ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf93p01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001054140.1| Oryza sativa (japonica cultivar-group) Os02g... 94 7e-16
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 94 7e-16
3dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic D... 94 7e-16
4emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chro... 94 7e-16
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 62 3e-06
6dbj|AP004375.3| Oryza sativa (japonica cultivar-group) genomic D... 62 3e-06
7dbj|AP005726.2| Oryza sativa (japonica cultivar-group) genomic D... 62 3e-06
8ref|NM_001060004.1| Oryza sativa (japonica cultivar-group) Os04g... 44 0.61
9emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 44 0.61
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.61
11ref|NM_001045703.1| Xenopus tropicalis novel La domain and RNA r... 44 0.61
12gb|AE009222.1| Agrobacterium tumefaciens str. C58 circular chrom... 42 2.4
13gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 42 2.4
14gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome 42 2.4
15ref|NM_001074578.1| Oryza sativa (japonica cultivar-group) Os11g... 40 9.5
16ref|NM_001065416.1| Oryza sativa (japonica cultivar-group) Os07g... 40 9.5
17ref|XM_001211656.1| Aspergillus terreus NIH2624 conserved hypoth... 40 9.5
18emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 9.5
19gb|AC108223.5| Oryza sativa (japonica cultivar-group) chromosome... 40 9.5
20gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 9.5
21ref|XM_597376.2| PREDICTED: Bos taurus similar to Transcription ... 40 9.5
22gb|AE008934.1| Agrobacterium tumefaciens str. C58 AT plasmid sec... 40 9.5
23gb|AE007882.1| Agrobacterium tumefaciens str. C58 plasmid AT, se... 40 9.5
24ref|XM_542195.2| PREDICTED: Canis familiaris similar to Kruppel-... 40 9.5
25ref|XM_388011.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 9.5
26gb|AC117838.1| Caenorhabditis briggsae cosmid CB005E21, complete... 40 9.5
27dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
28dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
29dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
30emb|AL513542.11| Human DNA sequence from clone RP11-129J12 on ch... 40 9.5
31emb|AL354872.9| Human DNA sequence from clone RP11-42O15 on chro... 40 9.5
32gb|AC160099.1| Unidentified bacterium clone zdt-45e5, complete s... 40 9.5
33gb|AC154685.2| Mus musculus BAC clone RP24-321G16 from chromosom... 40 9.5
34dbj|AP004651.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
35dbj|AK070362.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.5
36dbj|AK070175.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.5
37dbj|AP003824.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.5
38gb|AC005940.3|AC005940 Homo sapiens chromosome 17, clone hRPK.16... 40 9.5
39gb|AC165153.2| Mus musculus BAC clone RP23-359L1 from chromosome... 40 9.5 
>ref|NM_001054140.1| Oryza sativa (japonica cultivar-group) Os02g0653400 (Os02g0653400)
           mRNA, complete cds
          Length = 1338
 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 59/63 (93%)
 Strand = Plus / Plus

                                                                       
Query: 275 cccggagatggcgggcaggctccggcgccgcgccgacgggtcgtgggacgtgaagctgaa 334
           |||||||||||| ||| ||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 444 cccggagatggccggccggctccgccgccgcgccgacgggtcgtgggaggtgaagctgaa 503

              
Query: 335 cga 337
           |||
Sbjct: 504 cga 506



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 120/147 (81%)
 Strand = Plus / Plus

                                                                       
Query: 70  tccacatcgagtccgtacagacggccttaccgacccgtgtcgtccagcccgacaggacgc 129
           ||||||||||| |||| ||||||||  | ||||| || |||||  ||||||  |||||||
Sbjct: 227 tccacatcgaggccgtgcagacggcggtgccgacgcgcgtcgtggagcccgggaggacgc 286

                                                                       
Query: 130 gtctcatcgccgtgacctcgccgccgctaccggagactgtgctgcagcatcgcctccgcg 189
           | ||| |||||||| |  |||||||||| |||| | | | ||||||||  ||| ||||||
Sbjct: 287 gcctcgtcgccgtggcggcgccgccgctcccggcgcccgcgctgcagcgccgcgtccgcg 346

                                      
Query: 190 cggtcctctactaccgcgccgacggcg 216
           |||| ||||||||||||| || |||||
Sbjct: 347 cggtgctctactaccgcggcgccggcg 373
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 59/63 (93%)
 Strand = Plus / Minus

                                                                            
Query: 275      cccggagatggcgggcaggctccggcgccgcgccgacgggtcgtgggacgtgaagctgaa 334
                |||||||||||| ||| ||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 26371590 cccggagatggccggccggctccgccgccgcgccgacgggtcgtgggaggtgaagctgaa 26371531

                   
Query: 335      cga 337
                |||
Sbjct: 26371530 cga 26371528



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 120/147 (81%)
 Strand = Plus / Minus

                                                                            
Query: 70       tccacatcgagtccgtacagacggccttaccgacccgtgtcgtccagcccgacaggacgc 129
                ||||||||||| |||| ||||||||  | ||||| || |||||  ||||||  |||||||
Sbjct: 26371807 tccacatcgaggccgtgcagacggcggtgccgacgcgcgtcgtggagcccgggaggacgc 26371748

                                                                            
Query: 130      gtctcatcgccgtgacctcgccgccgctaccggagactgtgctgcagcatcgcctccgcg 189
                | ||| |||||||| |  |||||||||| |||| | | | ||||||||  ||| ||||||
Sbjct: 26371747 gcctcgtcgccgtggcggcgccgccgctcccggcgcccgcgctgcagcgccgcgtccgcg 26371688

                                           
Query: 190      cggtcctctactaccgcgccgacggcg 216
                |||| ||||||||||||| || |||||
Sbjct: 26371687 cggtgctctactaccgcggcgccggcg 26371661
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>dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:P0491E01
          Length = 136150

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 59/63 (93%)
 Strand = Plus / Minus

                                                                          
Query: 275    cccggagatggcgggcaggctccggcgccgcgccgacgggtcgtgggacgtgaagctgaa 334
              |||||||||||| ||| ||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 103942 cccggagatggccggccggctccgccgccgcgccgacgggtcgtgggaggtgaagctgaa 103883

                 
Query: 335    cga 337
              |||
Sbjct: 103882 cga 103880



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 120/147 (81%)
 Strand = Plus / Minus

                                                                          
Query: 70     tccacatcgagtccgtacagacggccttaccgacccgtgtcgtccagcccgacaggacgc 129
              ||||||||||| |||| ||||||||  | ||||| || |||||  ||||||  |||||||
Sbjct: 104159 tccacatcgaggccgtgcagacggcggtgccgacgcgcgtcgtggagcccgggaggacgc 104100

                                                                          
Query: 130    gtctcatcgccgtgacctcgccgccgctaccggagactgtgctgcagcatcgcctccgcg 189
              | ||| |||||||| |  |||||||||| |||| | | | ||||||||  ||| ||||||
Sbjct: 104099 gcctcgtcgccgtggcggcgccgccgctcccggcgcccgcgctgcagcgccgcgtccgcg 104040

                                         
Query: 190    cggtcctctactaccgcgccgacggcg 216
              |||| ||||||||||||| || |||||
Sbjct: 104039 cggtgctctactaccgcggcgccggcg 104013
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>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
          Length = 339972

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 59/63 (93%)
 Strand = Plus / Minus

                                                                         
Query: 275   cccggagatggcgggcaggctccggcgccgcgccgacgggtcgtgggacgtgaagctgaa 334
             |||||||||||| ||| ||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 94845 cccggagatggccggccggctccgccgccgcgccgacgggtcgtgggaggtgaagctgaa 94786

                
Query: 335   cga 337
             |||
Sbjct: 94785 cga 94783



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 120/147 (81%)
 Strand = Plus / Minus

                                                                         
Query: 70    tccacatcgagtccgtacagacggccttaccgacccgtgtcgtccagcccgacaggacgc 129
             ||||||||||| |||| ||||||||  | ||||| || |||||  ||||||  |||||||
Sbjct: 95062 tccacatcgaggccgtgcagacggcggtgccgacgcgcgtcgtggagcccgggaggacgc 95003

                                                                         
Query: 130   gtctcatcgccgtgacctcgccgccgctaccggagactgtgctgcagcatcgcctccgcg 189
             | ||| |||||||| |  |||||||||| |||| | | | ||||||||  ||| ||||||
Sbjct: 95002 gcctcgtcgccgtggcggcgccgccgctcccggcgcccgcgctgcagcgccgcgtccgcg 94943

                                        
Query: 190   cggtcctctactaccgcgccgacggcg 216
             |||| ||||||||||||| || |||||
Sbjct: 94942 cggtgctctactaccgcggcgccggcg 94916
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                            
Query: 275      cccggagatggcgggcaggctccggcgccgcgccgacgggtcgtgggacgtgaagctgaa 334
                |||||||||||||||| ||||| | ||||||   || ||||||||||| |||||||||||
Sbjct: 16066089 cccggagatggcgggccggctctgacgccgcatagatgggtcgtgggaggtgaagctgaa 16066148

                   
Query: 335      cga 337
                |||
Sbjct: 16066149 cga 16066151
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>dbj|AP004375.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0475C12
          Length = 140863

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                          
Query: 275    cccggagatggcgggcaggctccggcgccgcgccgacgggtcgtgggacgtgaagctgaa 334
              |||||||||||||||| ||||| | ||||||   || ||||||||||| |||||||||||
Sbjct: 138128 cccggagatggcgggccggctctgacgccgcatagatgggtcgtgggaggtgaagctgaa 138187

                 
Query: 335    cga 337
              |||
Sbjct: 138188 cga 138190
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>dbj|AP005726.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OSJNBa0028A18
          Length = 151080

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                        
Query: 275  cccggagatggcgggcaggctccggcgccgcgccgacgggtcgtgggacgtgaagctgaa 334
            |||||||||||||||| ||||| | ||||||   || ||||||||||| |||||||||||
Sbjct: 4169 cccggagatggcgggccggctctgacgccgcatagatgggtcgtgggaggtgaagctgaa 4228

               
Query: 335  cga 337
            |||
Sbjct: 4229 cga 4231
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>ref|NM_001060004.1| Oryza sativa (japonica cultivar-group) Os04g0545700 (Os04g0545700)
           mRNA, complete cds
          Length = 1143

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 170 gctgcagcatcgcctccgcgcggtcctctactaccgcg 207
           ||||||||  ||| |||||||||| |||||||||||||
Sbjct: 129 gctgcagcgccgcttccgcgcggtgctctactaccgcg 166
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>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21,
             complete sequence
          Length = 141787

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 170   gctgcagcatcgcctccgcgcggtcctctactaccgcg 207
             ||||||||  ||| |||||||||| |||||||||||||
Sbjct: 47077 gctgcagcgccgcttccgcgcggtgctctactaccgcg 47040
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 170      gctgcagcatcgcctccgcgcggtcctctactaccgcg 207
                ||||||||  ||| |||||||||| |||||||||||||
Sbjct: 27311149 gctgcagcgccgcttccgcgcggtgctctactaccgcg 27311112
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>ref|NM_001045703.1| Xenopus tropicalis novel La domain and RNA recognition motif.
           (a.k.a. RRM, RBD, or RNP domain) containing protein
           (LOC734000), mRNA
 emb|CR761502.2| Xenopus tropicalis finished cDNA, clone TGas080c15
          Length = 2287

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 526 ttttttcacggtcttttctcaa 547
           ||||||||||||||||||||||
Sbjct: 137 ttttttcacggtcttttctcaa 116
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>gb|AE009222.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 248
           of 256 of the complete sequence
          Length = 12589

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 201 taccgcgccgacggcgctccg 221
           |||||||||||||||||||||
Sbjct: 970 taccgcgccgacggcgctccg 950
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 201     taccgcgccgacggcgctccg 221
               |||||||||||||||||||||
Sbjct: 2742995 taccgcgccgacggcgctccg 2742975
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>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome
          Length = 3544738

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 468     ctcctcttcatgcaggcacgt 488
               |||||||||||||||||||||
Sbjct: 2958724 ctcctcttcatgcaggcacgt 2958704
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>ref|NM_001074578.1| Oryza sativa (japonica cultivar-group) Os11g0543700 (Os11g0543700)
           mRNA, complete cds
          Length = 3198

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 301 gccgcgccgacgggtcgtgg 320
           ||||||||||||||||||||
Sbjct: 97  gccgcgccgacgggtcgtgg 78
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>ref|NM_001065416.1| Oryza sativa (japonica cultivar-group) Os07g0144500 (Os07g0144500)
            mRNA, complete cds
          Length = 1281

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 169  tgctgcagcatcgcctccgc 188
            ||||||||||||||||||||
Sbjct: 1094 tgctgcagcatcgcctccgc 1075
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>ref|XM_001211656.1| Aspergillus terreus NIH2624 conserved hypothetical protein
            (ATEG_02478) mRNA, complete cds
          Length = 3108

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 378  atggaggatttcctggcgga 397
            ||||||||||||||||||||
Sbjct: 1897 atggaggatttcctggcgga 1916
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 282     atggcgggcaggctccggcgccgcgccg 309
               ||||||| ||||| ||||||||||||||
Sbjct: 3461019 atggcggccaggccccggcgccgcgccg 3460992
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>gb|AC108223.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019A16,
              complete sequence
          Length = 175425

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 301    gccgcgccgacgggtcgtgg 320
              ||||||||||||||||||||
Sbjct: 148224 gccgcgccgacgggtcgtgg 148243
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 323     cgtgaagctgaacgatgccg 342
               ||||||||||||||||||||
Sbjct: 1081071 cgtgaagctgaacgatgccg 1081090
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>ref|XM_597376.2| PREDICTED: Bos taurus similar to Transcription factor BTEB4 (Basic
           transcription element binding-protein 4) (BTE-binding
           protein 4) (Krueppel-like factor 16) (Dopamine receptor
           regulating factor) (LOC519163), mRNA
          Length = 516

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 gagtcgctgggcgaggtgct 265
           ||||||||||||||||||||
Sbjct: 446 gagtcgctgggcgaggtgct 427
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>gb|AE008934.1| Agrobacterium tumefaciens str. C58 AT plasmid section 9 of 49 of the
            complete sequence
          Length = 11411

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 254  gggcgaggtgctttgcctcttccc 277
            ||||||||||||||||||| ||||
Sbjct: 3848 gggcgaggtgctttgcctcgtccc 3871
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>gb|AE007882.1| Agrobacterium tumefaciens str. C58 plasmid AT, section 10 of 50 of
            the complete sequence
          Length = 10267

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 254  gggcgaggtgctttgcctcttccc 277
            ||||||||||||||||||| ||||
Sbjct: 2287 gggcgaggtgctttgcctcgtccc 2310
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>ref|XM_542195.2| PREDICTED: Canis familiaris similar to Kruppel-like factor 16
           (LOC485077), mRNA
          Length = 324

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 gagtcgctgggcgaggtgct 265
           ||||||||||||||||||||
Sbjct: 254 gagtcgctgggcgaggtgct 235
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>ref|XM_388011.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07835.1)
           partial mRNA
          Length = 924

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 375 accatggaggatttcctggc 394
           ||||||||||||||||||||
Sbjct: 379 accatggaggatttcctggc 398
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>gb|AC117838.1| Caenorhabditis briggsae cosmid CB005E21, complete sequence
          Length = 109299

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 512   ttctgaatttctgctttttt 531
             ||||||||||||||||||||
Sbjct: 82854 ttctgaatttctgctttttt 82873
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 301      gccgcgccgacgggtcgtgg 320
                ||||||||||||||||||||
Sbjct: 19279436 gccgcgccgacgggtcgtgg 19279455
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 169     tgctgcagcatcgcctccgc 188
               ||||||||||||||||||||
Sbjct: 2290939 tgctgcagcatcgcctccgc 2290920
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 145     cctcgccgccgctaccggag 164
               ||||||||||||||||||||
Sbjct: 7706402 cctcgccgccgctaccggag 7706383
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>emb|AL513542.11| Human DNA sequence from clone RP11-129J12 on chromosome 10 Contains a
             novel gene and three CpG islands, complete sequence
          Length = 46619

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   ggaggaaggtatttgggtaa 243
             ||||||||||||||||||||
Sbjct: 16791 ggaggaaggtatttgggtaa 16772
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>emb|AL354872.9| Human DNA sequence from clone RP11-42O15 on chromosome 1 Contains the CTH
              gene for cystathionase (cystathionine gamma-lyase) and a
              cysteine and histidine-rich domain (CHORD)-containing zinc
              binding protein 1 (CHORDC1) pseudogene, complete sequence
          Length = 151777

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 562    ctgaactttggtcattttca 581
              ||||||||||||||||||||
Sbjct: 124938 ctgaactttggtcattttca 124957
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>gb|AC160099.1| Unidentified bacterium clone zdt-45e5, complete sequence
          Length = 35743

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 512   ttctgaatttctgctttttt 531
             ||||||||||||||||||||
Sbjct: 34484 ttctgaatttctgctttttt 34503
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>gb|AC154685.2| Mus musculus BAC clone RP24-321G16 from chromosome 17, complete
             sequence
          Length = 162362

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 315   tcgtgggacgtgaagctgaa 334
             ||||||||||||||||||||
Sbjct: 65558 tcgtgggacgtgaagctgaa 65539
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>dbj|AP004651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0091G06
          Length = 161851

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   cctcgccgccgctaccggag 164
             ||||||||||||||||||||
Sbjct: 18900 cctcgccgccgctaccggag 18881
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>dbj|AK070362.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049B05, full
           insert sequence
          Length = 1070

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 cctcgccgccgctaccggag 164
           ||||||||||||||||||||
Sbjct: 425 cctcgccgccgctaccggag 444
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>dbj|AK070175.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044G18, full
           insert sequence
          Length = 1019

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 cctcgccgccgctaccggag 164
           ||||||||||||||||||||
Sbjct: 425 cctcgccgccgctaccggag 444
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>dbj|AP003824.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1343_B12
          Length = 121362

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   tgctgcagcatcgcctccgc 188
             ||||||||||||||||||||
Sbjct: 64638 tgctgcagcatcgcctccgc 64619
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>gb|AC005940.3|AC005940 Homo sapiens chromosome 17, clone hRPK.167_N_20, complete sequence
          Length = 158414

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 379   tggaggatttcctggcggac 398
             ||||||||||||||||||||
Sbjct: 52741 tggaggatttcctggcggac 52722
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>gb|AC165153.2| Mus musculus BAC clone RP23-359L1 from chromosome 17, complete sequence
          Length = 219548

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 315    tcgtgggacgtgaagctgaa 334
              ||||||||||||||||||||
Sbjct: 201616 tcgtgggacgtgaagctgaa 201597


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 90,844,225
Number of extensions: 4542628
Number of successful extensions: 85019
Number of sequences better than 10.0: 39
Number of HSP's gapped: 85019
Number of HSP's successfully gapped: 43
Length of query: 644
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 622
Effective length of database: 18,508,616,841
Effective search space: 11512359675102
Effective search space used: 11512359675102
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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