagatctttcctatagtgatgctgaccggaagccttctttccgaaacaagaaa 616 |||||| ||||||||||||||||||| || ||||||||||||||||| |||| ||| Sbjct: 1056 cacaaatctgatctttcctatagtgatgtcgagcggaagccttctttccggtacaaaaaa 1115 Query: 617 atgtattatacgcggcaaaggacccaaaggagtacatttaagcgaaggaag 667 ||| |||| || || ||||| |||||||||||||| ||||| |||||| Sbjct: 1116 atg---catacacgacagaggacacaaaggagtacattcaagcggaggaag 1163 Score = 85.7 bits (43), Expect = 7e-13 Identities = 121/147 (82%) Strand = Plus / Plus Query: 1134 ttgaaactactgaacccctagcaaggatcgcacctgcggactcgtcttccaagcacggcg 1193 |||| ||||| |||||||| ||||||||| ||||||| ||||||||||| |||| || | Sbjct: 1624 ttgatactaccgaacccctcgcaaggatcacacctgctgactcgtcttctaagcttggtg 1683 Query: 1194 aagtcgatgcctcacaggagcttgcattgacacccttgacagctaattaccaggggaatg 1253 |||| || | ||||||||||||||||| || || || || || |||||||| | || Sbjct: 1684 aagttgacgtatcacaggagcttgcattaaccccattagcaatgaactaccagggcagtg 1743 Query: 1254 atcatgattcagtgcactctcctgggg 1280 |||||||||| |||||||| ||||||| Sbjct: 1744 atcatgattccgtgcactcccctgggg 1770 Score = 65.9 bits (33), Expect = 6e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 2092 agcttcagattcttttgttcagttcaattcattcttt 2128 |||||||||||||||||||||||| |||||||||||| Sbjct: 2831 agcttcagattcttttgttcagttaaattcattcttt 2867 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1764 cagcttttgtataaagtcagtaagtca 1790 |||| |||||||||||||||||||||| Sbjct: 2247 cagcctttgtataaagtcagtaagtca 2273
>gb|AY109366.1| Zea mays CL2161_2 mRNA sequence Length = 3021 Score = 406 bits (205), Expect = e-109 Identities = 325/365 (89%) Strand = Plus / Plus Query: 1362 tagttccagcaaacaaggcgaagagatcagcggaacaggggcagcgtcgaatcagacgtc 1421 ||||||||||||| ||| | ||||| ||| | || ||||| || || ||||||| || | Sbjct: 1843 tagttccagcaaataagactaagaggtcaccagagcagggacaccgcagaatcaggcggc 1902 Query: 1422 cgttctctgttgctgaagtggaagcacttgtgcttgcagtcgaaaagcttggaactggaa 1481 ||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||| Sbjct: 1903 cgttctctgttgctgaagtagaagcacttgtgctcgcagtcgaaaagcttggaaccggaa 1962 Query: 1482 gatggcgagatgttaaacttcgtgcttttgataatgccaagcatcggacctatgttgatc 1541 | |||||||||||||||||||| |||||||| ||||| ||||| || ||||| ||||| | Sbjct: 1963 ggtggcgagatgttaaacttcgcgcttttgacaatgcaaagcaccgtacctacgttgacc 2022 Query: 1542 ttaaggacaaatggaagacgctggtgcacacggcgagcatctcgccccagcagcggcgcg 1601 ||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||| | Sbjct: 2023 ttaaggacaaatggaagacgctggtacacacagcgagcatctcgccgcagcagcggcgtg 2082 Query: 1602 gtgagccggtgccgcaggatctgctcgaccgggtccttgcggcccagtcctattggtccc 1661 | ||||||||||| ||||| ||||||||||||||||| ||||||||| |||| ||||||| Sbjct: 2083 gcgagccggtgcctcaggagctgctcgaccgggtcctggcggcccaggcctactggtccc 2142 Query: 1662 agcagcaggccaagctccagcctaagacgcccccactggctgaggctcgcctgctcacct 1721 ||||||| |||||||||||||| ||||||||| | ||||||||||||||| |||||||| Sbjct: 2143 agcagcaagccaagctccagccgaagacgccctcgctggctgaggctcgcttgctcaccc 2202 Query: 1722 aataa 1726 ||||| Sbjct: 2203 aataa 2207 Score = 248 bits (125), Expect = 8e-62 Identities = 269/317 (84%) Strand = Plus / Plus Query: 764 tctttggaagcaaacaagggcagcaactcaacgccattccatggatcctgtaaatcgaac 823 |||||||||||||||||||| | || |||| ||||||||| ||| ||| || || Sbjct: 1257 tctttggaagcaaacaaggggactaattcaatgccattccagaaatcttgtgggtcaaat 1316 Query: 824 gattgccatgtgaaacttaagatcaaatctttcaaggtgcctgaacttctaattgagatc 883 |||||| |||||||||||| || || ||||| || |||||||||||||| |||| ||| Sbjct: 1317 gattgctatgtgaaacttagaattaagtcttttaacgtgcctgaacttcttgttgaaatc 1376 Query: 884 ccagaaactgcttctgttggttcactgaagaaaactgttctggaggcagtaaatgccatg 943 ||||| | ||| ||||||| ||||| |||||||||||||| |||||||| | ||| || Sbjct: 1377 ccagacagtgcaactgttggctcactaaagaaaactgttctcgaggcagtgactgcgatt 1436 Query: 944 cttggaggtggtctgcgtgtgggtgttcttcaccatggaaagaaaatcagggatgatagc 1003 ||||||||||| || ||||| |||||||||||||||||||||||| |||| |||||||| Sbjct: 1437 cttggaggtggcctacgtgttggtgttcttcaccatggaaagaaagtcagagatgatagt 1496 Query: 1004 aaaaccctaatacaagctgggattggtcatgatgatatgctggacaacataggcttttca 1063 ||||| |||| || |||||||||||||| |||||||||||||||||| | ||||||||| Sbjct: 1497 aaaacgttaattcaggctgggattggtcaggatgatatgctggacaaccttggcttttca 1556 Query: 1064 cttgaacccaactgtac 1080 ||||||||||||||||| Sbjct: 1557 cttgaacccaactgtac 1573 Score = 119 bits (60), Expect = 5e-23 Identities = 87/94 (92%), Gaps = 4/94 (4%) Strand = Plus / Plus Query: 1889 ttgttgtaatatctactcaccaac---tattcttttaagccagggttctctctccttgtg 1945 |||||||||||||||||||||| | |||||||| |||||||| ||||||||||||||| Sbjct: 2363 ttgttgtaatatctactcaccaccggttattcttt-aagccaggattctctctccttgtg 2421 Query: 1946 aatttaaccaaaggaaagggtatttctttggcaa 1979 |||||||||||||||||||| ||||||||||||| Sbjct: 2422 aatttaaccaaaggaaagggcatttctttggcaa 2455 Score = 101 bits (51), Expect = 1e-17 Identities = 57/59 (96%) Strand = Plus / Plus Query: 269 atggatgttgatgtgaagccgcctcctttggtcagctctgacagcaccggcgagatgcc 327 |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 774 atggatgtggatgtcaagccgcctcctttggtcagctctgacagcaccggcgagatgcc 832 Score = 85.7 bits (43), Expect = 7e-13 Identities = 121/147 (82%) Strand = Plus / Plus Query: 1134 ttgaaactactgaacccctagcaaggatcgcacctgcggactcgtcttccaagcacggcg 1193 |||| ||||| |||||||| ||||||||| ||||||| ||||||||||| |||| || | Sbjct: 1624 ttgatactaccgaacccctcgcaaggatcacacctgctgactcgtcttctaagcttggtg 1683 Query: 1194 aagtcgatgcctcacaggagcttgcattgacacccttgacagctaattaccaggggaatg 1253 |||| || | ||||||||||||||||| || || || || || |||||||| | || Sbjct: 1684 aagttgacgtatcacaggagcttgcattaaccccattagcaatgaactaccagggcagtg 1743 Query: 1254 atcatgattcagtgcactctcctgggg 1280 |||||||||| |||||||| ||||||| Sbjct: 1744 atcatgattccgtgcactcccctgggg 1770 Score = 83.8 bits (42), Expect = 3e-12 Identities = 138/170 (81%) Strand = Plus / Plus Query: 437 gggtgcacacattcaagcaccgccactaacaggggcttcaggcccaattgtacagctgat 496 |||||||| ||| | |||||||||||||||| || |||| ||||||||| |||||| Sbjct: 936 gggtgcactcatccgagcaccgccactaacaaggatttcacatccaattgtaaagctgag 995 Query: 497 caaagtagggtgaagaagttcctcgcctgtaagtacaggaaagttgctcctgccagaatg 556 | | |||||| | |||| | ||| | ||||| |||||||||||||||| || || || Sbjct: 996 tataatagggtaaggaagctgctcactagtaagcacaggaaagttgctccagcgaggatt 1055 Query: 557 cacaaaggagatctttcctatagtgatgctgaccggaagccttctttccg 606 |||||| ||||||||||||||||||| || ||||||||||||||||| Sbjct: 1056 cacaaatctgatctttcctatagtgatgtcgagcggaagccttctttccg 1105 Score = 67.9 bits (34), Expect = 2e-07 Identities = 37/38 (97%) Strand = Plus / Plus Query: 2092 agcttcagattcttttgttcagttcaattcattctttg 2129 |||||||||||||||||||||||| ||||||||||||| Sbjct: 2832 agcttcagattcttttgttcagttaaattcattctttg 2869 Score = 58.0 bits (29), Expect = 1e-04 Identities = 44/49 (89%) Strand = Plus / Plus Query: 146 aggtggtcgcctgaatccgtggagtcaggggccttcactggggatgcag 194 ||||||||||||||||||||||| ||||| |||| ||| || ||||||| Sbjct: 651 aggtggtcgcctgaatccgtggaatcaggagcctgcacaggagatgcag 699 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Plus Query: 2024 tccatgaactgagatctgcagtg 2046 ||||||||||||||||||||||| Sbjct: 2488 tccatgaactgagatctgcagtg 2510 Score = 42.1 bits (21), Expect = 8.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 635 aggacccaaaggagtacatttaagcgaaggaag 667 ||||| |||||||||||||| ||||| |||||| Sbjct: 1131 aggacacaaaggagtacattcaagcggaggaag 1163
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 319 bits (161), Expect = 3e-83 Identities = 225/245 (91%), Gaps = 1/245 (0%) Strand = Plus / Plus Query: 1545 aggacaaatggaagacgctggtgcacacggcgagcatctcgccccagcagcggcgcggtg 1604 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || | Sbjct: 9221966 aggacaaatggaagacgctcgtgcacacggcgagcatctcgccccagcagcggcgtggcg 9222025 Query: 1605 agccggtgccgcaggatctgctcgaccgggtccttgcggcccagtcctattggtcccagc 1664 |||||||||| ||||| ||||||||| ||||||| ||||| ||| |||||||||| |||| Sbjct: 9222026 agccggtgccacaggagctgctcgacagggtcctggcggctcaggcctattggtctcagc 9222085 Query: 1665 agcaggccaagctccagcctaagacgcccccactggctgaggctcgcctgctcacctaat 1724 |||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 9222086 agcaagccaagctccagcctaagacgcccccgctggctgaggctctcctgctcacctaat 9222145 Query: 1725 aactcccatctcagcaaatggtctcttaagaaaccatcccagcttttgtataaagtcagt 1784 ||| | |||||||| |||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 9222146 aac-ctgatctcagctaatggtctcttaggaaaccattccagcttttgtataaagtcagt 9222204 Query: 1785 aagtc 1789 |||| Sbjct: 9222205 cagtc 9222209 Score = 289 bits (146), Expect = 2e-74 Identities = 281/326 (86%) Strand = Plus / Plus Query: 1157 aggatcgcacctgcggactcgtcttccaagcacggcgaagtcgatgcctcacaggagctt 1216 ||||| |||||||| ||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 9220813 aggattgcacctgctgactcatcttccaagcatggtgaagttgatgcttcacaggagctt 9220872 Query: 1217 gcattgacacccttgacagctaattaccaggggaatgatcatgattcagtgcactctcct 1276 |||||| ||||||| |||| || ||||| |||| ||||||||| | |||||||||||| Sbjct: 9220873 gcattggcacccttatcagcaaactaccaagggagtgatcatgactttgtgcactctcct 9220932 Query: 1277 gggggcatctcctcacctgagagagcttcagcaaactcgcgagctattgttccagttaca 1336 |||||||| || |||||||| | || || |||||||||||||||||||||||||||| Sbjct: 9220933 gggggcatgtcttcacctgataaggcatccacaaactcgcgagctattgttccagttact 9220992 Query: 1337 cccgtagattccagcgcaggggcgatagttccagcaaacaaggcgaagagatcagcggaa 1396 || | |||||||| || ||||| ||||||||||||||||| || ||||| ||| | ||| Sbjct: 9220993 cctgcagattccaatgctggggctatagttccagcaaacaaagcaaagaggtcacctgaa 9221052 Query: 1397 caggggcagcgtcgaatcagacgtccgttctctgttgctgaagtggaagcacttgtgctt 1456 || ||||| || |||||||| ||||||||||||||||| ||||||||||| ||||||||| Sbjct: 9221053 caagggcaacgccgaatcaggcgtccgttctctgttgccgaagtggaagcccttgtgctt 9221112 Query: 1457 gcagtcgaaaagcttggaactggaag 1482 ||||| |||||||||||||| ||||| Sbjct: 9221113 gcagttgaaaagcttggaaccggaag 9221138 Score = 244 bits (123), Expect = 1e-60 Identities = 237/275 (86%) Strand = Plus / Plus Query: 56 aaggcaaagtctgaggctgtggacaaggagccctcgatgataagctgtaccaaggctgac 115 ||||| ||||| ||||| |||||||||| |||| ||||||||||| ||||||||||| Sbjct: 9219234 aaggccaagtccgaggcactggacaaggaatcctcaatgataagctgcaccaaggctgaa 9219293 Query: 116 ttgggtagtaatttcggggcgatcgcggataggtggtcgcctgaatccgtggagtcaggg 175 |||||| ||||||| | |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9219294 ttgggttgtaattttgcagcgatcgctgataggtggtcgcctgaatccgtggagtcaggg 9219353 Query: 176 gccttcactggggatgcagcggcaaatgtgatggcattggccgcagcagccttcaacaag 235 |||||||||||||||||||| |||| || |||| | || || ||| |||| ||||| Sbjct: 9219354 gccttcactggggatgcagctgcaattgcgatgccggctaccacatcaggcttccacaag 9219413 Query: 236 aacgcccctgacatgtacaatcttctcgaccccatggatgttgatgtgaagccgcctcct 295 || || || || ||||| ||||| ||||| || |||||||| ||||| |||||||||||| Sbjct: 9219414 aatgctccagatatgtataatctgctcgatccaatggatgtggatgtaaagccgcctcct 9219473 Query: 296 ttggtcagctctgacagcaccggcgagatgccgtt 330 |||||||||||||||||||||||||| |||||||| Sbjct: 9219474 ttggtcagctctgacagcaccggcgaaatgccgtt 9219508 Score = 210 bits (106), Expect = 2e-50 Identities = 142/154 (92%) Strand = Plus / Plus Query: 428 aaatcttccgggtgcacacattcaagcaccgccactaacaggggcttcaggcccaattgt 487 ||||||||||||||||| ||| | |||||||| ||||||||||| ||||||||||||||| Sbjct: 9219603 aaatcttccgggtgcactcatccgagcaccgctactaacaggggtttcaggcccaattgt 9219662 Query: 488 acagctgatcaaagtagggtgaagaagttcctcgcctgtaagtacaggaaagttgctcct 547 ||||||| ||| |||||||| |||||||| |||||||||||| |||||||||||||||| Sbjct: 9219663 acagctggtcatagtagggtaaagaagttgctcgcctgtaagcacaggaaagttgctcca 9219722 Query: 548 gccagaatgcacaaaggagatctttcctatagtg 581 ||||| |||||||||||||||||||||||||||| Sbjct: 9219723 gccaggatgcacaaaggagatctttcctatagtg 9219756 Score = 198 bits (100), Expect = 6e-47 Identities = 208/244 (85%) Strand = Plus / Plus Query: 912 agaaaactgttctggaggcagtaaatgccatgcttggaggtggtctgcgtgtgggtgttc 971 ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | Sbjct: 9220484 agaaaactgttctggaggcagtaaatgccatacttggaggtggtctgcgtgtcggtgtgc 9220543 Query: 972 ttcaccatggaaagaaaatcagggatgatagcaaaaccctaatacaagctgggattggtc 1031 | || ||||| |||||| |||| ||||||| |||||| |||| || ||||||||| || Sbjct: 9220544 tccatcatgggaagaaagtcagagatgataataaaaccttaatgcaggctgggatttctc 9220603 Query: 1032 atgatgatatgctggacaacataggcttttcacttgaacccaactgtacacggcattcat 1091 ||||||| | ||||||||| | || ||||| ||||||||||| ||| ||| |||| | | Sbjct: 9220604 atgatgaggtactggacaacctgggtttttctcttgaacccaattgtgcaccgcatccgt 9220663 Query: 1092 cacaagttgcagctcctgaagatattgaattcctagaaactgttgaaactactgaacccc 1151 ||||| | || |||| ||||||| ||||||| | ||||||||||| ||||||||||||| Sbjct: 9220664 cacaactctcacctcccgaagataatgaattcatggaaactgttgatactactgaacccc 9220723 Query: 1152 tagc 1155 |||| Sbjct: 9220724 tagc 9220727 Score = 137 bits (69), Expect = 2e-28 Identities = 96/105 (91%) Strand = Plus / Plus Query: 581 gatgctgaccggaagccttctttccgaaacaagaaaatgtattatacgcggcaaaggacc 640 |||| ||||||||||||||||||||| |||||||||||||||||||| || |||||||| Sbjct: 9219870 gatgttgaccggaagccttctttccgcaacaagaaaatgtattatacacgacaaaggaca 9219929 Query: 641 caaaggagtacatttaagcgaaggaagatgttggatcgtcattca 685 |||||||| ||||| ||||| ||||||||||| |||||||||||| Sbjct: 9219930 caaaggagcacattcaagcggaggaagatgtttgatcgtcattca 9219974 Score = 135 bits (68), Expect = 8e-28 Identities = 87/92 (94%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 1889 ttgttgtaatatctactcaccaactattcttttaagccagggttctctctccttgtgaat 1948 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 9222282 ttgttgtaatatctactcaccaattattctttcaagccagggttctctctccttgtgaat 9222341 Query: 1949 ttaaccaaagg-aaagggtatttctttggcaa 1979 ||||||||||| | ||||||||||||||||| Sbjct: 9222342 ttaaccaaaggtatggggtatttctttggcaa 9222373 Score = 123 bits (62), Expect = 3e-24 Identities = 74/78 (94%) Strand = Plus / Plus Query: 836 aaacttaagatcaaatctttcaaggtgcctgaacttctaattgagatcccagaaactgct 895 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9220286 aaacttaggatcaagtctttcaaggtgcctgaacttctaattgagatcccagaaactgcg 9220345 Query: 896 tctgttggttcactgaag 913 ||||||||||||||||| Sbjct: 9220346 actgttggttcactgaag 9220363 Score = 91.7 bits (46), Expect = 1e-14 Identities = 159/189 (84%), Gaps = 12/189 (6%) Strand = Plus / Plus Query: 2092 agcttcagattcttttgttcagttcaattcattcttt-gttaagaggatgagaaaggtgg 2150 |||||||||||||||||| || ||||||||||||||| |||| ||||||||| |||| Sbjct: 9222483 agcttcagattcttttgt-caattcaattcattcttttgtta---ggatgagaatggtga 9222538 Query: 2151 aaggataaggaggga-ggatctgtgct-cccctttttcctgttttttcttcttctgtta- 2207 || |||||||||||| ||||| |||| ||||||||| ||||| ||| || ||||| Sbjct: 9222539 aaagataaggagggatggatcattgcttccccttttt----tttttcctttttttgttat 9222594 Query: 2208 cttagttgtactattttcccttcaccaatcttgtagttattttgatcccctcaacattgt 2267 | ||| |||||||| || ||||||||||||||||||||| ||| ||||||||| |||| Sbjct: 9222595 cctaggtgtactatgttttcttcaccaatcttgtagttatcttggtcccctcaaagttgt 9222654 Query: 2268 acttgatca 2276 ||||||||| Sbjct: 9222655 acttgatca 9222663 Score = 77.8 bits (39), Expect = 2e-10 Identities = 60/67 (89%) Strand = Plus / Plus Query: 1481 agatggcgagatgttaaacttcgtgcttttgataatgccaagcatcggacctatgttgat 1540 |||||||||||||| |||||||| || ||||||||||| ||||| ||||| || |||||| Sbjct: 9221209 agatggcgagatgtcaaacttcgggcctttgataatgcaaagcaccggacttacgttgat 9221268 Query: 1541 cttaagg 1547 ||||||| Sbjct: 9221269 cttaagg 9221275 Score = 73.8 bits (37), Expect = 3e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 1793 cagtcagcccattgaaaggaggttaaggaagatagtagaaaaaaatatatata 1845 ||||||| ||||| |||||||||||||||||||| |||||||||| ||||||| Sbjct: 9222201 cagtcagtccattcaaaggaggttaaggaagatattagaaaaaaagatatata 9222253 Score = 50.1 bits (25), Expect = 0.036 Identities = 25/25 (100%) Strand = Plus / Plus Query: 2024 tccatgaactgagatctgcagtgac 2048 ||||||||||||||||||||||||| Sbjct: 9222408 tccatgaactgagatctgcagtgac 9222432
>gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032O19, from chromosome 3, complete sequence Length = 142248 Score = 319 bits (161), Expect = 3e-83 Identities = 225/245 (91%), Gaps = 1/245 (0%) Strand = Plus / Minus Query: 1545 aggacaaatggaagacgctggtgcacacggcgagcatctcgccccagcagcggcgcggtg 1604 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || | Sbjct: 62258 aggacaaatggaagacgctcgtgcacacggcgagcatctcgccccagcagcggcgtggcg 62199 Query: 1605 agccggtgccgcaggatctgctcgaccgggtccttgcggcccagtcctattggtcccagc 1664 |||||||||| ||||| ||||||||| ||||||| ||||| ||| |||||||||| |||| Sbjct: 62198 agccggtgccacaggagctgctcgacagggtcctggcggctcaggcctattggtctcagc 62139 Query: 1665 agcaggccaagctccagcctaagacgcccccactggctgaggctcgcctgctcacctaat 1724 |||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 62138 agcaagccaagctccagcctaagacgcccccgctggctgaggctctcctgctcacctaat 62079 Query: 1725 aactcccatctcagcaaatggtctcttaagaaaccatcccagcttttgtataaagtcagt 1784 ||| | |||||||| |||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 62078 aac-ctgatctcagctaatggtctcttaggaaaccattccagcttttgtataaagtcagt 62020 Query: 1785 aagtc 1789 |||| Sbjct: 62019 cagtc 62015 Score = 289 bits (146), Expect = 2e-74 Identities = 281/326 (86%) Strand = Plus / Minus Query: 1157 aggatcgcacctgcggactcgtcttccaagcacggcgaagtcgatgcctcacaggagctt 1216 ||||| |||||||| ||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 63411 aggattgcacctgctgactcatcttccaagcatggtgaagttgatgcttcacaggagctt 63352 Query: 1217 gcattgacacccttgacagctaattaccaggggaatgatcatgattcagtgcactctcct 1276 |||||| ||||||| |||| || ||||| |||| ||||||||| | |||||||||||| Sbjct: 63351 gcattggcacccttatcagcaaactaccaagggagtgatcatgactttgtgcactctcct 63292 Query: 1277 gggggcatctcctcacctgagagagcttcagcaaactcgcgagctattgttccagttaca 1336 |||||||| || |||||||| | || || |||||||||||||||||||||||||||| Sbjct: 63291 gggggcatgtcttcacctgataaggcatccacaaactcgcgagctattgttccagttact 63232 Query: 1337 cccgtagattccagcgcaggggcgatagttccagcaaacaaggcgaagagatcagcggaa 1396 || | |||||||| || ||||| ||||||||||||||||| || ||||| ||| | ||| Sbjct: 63231 cctgcagattccaatgctggggctatagttccagcaaacaaagcaaagaggtcacctgaa 63172 Query: 1397 caggggcagcgtcgaatcagacgtccgttctctgttgctgaagtggaagcacttgtgctt 1456 || ||||| || |||||||| ||||||||||||||||| ||||||||||| ||||||||| Sbjct: 63171 caagggcaacgccgaatcaggcgtccgttctctgttgccgaagtggaagcccttgtgctt 63112 Query: 1457 gcagtcgaaaagcttggaactggaag 1482 ||||| |||||||||||||| ||||| Sbjct: 63111 gcagttgaaaagcttggaaccggaag 63086 Score = 244 bits (123), Expect = 1e-60 Identities = 237/275 (86%) Strand = Plus / Minus Query: 56 aaggcaaagtctgaggctgtggacaaggagccctcgatgataagctgtaccaaggctgac 115 ||||| ||||| ||||| |||||||||| |||| ||||||||||| ||||||||||| Sbjct: 64990 aaggccaagtccgaggcactggacaaggaatcctcaatgataagctgcaccaaggctgaa 64931 Query: 116 ttgggtagtaatttcggggcgatcgcggataggtggtcgcctgaatccgtggagtcaggg 175 |||||| ||||||| | |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 64930 ttgggttgtaattttgcagcgatcgctgataggtggtcgcctgaatccgtggagtcaggg 64871 Query: 176 gccttcactggggatgcagcggcaaatgtgatggcattggccgcagcagccttcaacaag 235 |||||||||||||||||||| |||| || |||| | || || ||| |||| ||||| Sbjct: 64870 gccttcactggggatgcagctgcaattgcgatgccggctaccacatcaggcttccacaag 64811 Query: 236 aacgcccctgacatgtacaatcttctcgaccccatggatgttgatgtgaagccgcctcct 295 || || || || ||||| ||||| ||||| || |||||||| ||||| |||||||||||| Sbjct: 64810 aatgctccagatatgtataatctgctcgatccaatggatgtggatgtaaagccgcctcct 64751 Query: 296 ttggtcagctctgacagcaccggcgagatgccgtt 330 |||||||||||||||||||||||||| |||||||| Sbjct: 64750 ttggtcagctctgacagcaccggcgaaatgccgtt 64716 Score = 210 bits (106), Expect = 2e-50 Identities = 142/154 (92%) Strand = Plus / Minus Query: 428 aaatcttccgggtgcacacattcaagcaccgccactaacaggggcttcaggcccaattgt 487 ||||||||||||||||| ||| | |||||||| ||||||||||| ||||||||||||||| Sbjct: 64621 aaatcttccgggtgcactcatccgagcaccgctactaacaggggtttcaggcccaattgt 64562 Query: 488 acagctgatcaaagtagggtgaagaagttcctcgcctgtaagtacaggaaagttgctcct 547 ||||||| ||| |||||||| |||||||| |||||||||||| |||||||||||||||| Sbjct: 64561 acagctggtcatagtagggtaaagaagttgctcgcctgtaagcacaggaaagttgctcca 64502 Query: 548 gccagaatgcacaaaggagatctttcctatagtg 581 ||||| |||||||||||||||||||||||||||| Sbjct: 64501 gccaggatgcacaaaggagatctttcctatagtg 64468 Score = 198 bits (100), Expect = 6e-47 Identities = 208/244 (85%) Strand = Plus / Minus Query: 912 agaaaactgttctggaggcagtaaatgccatgcttggaggtggtctgcgtgtgggtgttc 971 ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | Sbjct: 63740 agaaaactgttctggaggcagtaaatgccatacttggaggtggtctgcgtgtcggtgtgc 63681 Query: 972 ttcaccatggaaagaaaatcagggatgatagcaaaaccctaatacaagctgggattggtc 1031 | || ||||| |||||| |||| ||||||| |||||| |||| || ||||||||| || Sbjct: 63680 tccatcatgggaagaaagtcagagatgataataaaaccttaatgcaggctgggatttctc 63621 Query: 1032 atgatgatatgctggacaacataggcttttcacttgaacccaactgtacacggcattcat 1091 ||||||| | ||||||||| | || ||||| ||||||||||| ||| ||| |||| | | Sbjct: 63620 atgatgaggtactggacaacctgggtttttctcttgaacccaattgtgcaccgcatccgt 63561 Query: 1092 cacaagttgcagctcctgaagatattgaattcctagaaactgttgaaactactgaacccc 1151 ||||| | || |||| ||||||| ||||||| | ||||||||||| ||||||||||||| Sbjct: 63560 cacaactctcacctcccgaagataatgaattcatggaaactgttgatactactgaacccc 63501 Query: 1152 tagc 1155 |||| Sbjct: 63500 tagc 63497 Score = 137 bits (69), Expect = 2e-28 Identities = 96/105 (91%) Strand = Plus / Minus Query: 581 gatgctgaccggaagccttctttccgaaacaagaaaatgtattatacgcggcaaaggacc 640 |||| ||||||||||||||||||||| |||||||||||||||||||| || |||||||| Sbjct: 64354 gatgttgaccggaagccttctttccgcaacaagaaaatgtattatacacgacaaaggaca 64295 Query: 641 caaaggagtacatttaagcgaaggaagatgttggatcgtcattca 685 |||||||| ||||| ||||| ||||||||||| |||||||||||| Sbjct: 64294 caaaggagcacattcaagcggaggaagatgtttgatcgtcattca 64250 Score = 135 bits (68), Expect = 8e-28 Identities = 87/92 (94%), Gaps = 1/92 (1%) Strand = Plus / Minus Query: 1889 ttgttgtaatatctactcaccaactattcttttaagccagggttctctctccttgtgaat 1948 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 61942 ttgttgtaatatctactcaccaattattctttcaagccagggttctctctccttgtgaat 61883 Query: 1949 ttaaccaaagg-aaagggtatttctttggcaa 1979 ||||||||||| | ||||||||||||||||| Sbjct: 61882 ttaaccaaaggtatggggtatttctttggcaa 61851 Score = 123 bits (62), Expect = 3e-24 Identities = 74/78 (94%) Strand = Plus / Minus Query: 836 aaacttaagatcaaatctttcaaggtgcctgaacttctaattgagatcccagaaactgct 895 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63938 aaacttaggatcaagtctttcaaggtgcctgaacttctaattgagatcccagaaactgcg 63879 Query: 896 tctgttggttcactgaag 913 ||||||||||||||||| Sbjct: 63878 actgttggttcactgaag 63861 Score = 91.7 bits (46), Expect = 1e-14 Identities = 159/189 (84%), Gaps = 12/189 (6%) Strand = Plus / Minus Query: 2092 agcttcagattcttttgttcagttcaattcattcttt-gttaagaggatgagaaaggtgg 2150 |||||||||||||||||| || ||||||||||||||| |||| ||||||||| |||| Sbjct: 61741 agcttcagattcttttgt-caattcaattcattcttttgtta---ggatgagaatggtga 61686 Query: 2151 aaggataaggaggga-ggatctgtgct-cccctttttcctgttttttcttcttctgtta- 2207 || |||||||||||| ||||| |||| ||||||||| ||||| ||| || ||||| Sbjct: 61685 aaagataaggagggatggatcattgcttccccttttt----tttttcctttttttgttat 61630 Query: 2208 cttagttgtactattttcccttcaccaatcttgtagttattttgatcccctcaacattgt 2267 | ||| |||||||| || ||||||||||||||||||||| ||| ||||||||| |||| Sbjct: 61629 cctaggtgtactatgttttcttcaccaatcttgtagttatcttggtcccctcaaagttgt 61570 Query: 2268 acttgatca 2276 ||||||||| Sbjct: 61569 acttgatca 61561 Score = 77.8 bits (39), Expect = 2e-10 Identities = 60/67 (89%) Strand = Plus / Minus Query: 1481 agatggcgagatgttaaacttcgtgcttttgataatgccaagcatcggacctatgttgat 1540 |||||||||||||| |||||||| || ||||||||||| ||||| ||||| || |||||| Sbjct: 63015 agatggcgagatgtcaaacttcgggcctttgataatgcaaagcaccggacttacgttgat 62956 Query: 1541 cttaagg 1547 ||||||| Sbjct: 62955 cttaagg 62949 Score = 73.8 bits (37), Expect = 3e-09 Identities = 49/53 (92%) Strand = Plus / Minus Query: 1793 cagtcagcccattgaaaggaggttaaggaagatagtagaaaaaaatatatata 1845 ||||||| ||||| |||||||||||||||||||| |||||||||| ||||||| Sbjct: 62023 cagtcagtccattcaaaggaggttaaggaagatattagaaaaaaagatatata 61971 Score = 50.1 bits (25), Expect = 0.036 Identities = 25/25 (100%) Strand = Plus / Minus Query: 2024 tccatgaactgagatctgcagtgac 2048 ||||||||||||||||||||||||| Sbjct: 61816 tccatgaactgagatctgcagtgac 61792
>gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0014A21, from chromosome 3, complete sequence Length = 134014 Score = 319 bits (161), Expect = 3e-83 Identities = 225/245 (91%), Gaps = 1/245 (0%) Strand = Plus / Minus Query: 1545 aggacaaatggaagacgctggtgcacacggcgagcatctcgccccagcagcggcgcggtg 1604 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || | Sbjct: 132120 aggacaaatggaagacgctcgtgcacacggcgagcatctcgccccagcagcggcgtggcg 132061 Query: 1605 agccggtgccgcaggatctgctcgaccgggtccttgcggcccagtcctattggtcccagc 1664 |||||||||| ||||| ||||||||| ||||||| ||||| ||| |||||||||| |||| Sbjct: 132060 agccggtgccacaggagctgctcgacagggtcctggcggctcaggcctattggtctcagc 132001 Query: 1665 agcaggccaagctccagcctaagacgcccccactggctgaggctcgcctgctcacctaat 1724 |||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 132000 agcaagccaagctccagcctaagacgcccccgctggctgaggctctcctgctcacctaat 131941 Query: 1725 aactcccatctcagcaaatggtctcttaagaaaccatcccagcttttgtataaagtcagt 1784 ||| | |||||||| |||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 131940 aac-ctgatctcagctaatggtctcttaggaaaccattccagcttttgtataaagtcagt 131882 Query: 1785 aagtc 1789 |||| Sbjct: 131881 cagtc 131877 Score = 289 bits (146), Expect = 2e-74 Identities = 281/326 (86%) Strand = Plus / Minus Query: 1157 aggatcgcacctgcggactcgtcttccaagcacggcgaagtcgatgcctcacaggagctt 1216 ||||| |||||||| ||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 133273 aggattgcacctgctgactcatcttccaagcatggtgaagttgatgcttcacaggagctt 133214 Query: 1217 gcattgacacccttgacagctaattaccaggggaatgatcatgattcagtgcactctcct 1276 |||||| ||||||| |||| || ||||| |||| ||||||||| | |||||||||||| Sbjct: 133213 gcattggcacccttatcagcaaactaccaagggagtgatcatgactttgtgcactctcct 133154 Query: 1277 gggggcatctcctcacctgagagagcttcagcaaactcgcgagctattgttccagttaca 1336 |||||||| || |||||||| | || || |||||||||||||||||||||||||||| Sbjct: 133153 gggggcatgtcttcacctgataaggcatccacaaactcgcgagctattgttccagttact 133094 Query: 1337 cccgtagattccagcgcaggggcgatagttccagcaaacaaggcgaagagatcagcggaa 1396 || | |||||||| || ||||| ||||||||||||||||| || ||||| ||| | ||| Sbjct: 133093 cctgcagattccaatgctggggctatagttccagcaaacaaagcaaagaggtcacctgaa 133034 Query: 1397 caggggcagcgtcgaatcagacgtccgttctctgttgctgaagtggaagcacttgtgctt 1456 || ||||| || |||||||| ||||||||||||||||| ||||||||||| ||||||||| Sbjct: 133033 caagggcaacgccgaatcaggcgtccgttctctgttgccgaagtggaagcccttgtgctt 132974 Query: 1457 gcagtcgaaaagcttggaactggaag 1482 ||||| |||||||||||||| ||||| Sbjct: 132973 gcagttgaaaagcttggaaccggaag 132948 Score = 198 bits (100), Expect = 6e-47 Identities = 208/244 (85%) Strand = Plus / Minus Query: 912 agaaaactgttctggaggcagtaaatgccatgcttggaggtggtctgcgtgtgggtgttc 971 ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | Sbjct: 133602 agaaaactgttctggaggcagtaaatgccatacttggaggtggtctgcgtgtcggtgtgc 133543 Query: 972 ttcaccatggaaagaaaatcagggatgatagcaaaaccctaatacaagctgggattggtc 1031 | || ||||| |||||| |||| ||||||| |||||| |||| || ||||||||| || Sbjct: 133542 tccatcatgggaagaaagtcagagatgataataaaaccttaatgcaggctgggatttctc 133483 Query: 1032 atgatgatatgctggacaacataggcttttcacttgaacccaactgtacacggcattcat 1091 ||||||| | ||||||||| | || ||||| ||||||||||| ||| ||| |||| | | Sbjct: 133482 atgatgaggtactggacaacctgggtttttctcttgaacccaattgtgcaccgcatccgt 133423 Query: 1092 cacaagttgcagctcctgaagatattgaattcctagaaactgttgaaactactgaacccc 1151 ||||| | || |||| ||||||| ||||||| | ||||||||||| ||||||||||||| Sbjct: 133422 cacaactctcacctcccgaagataatgaattcatggaaactgttgatactactgaacccc 133363 Query: 1152 tagc 1155 |||| Sbjct: 133362 tagc 133359 Score = 135 bits (68), Expect = 8e-28 Identities = 87/92 (94%), Gaps = 1/92 (1%) Strand = Plus / Minus Query: 1889 ttgttgtaatatctactcaccaactattcttttaagccagggttctctctccttgtgaat 1948 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 131804 ttgttgtaatatctactcaccaattattctttcaagccagggttctctctccttgtgaat 131745 Query: 1949 ttaaccaaagg-aaagggtatttctttggcaa 1979 ||||||||||| | ||||||||||||||||| Sbjct: 131744 ttaaccaaaggtatggggtatttctttggcaa 131713 Score = 123 bits (62), Expect = 3e-24 Identities = 74/78 (94%) Strand = Plus / Minus Query: 836 aaacttaagatcaaatctttcaaggtgcctgaacttctaattgagatcccagaaactgct 895 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133800 aaacttaggatcaagtctttcaaggtgcctgaacttctaattgagatcccagaaactgcg 133741 Query: 896 tctgttggttcactgaag 913 ||||||||||||||||| Sbjct: 133740 actgttggttcactgaag 133723 Score = 91.7 bits (46), Expect = 1e-14 Identities = 159/189 (84%), Gaps = 12/189 (6%) Strand = Plus / Minus Query: 2092 agcttcagattcttttgttcagttcaattcattcttt-gttaagaggatgagaaaggtgg 2150 |||||||||||||||||| || ||||||||||||||| |||| ||||||||| |||| Sbjct: 131603 agcttcagattcttttgt-caattcaattcattcttttgtta---ggatgagaatggtga 131548 Query: 2151 aaggataaggaggga-ggatctgtgct-cccctttttcctgttttttcttcttctgtta- 2207 || |||||||||||| ||||| |||| ||||||||| ||||| ||| || ||||| Sbjct: 131547 aaagataaggagggatggatcattgcttccccttttt----tttttcctttttttgttat 131492 Query: 2208 cttagttgtactattttcccttcaccaatcttgtagttattttgatcccctcaacattgt 2267 | ||| |||||||| || ||||||||||||||||||||| ||| ||||||||| |||| Sbjct: 131491 cctaggtgtactatgttttcttcaccaatcttgtagttatcttggtcccctcaaagttgt 131432 Query: 2268 acttgatca 2276 ||||||||| Sbjct: 131431 acttgatca 131423 Score = 77.8 bits (39), Expect = 2e-10 Identities = 60/67 (89%) Strand = Plus / Minus Query: 1481 agatggcgagatgttaaacttcgtgcttttgataatgccaagcatcggacctatgttgat 1540 |||||||||||||| |||||||| || ||||||||||| ||||| ||||| || |||||| Sbjct: 132877 agatggcgagatgtcaaacttcgggcctttgataatgcaaagcaccggacttacgttgat 132818 Query: 1541 cttaagg 1547 ||||||| Sbjct: 132817 cttaagg 132811 Score = 73.8 bits (37), Expect = 3e-09 Identities = 49/53 (92%) Strand = Plus / Minus Query: 1793 cagtcagcccattgaaaggaggttaaggaagatagtagaaaaaaatatatata 1845 ||||||| ||||| |||||||||||||||||||| |||||||||| ||||||| Sbjct: 131885 cagtcagtccattcaaaggaggttaaggaagatattagaaaaaaagatatata 131833 Score = 50.1 bits (25), Expect = 0.036 Identities = 25/25 (100%) Strand = Plus / Minus Query: 2024 tccatgaactgagatctgcagtgac 2048 ||||||||||||||||||||||||| Sbjct: 131678 tccatgaactgagatctgcagtgac 131654
>emb|AJ234812.1|HVU234812 Hordeum vulgare genomic DNA fragment; clone MWG2159.rev Length = 186 Score = 250 bits (126), Expect = 2e-62 Identities = 126/126 (100%) Strand = Plus / Minus Query: 1861 ggtacaagaagtattgaccgaccgaaaattgttgtaatatctactcaccaactattcttt 1920 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178 ggtacaagaagtattgaccgaccgaaaattgttgtaatatctactcaccaactattcttt 119 Query: 1921 taagccagggttctctctccttgtgaatttaaccaaaggaaagggtatttctttggcaaa 1980 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118 taagccagggttctctctccttgtgaatttaaccaaaggaaagggtatttctttggcaaa 59 Query: 1981 ttgtac 1986 |||||| Sbjct: 58 ttgtac 53 Score = 67.9 bits (34), Expect = 2e-07 Identities = 34/34 (100%) Strand = Plus / Minus Query: 2005 gaagaagaagatgattcattccatgaactgagat 2038 |||||||||||||||||||||||||||||||||| Sbjct: 34 gaagaagaagatgattcattccatgaactgagat 1
>emb|AJ234811.1|HVU234811 Hordeum vulgare genomic DNA fragment; clone MWG2159.uni Length = 247 Score = 161 bits (81), Expect = 1e-35 Identities = 81/81 (100%) Strand = Plus / Plus Query: 833 gtgaaacttaagatcaaatctttcaaggtgcctgaacttctaattgagatcccagaaact 892 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131 gtgaaacttaagatcaaatctttcaaggtgcctgaacttctaattgagatcccagaaact 190 Query: 893 gcttctgttggttcactgaag 913 ||||||||||||||||||||| Sbjct: 191 gcttctgttggttcactgaag 211 Score = 119 bits (60), Expect = 5e-23 Identities = 60/60 (100%) Strand = Plus / Plus Query: 774 caaacaagggcagcaactcaacgccattccatggatcctgtaaatcgaacgattgccatg 833 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaacaagggcagcaactcaacgccattccatggatcctgtaaatcgaacgattgccatg 60
>emb|AJ234793.1|HVU234793 Hordeum vulgare genomic DNA fragment; clone MWG2134.uni Length = 284 Score = 161 bits (81), Expect = 1e-35 Identities = 81/81 (100%) Strand = Plus / Plus Query: 833 gtgaaacttaagatcaaatctttcaaggtgcctgaacttctaattgagatcccagaaact 892 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131 gtgaaacttaagatcaaatctttcaaggtgcctgaacttctaattgagatcccagaaact 190 Query: 893 gcttctgttggttcactgaag 913 ||||||||||||||||||||| Sbjct: 191 gcttctgttggttcactgaag 211 Score = 119 bits (60), Expect = 5e-23 Identities = 60/60 (100%) Strand = Plus / Plus Query: 774 caaacaagggcagcaactcaacgccattccatggatcctgtaaatcgaacgattgccatg 833 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaacaagggcagcaactcaacgccattccatggatcctgtaaatcgaacgattgccatg 60
>emb|AJ251686.1|CRO251686 Catharanthus roseus mRNA for MYB-like DNA-binding protein (bpf-1 gene) Length = 2173 Score = 97.6 bits (49), Expect = 2e-16 Identities = 106/125 (84%) Strand = Plus / Plus Query: 1469 cttggaactggaagatggcgagatgttaaacttcgtgcttttgataatgccaagcatcgg 1528 |||||||||||||| ||||| ||||||||| | ||||||||||| |||||| | ||||| Sbjct: 1819 cttggaactggaaggtggcgtgatgttaaaatgcgtgcttttgacaatgccgatcatcga 1878 Query: 1529 acctatgttgatcttaaggacaaatggaagacgctggtgcacacggcgagcatctcgccc 1588 || |||||||| | ||||||||||||||||| |||| ||||| || |||||||| || Sbjct: 1879 acttatgttgacttgaaggacaaatggaagaccttggtccacacagcaagcatctctcca 1938 Query: 1589 cagca 1593 ||||| Sbjct: 1939 cagca 1943 Score = 48.1 bits (24), Expect = 0.14 Identities = 36/40 (90%) Strand = Plus / Plus Query: 875 attgagatcccagaaactgcttctgttggttcactgaaga 914 |||||||| |||||||| ||| ||||||||||||| |||| Sbjct: 1237 attgagattccagaaacagctactgttggttcacttaaga 1276
>emb|CT831154.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA220I16, full insert sequence Length = 2498 Score = 85.7 bits (43), Expect = 7e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 1527 ggacctatgttgatcttaaggacaaatggaagacgctggtgcacacggcgagcat 1581 |||||||||||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 2065 ggacctatgttgatctgaaggacaagtggaagaccctggtgcacacggcgagcat 2119
>ref|NM_001055059.1| Oryza sativa (japonica cultivar-group) Os02g0817800 (Os02g0817800) mRNA, complete cds Length = 2926 Score = 85.7 bits (43), Expect = 7e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 1527 ggacctatgttgatcttaaggacaaatggaagacgctggtgcacacggcgagcat 1581 |||||||||||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 2064 ggacctatgttgatctgaaggacaagtggaagaccctggtgcacacggcgagcat 2118
>gb|AF242298.1|AF242298 Oryza sativa telomere binding protein-1 mRNA, complete cds Length = 2031 Score = 85.7 bits (43), Expect = 7e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 1527 ggacctatgttgatcttaaggacaaatggaagacgctggtgcacacggcgagcat 1581 |||||||||||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 1739 ggacctatgttgatctgaaggacaagtggaagaccctggtgcacacggcgagcat 1793 Score = 73.8 bits (37), Expect = 3e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 845 atcaaatctttcaaggtgcctgaacttctaattgagatcccagaaactgcttctgttggt 904 |||||||||||||| | |||||||| |||||||||||||| |||| ||| | |||||| Sbjct: 1090 atcaaatctttcaacatccctgaactactaattgagatccctgaaaatgcaacagttggt 1149 Query: 905 tcactgaagaaaactgt 921 ||| ||||||||||||| Sbjct: 1150 tcattgaagaaaactgt 1166
>dbj|AK100685.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113M24, full insert sequence Length = 2928 Score = 85.7 bits (43), Expect = 7e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 1527 ggacctatgttgatcttaaggacaaatggaagacgctggtgcacacggcgagcat 1581 |||||||||||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 2066 ggacctatgttgatctgaaggacaagtggaagaccctggtgcacacggcgagcat 2120
>dbj|AK068473.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157F01, full insert sequence Length = 3184 Score = 85.7 bits (43), Expect = 7e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 1527 ggacctatgttgatcttaaggacaaatggaagacgctggtgcacacggcgagcat 1581 |||||||||||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 2744 ggacctatgttgatctgaaggacaagtggaagaccctggtgcacacggcgagcat 2798 Score = 73.8 bits (37), Expect = 3e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 845 atcaaatctttcaaggtgcctgaacttctaattgagatcccagaaactgcttctgttggt 904 |||||||||||||| | |||||||| |||||||||||||| |||| ||| | |||||| Sbjct: 1898 atcaaatctttcaacatccctgaactactaattgagatccctgaaaatgcaacagttggt 1957 Query: 905 tcactgaagaaaactgt 921 ||| ||||||||||||| Sbjct: 1958 tcattgaagaaaactgt 1974
>ref|NM_100628.1| Arabidopsis thaliana TRFL2 (TRF-LIKE 2); DNA binding (TRFL2) mRNA, complete cds Length = 1869 Score = 79.8 bits (40), Expect = 4e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 1505 gcttttgataatgccaagcatcggacctatgttgatcttaaggacaaatggaagacgctg 1564 |||||||||||||| ||||| || || || |||||| | ||||||||||||||||||||| Sbjct: 1648 gcttttgataatgctaagcaccgtacttacgttgatttgaaggacaaatggaagacgctg 1707 Query: 1565 gtgcacac 1572 |||||||| Sbjct: 1708 gtgcacac 1715
>gb|AY519535.1| Arabidopsis thaliana MYB transcription factor (At1g07540) mRNA, complete cds Length = 1893 Score = 79.8 bits (40), Expect = 4e-11 Identities = 61/68 (89%) Strand = Plus / Plus Query: 1505 gcttttgataatgccaagcatcggacctatgttgatcttaaggacaaatggaagacgctg 1564 |||||||||||||| ||||| || || || |||||| | ||||||||||||||||||||| Sbjct: 1672 gcttttgataatgctaagcaccgtacttacgttgatttgaaggacaaatggaagacgctg 1731 Query: 1565 gtgcacac 1572 |||||||| Sbjct: 1732 gtgcacac 1739
>dbj|AK229705.1| Arabidopsis thaliana mRNA for telomere repeat-binding protein like, complete cds, clone: RAFL21-19-A08 Length = 2156 Score = 75.8 bits (38), Expect = 6e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 1523 catcggacctatgttgatcttaaggacaaatggaagacgctggtgcacacggcgagcatc 1582 ||||| |||||||||||||| ||||| || |||||||||||||| |||||||| || || Sbjct: 1745 catcgtacctatgttgatctcaaggataagtggaagacgctggtccacacggcaaggata 1804 Query: 1583 tcgccccagcagcggcgcggtgagccggtgccgcagga 1620 || || || |||||| | || ||||||||||| ||||| Sbjct: 1805 tctccacaacagcggagaggagagccggtgccacagga 1842
>ref|NM_114526.3| Arabidopsis thaliana TRFL1 (TRF-LIKE 1); DNA binding (TRFL1) mRNA, complete cds Length = 2274 Score = 75.8 bits (38), Expect = 6e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 1523 catcggacctatgttgatcttaaggacaaatggaagacgctggtgcacacggcgagcatc 1582 ||||| |||||||||||||| ||||| || |||||||||||||| |||||||| || || Sbjct: 1838 catcgtacctatgttgatctcaaggataagtggaagacgctggtccacacggcaaggata 1897 Query: 1583 tcgccccagcagcggcgcggtgagccggtgccgcagga 1620 || || || |||||| | || ||||||||||| ||||| Sbjct: 1898 tctccacaacagcggagaggagagccggtgccacagga 1935
>ref|NM_001035744.1| Arabidopsis thaliana TRFL1 (TRF-LIKE 1); DNA binding (TRFL1) mRNA, complete cds Length = 2319 Score = 75.8 bits (38), Expect = 6e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 1523 catcggacctatgttgatcttaaggacaaatggaagacgctggtgcacacggcgagcatc 1582 ||||| |||||||||||||| ||||| || |||||||||||||| |||||||| || || Sbjct: 1841 catcgtacctatgttgatctcaaggataagtggaagacgctggtccacacggcaaggata 1900 Query: 1583 tcgccccagcagcggcgcggtgagccggtgccgcagga 1620 || || || |||||| | || ||||||||||| ||||| Sbjct: 1901 tctccacaacagcggagaggagagccggtgccacagga 1938
>gb|AY568647.1| Arabidopsis thaliana telomere repeat-binding protein-like (At3g46590) mRNA, complete cds Length = 1659 Score = 75.8 bits (38), Expect = 6e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 1523 catcggacctatgttgatcttaaggacaaatggaagacgctggtgcacacggcgagcatc 1582 ||||| |||||||||||||| ||||| || |||||||||||||| |||||||| || || Sbjct: 1462 catcgtacctatgttgatctcaaggataagtggaagacgctggtccacacggcaaggata 1521 Query: 1583 tcgccccagcagcggcgcggtgagccggtgccgcagga 1620 || || || |||||| | || ||||||||||| ||||| Sbjct: 1522 tctccacaacagcggagaggagagccggtgccacagga 1559
>gb|AY519541.1| Arabidopsis thaliana MYB transcription factor (At3g46590) mRNA, complete cds Length = 1659 Score = 75.8 bits (38), Expect = 6e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 1523 catcggacctatgttgatcttaaggacaaatggaagacgctggtgcacacggcgagcatc 1582 ||||| |||||||||||||| ||||| || |||||||||||||| |||||||| || || Sbjct: 1462 catcgtacctatgttgatctcaaggataagtggaagacgctggtccacacggcaaggata 1521 Query: 1583 tcgccccagcagcggcgcggtgagccggtgccgcagga 1620 || || || |||||| | || ||||||||||| ||||| Sbjct: 1522 tctccacaacagcggagaggagagccggtgccacagga 1559
>gb|AY090966.1| Arabidopsis thaliana putative telomere repeat-binding protein homolog (At3g46590) mRNA, partial cds Length = 603 Score = 75.8 bits (38), Expect = 6e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 1523 catcggacctatgttgatcttaaggacaaatggaagacgctggtgcacacggcgagcatc 1582 ||||| |||||||||||||| ||||| || |||||||||||||| |||||||| || || Sbjct: 161 catcgtacctatgttgatctcaaggataagtggaagacgctggtccacacggcaaggata 220 Query: 1583 tcgccccagcagcggcgcggtgagccggtgccgcagga 1620 || || || |||||| | || ||||||||||| ||||| Sbjct: 221 tctccacaacagcggagaggagagccggtgccacagga 258
>emb|AJ630475.1| Arabidopsis thaliana mRNA for telomere repeat-binding protein homologue Length = 1659 Score = 75.8 bits (38), Expect = 6e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 1523 catcggacctatgttgatcttaaggacaaatggaagacgctggtgcacacggcgagcatc 1582 ||||| |||||||||||||| ||||| || |||||||||||||| |||||||| || || Sbjct: 1462 catcgtacctatgttgatctcaaggataagtggaagacgctggtccacacggcaaggata 1521 Query: 1583 tcgccccagcagcggcgcggtgagccggtgccgcagga 1620 || || || |||||| | || ||||||||||| ||||| Sbjct: 1522 tctccacaacagcggagaggagagccggtgccacagga 1559
>emb|BX822804.1|CNS0A5Y0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB65ZB08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1987 Score = 75.8 bits (38), Expect = 6e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 1523 catcggacctatgttgatcttaaggacaaatggaagacgctggtgcacacggcgagcatc 1582 ||||| |||||||||||||| ||||| || |||||||||||||| |||||||| || || Sbjct: 1625 catcgtacctatgttgatctcaaggataagtggaagacgctggtccacacggcaaggata 1684 Query: 1583 tcgccccagcagcggcgcggtgagccggtgccgcagga 1620 || || || |||||| | || ||||||||||| ||||| Sbjct: 1685 tctccacaacagcggagaggagagccggtgccacagga 1722
>gb|AY395985.1| Arabidopsis thaliana telomeric repeat-binding protein 4 (TRP4) mRNA, complete cds Length = 2205 Score = 75.8 bits (38), Expect = 6e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 1523 catcggacctatgttgatcttaaggacaaatggaagacgctggtgcacacggcgagcatc 1582 ||||| |||||||||||||| ||||| || |||||||||||||| |||||||| || || Sbjct: 1794 catcgtacctatgttgatctcaaggataagtggaagacgctggtccacacggcaaggata 1853 Query: 1583 tcgccccagcagcggcgcggtgagccggtgccgcagga 1620 || || || |||||| | || ||||||||||| ||||| Sbjct: 1854 tctccacaacagcggagaggagagccggtgccacagga 1891
>dbj|AB183147.1| Solanum lycopersicum LeTBP1 mRNA for telomere binding protein, complete cds Length = 2389 Score = 71.9 bits (36), Expect = 1e-08 Identities = 78/92 (84%) Strand = Plus / Plus Query: 1469 cttggaactggaagatggcgagatgttaaacttcgtgcttttgataatgccaagcatcgg 1528 |||||||||||||| ||||| ||||||||| | |||||||| |||||||| | ||||| Sbjct: 2089 cttggaactggaaggtggcgtgatgttaaaatgcgtgctttcgataatgctgatcatcga 2148 Query: 1529 acctatgttgatcttaaggacaaatggaagac 1560 || |||||||| | ||||| ||||||||||| Sbjct: 2149 acttatgttgacttgaaggataaatggaagac 2180
>ref|NM_180890.1| Arabidopsis thaliana DNA binding (AT5G59430) mRNA, complete cds Length = 2162 Score = 71.9 bits (36), Expect = 1e-08 Identities = 123/152 (80%) Strand = Plus / Plus Query: 1424 ttctctgttgctgaagtggaagcacttgtgcttgcagtcgaaaagcttggaactggaaga 1483 ||||| ||||||||||| ||||||||||| | ||||| || || || || |||||||| Sbjct: 1586 ttctcagttgctgaagtagaagcacttgttcaagcagttgagaaactcggtactggaagg 1645 Query: 1484 tggcgagatgttaaacttcgtgcttttgataatgccaagcatcggacctatgttgatctt 1543 ||| |||||||||| ||| ||||||| || |||| | || || || || || ||||| Sbjct: 1646 tggagagatgttaagctttgtgctttcgaggatgctgaccaccgcacttacgtagatctc 1705 Query: 1544 aaggacaaatggaagacgctggtgcacacggc 1575 ||||| |||||||| |||||||| |||||||| Sbjct: 1706 aaggataaatggaaaacgctggtccacacggc 1737 Score = 60.0 bits (30), Expect = 4e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 829 ccatgtgaaacttaagatcaaatctttcaaggtgcctgaacttctaattgagatcccaga 888 |||||||||||| |||||| || |||| ||||||||| ||| | || ||||| ||||| Sbjct: 1048 ccatgtgaaactacggatcaagtcgttcagggtgcctgagcttttcatagagattccaga 1107 Query: 889 aactgcttctgttggttcactgaaga 914 ||||||| ||||||| ||| |||||| Sbjct: 1108 aactgctactgttggctcattgaaga 1133
>ref|NM_125334.3| Arabidopsis thaliana DNA binding (AT5G59430) mRNA, complete cds Length = 2356 Score = 71.9 bits (36), Expect = 1e-08 Identities = 123/152 (80%) Strand = Plus / Plus Query: 1424 ttctctgttgctgaagtggaagcacttgtgcttgcagtcgaaaagcttggaactggaaga 1483 ||||| ||||||||||| ||||||||||| | ||||| || || || || |||||||| Sbjct: 1780 ttctcagttgctgaagtagaagcacttgttcaagcagttgagaaactcggtactggaagg 1839 Query: 1484 tggcgagatgttaaacttcgtgcttttgataatgccaagcatcggacctatgttgatctt 1543 ||| |||||||||| ||| ||||||| || |||| | || || || || || ||||| Sbjct: 1840 tggagagatgttaagctttgtgctttcgaggatgctgaccaccgcacttacgtagatctc 1899 Query: 1544 aaggacaaatggaagacgctggtgcacacggc 1575 ||||| |||||||| |||||||| |||||||| Sbjct: 1900 aaggataaatggaaaacgctggtccacacggc 1931 Score = 60.0 bits (30), Expect = 4e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 829 ccatgtgaaacttaagatcaaatctttcaaggtgcctgaacttctaattgagatcccaga 888 |||||||||||| |||||| || |||| ||||||||| ||| | || ||||| ||||| Sbjct: 1242 ccatgtgaaactacggatcaagtcgttcagggtgcctgagcttttcatagagattccaga 1301 Query: 889 aactgcttctgttggttcactgaaga 914 ||||||| ||||||| ||| |||||| Sbjct: 1302 aactgctactgttggctcattgaaga 1327
>gb|AY519544.1| Arabidopsis thaliana MYB transcription factor (At5g59430) mRNA, complete cds Length = 1737 Score = 71.9 bits (36), Expect = 1e-08 Identities = 123/152 (80%) Strand = Plus / Plus Query: 1424 ttctctgttgctgaagtggaagcacttgtgcttgcagtcgaaaagcttggaactggaaga 1483 ||||| ||||||||||| ||||||||||| | ||||| || || || || |||||||| Sbjct: 1411 ttctcagttgctgaagtagaagcacttgttcaagcagttgagaaactcggtactggaagg 1470 Query: 1484 tggcgagatgttaaacttcgtgcttttgataatgccaagcatcggacctatgttgatctt 1543 ||| |||||||||| ||| ||||||| || |||| | || || || || || ||||| Sbjct: 1471 tggagagatgttaagctttgtgctttcgaggatgctgaccaccgcacttacgtagatctc 1530 Query: 1544 aaggacaaatggaagacgctggtgcacacggc 1575 ||||| |||||||| |||||||| |||||||| Sbjct: 1531 aaggataaatggaaaacgctggtccacacggc 1562 Score = 60.0 bits (30), Expect = 4e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 829 ccatgtgaaacttaagatcaaatctttcaaggtgcctgaacttctaattgagatcccaga 888 |||||||||||| |||||| || |||| ||||||||| ||| | || ||||| ||||| Sbjct: 873 ccatgtgaaactacggatcaagtcgttcagggtgcctgagcttttcatagagattccaga 932 Query: 889 aactgcttctgttggttcactgaaga 914 ||||||| ||||||| ||| |||||| Sbjct: 933 aactgctactgttggctcattgaaga 958
>emb|BX830199.1|CNS0A063 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB65ZG02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 550 Score = 71.9 bits (36), Expect = 1e-08 Identities = 123/152 (80%) Strand = Plus / Plus Query: 1424 ttctctgttgctgaagtggaagcacttgtgcttgcagtcgaaaagcttggaactggaaga 1483 ||||| ||||||||||| ||||||||||| | ||||| || || || || |||||||| Sbjct: 54 ttctcagttgctgaagtagaagcacttgttcaagcagttgagaaactcggtactggaagg 113 Query: 1484 tggcgagatgttaaacttcgtgcttttgataatgccaagcatcggacctatgttgatctt 1543 ||| |||||||||| ||| ||||||| || |||| | || || || || || ||||| Sbjct: 114 tggagagatgttaagctttgtgctttcgaggatgctgaccaccgcacttacgtagatctc 173 Query: 1544 aaggacaaatggaagacgctggtgcacacggc 1575 ||||| |||||||| |||||||| |||||||| Sbjct: 174 aaggataaatggaaaacgctggtccacacggc 205
>emb|BX830705.1|CNS0A1NQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZB12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2247 Score = 65.9 bits (33), Expect = 6e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 829 ccatgtgaaacttaagatcaaatctttcaaggtgcctgaacttctaattgagatcccaga 888 |||||||||||| |||||| || |||| ||||||||| ||| | || ||||| ||||| Sbjct: 1242 ccatgtgaaactacggatcaagtcgttcagggtgcctgagcttttcatagagattccaga 1301 Query: 889 aactgcttctgttggttcactgaagaaaa 917 ||||||| ||||||| ||| ||||||||| Sbjct: 1302 aactgctactgttggctcattgaagaaaa 1330 Score = 54.0 bits (27), Expect = 0.002 Identities = 120/151 (79%) Strand = Plus / Plus Query: 1425 tctctgttgctgaagtggaagcacttgtgcttgcagtcgaaaagcttggaactggaagat 1484 |||| ||||||||||| |||||||||| | ||||| || || || || |||||||| | Sbjct: 1779 tctcagttgctgaagtagaagcacttgctcaagcagttgagaaactcggtactggaaggt 1838 Query: 1485 ggcgagatgttaaacttcgtgcttttgataatgccaagcatcggacctatgttgatctta 1544 || |||||||||| ||| ||||| | || |||| | || || || || || ||||| | Sbjct: 1839 ggagagatgttaagctttgtgctctcgaggatgctgaccaccgcacttacgtagatctca 1898 Query: 1545 aggacaaatggaagacgctggtgcacacggc 1575 |||| |||||||| |||||||| |||||||| Sbjct: 1899 aggataaatggaaaacgctggtccacacggc 1929
>gb|AF543195.1| Nicotiana glutinosa telomere binding protein TBP1 mRNA, complete cds Length = 2456 Score = 63.9 bits (32), Expect = 2e-06 Identities = 77/92 (83%) Strand = Plus / Plus Query: 1469 cttggaactggaagatggcgagatgttaaacttcgtgcttttgataatgccaagcatcgg 1528 |||||||||||||| ||||| ||||| ||| | ||||||||||||||||| | || || Sbjct: 1882 cttggaactggaaggtggcgtgatgtcaaaatgcgtgcttttgataatgctgatcaccga 1941 Query: 1529 acctatgttgatcttaaggacaaatggaagac 1560 || |||||||| | ||||| ||||||||||| Sbjct: 1942 acttatgttgacttgaaggataaatggaagac 1973
>gb|BT000117.1| Arabidopsis thaliana telomere repeat-binding protein (At5g59430) mRNA, complete cds Length = 1915 Score = 63.9 bits (32), Expect = 2e-06 Identities = 116/144 (80%) Strand = Plus / Plus Query: 1432 tgctgaagtggaagcacttgtgcttgcagtcgaaaagcttggaactggaagatggcgaga 1491 ||||||||| ||||||||||| | ||||| || || || || |||||||| ||| |||| Sbjct: 1419 tgctgaagtagaagcacttgttcaagcagttgagaaactcggtactggaaggtggagaga 1478 Query: 1492 tgttaaacttcgtgcttttgataatgccaagcatcggacctatgttgatcttaaggacaa 1551 |||||| ||| ||||||| || |||| | || || || || || ||||| ||||| || Sbjct: 1479 tgttaagctttgtgctttcgaggatgctgaccaccgcacttacgtagatctcaaggataa 1538 Query: 1552 atggaagacgctggtgcacacggc 1575 |||||| |||||||| |||||||| Sbjct: 1539 atggaaaacgctggtccacacggc 1562 Score = 60.0 bits (30), Expect = 4e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 829 ccatgtgaaacttaagatcaaatctttcaaggtgcctgaacttctaattgagatcccaga 888 |||||||||||| |||||| || |||| ||||||||| ||| | || ||||| ||||| Sbjct: 873 ccatgtgaaactacggatcaagtcgttcagggtgcctgagcttttcatagagattccaga 932 Query: 889 aactgcttctgttggttcactgaaga 914 ||||||| ||||||| ||| |||||| Sbjct: 933 aactgctactgttggctcattgaaga 958
>gb|AY128382.1| Arabidopsis thaliana telomere repeat-binding protein (At5g59430) mRNA, complete cds Length = 2200 Score = 63.9 bits (32), Expect = 2e-06 Identities = 116/144 (80%) Strand = Plus / Plus Query: 1432 tgctgaagtggaagcacttgtgcttgcagtcgaaaagcttggaactggaagatggcgaga 1491 ||||||||| ||||||||||| | ||||| || || || || |||||||| ||| |||| Sbjct: 1632 tgctgaagtagaagcacttgttcaagcagttgagaaactcggtactggaaggtggagaga 1691 Query: 1492 tgttaaacttcgtgcttttgataatgccaagcatcggacctatgttgatcttaaggacaa 1551 |||||| ||| ||||||| || |||| | || || || || || ||||| ||||| || Sbjct: 1692 tgttaagctttgtgctttcgaggatgctgaccaccgcacttacgtagatctcaaggataa 1751 Query: 1552 atggaagacgctggtgcacacggc 1575 |||||| |||||||| |||||||| Sbjct: 1752 atggaaaacgctggtccacacggc 1775 Score = 60.0 bits (30), Expect = 4e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 829 ccatgtgaaacttaagatcaaatctttcaaggtgcctgaacttctaattgagatcccaga 888 |||||||||||| |||||| || |||| ||||||||| ||| | || ||||| ||||| Sbjct: 1086 ccatgtgaaactacggatcaagtcgttcagggtgcctgagcttttcatagagattccaga 1145 Query: 889 aactgcttctgttggttcactgaaga 914 ||||||| ||||||| ||| |||||| Sbjct: 1146 aactgctactgttggctcattgaaga 1171
>emb|X62653.1|HSBPF1 P.crispum BPF-1 mRNA Length = 2601 Score = 60.0 bits (30), Expect = 4e-05 Identities = 81/98 (82%) Strand = Plus / Plus Query: 1463 gaaaagcttggaactggaagatggcgagatgttaaacttcgtgcttttgataatgccaag 1522 |||| ||| ||||||||||| ||||| ||||| ||| | ||| | |||||| |||| || Sbjct: 2041 gaaacgctcggaactggaaggtggcgtgatgtaaaaatgcgttcctttgatgatgcaaac 2100 Query: 1523 catcggacctatgttgatcttaaggacaaatggaagac 1560 ||||| || ||||| ||| | ||||||||||||||||| Sbjct: 2101 catcgaacttatgtggatttgaaggacaaatggaagac 2138
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 58.0 bits (29), Expect = 1e-04 Identities = 35/37 (94%) Strand = Plus / Minus Query: 1545 aggacaaatggaagacgctggtgcacacggcgagcat 1581 ||||||| |||||||| |||||||||||||||||||| Sbjct: 35105004 aggacaagtggaagaccctggtgcacacggcgagcat 35104968 Score = 58.0 bits (29), Expect = 1e-04 Identities = 59/69 (85%) Strand = Plus / Minus Query: 845 atcaaatctttcaaggtgcctgaacttctaattgagatcccagaaactgcttctgttggt 904 |||||||||||||| | |||||||| |||||||||||||| |||| ||| | |||||| Sbjct: 35106478 atcaaatctttcaacatccctgaactactaattgagatccctgaaaatgcaacagttggt 35106419 Query: 905 tcactgaag 913 ||| ||||| Sbjct: 35106418 tcattgaag 35106410
>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1202_E07 Length = 145014 Score = 58.0 bits (29), Expect = 1e-04 Identities = 35/37 (94%) Strand = Plus / Minus Query: 1545 aggacaaatggaagacgctggtgcacacggcgagcat 1581 ||||||| |||||||| |||||||||||||||||||| Sbjct: 360 aggacaagtggaagaccctggtgcacacggcgagcat 324 Score = 58.0 bits (29), Expect = 1e-04 Identities = 59/69 (85%) Strand = Plus / Minus Query: 845 atcaaatctttcaaggtgcctgaacttctaattgagatcccagaaactgcttctgttggt 904 |||||||||||||| | |||||||| |||||||||||||| |||| ||| | |||||| Sbjct: 1834 atcaaatctttcaacatccctgaactactaattgagatccctgaaaatgcaacagttggt 1775 Query: 905 tcactgaag 913 ||| ||||| Sbjct: 1774 tcattgaag 1766
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C12 Length = 103973 Score = 58.0 bits (29), Expect = 1e-04 Identities = 35/37 (94%) Strand = Plus / Minus Query: 1545 aggacaaatggaagacgctggtgcacacggcgagcat 1581 ||||||| |||||||| |||||||||||||||||||| Sbjct: 78167 aggacaagtggaagaccctggtgcacacggcgagcat 78131 Score = 58.0 bits (29), Expect = 1e-04 Identities = 59/69 (85%) Strand = Plus / Minus Query: 845 atcaaatctttcaaggtgcctgaacttctaattgagatcccagaaactgcttctgttggt 904 |||||||||||||| | |||||||| |||||||||||||| |||| ||| | |||||| Sbjct: 79641 atcaaatctttcaacatccctgaactactaattgagatccctgaaaatgcaacagttggt 79582 Query: 905 tcactgaag 913 ||| ||||| Sbjct: 79581 tcattgaag 79573
>gb|AC022464.4|AC022464 Genomic sequence for Arabidopsis thaliana BAC F22G5 from chromosome I, complete sequence Length = 104830 Score = 56.0 bits (28), Expect = 6e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 1545 aggacaaatggaagacgctggtgcacac 1572 |||||||||||||||||||||||||||| Sbjct: 25447 aggacaaatggaagacgctggtgcacac 25474
>dbj|AK227016.1| Arabidopsis thaliana mRNA for telomeric DNA-binding protein 1, complete cds, clone: RAFL09-45-N14 Length = 2361 Score = 54.0 bits (27), Expect = 0.002 Identities = 84/103 (81%) Strand = Plus / Plus Query: 1470 ttggaactggaagatggcgagatgttaaacttcgtgcttttgataatgccaagcatcgga 1529 |||| |||||||||||||| ||||| || | ||| ||||||| ||||| | ||||| | Sbjct: 1833 ttgggactggaagatggcgtgatgtgaagttgcgttcttttgagaatgcaagtcatcgaa 1892 Query: 1530 cctatgttgatcttaaggacaaatggaagacgctggtgcacac 1572 ||||||| || | |||||||||||||| ||| |||| ||||| Sbjct: 1893 cctatgtggacttgaaggacaaatggaaaacgttggttcacac 1935
>ref|NM_001035745.1| Arabidopsis thaliana TRFL1 (TRF-LIKE 1); DNA binding (TRFL1) mRNA, complete cds Length = 2314 Score = 54.0 bits (27), Expect = 0.002 Identities = 81/98 (82%), Gaps = 2/98 (2%) Strand = Plus / Plus Query: 1523 catcggacctatgttgatcttaaggacaaatggaagacgctggtgcacacggcgagcatc 1582 ||||| |||||||||||||| |||| | |||||||||||||| |||||||| || || Sbjct: 1838 catcgtacctatgttgatctcaaggtta--tggaagacgctggtccacacggcaaggata 1895 Query: 1583 tcgccccagcagcggcgcggtgagccggtgccgcagga 1620 || || || |||||| | || ||||||||||| ||||| Sbjct: 1896 tctccacaacagcggagaggagagccggtgccacagga 1933
>ref|NM_121385.2| Arabidopsis thaliana TBP1 (TELOMERIC DNA BINDING PROTEIN 1); DNA binding (TBP1) mRNA, complete cds Length = 2527 Score = 54.0 bits (27), Expect = 0.002 Identities = 84/103 (81%) Strand = Plus / Plus Query: 1470 ttggaactggaagatggcgagatgttaaacttcgtgcttttgataatgccaagcatcgga 1529 |||| |||||||||||||| ||||| || | ||| ||||||| ||||| | ||||| | Sbjct: 1951 ttgggactggaagatggcgtgatgtgaagttgcgttcttttgagaatgcaagtcatcgaa 2010 Query: 1530 cctatgttgatcttaaggacaaatggaagacgctggtgcacac 1572 ||||||| || | |||||||||||||| ||| |||| ||||| Sbjct: 2011 cctatgtggacttgaaggacaaatggaaaacgttggttcacac 2053
>gb|AY029195.1| Arabidopsis thaliana telomeric DNA binding protein 1 (TBP1) mRNA, complete cds Length = 2474 Score = 54.0 bits (27), Expect = 0.002 Identities = 84/103 (81%) Strand = Plus / Plus Query: 1470 ttggaactggaagatggcgagatgttaaacttcgtgcttttgataatgccaagcatcgga 1529 |||| |||||||||||||| ||||| || | ||| ||||||| ||||| | ||||| | Sbjct: 1951 ttgggactggaagatggcgtgatgtgaagttgcgttcttttgagaatgcaagtcatcgaa 2010 Query: 1530 cctatgttgatcttaaggacaaatggaagacgctggtgcacac 1572 ||||||| || | |||||||||||||| ||| |||| ||||| Sbjct: 2011 cctatgtggacttgaaggacaaatggaaaacgttggttcacac 2053
>emb|BX832368.1|CNS0A1M8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH68ZD06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2543 Score = 54.0 bits (27), Expect = 0.002 Identities = 84/103 (81%) Strand = Plus / Plus Query: 1470 ttggaactggaagatggcgagatgttaaacttcgtgcttttgataatgccaagcatcgga 1529 |||| |||||||||||||| ||||| || | ||| ||||||| ||||| | ||||| | Sbjct: 1963 ttgggactggaagatggcgtgatgtgaagttgcgttcttttgagaatgcaagtcatcgaa 2022 Query: 1530 cctatgttgatcttaaggacaaatggaagacgctggtgcacac 1572 ||||||| || | |||||||||||||| ||| |||| ||||| Sbjct: 2023 cctatgtggacttgaaggacaaatggaaaacgttggttcacac 2065
>gb|AF072536.1|AF072536 Arabidopsis thaliana H-protein promoter binding factor-1 (HPPBF-1) mRNA, complete cds Length = 2497 Score = 54.0 bits (27), Expect = 0.002 Identities = 84/103 (81%) Strand = Plus / Plus Query: 1470 ttggaactggaagatggcgagatgttaaacttcgtgcttttgataatgccaagcatcgga 1529 |||| |||||||||||||| ||||| || | ||| ||||||| ||||| | ||||| | Sbjct: 1974 ttgggactggaagatggcgtgatgtgaagttgcgttcttttgagaatgcaagtcatcgaa 2033 Query: 1530 cctatgttgatcttaaggacaaatggaagacgctggtgcacac 1572 ||||||| || | |||||||||||||| ||| |||| ||||| Sbjct: 2034 cctatgtggacttgaaggacaaatggaaaacgttggttcacac 2076
>dbj|AK227790.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-35-O07 Length = 2445 Score = 52.0 bits (26), Expect = 0.009 Identities = 80/98 (81%) Strand = Plus / Plus Query: 1475 actggaagatggcgagatgttaaacttcgtgcttttgataatgccaagcatcggacctat 1534 |||||||||||||| ||||| ||| | |||||||| || |||| | |||||||| || Sbjct: 1872 actggaagatggcgtgatgtaaaattgcgtgctttcgaggatgcagatcatcggacttac 1931 Query: 1535 gttgatcttaaggacaaatggaagacgctggtgcacac 1572 || || | |||||||||||||||||||| || ||||| Sbjct: 1932 gtggacttgaaggacaaatggaagacgctagttcacac 1969
>ref|NM_112091.2| Arabidopsis thaliana TRFL9 (TRF-LIKE 9); DNA binding (TRFL9) mRNA, complete cds Length = 2435 Score = 52.0 bits (26), Expect = 0.009 Identities = 80/98 (81%) Strand = Plus / Plus Query: 1475 actggaagatggcgagatgttaaacttcgtgcttttgataatgccaagcatcggacctat 1534 |||||||||||||| ||||| ||| | |||||||| || |||| | |||||||| || Sbjct: 1872 actggaagatggcgtgatgtaaaattgcgtgctttcgaggatgcagatcatcggacttac 1931 Query: 1535 gttgatcttaaggacaaatggaagacgctggtgcacac 1572 || || | |||||||||||||||||||| || ||||| Sbjct: 1932 gtggacttgaaggacaaatggaagacgctagttcacac 1969
>gb|AY550302.1| Arabidopsis thaliana MYB transcription factor (AT3G12560) mRNA, complete cds Length = 1860 Score = 52.0 bits (26), Expect = 0.009 Identities = 80/98 (81%) Strand = Plus / Plus Query: 1475 actggaagatggcgagatgttaaacttcgtgcttttgataatgccaagcatcggacctat 1534 |||||||||||||| ||||| ||| | |||||||| || |||| | |||||||| || Sbjct: 1585 actggaagatggcgtgatgtaaaattgcgtgctttcgaggatgcagatcatcggacttac 1644 Query: 1535 gttgatcttaaggacaaatggaagacgctggtgcacac 1572 || || | |||||||||||||||||||| || ||||| Sbjct: 1645 gtggacttgaaggacaaatggaagacgctagttcacac 1682
>gb|BT006452.1| Arabidopsis thaliana At3g12560 gene, complete cds Length = 1860 Score = 52.0 bits (26), Expect = 0.009 Identities = 80/98 (81%) Strand = Plus / Plus Query: 1475 actggaagatggcgagatgttaaacttcgtgcttttgataatgccaagcatcggacctat 1534 |||||||||||||| ||||| ||| | |||||||| || |||| | |||||||| || Sbjct: 1585 actggaagatggcgtgatgtaaaattgcgtgctttcgaggatgcagatcatcggacttac 1644 Query: 1535 gttgatcttaaggacaaatggaagacgctggtgcacac 1572 || || | |||||||||||||||||||| || ||||| Sbjct: 1645 gtggacttgaaggacaaatggaagacgctagttcacac 1682
>dbj|AB025604.1| Arabidopsis thaliana genomic DNA, chromosome 5, BAC clone:F2O15 Length = 75125 Score = 52.0 bits (26), Expect = 0.009 Identities = 59/70 (84%) Strand = Plus / Plus Query: 844 gatcaaatctttcaaggtgcctgaacttctaattgagatcccagaaactgcttctgttgg 903 |||||| || |||| ||||||||| ||| | || ||||| |||||||||||| ||||||| Sbjct: 32972 gatcaagtcgttcagggtgcctgagcttttcatagagattccagaaactgctactgttgg 33031 Query: 904 ttcactgaag 913 ||| ||||| Sbjct: 33032 ctcattgaag 33041 Score = 42.1 bits (21), Expect = 8.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1424 ttctctgttgctgaagtggaagcacttgt 1452 ||||| ||||||||||| ||||||||||| Sbjct: 33654 ttctcagttgctgaagtagaagcacttgt 33682
>emb|Y17722.1|ATH17722 Arabidopsis thaliana trp1 gene Length = 4058 Score = 52.0 bits (26), Expect = 0.009 Identities = 59/70 (84%) Strand = Plus / Plus Query: 844 gatcaaatctttcaaggtgcctgaacttctaattgagatcccagaaactgcttctgttgg 903 |||||| || |||| ||||||||| ||| | || ||||| |||||||||||| ||||||| Sbjct: 2294 gatcaagtcgttcagggtgcctgagcttttcatagagattccagaaactgctactgttgg 2353 Query: 904 ttcactgaag 913 ||| ||||| Sbjct: 2354 ctcattgaag 2363 Score = 42.1 bits (21), Expect = 8.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1424 ttctctgttgctgaagtggaagcacttgt 1452 ||||| ||||||||||| ||||||||||| Sbjct: 2976 ttctcagttgctgaagtagaagcacttgt 3004
>gb|AY181997.1| Arabidopsis thaliana telomeric repeat-binding protein 3 (TRP3) mRNA, complete cds Length = 2268 Score = 50.1 bits (25), Expect = 0.036 Identities = 79/97 (81%) Strand = Plus / Plus Query: 1476 ctggaagatggcgagatgttaaacttcgtgcttttgataatgccaagcatcggacctatg 1535 ||||||||||||| ||||| ||| | |||||||| || |||| | |||||||| || | Sbjct: 1786 ctggaagatggcgtgatgtaaaattgcgtgctttcgaggatgcagatcatcggacttacg 1845 Query: 1536 ttgatcttaaggacaaatggaagacgctggtgcacac 1572 | || | |||||||||||||||||||| || ||||| Sbjct: 1846 tggacttgaaggacaaatggaagacgctagttcacac 1882
>gb|DQ275146.1| Boechera stricta At3g12480-like protein, At3g12490-like protein, At3g12500-like protein, At3g12510-like protein, At3g12520-like protein, At3g12530-like protein, At3g12540-like protein, unknown protein, At3g12550-like protein, and At3g12560-like protein genes, complete cds Length = 25412 Score = 48.1 bits (24), Expect = 0.14 Identities = 27/28 (96%) Strand = Plus / Minus Query: 1545 aggacaaatggaagacgctggtgcacac 1572 |||||||||||||||||||||| ||||| Sbjct: 24853 aggacaaatggaagacgctggttcacac 24826
>ref|NM_103882.2| Arabidopsis thaliana DNA binding / transcription factor (AT1G49950) mRNA, complete cds Length = 1290 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1533 atgttgatcttaaggacaaatgga 1556 |||||||||||||||||||||||| Sbjct: 254 atgttgatcttaaggacaaatgga 277
>ref|NM_202269.1| Arabidopsis thaliana DNA binding (AT1G49950) mRNA, complete cds Length = 1481 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1533 atgttgatcttaaggacaaatgga 1556 |||||||||||||||||||||||| Sbjct: 440 atgttgatcttaaggacaaatgga 463
>ref|NM_179458.1| Arabidopsis thaliana DNA binding / transcription factor (AT1G49950) mRNA, complete cds Length = 1383 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1533 atgttgatcttaaggacaaatgga 1556 |||||||||||||||||||||||| Sbjct: 281 atgttgatcttaaggacaaatgga 304
>ref|NM_126158.2| Arabidopsis thaliana DNA binding / transcription factor (AT5G67580) mRNA, complete cds Length = 1720 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1533 atgttgatcttaaggacaaatgga 1556 |||||||||||||||||||||||| Sbjct: 249 atgttgatcttaaggacaaatgga 272
>ref|NM_180955.1| Arabidopsis thaliana DNA binding / transcription factor (AT5G67580) mRNA, complete cds Length = 1799 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1533 atgttgatcttaaggacaaatgga 1556 |||||||||||||||||||||||| Sbjct: 328 atgttgatcttaaggacaaatgga 351
>gb|AY519545.1| Arabidopsis thaliana MYB transcription factor (At5g67580) mRNA, complete cds Length = 900 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1533 atgttgatcttaaggacaaatgga 1556 |||||||||||||||||||||||| Sbjct: 137 atgttgatcttaaggacaaatgga 160
>gb|AY519539.1| Arabidopsis thaliana MYB transcription factor (At1g49950) mRNA, complete cds Length = 903 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1533 atgttgatcttaaggacaaatgga 1556 |||||||||||||||||||||||| Sbjct: 137 atgttgatcttaaggacaaatgga 160
>gb|BT009677.1| Arabidopsis thaliana At1g49950 mRNA, complete cds Length = 903 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1533 atgttgatcttaaggacaaatgga 1556 |||||||||||||||||||||||| Sbjct: 137 atgttgatcttaaggacaaatgga 160
>gb|AY077668.1| Arabidopsis thaliana AT5g67580/K9I9_15 mRNA, complete cds Length = 900 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1533 atgttgatcttaaggacaaatgga 1556 |||||||||||||||||||||||| Sbjct: 137 atgttgatcttaaggacaaatgga 160
>gb|U83837.1|ATU83837 Arabidopsis thaliana telomere repeat binding factor 2 (TRB2), complete cds Length = 1435 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1533 atgttgatcttaaggacaaatgga 1556 |||||||||||||||||||||||| Sbjct: 330 atgttgatcttaaggacaaatgga 353
>gb|AY062736.1| Arabidopsis thaliana Unknown protein (At1g49950; F2J10.16) mRNA, complete cds Length = 1238 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1533 atgttgatcttaaggacaaatgga 1556 |||||||||||||||||||||||| Sbjct: 276 atgttgatcttaaggacaaatgga 299
>gb|AY062489.1| Arabidopsis thaliana telomere repeat-binding protein homolog (At3g46590; F12A12.110) mRNA, complete cds Length = 2507 Score = 48.1 bits (24), Expect = 0.14 Identities = 57/68 (83%) Strand = Plus / Plus Query: 1553 tggaagacgctggtgcacacggcgagcatctcgccccagcagcggcgcggtgagccggtg 1612 |||||||||||||| |||||||| || || || || || |||||| | || ||||||||| Sbjct: 2176 tggaagacgctggtccacacggcaaggatatctccacaacagcggagaggagagccggtg 2235 Query: 1613 ccgcagga 1620 || ||||| Sbjct: 2236 ccacagga 2243
>gb|AY039883.1| Arabidopsis thaliana AT5g67580/K9I9_15 mRNA, complete cds Length = 1421 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1533 atgttgatcttaaggacaaatgga 1556 |||||||||||||||||||||||| Sbjct: 327 atgttgatcttaaggacaaatgga 350
>gb|AC093038.4| Homo sapiens BAC clone RP13-541C6 from 2, complete sequence Length = 93111 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Minus Query: 2180 ctttttcctgttttttcttcttct 2203 |||||||||||||||||||||||| Sbjct: 632 ctttttcctgttttttcttcttct 609
>gb|AC104058.4| Homo sapiens BAC clone RP13-513D10 from 2, complete sequence Length = 122230 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Minus Query: 2180 ctttttcctgttttttcttcttct 2203 |||||||||||||||||||||||| Sbjct: 120862 ctttttcctgttttttcttcttct 120839
>emb|BX814217.1|CNS0ADFP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB61ZD04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1381 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1533 atgttgatcttaaggacaaatgga 1556 |||||||||||||||||||||||| Sbjct: 397 atgttgatcttaaggacaaatgga 420
>emb|BX813360.1|CNS0ADHK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB12ZC02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1466 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1533 atgttgatcttaaggacaaatgga 1556 |||||||||||||||||||||||| Sbjct: 440 atgttgatcttaaggacaaatgga 463
>emb|BX832238.1|CNS0A24N Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZD01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1290 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1533 atgttgatcttaaggacaaatgga 1556 |||||||||||||||||||||||| Sbjct: 306 atgttgatcttaaggacaaatgga 329
>emb|BX829854.1|CNS0A25P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB40ZG09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1392 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1533 atgttgatcttaaggacaaatgga 1556 |||||||||||||||||||||||| Sbjct: 302 atgttgatcttaaggacaaatgga 325
>emb|BX831132.1|CNS0A0OZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS5ZG09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1310 Score = 48.1 bits (24), Expect = 0.14 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1533 atgttgatcttaaggacaaatgga 1556 |||||||||||||||||||||||| Sbjct: 244 atgttgatcttaaggacaaatgga 267
>emb|AL133314.1|ATF12A12 Arabidopsis thaliana DNA chromosome 3, BAC clone F12A12 Length = 100815 Score = 48.1 bits (24), Expect = 0.14 Identities = 57/68 (83%) Strand = Plus / Plus Query: 1553 tggaagacgctggtgcacacggcgagcatctcgccccagcagcggcgcggtgagccggtg 1612 |||||||||||||| |||||||| || || || || || |||||| | || ||||||||| Sbjct: 54881 tggaagacgctggtccacacggcaaggatatctccacaacagcggagaggagagccggtg 54940 Query: 1613 ccgcagga 1620 || ||||| Sbjct: 54941 ccacagga 54948
>emb|CR792420.9| Zebrafish DNA sequence from clone DKEY-34K9, complete sequence Length = 129569 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1910 aactattcttttaagccagggtt 1932 ||||||||||||||||||||||| Sbjct: 30821 aactattcttttaagccagggtt 30843
>gb|CP000210.2| Drosophila melanogaster genomic scaffold 211000022280749 Length = 444310 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Minus Query: 2267 tacttgatcaactaacaatatta 2289 ||||||||||||||||||||||| Sbjct: 247322 tacttgatcaactaacaatatta 247300
>emb|AL445310.9| Human DNA sequence from clone RP11-61P11 on chromosome 9, complete sequence Length = 175993 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1248 ggaatgatcatgattcagtgcactctc 1274 ||||||||||||||||| ||||||||| Sbjct: 155676 ggaatgatcatgattcactgcactctc 155650
>emb|BX548072.14| Zebrafish DNA sequence from clone DKEYP-84A8 in linkage group 22, complete sequence Length = 188936 Score = 46.1 bits (23), Expect = 0.57 Identities = 23/23 (100%) Strand = Plus / Plus Query: 2168 atctgtgctcccctttttcctgt 2190 ||||||||||||||||||||||| Sbjct: 118425 atctgtgctcccctttttcctgt 118447
>gb|AC006239.5|AC006239 Homo sapiens chromosome 9, clone hRPK.467_F_21, complete sequence Length = 195032 Score = 46.1 bits (23), Expect = 0.57 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1248 ggaatgatcatgattcagtgcactctc 1274 ||||||||||||||||| ||||||||| Sbjct: 80333 ggaatgatcatgattcactgcactctc 80359
>gb|AC190133.3| Pan troglodytes BAC clone CH251-424O1 from chromosome 16, complete sequence Length = 160820 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1821 aagatagtagaaaaaaatatat 1842 |||||||||||||||||||||| Sbjct: 149930 aagatagtagaaaaaaatatat 149951
>ref|XM_636721.1| Dictyostelium discoideum AX4 putative asparaginase 2 (DDB_0230992) mRNA, complete cds Length = 1041 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 696 ctgaagaatttgcaaaatcaaa 717 |||||||||||||||||||||| Sbjct: 383 ctgaagaatttgcaaaatcaaa 404
>gb|AC121298.10| Mus musculus chromosome 5, clone RP23-377E6, complete sequence Length = 194045 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1951 aaccaaaggaaagggtatttctttgg 1976 |||||||| ||||||||||||||||| Sbjct: 66700 aaccaaagaaaagggtatttctttgg 66675
>gb|AC123057.4| Mus musculus BAC clone RP23-184N6 from 3, complete sequence Length = 223068 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1751 taagaaaccatcccagcttttg 1772 |||||||||||||||||||||| Sbjct: 55639 taagaaaccatcccagcttttg 55618
>gb|AC021709.12| Mus musculus chromosome 10, clone RP23-194I3, complete sequence Length = 319367 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1824 atagtagaaaaaaatatatata 1845 |||||||||||||||||||||| Sbjct: 306519 atagtagaaaaaaatatatata 306540
>emb|CT025708.8| Mouse DNA sequence from clone RP24-331C1 on chromosome 17, complete sequence Length = 205598 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1825 tagtagaaaaaaatatatatac 1846 |||||||||||||||||||||| Sbjct: 72392 tagtagaaaaaaatatatatac 72413
>emb|CR524826.13| Zebrafish DNA sequence from clone CH211-227A6 in linkage group 16, complete sequence Length = 136920 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1824 atagtagaaaaaaatatatata 1845 |||||||||||||||||||||| Sbjct: 90189 atagtagaaaaaaatatatata 90210
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2182 ttttcctgttttttcttcttct 2203 |||||||||||||||||||||| Sbjct: 21279570 ttttcctgttttttcttcttct 21279591
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1591 gcagcggcgcggtgagccggtg 1612 |||||||||||||||||||||| Sbjct: 3499212 gcagcggcgcggtgagccggtg 3499191
>emb|AL669838.22| Mouse DNA sequence from clone RP23-324A4 on chromosome 11 Contains the Adcy1 gene for adenylate cyclase 1, a novel gene and a CpG island, complete sequence Length = 189132 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1778 agtcagtaagtcagccagtcag 1799 |||||||||||||||||||||| Sbjct: 98118 agtcagtaagtcagccagtcag 98139
>emb|BX247888.10| Zebrafish DNA sequence from clone DKEY-10D15 in linkage group 9, complete sequence Length = 223425 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1824 atagtagaaaaaaatatatata 1845 |||||||||||||||||||||| Sbjct: 89253 atagtagaaaaaaatatatata 89232
>dbj|AP005862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0038K02 Length = 118635 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2182 ttttcctgttttttcttcttct 2203 |||||||||||||||||||||| Sbjct: 11949 ttttcctgttttttcttcttct 11970
>gb|AC137056.3| Homo sapiens chromosome 16 clone CTD-2194A8, complete sequence Length = 131451 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1821 aagatagtagaaaaaaatatat 1842 |||||||||||||||||||||| Sbjct: 21242 aagatagtagaaaaaaatatat 21263
>emb|BX823921.1|CNS0A4V9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZD06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2222 Score = 44.1 bits (22), Expect = 2.2 Identities = 79/98 (80%) Strand = Plus / Plus Query: 1475 actggaagatggcgagatgttaaacttcgtgcttttgataatgccaagcatcggacctat 1534 |||||||||||||| ||||| ||| | |||||| | || |||| | |||||||| || Sbjct: 1700 actggaagatggcgtgatgtaaaattgcgtgctctcgaggatgcagatcatcggacttac 1759 Query: 1535 gttgatcttaaggacaaatggaagacgctggtgcacac 1572 || || | |||||||||||||||||||| || ||||| Sbjct: 1760 gtggacttgaaggacaaatggaagacgctagttcacac 1797
>emb|X68337.1|PCBPF1 P.crispum BPF-1 gene for DNA-binding protein Length = 5777 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2124 tctttgttaagaggatgagaaa 2145 |||||||||||||||||||||| Sbjct: 4463 tctttgttaagaggatgagaaa 4484
>gb|AC122545.13| Mus musculus chromosome 5, clone RP23-324H16, complete sequence Length = 202586 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1820 gaagatagtagaaaaaaatatatata 1845 ||||||||||||| |||||||||||| Sbjct: 78274 gaagatagtagaagaaaatatatata 78249
>gb|AC136876.2| Homo sapiens chromosome 16 clone CTD-2372O23, complete sequence Length = 73074 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1821 aagatagtagaaaaaaatatat 1842 |||||||||||||||||||||| Sbjct: 68668 aagatagtagaaaaaaatatat 68647
>gb|AC153959.3| Mus musculus 10 BAC RP24-511J14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 165278 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1824 atagtagaaaaaaatatatata 1845 |||||||||||||||||||||| Sbjct: 42985 atagtagaaaaaaatatatata 43006
>ref|XM_001024936.1| Tetrahymena thermophila SB210 acetyltransferase, GNAT family protein (TTHERM_00242120) mRNA, complete cds Length = 1932 Score = 42.1 bits (21), Expect = 8.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 703 atttgcaaaatcaaatgcaaagaga 727 |||||| |||||||||||||||||| Sbjct: 654 atttgctaaatcaaatgcaaagaga 630
>ref|XM_426039.2| PREDICTED: Gallus gallus phenylalanine-tRNA synthetase 2 (mitochondrial) (FARS2), mRNA Length = 1749 Score = 42.1 bits (21), Expect = 8.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2181 tttttcctgttttttcttcttctgt 2205 ||||| ||||||||||||||||||| Sbjct: 1583 ttttttctgttttttcttcttctgt 1607
>emb|CR855103.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0718E12, complete sequence Length = 90431 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 839 cttaagatcaaatctttcaag 859 ||||||||||||||||||||| Sbjct: 6253 cttaagatcaaatctttcaag 6273
>emb|CR352234.11| Zebrafish DNA sequence from clone DKEY-93L1 in linkage group 23, complete sequence Length = 198117 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 699 aagaatttgcaaaatcaaatg 719 ||||||||||||||||||||| Sbjct: 101570 aagaatttgcaaaatcaaatg 101590
>ref|XM_001172898.1| PREDICTED: Pan troglodytes hypothetical protein LOC747399, transcript variant 2 (LOC747400), mRNA Length = 3177 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2280 aacaatattaaaggatttttt 2300 ||||||||||||||||||||| Sbjct: 59 aacaatattaaaggatttttt 39
>ref|NM_001078917.1| Xenopus tropicalis netrin 1 (unc-6), mRNA gb|BC121568.1| Xenopus tropicalis netrin 1, mRNA (cDNA clone MGC:147073 IMAGE:7717948), complete cds Length = 2527 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 970 tcttcaccatggaaagaaaat 990 ||||||||||||||||||||| Sbjct: 934 tcttcaccatggaaagaaaat 954
>gb|AC184820.6| Canis Familiaris chromosome 21, clone XX-43D15, complete sequence Length = 228307 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1746 tctcttaagaaaccatcccag 1766 ||||||||||||||||||||| Sbjct: 147010 tctcttaagaaaccatcccag 146990
>emb|CT573100.6| Mouse DNA sequence from clone RP23-218E7 on chromosome 12, complete sequence Length = 183966 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1903 actcaccaactattcttttaa 1923 ||||||||||||||||||||| Sbjct: 130658 actcaccaactattcttttaa 130638
>gb|DQ481667.1| Takifugu rubripes HoxCa gene cluster, complete sequence Length = 378763 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2181 tttttcctgttttttcttctt 2201 ||||||||||||||||||||| Sbjct: 48015 tttttcctgttttttcttctt 48035
>ref|XM_634220.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0185319) mRNA, complete cds Length = 1230 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1127 gaaactgttgaaactactgaa 1147 ||||||||||||||||||||| Sbjct: 610 gaaactgttgaaactactgaa 630
>gb|AC123720.32| Mus musculus chromosome 10, clone RP23-413G8, complete sequence Length = 192037 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1956 aaggaaagggtatttctttgg 1976 ||||||||||||||||||||| Sbjct: 3623 aaggaaagggtatttctttgg 3603
>gb|AE014831.1| Plasmodium falciparum 3D7 chromosome 10 section 3 of 7 of the complete sequence Length = 250195 Score = 42.1 bits (21), Expect = 8.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2101 ttcttttgttcagttcaattcattc 2125 |||||||||||||| |||||||||| Sbjct: 137948 ttcttttgttcagtacaattcattc 137924
>gb|AC164641.5| Mus musculus BAC clone RP23-393F10 from chromosome 12, complete sequence Length = 198725 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 agtcaggggccttcactgggg 188 ||||||||||||||||||||| Sbjct: 27369 agtcaggggccttcactgggg 27389
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1608 cggtgccgcaggatctgctcg 1628 ||||||||||||||||||||| Sbjct: 314912 cggtgccgcaggatctgctcg 314932
>gb|AC119884.13| Mus musculus chromosome 15, clone RP24-213O5, complete sequence Length = 168400 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1828 tagaaaaaaatatatatacta 1848 ||||||||||||||||||||| Sbjct: 4747 tagaaaaaaatatatatacta 4767
>ref|XM_880079.1| PREDICTED: Bos taurus similar to epsin 2 isoform b, transcript variant 3 (LOC505336), mRNA Length = 3933 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 373 tccgaaaggaggagcagagtg 393 ||||||||||||||||||||| Sbjct: 3453 tccgaaaggaggagcagagtg 3433
>ref|XM_581611.2| PREDICTED: Bos taurus similar to epsin 2 isoform b, transcript variant 1 (LOC505336), mRNA Length = 4104 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 373 tccgaaaggaggagcagagtg 393 ||||||||||||||||||||| Sbjct: 3624 tccgaaaggaggagcagagtg 3604
>ref|XM_880030.1| PREDICTED: Bos taurus similar to epsin 2 isoform b, transcript variant 2 (LOC505336), mRNA Length = 4101 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 373 tccgaaaggaggagcagagtg 393 ||||||||||||||||||||| Sbjct: 3621 tccgaaaggaggagcagagtg 3601
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1608 cggtgccgcaggatctgctcg 1628 ||||||||||||||||||||| Sbjct: 1045842 cggtgccgcaggatctgctcg 1045862
>gb|AC005995.3| Homo sapiens PAC clone RP1-42M2 from 7, complete sequence Length = 80010 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1825 tagtagaaaaaaatatatata 1845 ||||||||||||||||||||| Sbjct: 48527 tagtagaaaaaaatatatata 48507
>gb|AC159648.2| Mus musculus BAC clone RP23-38A15 from chromosome 12, complete sequence Length = 156190 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 agtcaggggccttcactgggg 188 ||||||||||||||||||||| Sbjct: 142224 agtcaggggccttcactgggg 142244
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1616 caggatctgctcgaccgggtc 1636 ||||||||||||||||||||| Sbjct: 1756530 caggatctgctcgaccgggtc 1756550
>gb|AC117588.11| Mus musculus chromosome 15, clone RP23-177B8, complete sequence Length = 211177 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 929 gcagtaaatgccatgcttgga 949 ||||||||||||||||||||| Sbjct: 196547 gcagtaaatgccatgcttgga 196527
>gb|AC091429.3| Homo sapiens chromosome 5 clone CTD-2161E19, complete sequence Length = 51428 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1825 tagtagaaaaaaatatatata 1845 ||||||||||||||||||||| Sbjct: 49677 tagtagaaaaaaatatatata 49657
>emb|CR848816.11| Zebrafish DNA sequence from clone DKEY-99F10 in linkage group 11, complete sequence Length = 158354 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2220 attttcccttcaccaatcttg 2240 ||||||||||||||||||||| Sbjct: 28986 attttcccttcaccaatcttg 28966
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 839 cttaagatcaaatctttcaag 859 ||||||||||||||||||||| Sbjct: 19354531 cttaagatcaaatctttcaag 19354551
>emb|CR524825.5| Zebrafish DNA sequence from clone CH211-15N24 in linkage group 16, complete sequence Length = 134382 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2220 attttcccttcaccaatcttg 2240 ||||||||||||||||||||| Sbjct: 59755 attttcccttcaccaatcttg 59735
>emb|AL662889.5| Human DNA sequence from clone RP11-370K11 on chromosome 1 Contains a fatty acid binding protein, muscle and heart (mammary-derived growth inhibitor) pseudogene and part of the AKT3 gene for v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma), complete sequence Length = 127036 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2020 tcattccatgaactgagatct 2040 ||||||||||||||||||||| Sbjct: 109837 tcattccatgaactgagatct 109817
>emb|AL445423.13| Human DNA sequence from clone RP11-295M18 on chromosome 1 Contains the 3' end of a novel gene (FLJ22390), two novel genes, the HLX1 gene for H2.0-like homeo box 1 (Drosophila) and four CpG islands, complete sequence Length = 177941 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2280 aacaatattaaaggatttttt 2300 ||||||||||||||||||||| Sbjct: 4673 aacaatattaaaggatttttt 4653
>emb|AL158064.16| Human DNA sequence from clone RP11-470M1 on chromosome 13, complete sequence Length = 160587 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2209 ttagttgtactattttccctt 2229 ||||||||||||||||||||| Sbjct: 52093 ttagttgtactattttccctt 52113
>emb|AL136141.13| Human DNA sequence from clone RP11-138E2 on chromosome 9q34.11-34.3 Contains the 5' end of the FNBP1 gene for formin binding protein 1 (FBP17), the GPR107 gene for G protein-coupled receptor 107 (LUSTR1) and three CpG islands, complete sequence Length = 127883 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 917 actgttctggaggcagtaaat 937 ||||||||||||||||||||| Sbjct: 57824 actgttctggaggcagtaaat 57804
>emb|AL031431.8|HS462O23 Human DNA sequence from clone RP3-462O23 on chromosome 1p35.1-36.12 Contains the 3' end of the gene for sister-of-mammalian grainyhead (SOM), a novel gene (LOC90529) and a novel gene (DJ462O23.2), complete sequence Length = 154154 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 aggctgtggacaaggagccct 89 ||||||||||||||||||||| Sbjct: 136355 aggctgtggacaaggagccct 136335
>emb|BX890540.5| Zebrafish DNA sequence from clone DKEY-211C3 in linkage group 19, complete sequence Length = 170919 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1831 aaaaaaatatatatactacat 1851 ||||||||||||||||||||| Sbjct: 96542 aaaaaaatatatatactacat 96562
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1608 cggtgccgcaggatctgctcg 1628 ||||||||||||||||||||| Sbjct: 926859 cggtgccgcaggatctgctcg 926879
>emb|AL731600.3|OSJN00243 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0055C08, complete sequence Length = 145670 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 839 cttaagatcaaatctttcaag 859 ||||||||||||||||||||| Sbjct: 136363 cttaagatcaaatctttcaag 136383
>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14, complete sequence Length = 139855 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 839 cttaagatcaaatctttcaag 859 ||||||||||||||||||||| Sbjct: 5783 cttaagatcaaatctttcaag 5803
>emb|AJ577918.1|HIM577918 Human immunodeficiency virus 1 partial pol gene for pol polyprotein, genomic RNA, isolate 01FR-KAF-715 Length = 1033 Score = 42.1 bits (21), Expect = 8.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1729 cccatctcagcaaatggtctcttaa 1753 |||||||||||||||| |||||||| Sbjct: 934 cccatctcagcaaatgttctcttaa 910
>gb|AC026029.8| Homo sapiens BAC clone RP11-16G16 from 4, complete sequence Length = 173067 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2145 aggtggaaggataaggaggga 2165 ||||||||||||||||||||| Sbjct: 123281 aggtggaaggataaggaggga 123261
>gb|AC090884.1|AC090884 Homo sapiens chromosome 3 clone RP11-165B2 map 3p, complete sequence Length = 166991 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1944 tgaatttaaccaaaggaaagg 1964 ||||||||||||||||||||| Sbjct: 54595 tgaatttaaccaaaggaaagg 54615
>gb|AC019330.3| Homo sapiens BAC clone RP11-81N16 from 2, complete sequence Length = 167777 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1828 tagaaaaaaatatatatacta 1848 ||||||||||||||||||||| Sbjct: 128724 tagaaaaaaatatatatacta 128704
>dbj|AB007649.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MLE2 Length = 58527 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2233 caatcttgtagttattttgat 2253 ||||||||||||||||||||| Sbjct: 31412 caatcttgtagttattttgat 31392
>gb|AC090646.2| Homo sapiens chromosome 3 clone RP11-690A6 map 3p, complete sequence Length = 165681 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1944 tgaatttaaccaaaggaaagg 1964 ||||||||||||||||||||| Sbjct: 22679 tgaatttaaccaaaggaaagg 22699
>gb|AC069462.3| Homo sapiens chromosome 3 clone RP11-271E2 map 3p, complete sequence Length = 161577 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1944 tgaatttaaccaaaggaaagg 1964 ||||||||||||||||||||| Sbjct: 143809 tgaatttaaccaaaggaaagg 143829
>gb|AC119914.10| Mus musculus chromosome 15, clone RP24-244H15, complete sequence Length = 213223 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1828 tagaaaaaaatatatatacta 1848 ||||||||||||||||||||| Sbjct: 58615 tagaaaaaaatatatatacta 58595
>emb|BX649265.5| Zebrafish DNA sequence from clone CH211-134G22 in linkage group 16, complete sequence Length = 178901 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2220 attttcccttcaccaatcttg 2240 ||||||||||||||||||||| Sbjct: 31253 attttcccttcaccaatcttg 31233
>emb|BX934065.2| Gallus gallus finished cDNA, clone ChEST61d23 Length = 1726 Score = 42.1 bits (21), Expect = 8.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2181 tttttcctgttttttcttcttctgt 2205 ||||| ||||||||||||||||||| Sbjct: 1582 ttttttctgttttttcttcttctgt 1606
>gb|AC102033.9| Mus musculus chromosome 15, clone RP23-86G8, complete sequence Length = 202269 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 929 gcagtaaatgccatgcttgga 949 ||||||||||||||||||||| Sbjct: 170630 gcagtaaatgccatgcttgga 170650
>gb|AC006241.1|AC006241 Homo sapiens chromosome 9, clone hRPK.202_H_3, complete sequence Length = 187174 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 917 actgttctggaggcagtaaat 937 ||||||||||||||||||||| Sbjct: 9833 actgttctggaggcagtaaat 9813
>gb|AC114966.2| Homo sapiens chromosome 5 clone RP11-291O24, complete sequence Length = 155461 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1825 tagtagaaaaaaatatatata 1845 ||||||||||||||||||||| Sbjct: 24945 tagtagaaaaaaatatatata 24925
>ref|XM_719989.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY04745) partial mRNA Length = 240 Score = 42.1 bits (21), Expect = 8.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1778 agtcagtaagtcagccagtcagccc 1802 ||||||| ||||||||||||||||| Sbjct: 21 agtcagtcagtcagccagtcagccc 45
>gb|AC132304.3| Mus musculus BAC clone RP24-284M17 from 10, complete sequence Length = 191906 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1956 aaggaaagggtatttctttgg 1976 ||||||||||||||||||||| Sbjct: 18657 aaggaaagggtatttctttgg 18677
>emb|AL845303.11| Zebrafish DNA sequence from clone CH211-146K13 in linkage group 1, complete sequence Length = 54016 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1778 agtcagtaagtcagccagtca 1798 ||||||||||||||||||||| Sbjct: 3421 agtcagtaagtcagccagtca 3401
>emb|AL732564.12| Mouse DNA sequence from clone RP23-442G9 on chromosome 2, complete sequence Length = 211657 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1221 tgacacccttgacagctaatt 1241 ||||||||||||||||||||| Sbjct: 108607 tgacacccttgacagctaatt 108627
>dbj|AB026051.1| Plasmodium falciparum mRNA for enolase, complete cds Length = 1341 Score = 42.1 bits (21), Expect = 8.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2101 ttcttttgttcagttcaattcattc 2125 |||||||||||||| |||||||||| Sbjct: 266 ttcttttgttcagtacaattcattc 242
>gb|M97348.1|RABH19MYOH Oryctolagus cuniculus H19/myoH mRNA sequence Length = 1842 Score = 42.1 bits (21), Expect = 8.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 gaggttccaaaggcaaagtct 67 ||||||||||||||||||||| Sbjct: 1251 gaggttccaaaggcaaagtct 1231
>gb|U00152.1|PFAENOL1 Plasmodium falciparum enolase gene complete cds Length = 1341 Score = 42.1 bits (21), Expect = 8.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2101 ttcttttgttcagttcaattcattc 2125 |||||||||||||| |||||||||| Sbjct: 266 ttcttttgttcagtacaattcattc 242 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 467,485,994 Number of extensions: 25982504 Number of successful extensions: 229091 Number of sequences better than 10.0: 160 Number of HSP's gapped: 229049 Number of HSP's successfully gapped: 267 Length of query: 2321 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2298 Effective length of database: 18,503,978,556 Effective search space: 42522142721688 Effective search space used: 42522142721688 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
