ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf93m07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001055740.1| Oryza sativa (japonica cultivar-group) Os03g0186900 (Os03g0186900) mRNA, complete cds Length = 1742 Score = 648 bits (327), Expect = 0.0 Identities = 474/523 (90%) Strand = Plus / Plus Query: 814 ggtacacgccgatgctcaagaacccccaccgctcgtcgctctactacgtgaacgtgacgg 873 |||||||||||||||| | |||||| ||| | ||||| |||||||||||||||||||||| Sbjct: 858 ggtacacgccgatgctgaggaacccgcacaggtcgtctctctactacgtgaacgtgacgg 917 Query: 874 ggctgagcgtggggcggtccccggtgaaggtgccggcgggatcgttcgcgttcgacccca 933 |||| |||||||||| | ||||||||| || ||||||||||||||||||||| || Sbjct: 918 ggctcagcgtggggcacgcgtgggtgaaggtccccgcgggatcgttcgcgttcgacgccg 977 Query: 934 gcacgggcgccggcacggtggtcgactccggcacggtcatcacacggtggacggcgcccg 993 ||| ||||||||||||||||| |||||||||||||| ||||| |||||||||||||| | Sbjct: 978 ccaccggcgccggcacggtggtggactccggcacggtgatcacgcggtggacggcgccgg 1037 Query: 994 tctacgcggcgctgcgggaggagttcaggcgccacgtcgcggcgccgagcgggtacacgt 1053 | |||||||||||||||||||||||| |||| || || |||||||||||||||||||||| Sbjct: 1038 tgtacgcggcgctgcgggaggagttccggcggcaggtagcggcgccgagcgggtacacgt 1097 Query: 1054 cgctgggcgcgttcgacacgtgcttcaacacggacgaggtggcggccgggggcgcgccgg 1113 ||||||||||||||||||||||||||||||| ||||||||||| ||||| || || || | Sbjct: 1098 cgctgggcgcgttcgacacgtgcttcaacaccgacgaggtggccgccggcggagcccccg 1157 Query: 1114 ccgtgacgatccacatggacggcggcgtcgacctggcgctgcccatggagaacacgctga 1173 | |||||| | ||||||||||||||||| |||||||||||||| |||||||||||||| | Sbjct: 1158 cggtgacggtgcacatggacggcggcgtggacctggcgctgccgatggagaacacgctca 1217 Query: 1174 tccacagcagcgcgacgccgctggcgtgcctggccatggccgaggcgccgcagaacgtca 1233 ||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 1218 tccacagcagcgccacgccgctggcctgcctcgccatggccgaggcgccgcagaacgtca 1277 Query: 1234 actccgtcgtcaacgtcgtcgccaacctgcagcagcagaacctccggatcgtcttcgacg 1293 ||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 1278 actccgtcgtcaacgtcatcgccaacctgcagcagcagaacatccgggtcgtcttcgacg 1337 Query: 1294 tcgccaactcgcgcgtcggcttcgcccgggagtcctgcaacta 1336 |||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 1338 tcgccaactcccgcgtcggcttcgccaaggagtcctgcaacta 1380 Score = 297 bits (150), Expect = 6e-77 Identities = 293/340 (86%), Gaps = 3/340 (0%) Strand = Plus / Plus Query: 67 tcctcctcctcctcgccgccacagtcgccgcggccgccgac---ctctccgtctaccaca 123 ||||||||||||| |||||||| |||||||| ||||||| | |||||||| ||||||| Sbjct: 93 tcctcctcctcctggccgccaccgtcgccgccgccgccgccgagctctccgtgtaccaca 152 Query: 124 acgtccaccctccgtccgcctccccgctcgagtccatcatctcgctcgcccgcgacgacg 183 |||| ||||| |||| | ||||||||||||||||||||| |||||||||||||||||| Sbjct: 153 acgtgcacccctcgtcgccgtccccgctcgagtccatcatcgcgctcgcccgcgacgacg 212 Query: 184 acgcgcgcctcctcttcctctcctccaaggccgcctccaccggcgtcacctccgcgccag 243 |||| |||||||||||||||||||||||||| ||| || |||||||| ||||||| || | Sbjct: 213 acgcccgcctcctcttcctctcctccaaggcagccaccgccggcgtctcctccgcccccg 272 Query: 244 tggcctccgggcagaccccgccctcctacgtggtgcgcgccgggctcggctcgccggccc 303 | |||||||| ||| |||| || |||||||| || || ||||| |||||||||||| | | Sbjct: 273 tcgcctccggccaggcccccccgtcctacgtcgtccgggccggcctcggctcgccgtcgc 332 Query: 304 agcccgtcctcctggccctcgacaccagcgccgacgccacctgggcgcactgctccccgt 363 ||| | || ||||| |||||||||||||||||||| || |||||||||||||| |||| Sbjct: 333 agcagctgctgctggcgctcgacaccagcgccgacgcgacgtgggcgcactgctcgccgt 392 Query: 364 gcggcacctgccccaccaacagcctcttcgtcccggccaa 403 ||||||| ||||| | || ||||||||||| ||||||||| Sbjct: 393 gcggcacgtgcccgagcagcagcctcttcgccccggccaa 432 Score = 289 bits (146), Expect = 1e-74 Identities = 263/302 (87%) Strand = Plus / Plus Query: 496 cggcgccgctgccgtcgtgcgccttctcgaagccgttcgccgacgcctccttccaggcgg 555 ||||| |||||||| ||||||||||||| ||||||||||||||||| || |||||||||| Sbjct: 537 cggcgacgctgccgacgtgcgccttctccaagccgttcgccgacgcgtcgttccaggcgg 596 Query: 556 agctggccagcgactggctgcatctgggcaaggactccatccccaactacgcgttcgggt 615 ||| ||||||||| |||| |||||||||||| ||||||| |||||| ||||||||| Sbjct: 597 cgctcgccagcgacacgctgaggctgggcaaggacgccatcccgaactacacgttcgggt 656 Query: 616 gcgtgggctcggtgagcgggccgacgtccaacctgccgaagcaggggctgctgggcctgg 675 ||||| ||||||||| ||||||||| | ||| |||| | ||| |||||||| ||||| | Sbjct: 657 gcgtgagctcggtgacggggccgacgacgaacatgccaaggcaagggctgctcggcctcg 716 Query: 676 gccggggccccatggccctgctgtcccaggtcggcaacatgtacaacggcgtcttctcct 735 | || ||||||||||| ||||| ||||||| ||| | | ||||||| ||||||||||||| Sbjct: 717 ggcgtggccccatggcgctgctctcccaggccgggagcttgtacaatggcgtcttctcct 776 Query: 736 actgcctcccgagctacaagtcgtactacttctccggctcgctccggctgggcaccgccg 795 |||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| || Sbjct: 777 actgcctcccgagctacaggtcatactacttctccggctcgctccggctgggcgccggcg 836 Query: 796 gc 797 || Sbjct: 837 gc 838
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 648 bits (327), Expect = 0.0 Identities = 474/523 (90%) Strand = Plus / Plus Query: 814 ggtacacgccgatgctcaagaacccccaccgctcgtcgctctactacgtgaacgtgacgg 873 |||||||||||||||| | |||||| ||| | ||||| |||||||||||||||||||||| Sbjct: 4523995 ggtacacgccgatgctgaggaacccgcacaggtcgtctctctactacgtgaacgtgacgg 4524054 Query: 874 ggctgagcgtggggcggtccccggtgaaggtgccggcgggatcgttcgcgttcgacccca 933 |||| |||||||||| | ||||||||| || ||||||||||||||||||||| || Sbjct: 4524055 ggctcagcgtggggcacgcgtgggtgaaggtccccgcgggatcgttcgcgttcgacgccg 4524114 Query: 934 gcacgggcgccggcacggtggtcgactccggcacggtcatcacacggtggacggcgcccg 993 ||| ||||||||||||||||| |||||||||||||| ||||| |||||||||||||| | Sbjct: 4524115 ccaccggcgccggcacggtggtggactccggcacggtgatcacgcggtggacggcgccgg 4524174 Query: 994 tctacgcggcgctgcgggaggagttcaggcgccacgtcgcggcgccgagcgggtacacgt 1053 | |||||||||||||||||||||||| |||| || || |||||||||||||||||||||| Sbjct: 4524175 tgtacgcggcgctgcgggaggagttccggcggcaggtagcggcgccgagcgggtacacgt 4524234 Query: 1054 cgctgggcgcgttcgacacgtgcttcaacacggacgaggtggcggccgggggcgcgccgg 1113 ||||||||||||||||||||||||||||||| ||||||||||| ||||| || || || | Sbjct: 4524235 cgctgggcgcgttcgacacgtgcttcaacaccgacgaggtggccgccggcggagcccccg 4524294 Query: 1114 ccgtgacgatccacatggacggcggcgtcgacctggcgctgcccatggagaacacgctga 1173 | |||||| | ||||||||||||||||| |||||||||||||| |||||||||||||| | Sbjct: 4524295 cggtgacggtgcacatggacggcggcgtggacctggcgctgccgatggagaacacgctca 4524354 Query: 1174 tccacagcagcgcgacgccgctggcgtgcctggccatggccgaggcgccgcagaacgtca 1233 ||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 4524355 tccacagcagcgccacgccgctggcctgcctcgccatggccgaggcgccgcagaacgtca 4524414 Query: 1234 actccgtcgtcaacgtcgtcgccaacctgcagcagcagaacctccggatcgtcttcgacg 1293 ||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 4524415 actccgtcgtcaacgtcatcgccaacctgcagcagcagaacatccgggtcgtcttcgacg 4524474 Query: 1294 tcgccaactcgcgcgtcggcttcgcccgggagtcctgcaacta 1336 |||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 4524475 tcgccaactcccgcgtcggcttcgccaaggagtcctgcaacta 4524517 Score = 297 bits (150), Expect = 6e-77 Identities = 293/340 (86%), Gaps = 3/340 (0%) Strand = Plus / Plus Query: 67 tcctcctcctcctcgccgccacagtcgccgcggccgccgac---ctctccgtctaccaca 123 ||||||||||||| |||||||| |||||||| ||||||| | |||||||| ||||||| Sbjct: 4523230 tcctcctcctcctggccgccaccgtcgccgccgccgccgccgagctctccgtgtaccaca 4523289 Query: 124 acgtccaccctccgtccgcctccccgctcgagtccatcatctcgctcgcccgcgacgacg 183 |||| ||||| |||| | ||||||||||||||||||||| |||||||||||||||||| Sbjct: 4523290 acgtgcacccctcgtcgccgtccccgctcgagtccatcatcgcgctcgcccgcgacgacg 4523349 Query: 184 acgcgcgcctcctcttcctctcctccaaggccgcctccaccggcgtcacctccgcgccag 243 |||| |||||||||||||||||||||||||| ||| || |||||||| ||||||| || | Sbjct: 4523350 acgcccgcctcctcttcctctcctccaaggcagccaccgccggcgtctcctccgcccccg 4523409 Query: 244 tggcctccgggcagaccccgccctcctacgtggtgcgcgccgggctcggctcgccggccc 303 | |||||||| ||| |||| || |||||||| || || ||||| |||||||||||| | | Sbjct: 4523410 tcgcctccggccaggcccccccgtcctacgtcgtccgggccggcctcggctcgccgtcgc 4523469 Query: 304 agcccgtcctcctggccctcgacaccagcgccgacgccacctgggcgcactgctccccgt 363 ||| | || ||||| |||||||||||||||||||| || |||||||||||||| |||| Sbjct: 4523470 agcagctgctgctggcgctcgacaccagcgccgacgcgacgtgggcgcactgctcgccgt 4523529 Query: 364 gcggcacctgccccaccaacagcctcttcgtcccggccaa 403 ||||||| ||||| | || ||||||||||| ||||||||| Sbjct: 4523530 gcggcacgtgcccgagcagcagcctcttcgccccggccaa 4523569 Score = 289 bits (146), Expect = 1e-74 Identities = 263/302 (87%) Strand = Plus / Plus Query: 496 cggcgccgctgccgtcgtgcgccttctcgaagccgttcgccgacgcctccttccaggcgg 555 ||||| |||||||| ||||||||||||| ||||||||||||||||| || |||||||||| Sbjct: 4523674 cggcgacgctgccgacgtgcgccttctccaagccgttcgccgacgcgtcgttccaggcgg 4523733 Query: 556 agctggccagcgactggctgcatctgggcaaggactccatccccaactacgcgttcgggt 615 ||| ||||||||| |||| |||||||||||| ||||||| |||||| ||||||||| Sbjct: 4523734 cgctcgccagcgacacgctgaggctgggcaaggacgccatcccgaactacacgttcgggt 4523793 Query: 616 gcgtgggctcggtgagcgggccgacgtccaacctgccgaagcaggggctgctgggcctgg 675 ||||| ||||||||| ||||||||| | ||| |||| | ||| |||||||| ||||| | Sbjct: 4523794 gcgtgagctcggtgacggggccgacgacgaacatgccaaggcaagggctgctcggcctcg 4523853 Query: 676 gccggggccccatggccctgctgtcccaggtcggcaacatgtacaacggcgtcttctcct 735 | || ||||||||||| ||||| ||||||| ||| | | ||||||| ||||||||||||| Sbjct: 4523854 ggcgtggccccatggcgctgctctcccaggccgggagcttgtacaatggcgtcttctcct 4523913 Query: 736 actgcctcccgagctacaagtcgtactacttctccggctcgctccggctgggcaccgccg 795 |||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| || Sbjct: 4523914 actgcctcccgagctacaggtcatactacttctccggctcgctccggctgggcgccggcg 4523973 Query: 796 gc 797 || Sbjct: 4523974 gc 4523975 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 ctcctcctcctcgccgccacag 90 |||||||||||||||||||||| Sbjct: 21502944 ctcctcctcctcgccgccacag 21502965 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 cctcctcctcctcgccgccac 88 ||||||||||||||||||||| Sbjct: 4784863 cctcctcctcctcgccgccac 4784843 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 10076743 gtacgtacgtacgtacgtatg 10076763 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 tcctcctcctcctcgccgcca 87 ||||||||||||||||||||| Sbjct: 34686833 tcctcctcctcctcgccgcca 34686853 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 35544055 gtacgtacgtacgtacgtatg 35544075
>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0042J17, complete sequence Length = 171442 Score = 648 bits (327), Expect = 0.0 Identities = 474/523 (90%) Strand = Plus / Plus Query: 814 ggtacacgccgatgctcaagaacccccaccgctcgtcgctctactacgtgaacgtgacgg 873 |||||||||||||||| | |||||| ||| | ||||| |||||||||||||||||||||| Sbjct: 129172 ggtacacgccgatgctgaggaacccgcacaggtcgtctctctactacgtgaacgtgacgg 129231 Query: 874 ggctgagcgtggggcggtccccggtgaaggtgccggcgggatcgttcgcgttcgacccca 933 |||| |||||||||| | ||||||||| || ||||||||||||||||||||| || Sbjct: 129232 ggctcagcgtggggcacgcgtgggtgaaggtccccgcgggatcgttcgcgttcgacgccg 129291 Query: 934 gcacgggcgccggcacggtggtcgactccggcacggtcatcacacggtggacggcgcccg 993 ||| ||||||||||||||||| |||||||||||||| ||||| |||||||||||||| | Sbjct: 129292 ccaccggcgccggcacggtggtggactccggcacggtgatcacgcggtggacggcgccgg 129351 Query: 994 tctacgcggcgctgcgggaggagttcaggcgccacgtcgcggcgccgagcgggtacacgt 1053 | |||||||||||||||||||||||| |||| || || |||||||||||||||||||||| Sbjct: 129352 tgtacgcggcgctgcgggaggagttccggcggcaggtagcggcgccgagcgggtacacgt 129411 Query: 1054 cgctgggcgcgttcgacacgtgcttcaacacggacgaggtggcggccgggggcgcgccgg 1113 ||||||||||||||||||||||||||||||| ||||||||||| ||||| || || || | Sbjct: 129412 cgctgggcgcgttcgacacgtgcttcaacaccgacgaggtggccgccggcggagcccccg 129471 Query: 1114 ccgtgacgatccacatggacggcggcgtcgacctggcgctgcccatggagaacacgctga 1173 | |||||| | ||||||||||||||||| |||||||||||||| |||||||||||||| | Sbjct: 129472 cggtgacggtgcacatggacggcggcgtggacctggcgctgccgatggagaacacgctca 129531 Query: 1174 tccacagcagcgcgacgccgctggcgtgcctggccatggccgaggcgccgcagaacgtca 1233 ||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 129532 tccacagcagcgccacgccgctggcctgcctcgccatggccgaggcgccgcagaacgtca 129591 Query: 1234 actccgtcgtcaacgtcgtcgccaacctgcagcagcagaacctccggatcgtcttcgacg 1293 ||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 129592 actccgtcgtcaacgtcatcgccaacctgcagcagcagaacatccgggtcgtcttcgacg 129651 Query: 1294 tcgccaactcgcgcgtcggcttcgcccgggagtcctgcaacta 1336 |||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 129652 tcgccaactcccgcgtcggcttcgccaaggagtcctgcaacta 129694 Score = 297 bits (150), Expect = 6e-77 Identities = 293/340 (86%), Gaps = 3/340 (0%) Strand = Plus / Plus Query: 67 tcctcctcctcctcgccgccacagtcgccgcggccgccgac---ctctccgtctaccaca 123 ||||||||||||| |||||||| |||||||| ||||||| | |||||||| ||||||| Sbjct: 128407 tcctcctcctcctggccgccaccgtcgccgccgccgccgccgagctctccgtgtaccaca 128466 Query: 124 acgtccaccctccgtccgcctccccgctcgagtccatcatctcgctcgcccgcgacgacg 183 |||| ||||| |||| | ||||||||||||||||||||| |||||||||||||||||| Sbjct: 128467 acgtgcacccctcgtcgccgtccccgctcgagtccatcatcgcgctcgcccgcgacgacg 128526 Query: 184 acgcgcgcctcctcttcctctcctccaaggccgcctccaccggcgtcacctccgcgccag 243 |||| |||||||||||||||||||||||||| ||| || |||||||| ||||||| || | Sbjct: 128527 acgcccgcctcctcttcctctcctccaaggcagccaccgccggcgtctcctccgcccccg 128586 Query: 244 tggcctccgggcagaccccgccctcctacgtggtgcgcgccgggctcggctcgccggccc 303 | |||||||| ||| |||| || |||||||| || || ||||| |||||||||||| | | Sbjct: 128587 tcgcctccggccaggcccccccgtcctacgtcgtccgggccggcctcggctcgccgtcgc 128646 Query: 304 agcccgtcctcctggccctcgacaccagcgccgacgccacctgggcgcactgctccccgt 363 ||| | || ||||| |||||||||||||||||||| || |||||||||||||| |||| Sbjct: 128647 agcagctgctgctggcgctcgacaccagcgccgacgcgacgtgggcgcactgctcgccgt 128706 Query: 364 gcggcacctgccccaccaacagcctcttcgtcccggccaa 403 ||||||| ||||| | || ||||||||||| ||||||||| Sbjct: 128707 gcggcacgtgcccgagcagcagcctcttcgccccggccaa 128746 Score = 289 bits (146), Expect = 1e-74 Identities = 263/302 (87%) Strand = Plus / Plus Query: 496 cggcgccgctgccgtcgtgcgccttctcgaagccgttcgccgacgcctccttccaggcgg 555 ||||| |||||||| ||||||||||||| ||||||||||||||||| || |||||||||| Sbjct: 128851 cggcgacgctgccgacgtgcgccttctccaagccgttcgccgacgcgtcgttccaggcgg 128910 Query: 556 agctggccagcgactggctgcatctgggcaaggactccatccccaactacgcgttcgggt 615 ||| ||||||||| |||| |||||||||||| ||||||| |||||| ||||||||| Sbjct: 128911 cgctcgccagcgacacgctgaggctgggcaaggacgccatcccgaactacacgttcgggt 128970 Query: 616 gcgtgggctcggtgagcgggccgacgtccaacctgccgaagcaggggctgctgggcctgg 675 ||||| ||||||||| ||||||||| | ||| |||| | ||| |||||||| ||||| | Sbjct: 128971 gcgtgagctcggtgacggggccgacgacgaacatgccaaggcaagggctgctcggcctcg 129030 Query: 676 gccggggccccatggccctgctgtcccaggtcggcaacatgtacaacggcgtcttctcct 735 | || ||||||||||| ||||| ||||||| ||| | | ||||||| ||||||||||||| Sbjct: 129031 ggcgtggccccatggcgctgctctcccaggccgggagcttgtacaatggcgtcttctcct 129090 Query: 736 actgcctcccgagctacaagtcgtactacttctccggctcgctccggctgggcaccgccg 795 |||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| || Sbjct: 129091 actgcctcccgagctacaggtcatactacttctccggctcgctccggctgggcgccggcg 129150 Query: 796 gc 797 || Sbjct: 129151 gc 129152
>dbj|AB122090.1| Oryza sativa (japonica cultivar-group) Radc1 gene for Radc1, complete cds Length = 3000 Score = 648 bits (327), Expect = 0.0 Identities = 474/523 (90%) Strand = Plus / Plus Query: 814 ggtacacgccgatgctcaagaacccccaccgctcgtcgctctactacgtgaacgtgacgg 873 |||||||||||||||| | |||||| ||| | ||||| |||||||||||||||||||||| Sbjct: 2052 ggtacacgccgatgctgaggaacccgcacaggtcgtctctctactacgtgaacgtgacgg 2111 Query: 874 ggctgagcgtggggcggtccccggtgaaggtgccggcgggatcgttcgcgttcgacccca 933 |||| |||||||||| | ||||||||| || ||||||||||||||||||||| || Sbjct: 2112 ggctcagcgtggggcacgcgtgggtgaaggtccccgcgggatcgttcgcgttcgacgccg 2171 Query: 934 gcacgggcgccggcacggtggtcgactccggcacggtcatcacacggtggacggcgcccg 993 ||| ||||||||||||||||| |||||||||||||| ||||| |||||||||||||| | Sbjct: 2172 ccaccggcgccggcacggtggtggactccggcacggtgatcacgcggtggacggcgccgg 2231 Query: 994 tctacgcggcgctgcgggaggagttcaggcgccacgtcgcggcgccgagcgggtacacgt 1053 | |||||||||||||||||||||||| |||| || || |||||||||||||||||||||| Sbjct: 2232 tgtacgcggcgctgcgggaggagttccggcggcaggtagcggcgccgagcgggtacacgt 2291 Query: 1054 cgctgggcgcgttcgacacgtgcttcaacacggacgaggtggcggccgggggcgcgccgg 1113 ||||||||||||||||||||||||||||||| ||||||||||| ||||| || || || | Sbjct: 2292 cgctgggcgcgttcgacacgtgcttcaacaccgacgaggtggccgccggcggagcccccg 2351 Query: 1114 ccgtgacgatccacatggacggcggcgtcgacctggcgctgcccatggagaacacgctga 1173 | |||||| | ||||||||||||||||| |||||||||||||| |||||||||||||| | Sbjct: 2352 cggtgacggtgcacatggacggcggcgtggacctggcgctgccgatggagaacacgctca 2411 Query: 1174 tccacagcagcgcgacgccgctggcgtgcctggccatggccgaggcgccgcagaacgtca 1233 ||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 2412 tccacagcagcgccacgccgctggcctgcctcgccatggccgaggcgccgcagaacgtca 2471 Query: 1234 actccgtcgtcaacgtcgtcgccaacctgcagcagcagaacctccggatcgtcttcgacg 1293 ||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 2472 actccgtcgtcaacgtcatcgccaacctgcagcagcagaacatccgggtcgtcttcgacg 2531 Query: 1294 tcgccaactcgcgcgtcggcttcgcccgggagtcctgcaacta 1336 |||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 2532 tcgccaactcccgcgtcggcttcgccaaggagtcctgcaacta 2574 Score = 297 bits (150), Expect = 6e-77 Identities = 293/340 (86%), Gaps = 3/340 (0%) Strand = Plus / Plus Query: 67 tcctcctcctcctcgccgccacagtcgccgcggccgccgac---ctctccgtctaccaca 123 ||||||||||||| |||||||| |||||||| ||||||| | |||||||| ||||||| Sbjct: 1287 tcctcctcctcctggccgccaccgtcgccgccgccgccgccgagctctccgtgtaccaca 1346 Query: 124 acgtccaccctccgtccgcctccccgctcgagtccatcatctcgctcgcccgcgacgacg 183 |||| ||||| |||| | ||||||||||||||||||||| |||||||||||||||||| Sbjct: 1347 acgtgcacccctcgtcgccgtccccgctcgagtccatcatcgcgctcgcccgcgacgacg 1406 Query: 184 acgcgcgcctcctcttcctctcctccaaggccgcctccaccggcgtcacctccgcgccag 243 |||| |||||||||||||||||||||||||| ||| || |||||||| ||||||| || | Sbjct: 1407 acgcccgcctcctcttcctctcctccaaggcagccaccgccggcgtctcctccgcccccg 1466 Query: 244 tggcctccgggcagaccccgccctcctacgtggtgcgcgccgggctcggctcgccggccc 303 | |||||||| ||| |||| || |||||||| || || ||||| |||||||||||| | | Sbjct: 1467 tcgcctccggccaggcccccccgtcctacgtcgtccgggccggcctcggctcgccgtcgc 1526 Query: 304 agcccgtcctcctggccctcgacaccagcgccgacgccacctgggcgcactgctccccgt 363 ||| | || ||||| |||||||||||||||||||| || |||||||||||||| |||| Sbjct: 1527 agcagctgctgctggcgctcgacaccagcgccgacgcgacgtgggcgcactgctcgccgt 1586 Query: 364 gcggcacctgccccaccaacagcctcttcgtcccggccaa 403 ||||||| ||||| | || ||||||||||| ||||||||| Sbjct: 1587 gcggcacgtgcccgagcagcagcctcttcgccccggccaa 1626 Score = 289 bits (146), Expect = 1e-74 Identities = 263/302 (87%) Strand = Plus / Plus Query: 496 cggcgccgctgccgtcgtgcgccttctcgaagccgttcgccgacgcctccttccaggcgg 555 ||||| |||||||| ||||||||||||| ||||||||||||||||| || |||||||||| Sbjct: 1731 cggcgacgctgccgacgtgcgccttctccaagccgttcgccgacgcgtcgttccaggcgg 1790 Query: 556 agctggccagcgactggctgcatctgggcaaggactccatccccaactacgcgttcgggt 615 ||| ||||||||| |||| |||||||||||| ||||||| |||||| ||||||||| Sbjct: 1791 cgctcgccagcgacacgctgaggctgggcaaggacgccatcccgaactacacgttcgggt 1850 Query: 616 gcgtgggctcggtgagcgggccgacgtccaacctgccgaagcaggggctgctgggcctgg 675 ||||| ||||||||| ||||||||| | ||| |||| | ||| |||||||| ||||| | Sbjct: 1851 gcgtgagctcggtgacggggccgacgacgaacatgccaaggcaagggctgctcggcctcg 1910 Query: 676 gccggggccccatggccctgctgtcccaggtcggcaacatgtacaacggcgtcttctcct 735 | || ||||||||||| ||||| ||||||| ||| | | ||||||| ||||||||||||| Sbjct: 1911 ggcgtggccccatggcgctgctctcccaggccgggagcttgtacaatggcgtcttctcct 1970 Query: 736 actgcctcccgagctacaagtcgtactacttctccggctcgctccggctgggcaccgccg 795 |||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| || Sbjct: 1971 actgcctcccgagctacaggtcatactacttctccggctcgctccggctgggcgccggcg 2030 Query: 796 gc 797 || Sbjct: 2031 gc 2032
>dbj|AK120050.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A21, full insert sequence Length = 1693 Score = 648 bits (327), Expect = 0.0 Identities = 474/523 (90%) Strand = Plus / Plus Query: 814 ggtacacgccgatgctcaagaacccccaccgctcgtcgctctactacgtgaacgtgacgg 873 |||||||||||||||| | |||||| ||| | ||||| |||||||||||||||||||||| Sbjct: 847 ggtacacgccgatgctgaggaacccgcacaggtcgtctctctactacgtgaacgtgacgg 906 Query: 874 ggctgagcgtggggcggtccccggtgaaggtgccggcgggatcgttcgcgttcgacccca 933 |||| |||||||||| | ||||||||| || ||||||||||||||||||||| || Sbjct: 907 ggctcagcgtggggcacgcgtgggtgaaggtccccgcgggatcgttcgcgttcgacgccg 966 Query: 934 gcacgggcgccggcacggtggtcgactccggcacggtcatcacacggtggacggcgcccg 993 ||| ||||||||||||||||| |||||||||||||| ||||| |||||||||||||| | Sbjct: 967 ccaccggcgccggcacggtggtggactccggcacggtgatcacgcggtggacggcgccgg 1026 Query: 994 tctacgcggcgctgcgggaggagttcaggcgccacgtcgcggcgccgagcgggtacacgt 1053 | |||||||||||||||||||||||| |||| || || |||||||||||||||||||||| Sbjct: 1027 tgtacgcggcgctgcgggaggagttccggcggcaggtagcggcgccgagcgggtacacgt 1086 Query: 1054 cgctgggcgcgttcgacacgtgcttcaacacggacgaggtggcggccgggggcgcgccgg 1113 ||||||||||||||||||||||||||||||| ||||||||||| ||||| || || || | Sbjct: 1087 cgctgggcgcgttcgacacgtgcttcaacaccgacgaggtggccgccggcggagcccccg 1146 Query: 1114 ccgtgacgatccacatggacggcggcgtcgacctggcgctgcccatggagaacacgctga 1173 | |||||| | ||||||||||||||||| |||||||||||||| |||||||||||||| | Sbjct: 1147 cggtgacggtgcacatggacggcggcgtggacctggcgctgccgatggagaacacgctca 1206 Query: 1174 tccacagcagcgcgacgccgctggcgtgcctggccatggccgaggcgccgcagaacgtca 1233 ||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 1207 tccacagcagcgccacgccgctggcctgcctcgccatggccgaggcgccgcagaacgtca 1266 Query: 1234 actccgtcgtcaacgtcgtcgccaacctgcagcagcagaacctccggatcgtcttcgacg 1293 ||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 1267 actccgtcgtcaacgtcatcgccaacctgcagcagcagaacatccgggtcgtcttcgacg 1326 Query: 1294 tcgccaactcgcgcgtcggcttcgcccgggagtcctgcaacta 1336 |||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 1327 tcgccaactcccgcgtcggcttcgccaaggagtcctgcaacta 1369 Score = 297 bits (150), Expect = 6e-77 Identities = 293/340 (86%), Gaps = 3/340 (0%) Strand = Plus / Plus Query: 67 tcctcctcctcctcgccgccacagtcgccgcggccgccgac---ctctccgtctaccaca 123 ||||||||||||| |||||||| |||||||| ||||||| | |||||||| ||||||| Sbjct: 82 tcctcctcctcctggccgccaccgtcgccgccgccgccgccgagctctccgtgtaccaca 141 Query: 124 acgtccaccctccgtccgcctccccgctcgagtccatcatctcgctcgcccgcgacgacg 183 |||| ||||| |||| | ||||||||||||||||||||| |||||||||||||||||| Sbjct: 142 acgtgcacccctcgtcgccgtccccgctcgagtccatcatcgcgctcgcccgcgacgacg 201 Query: 184 acgcgcgcctcctcttcctctcctccaaggccgcctccaccggcgtcacctccgcgccag 243 |||| |||||||||||||||||||||||||| ||| || |||||||| ||||||| || | Sbjct: 202 acgcccgcctcctcttcctctcctccaaggcagccaccgccggcgtctcctccgcccccg 261 Query: 244 tggcctccgggcagaccccgccctcctacgtggtgcgcgccgggctcggctcgccggccc 303 | |||||||| ||| |||| || |||||||| || || ||||| |||||||||||| | | Sbjct: 262 tcgcctccggccaggcccccccgtcctacgtcgtccgggccggcctcggctcgccgtcgc 321 Query: 304 agcccgtcctcctggccctcgacaccagcgccgacgccacctgggcgcactgctccccgt 363 ||| | || ||||| |||||||||||||||||||| || |||||||||||||| |||| Sbjct: 322 agcagctgctgctggcgctcgacaccagcgccgacgcgacgtgggcgcactgctcgccgt 381 Query: 364 gcggcacctgccccaccaacagcctcttcgtcccggccaa 403 ||||||| ||||| | || ||||||||||| ||||||||| Sbjct: 382 gcggcacgtgcccgagcagcagcctcttcgccccggccaa 421 Score = 289 bits (146), Expect = 1e-74 Identities = 263/302 (87%) Strand = Plus / Plus Query: 496 cggcgccgctgccgtcgtgcgccttctcgaagccgttcgccgacgcctccttccaggcgg 555 ||||| |||||||| ||||||||||||| ||||||||||||||||| || |||||||||| Sbjct: 526 cggcgacgctgccgacgtgcgccttctccaagccgttcgccgacgcgtcgttccaggcgg 585 Query: 556 agctggccagcgactggctgcatctgggcaaggactccatccccaactacgcgttcgggt 615 ||| ||||||||| |||| |||||||||||| ||||||| |||||| ||||||||| Sbjct: 586 cgctcgccagcgacacgctgaggctgggcaaggacgccatcccgaactacacgttcgggt 645 Query: 616 gcgtgggctcggtgagcgggccgacgtccaacctgccgaagcaggggctgctgggcctgg 675 ||||| ||||||||| ||||||||| | ||| |||| | ||| |||||||| ||||| | Sbjct: 646 gcgtgagctcggtgacggggccgacgacgaacatgccaaggcaagggctgctcggcctcg 705 Query: 676 gccggggccccatggccctgctgtcccaggtcggcaacatgtacaacggcgtcttctcct 735 | || ||||||||||| ||||| ||||||| ||| | | ||||||| ||||||||||||| Sbjct: 706 ggcgtggccccatggcgctgctctcccaggccgggagcttgtacaatggcgtcttctcct 765 Query: 736 actgcctcccgagctacaagtcgtactacttctccggctcgctccggctgggcaccgccg 795 |||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| || Sbjct: 766 actgcctcccgagctacaggtcatactacttctccggctcgctccggctgggcgccggcg 825 Query: 796 gc 797 || Sbjct: 826 gc 827
>dbj|AK062232.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-D08, full insert sequence Length = 1742 Score = 648 bits (327), Expect = 0.0 Identities = 474/523 (90%) Strand = Plus / Plus Query: 814 ggtacacgccgatgctcaagaacccccaccgctcgtcgctctactacgtgaacgtgacgg 873 |||||||||||||||| | |||||| ||| | ||||| |||||||||||||||||||||| Sbjct: 858 ggtacacgccgatgctgaggaacccgcacaggtcgtctctctactacgtgaacgtgacgg 917 Query: 874 ggctgagcgtggggcggtccccggtgaaggtgccggcgggatcgttcgcgttcgacccca 933 |||| |||||||||| | ||||||||| || ||||||||||||||||||||| || Sbjct: 918 ggctcagcgtggggcacgcgtgggtgaaggtccccgcgggatcgttcgcgttcgacgccg 977 Query: 934 gcacgggcgccggcacggtggtcgactccggcacggtcatcacacggtggacggcgcccg 993 ||| ||||||||||||||||| |||||||||||||| ||||| |||||||||||||| | Sbjct: 978 ccaccggcgccggcacggtggtggactccggcacggtgatcacgcggtggacggcgccgg 1037 Query: 994 tctacgcggcgctgcgggaggagttcaggcgccacgtcgcggcgccgagcgggtacacgt 1053 | |||||||||||||||||||||||| |||| || || |||||||||||||||||||||| Sbjct: 1038 tgtacgcggcgctgcgggaggagttccggcggcaggtagcggcgccgagcgggtacacgt 1097 Query: 1054 cgctgggcgcgttcgacacgtgcttcaacacggacgaggtggcggccgggggcgcgccgg 1113 ||||||||||||||||||||||||||||||| ||||||||||| ||||| || || || | Sbjct: 1098 cgctgggcgcgttcgacacgtgcttcaacaccgacgaggtggccgccggcggagcccccg 1157 Query: 1114 ccgtgacgatccacatggacggcggcgtcgacctggcgctgcccatggagaacacgctga 1173 | |||||| | ||||||||||||||||| |||||||||||||| |||||||||||||| | Sbjct: 1158 cggtgacggtgcacatggacggcggcgtggacctggcgctgccgatggagaacacgctca 1217 Query: 1174 tccacagcagcgcgacgccgctggcgtgcctggccatggccgaggcgccgcagaacgtca 1233 ||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 1218 tccacagcagcgccacgccgctggcctgcctcgccatggccgaggcgccgcagaacgtca 1277 Query: 1234 actccgtcgtcaacgtcgtcgccaacctgcagcagcagaacctccggatcgtcttcgacg 1293 ||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 1278 actccgtcgtcaacgtcatcgccaacctgcagcagcagaacatccgggtcgtcttcgacg 1337 Query: 1294 tcgccaactcgcgcgtcggcttcgcccgggagtcctgcaacta 1336 |||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 1338 tcgccaactcccgcgtcggcttcgccaaggagtcctgcaacta 1380 Score = 297 bits (150), Expect = 6e-77 Identities = 293/340 (86%), Gaps = 3/340 (0%) Strand = Plus / Plus Query: 67 tcctcctcctcctcgccgccacagtcgccgcggccgccgac---ctctccgtctaccaca 123 ||||||||||||| |||||||| |||||||| ||||||| | |||||||| ||||||| Sbjct: 93 tcctcctcctcctggccgccaccgtcgccgccgccgccgccgagctctccgtgtaccaca 152 Query: 124 acgtccaccctccgtccgcctccccgctcgagtccatcatctcgctcgcccgcgacgacg 183 |||| ||||| |||| | ||||||||||||||||||||| |||||||||||||||||| Sbjct: 153 acgtgcacccctcgtcgccgtccccgctcgagtccatcatcgcgctcgcccgcgacgacg 212 Query: 184 acgcgcgcctcctcttcctctcctccaaggccgcctccaccggcgtcacctccgcgccag 243 |||| |||||||||||||||||||||||||| ||| || |||||||| ||||||| || | Sbjct: 213 acgcccgcctcctcttcctctcctccaaggcagccaccgccggcgtctcctccgcccccg 272 Query: 244 tggcctccgggcagaccccgccctcctacgtggtgcgcgccgggctcggctcgccggccc 303 | |||||||| ||| |||| || |||||||| || || ||||| |||||||||||| | | Sbjct: 273 tcgcctccggccaggcccccccgtcctacgtcgtccgggccggcctcggctcgccgtcgc 332 Query: 304 agcccgtcctcctggccctcgacaccagcgccgacgccacctgggcgcactgctccccgt 363 ||| | || ||||| |||||||||||||||||||| || |||||||||||||| |||| Sbjct: 333 agcagctgctgctggcgctcgacaccagcgccgacgcgacgtgggcgcactgctcgccgt 392 Query: 364 gcggcacctgccccaccaacagcctcttcgtcccggccaa 403 ||||||| ||||| | || ||||||||||| ||||||||| Sbjct: 393 gcggcacgtgcccgagcagcagcctcttcgccccggccaa 432 Score = 289 bits (146), Expect = 1e-74 Identities = 263/302 (87%) Strand = Plus / Plus Query: 496 cggcgccgctgccgtcgtgcgccttctcgaagccgttcgccgacgcctccttccaggcgg 555 ||||| |||||||| ||||||||||||| ||||||||||||||||| || |||||||||| Sbjct: 537 cggcgacgctgccgacgtgcgccttctccaagccgttcgccgacgcgtcgttccaggcgg 596 Query: 556 agctggccagcgactggctgcatctgggcaaggactccatccccaactacgcgttcgggt 615 ||| ||||||||| |||| |||||||||||| ||||||| |||||| ||||||||| Sbjct: 597 cgctcgccagcgacacgctgaggctgggcaaggacgccatcccgaactacacgttcgggt 656 Query: 616 gcgtgggctcggtgagcgggccgacgtccaacctgccgaagcaggggctgctgggcctgg 675 ||||| ||||||||| ||||||||| | ||| |||| | ||| |||||||| ||||| | Sbjct: 657 gcgtgagctcggtgacggggccgacgacgaacatgccaaggcaagggctgctcggcctcg 716 Query: 676 gccggggccccatggccctgctgtcccaggtcggcaacatgtacaacggcgtcttctcct 735 | || ||||||||||| ||||| ||||||| ||| | | ||||||| ||||||||||||| Sbjct: 717 ggcgtggccccatggcgctgctctcccaggccgggagcttgtacaatggcgtcttctcct 776 Query: 736 actgcctcccgagctacaagtcgtactacttctccggctcgctccggctgggcaccgccg 795 |||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| || Sbjct: 777 actgcctcccgagctacaggtcatactacttctccggctcgctccggctgggcgccggcg 836 Query: 796 gc 797 || Sbjct: 837 gc 838
>ref|NM_001067056.1| Oryza sativa (japonica cultivar-group) Os07g0658600 (Os07g0658600) mRNA, complete cds Length = 1350 Score = 71.9 bits (36), Expect = 6e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 729 ttctcctactgcctcccgagctacaagtcgtactacttctccggctcgctccggct 784 |||||||||||||||||||||| ||||||| | ||||||||||| |||||||||| Sbjct: 748 ttctcctactgcctcccgagcttcaagtcgctcaacttctccggcacgctccggct 803 Score = 61.9 bits (31), Expect = 6e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 1243 tcaacgtcgtcgccaacctgcagcagcagaacctccggatcgtcttcgacgtcgccaact 1302 |||||||| |||||| | ||||||||||||||| ||| || |||||||||| ||||| Sbjct: 1250 tcaacgtcatcgccagcatgcagcagcagaaccaccgcgtcctcttcgacgtgcccaacg 1309 Query: 1303 cgcgcgtcggcttcgcccg 1321 ||||||||||||||||| Sbjct: 1310 gccgcgtcggcttcgcccg 1328 Score = 52.0 bits (26), Expect = 0.006 Identities = 35/38 (92%) Strand = Plus / Plus Query: 834 aacccccaccgctcgtcgctctactacgtgaacgtgac 871 ||||| ||||||||||||||||||||||| ||| |||| Sbjct: 853 aacccgcaccgctcgtcgctctactacgtcaacatgac 890 Score = 44.1 bits (22), Expect = 1.5 Identities = 64/78 (82%) Strand = Plus / Plus Query: 270 tacgtggtgcgcgccgggctcggctcgccggcccagcccgtcctcctggccctcgacacc 329 ||||||||||||||| | |||||| |||| || |||| | ||||| ||| |||||||| Sbjct: 319 tacgtggtgcgcgcccgcctcggcacgcccgcgcagcagctgctcctcgccgtcgacacc 378 Query: 330 agcgccgacgccacctgg 347 ||| ||||||| ||||| Sbjct: 379 agcaacgacgccgcctgg 396 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 936 acgggcgccggcacggtggtcgactc 961 |||||||||||||||||| ||||||| Sbjct: 955 acgggcgccggcacggtgctcgactc 980
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 71.9 bits (36), Expect = 6e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 729 ttctcctactgcctcccgagctacaagtcgtactacttctccggctcgctccggct 784 |||||||||||||||||||||| ||||||| | ||||||||||| |||||||||| Sbjct: 27693517 ttctcctactgcctcccgagcttcaagtcgctcaacttctccggcacgctccggct 27693572 Score = 61.9 bits (31), Expect = 6e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 1243 tcaacgtcgtcgccaacctgcagcagcagaacctccggatcgtcttcgacgtcgccaact 1302 |||||||| |||||| | ||||||||||||||| ||| || |||||||||| ||||| Sbjct: 27694019 tcaacgtcatcgccagcatgcagcagcagaaccaccgcgtcctcttcgacgtgcccaacg 27694078 Query: 1303 cgcgcgtcggcttcgcccg 1321 ||||||||||||||||| Sbjct: 27694079 gccgcgtcggcttcgcccg 27694097 Score = 52.0 bits (26), Expect = 0.006 Identities = 35/38 (92%) Strand = Plus / Plus Query: 834 aacccccaccgctcgtcgctctactacgtgaacgtgac 871 ||||| ||||||||||||||||||||||| ||| |||| Sbjct: 27693622 aacccgcaccgctcgtcgctctactacgtcaacatgac 27693659 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1410 tgtacgtacgtacgtacgtatg 1431 |||||||||||||||||||||| Sbjct: 23495890 tgtacgtacgtacgtacgtatg 23495869 Score = 44.1 bits (22), Expect = 1.5 Identities = 64/78 (82%) Strand = Plus / Plus Query: 270 tacgtggtgcgcgccgggctcggctcgccggcccagcccgtcctcctggccctcgacacc 329 ||||||||||||||| | |||||| |||| || |||| | ||||| ||| |||||||| Sbjct: 27693088 tacgtggtgcgcgcccgcctcggcacgcccgcgcagcagctgctcctcgccgtcgacacc 27693147 Query: 330 agcgccgacgccacctgg 347 ||| ||||||| ||||| Sbjct: 27693148 agcaacgacgccgcctgg 27693165 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 936 acgggcgccggcacggtggtcgactc 961 |||||||||||||||||| ||||||| Sbjct: 27693724 acgggcgccggcacggtgctcgactc 27693749
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 71.9 bits (36), Expect = 6e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 729 ttctcctactgcctcccgagctacaagtcgtactacttctccggctcgctccggct 784 |||||||||||||||||||||| ||||||| | ||||||||||| |||||||||| Sbjct: 72619 ttctcctactgcctcccgagcttcaagtcgctcaacttctccggcacgctccggct 72674 Score = 61.9 bits (31), Expect = 6e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 1243 tcaacgtcgtcgccaacctgcagcagcagaacctccggatcgtcttcgacgtcgccaact 1302 |||||||| |||||| | ||||||||||||||| ||| || |||||||||| ||||| Sbjct: 73121 tcaacgtcatcgccagcatgcagcagcagaaccaccgcgtcctcttcgacgtgcccaacg 73180 Query: 1303 cgcgcgtcggcttcgcccg 1321 ||||||||||||||||| Sbjct: 73181 gccgcgtcggcttcgcccg 73199 Score = 52.0 bits (26), Expect = 0.006 Identities = 35/38 (92%) Strand = Plus / Plus Query: 834 aacccccaccgctcgtcgctctactacgtgaacgtgac 871 ||||| ||||||||||||||||||||||| ||| |||| Sbjct: 72724 aacccgcaccgctcgtcgctctactacgtcaacatgac 72761 Score = 44.1 bits (22), Expect = 1.5 Identities = 64/78 (82%) Strand = Plus / Plus Query: 270 tacgtggtgcgcgccgggctcggctcgccggcccagcccgtcctcctggccctcgacacc 329 ||||||||||||||| | |||||| |||| || |||| | ||||| ||| |||||||| Sbjct: 72190 tacgtggtgcgcgcccgcctcggcacgcccgcgcagcagctgctcctcgccgtcgacacc 72249 Query: 330 agcgccgacgccacctgg 347 ||| ||||||| ||||| Sbjct: 72250 agcaacgacgccgcctgg 72267 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 936 acgggcgccggcacggtggtcgactc 961 |||||||||||||||||| ||||||| Sbjct: 72826 acgggcgccggcacggtgctcgactc 72851
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 71.9 bits (36), Expect = 6e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 729 ttctcctactgcctcccgagctacaagtcgtactacttctccggctcgctccggct 784 |||||||||||||||||||||| ||||||| | ||||||||||| |||||||||| Sbjct: 150510 ttctcctactgcctcccgagcttcaagtcgctcaacttctccggcacgctccggct 150565 Score = 61.9 bits (31), Expect = 6e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 1243 tcaacgtcgtcgccaacctgcagcagcagaacctccggatcgtcttcgacgtcgccaact 1302 |||||||| |||||| | ||||||||||||||| ||| || |||||||||| ||||| Sbjct: 151012 tcaacgtcatcgccagcatgcagcagcagaaccaccgcgtcctcttcgacgtgcccaacg 151071 Query: 1303 cgcgcgtcggcttcgcccg 1321 ||||||||||||||||| Sbjct: 151072 gccgcgtcggcttcgcccg 151090 Score = 52.0 bits (26), Expect = 0.006 Identities = 35/38 (92%) Strand = Plus / Plus Query: 834 aacccccaccgctcgtcgctctactacgtgaacgtgac 871 ||||| ||||||||||||||||||||||| ||| |||| Sbjct: 150615 aacccgcaccgctcgtcgctctactacgtcaacatgac 150652 Score = 44.1 bits (22), Expect = 1.5 Identities = 64/78 (82%) Strand = Plus / Plus Query: 270 tacgtggtgcgcgccgggctcggctcgccggcccagcccgtcctcctggccctcgacacc 329 ||||||||||||||| | |||||| |||| || |||| | ||||| ||| |||||||| Sbjct: 150081 tacgtggtgcgcgcccgcctcggcacgcccgcgcagcagctgctcctcgccgtcgacacc 150140 Query: 330 agcgccgacgccacctgg 347 ||| ||||||| ||||| Sbjct: 150141 agcaacgacgccgcctgg 150158 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 936 acgggcgccggcacggtggtcgactc 961 |||||||||||||||||| ||||||| Sbjct: 150717 acgggcgccggcacggtgctcgactc 150742
>gb|AY109945.1| Zea mays CL16097_1 mRNA sequence Length = 1050 Score = 56.0 bits (28), Expect = 4e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 1200 tgcctggccatggccgaggcgccgcagaacgtcaactccgtcgtcaacgtcgtcgccaac 1259 |||||||||||||||| |||||| | ||||||| |||| |||||||| |||||| | Sbjct: 325 tgcctggccatggccgcggcgcccgacggcgtcaacaccgtactcaacgtcatcgccagc 266 Query: 1260 ctgcagcagcagaacc 1275 ||||||||||||||| Sbjct: 265 atgcagcagcagaacc 250 Score = 52.0 bits (26), Expect = 0.006 Identities = 35/38 (92%) Strand = Plus / Minus Query: 834 aacccccaccgctcgtcgctctactacgtgaacgtgac 871 ||||| ||||| ||||||||||||||||||||| |||| Sbjct: 661 aacccgcaccggtcgtcgctctactacgtgaacatgac 624 Score = 48.1 bits (24), Expect = 0.093 Identities = 30/32 (93%) Strand = Plus / Minus Query: 1053 tcgctgggcgcgttcgacacgtgcttcaacac 1084 |||||||| | ||||||||||||||||||||| Sbjct: 460 tcgctgggagggttcgacacgtgcttcaacac 429
>ref|XM_001214726.1| Aspergillus terreus NIH2624 predicted protein (ATEG_05548) mRNA, complete cds Length = 1158 Score = 54.0 bits (27), Expect = 0.002 Identities = 27/27 (100%) Strand = Plus / Plus Query: 1249 tcgtcgccaacctgcagcagcagaacc 1275 ||||||||||||||||||||||||||| Sbjct: 743 tcgtcgccaacctgcagcagcagaacc 769
>gb|AC189331.1| Brassica rapa subsp. pekinensis clone KBrB037O12, complete sequence Length = 109500 Score = 52.0 bits (26), Expect = 0.006 Identities = 44/50 (88%) Strand = Plus / Plus Query: 723 ggcgtcttctcctactgcctcccgagctacaagtcgtactacttctccgg 772 ||||| ||||||||||||||||| |||| || ||| | |||||||||||| Sbjct: 103186 ggcgtgttctcctactgcctccctagcttcaggtccttctacttctccgg 103235 Score = 42.1 bits (21), Expect = 5.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1159 tggagaacacgctgatccacagcagcgcg 1187 ||||||||||||| || |||||||||||| Sbjct: 103607 tggagaacacgcttatacacagcagcgcg 103635
>ref|NM_001070037.1| Oryza sativa (japonica cultivar-group) Os09g0482300 (Os09g0482300) mRNA, complete cds Length = 1723 Score = 50.1 bits (25), Expect = 0.024 Identities = 31/33 (93%) Strand = Plus / Minus Query: 944 cggcacggtggtcgactccggcacggtcatcac 976 |||||||||| |||||||||||||||| ||||| Sbjct: 780 cggcacggtgatcgactccggcacggtgatcac 748
>ref|NM_001070036.1| Oryza sativa (japonica cultivar-group) Os09g0482200 (Os09g0482200) mRNA, complete cds Length = 1608 Score = 50.1 bits (25), Expect = 0.024 Identities = 31/33 (93%) Strand = Plus / Plus Query: 944 cggcacggtggtcgactccggcacggtcatcac 976 |||||||||| |||||||||||||||| ||||| Sbjct: 1161 cggcacggtgatcgactccggcacggtgatcac 1193
>ref|NM_001051969.1| Oryza sativa (japonica cultivar-group) Os01g0954900 (Os01g0954900) mRNA, complete cds Length = 1591 Score = 50.1 bits (25), Expect = 0.024 Identities = 40/45 (88%) Strand = Plus / Plus Query: 729 ttctcctactgcctcccgagctacaagtcgtactacttctccggc 773 ||||||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 791 ttctcctactgcctcccgaactacaggtcgtctaacttctccggc 835 Score = 42.1 bits (21), Expect = 5.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1054 cgctgggcgcgttcgacacgtgcttcaac 1082 ||||||||| |||||||||||||| |||| Sbjct: 1113 cgctgggcgggttcgacacgtgctacaac 1141
>ref|NM_100847.2| Arabidopsis thaliana pepsin A (AT1G09750) mRNA, complete cds Length = 1575 Score = 50.1 bits (25), Expect = 0.024 Identities = 34/37 (91%) Strand = Plus / Plus Query: 1151 gctgcccatggagaacacgctgatccacagcagcgcg 1187 |||||| |||||||| ||||| ||||||||||||||| Sbjct: 1204 gctgccgatggagaatacgcttatccacagcagcgcg 1240
>ref|NM_100848.3| Arabidopsis thaliana U2A'; protein binding (U2A') mRNA, complete cds Length = 1541 Score = 50.1 bits (25), Expect = 0.024 Identities = 34/37 (91%) Strand = Plus / Minus Query: 1151 gctgcccatggagaacacgctgatccacagcagcgcg 1187 |||||| |||||||| ||||| ||||||||||||||| Sbjct: 1513 gctgccgatggagaatacgcttatccacagcagcgcg 1477
>gb|AC145812.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0096A19 map near 50283S, complete sequence Length = 139969 Score = 50.1 bits (25), Expect = 0.024 Identities = 25/25 (100%) Strand = Plus / Plus Query: 1411 gtacgtacgtacgtacgtatgattg 1435 ||||||||||||||||||||||||| Sbjct: 31630 gtacgtacgtacgtacgtatgattg 31654
>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0087J09, complete sequence Length = 153351 Score = 50.1 bits (25), Expect = 0.024 Identities = 31/33 (93%) Strand = Plus / Plus Query: 944 cggcacggtggtcgactccggcacggtcatcac 976 |||||||||| |||||||||||||||| ||||| Sbjct: 8270 cggcacggtgatcgactccggcacggtgatcac 8302
>gb|AF370291.1| Arabidopsis thaliana unknown protein (At1g09750) mRNA, partial cds Length = 1330 Score = 50.1 bits (25), Expect = 0.024 Identities = 34/37 (91%) Strand = Plus / Plus Query: 1151 gctgcccatggagaacacgctgatccacagcagcgcg 1187 |||||| |||||||| ||||| ||||||||||||||| Sbjct: 943 gctgccgatggagaatacgcttatccacagcagcgcg 979
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 50.1 bits (25), Expect = 0.024 Identities = 25/25 (100%) Strand = Plus / Plus Query: 1411 gtacgtacgtacgtacgtatgattg 1435 ||||||||||||||||||||||||| Sbjct: 13794071 gtacgtacgtacgtacgtatgattg 13794095 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1410 tgtacgtacgtacgtacgtat 1430 ||||||||||||||||||||| Sbjct: 23722274 tgtacgtacgtacgtacgtat 23722294
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 50.1 bits (25), Expect = 0.024 Identities = 31/33 (93%) Strand = Plus / Plus Query: 944 cggcacggtggtcgactccggcacggtcatcac 976 |||||||||| |||||||||||||||| ||||| Sbjct: 18468805 cggcacggtgatcgactccggcacggtgatcac 18468837 Score = 50.1 bits (25), Expect = 0.024 Identities = 31/33 (93%) Strand = Plus / Plus Query: 944 cggcacggtggtcgactccggcacggtcatcac 976 |||||||||| |||||||||||||||| ||||| Sbjct: 18480264 cggcacggtgatcgactccggcacggtgatcac 18480296
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 50.1 bits (25), Expect = 0.024 Identities = 40/45 (88%) Strand = Plus / Minus Query: 729 ttctcctactgcctcccgagctacaagtcgtactacttctccggc 773 ||||||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 42052153 ttctcctactgcctcccgaactacaggtcgtctaacttctccggc 42052109 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1410 tgtacgtacgtacgtacgtatg 1431 |||||||||||||||||||||| Sbjct: 24523538 tgtacgtacgtacgtacgtatg 24523559 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 ttcctcctcctcctcgccgcc 86 ||||||||||||||||||||| Sbjct: 39627599 ttcctcctcctcctcgccgcc 39627619 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 ttcctcctcctcctcgccgcc 86 ||||||||||||||||||||| Sbjct: 39627641 ttcctcctcctcctcgccgcc 39627661 Score = 42.1 bits (21), Expect = 5.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1054 cgctgggcgcgttcgacacgtgcttcaac 1082 ||||||||| |||||||||||||| |||| Sbjct: 42051831 cgctgggcgggttcgacacgtgctacaac 42051803
>dbj|AP004368.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1139B11 Length = 136548 Score = 50.1 bits (25), Expect = 0.024 Identities = 40/45 (88%) Strand = Plus / Minus Query: 729 ttctcctactgcctcccgagctacaagtcgtactacttctccggc 773 ||||||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 38958 ttctcctactgcctcccgaactacaggtcgtctaacttctccggc 38914 Score = 42.1 bits (21), Expect = 5.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1054 cgctgggcgcgttcgacacgtgcttcaac 1082 ||||||||| |||||||||||||| |||| Sbjct: 38636 cgctgggcgggttcgacacgtgctacaac 38608
>gb|AY088375.1| Arabidopsis thaliana clone 6295 mRNA, complete sequence Length = 1575 Score = 50.1 bits (25), Expect = 0.024 Identities = 34/37 (91%) Strand = Plus / Plus Query: 1151 gctgcccatggagaacacgctgatccacagcagcgcg 1187 |||||| |||||||| ||||| ||||||||||||||| Sbjct: 1204 gctgccgatggagaatacgcttatccacagcagcgcg 1240
>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463D04 Length = 145828 Score = 50.1 bits (25), Expect = 0.024 Identities = 31/33 (93%) Strand = Plus / Plus Query: 944 cggcacggtggtcgactccggcacggtcatcac 976 |||||||||| |||||||||||||||| ||||| Sbjct: 130679 cggcacggtgatcgactccggcacggtgatcac 130711 Score = 50.1 bits (25), Expect = 0.024 Identities = 31/33 (93%) Strand = Plus / Plus Query: 944 cggcacggtggtcgactccggcacggtcatcac 976 |||||||||| |||||||||||||||| ||||| Sbjct: 142138 cggcacggtgatcgactccggcacggtgatcac 142170
>gb|BT002332.1| Arabidopsis thaliana clone C104927 unknown protein (At1g09750) mRNA, complete cds Length = 1381 Score = 50.1 bits (25), Expect = 0.024 Identities = 34/37 (91%) Strand = Plus / Plus Query: 1151 gctgcccatggagaacacgctgatccacagcagcgcg 1187 |||||| |||||||| ||||| ||||||||||||||| Sbjct: 1164 gctgccgatggagaatacgcttatccacagcagcgcg 1200
>dbj|AK110957.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-A08, full insert sequence Length = 1591 Score = 50.1 bits (25), Expect = 0.024 Identities = 40/45 (88%) Strand = Plus / Plus Query: 729 ttctcctactgcctcccgagctacaagtcgtactacttctccggc 773 ||||||||||||||||||| ||||| ||||| ||||||||||| Sbjct: 791 ttctcctactgcctcccgaactacaggtcgtctaacttctccggc 835 Score = 42.1 bits (21), Expect = 5.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1054 cgctgggcgcgttcgacacgtgcttcaac 1082 ||||||||| |||||||||||||| |||| Sbjct: 1113 cgctgggcgggttcgacacgtgctacaac 1141
>dbj|AK108029.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-B01, full insert sequence Length = 1723 Score = 50.1 bits (25), Expect = 0.024 Identities = 31/33 (93%) Strand = Plus / Minus Query: 944 cggcacggtggtcgactccggcacggtcatcac 976 |||||||||| |||||||||||||||| ||||| Sbjct: 780 cggcacggtgatcgactccggcacggtgatcac 748
>emb|BX815383.1|CNS0ABJT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZD12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1498 Score = 50.1 bits (25), Expect = 0.024 Identities = 34/37 (91%) Strand = Plus / Plus Query: 1151 gctgcccatggagaacacgctgatccacagcagcgcg 1187 |||||| |||||||| ||||| ||||||||||||||| Sbjct: 1188 gctgccgatggagaatacgcttatccacagcagcgcg 1224
>emb|BX815490.1|CNS0ABCW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS66ZD03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1502 Score = 50.1 bits (25), Expect = 0.024 Identities = 34/37 (91%) Strand = Plus / Plus Query: 1151 gctgcccatggagaacacgctgatccacagcagcgcg 1187 |||||| |||||||| ||||| ||||||||||||||| Sbjct: 1188 gctgccgatggagaatacgcttatccacagcagcgcg 1224
>gb|AC000132.1|F21M12 Sequence of BAC F21M12 from Arabidopsis thaliana chromosome 1, complete sequence Length = 146505 Score = 50.1 bits (25), Expect = 0.024 Identities = 34/37 (91%) Strand = Plus / Plus Query: 1151 gctgcccatggagaacacgctgatccacagcagcgcg 1187 |||||| |||||||| ||||| ||||||||||||||| Sbjct: 45660 gctgccgatggagaatacgcttatccacagcagcgcg 45696
>emb|CT829717.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN023H03, full insert sequence Length = 1928 Score = 48.1 bits (24), Expect = 0.093 Identities = 33/36 (91%) Strand = Plus / Plus Query: 941 cgccggcacggtggtcgactccggcacggtcatcac 976 |||||||||| | ||||||||||||||||| ||||| Sbjct: 1242 cgccggcacgatcgtcgactccggcacggtgatcac 1277
>ref|NM_001067942.1| Oryza sativa (japonica cultivar-group) Os08g0267300 (Os08g0267300) mRNA, complete cds Length = 1575 Score = 48.1 bits (24), Expect = 0.093 Identities = 24/24 (100%) Strand = Plus / Plus Query: 722 cggcgtcttctcctactgcctccc 745 |||||||||||||||||||||||| Sbjct: 960 cggcgtcttctcctactgcctccc 983
>ref|NM_001064590.1| Oryza sativa (japonica cultivar-group) Os06g0610800 (Os06g0610800) mRNA, complete cds Length = 1796 Score = 48.1 bits (24), Expect = 0.093 Identities = 33/36 (91%) Strand = Plus / Plus Query: 941 cgccggcacggtggtcgactccggcacggtcatcac 976 |||||||||| | ||||||||||||||||| ||||| Sbjct: 1242 cgccggcacgatcgtcgactccggcacggtgatcac 1277
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 48.1 bits (24), Expect = 0.093 Identities = 27/28 (96%) Strand = Plus / Plus Query: 648 ctgccgaagcaggggctgctgggcctgg 675 ||||||| |||||||||||||||||||| Sbjct: 932732 ctgccgatgcaggggctgctgggcctgg 932759
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 48.1 bits (24), Expect = 0.093 Identities = 24/24 (100%) Strand = Plus / Minus Query: 722 cggcgtcttctcctactgcctccc 745 |||||||||||||||||||||||| Sbjct: 10184411 cggcgtcttctcctactgcctccc 10184388 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1409 gtgtacgtacgtacgtacgta 1429 ||||||||||||||||||||| Sbjct: 9990871 gtgtacgtacgtacgtacgta 9990851 Score = 42.1 bits (21), Expect = 5.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 68 cctcctcctcctcgccgccacagtcgccg 96 ||||||||||||||||||| ||| ||||| Sbjct: 26789363 cctcctcctcctcgccgccgcagccgccg 26789391
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 48.1 bits (24), Expect = 0.093 Identities = 33/36 (91%) Strand = Plus / Plus Query: 941 cgccggcacggtggtcgactccggcacggtcatcac 976 |||||||||| | ||||||||||||||||| ||||| Sbjct: 23969745 cgccggcacgatcgtcgactccggcacggtgatcac 23969780 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 955 tcgactccggcacggtcatcac 976 |||||||||||||||||||||| Sbjct: 11426825 tcgactccggcacggtcatcac 11426846 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 726 gtcttctcctactgcctcccg 746 ||||||||||||||||||||| Sbjct: 1063463 gtcttctcctactgcctcccg 1063443
>dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0490F09 Length = 149542 Score = 48.1 bits (24), Expect = 0.093 Identities = 33/36 (91%) Strand = Plus / Plus Query: 941 cgccggcacggtggtcgactccggcacggtcatcac 976 |||||||||| | ||||||||||||||||| ||||| Sbjct: 99356 cgccggcacgatcgtcgactccggcacggtgatcac 99391
>dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0023I13 Length = 165911 Score = 48.1 bits (24), Expect = 0.093 Identities = 24/24 (100%) Strand = Plus / Minus Query: 722 cggcgtcttctcctactgcctccc 745 |||||||||||||||||||||||| Sbjct: 143757 cggcgtcttctcctactgcctccc 143734
>dbj|AK105097.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-B11, full insert sequence Length = 2569 Score = 48.1 bits (24), Expect = 0.093 Identities = 24/24 (100%) Strand = Plus / Plus Query: 722 cggcgtcttctcctactgcctccc 745 |||||||||||||||||||||||| Sbjct: 1850 cggcgtcttctcctactgcctccc 1873
>dbj|AK066754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074G14, full insert sequence Length = 1797 Score = 48.1 bits (24), Expect = 0.093 Identities = 33/36 (91%) Strand = Plus / Plus Query: 941 cgccggcacggtggtcgactccggcacggtcatcac 976 |||||||||| | ||||||||||||||||| ||||| Sbjct: 1243 cgccggcacgatcgtcgactccggcacggtgatcac 1278
>gb|BT025998.1| Arabidopsis thaliana At5g07030 mRNA, complete cds Length = 1320 Score = 46.1 bits (23), Expect = 0.37 Identities = 83/103 (80%) Strand = Plus / Plus Query: 1198 cgtgcctggccatggccgaggcgccgcagaacgtcaactccgtcgtcaacgtcgtcgcca 1257 ||||||| |||||||| | |||||| | ||||| ||||| |||||||| || |||| | Sbjct: 1181 cgtgcctcgccatggctgcagcgccggaaaacgtaaactctgtcgtcaatgtgatcgcaa 1240 Query: 1258 acctgcagcagcagaacctccggatcgtcttcgacgtcgccaa 1300 | ||||||||||||||| ||| || || |||||||| |||| Sbjct: 1241 gcatgcagcagcagaaccaccgtgtcctcatcgacgtccccaa 1283
>ref|NM_120785.3| Arabidopsis thaliana pepsin A (AT5G07030) mRNA, complete cds Length = 1863 Score = 46.1 bits (23), Expect = 0.37 Identities = 83/103 (80%) Strand = Plus / Plus Query: 1198 cgtgcctggccatggccgaggcgccgcagaacgtcaactccgtcgtcaacgtcgtcgcca 1257 ||||||| |||||||| | |||||| | ||||| ||||| |||||||| || |||| | Sbjct: 1484 cgtgcctcgccatggctgcagcgccggaaaacgtaaactctgtcgtcaatgtgatcgcaa 1543 Query: 1258 acctgcagcagcagaacctccggatcgtcttcgacgtcgccaa 1300 | ||||||||||||||| ||| || || |||||||| |||| Sbjct: 1544 gcatgcagcagcagaaccaccgtgtcctcatcgacgtccccaa 1586
>gb|AC113063.8| Mus musculus chromosome 15, clone RP23-261F24, complete sequence Length = 218490 Score = 46.1 bits (23), Expect = 0.37 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1409 gtgtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||||| Sbjct: 10059 gtgtacgtacgtacgtacgtatg 10037
>gb|AC140451.3| Mus musculus BAC clone RP23-52L6 from chromosome 14, complete sequence Length = 224897 Score = 46.1 bits (23), Expect = 0.37 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1409 gtgtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||||| Sbjct: 104911 gtgtacgtacgtacgtacgtatg 104889
>gb|AC122025.3| Mus musculus BAC clone RP24-388G8 from 12, complete sequence Length = 202612 Score = 46.1 bits (23), Expect = 0.37 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1409 gtgtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||||| Sbjct: 134746 gtgtacgtacgtacgtacgtatg 134768
>gb|AY046057.1| Escherichia fergusonii strain EF873 aerobactin synthesis and receptor region Length = 36688 Score = 46.1 bits (23), Expect = 0.37 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1003 cgctgcgggaggagttcaggcgc 1025 ||||||||||||||||||||||| Sbjct: 17896 cgctgcgggaggagttcaggcgc 17874
>gb|AY085521.1| Arabidopsis thaliana clone 15560 mRNA, complete sequence Length = 1580 Score = 46.1 bits (23), Expect = 0.37 Identities = 83/103 (80%) Strand = Plus / Plus Query: 1198 cgtgcctggccatggccgaggcgccgcagaacgtcaactccgtcgtcaacgtcgtcgcca 1257 ||||||| |||||||| | |||||| | ||||| ||||| |||||||| || |||| | Sbjct: 1212 cgtgcctcgccatggctgcagcgccggaaaacgtaaactctgtcgtcaatgtgatcgcaa 1271 Query: 1258 acctgcagcagcagaacctccggatcgtcttcgacgtcgccaa 1300 | ||||||||||||||| ||| || || |||||||| |||| Sbjct: 1272 gcatgcagcagcagaaccaccgtgtcctcatcgacgtccccaa 1314
>dbj|AB010697.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOJ9 Length = 86380 Score = 46.1 bits (23), Expect = 0.37 Identities = 83/103 (80%) Strand = Plus / Minus Query: 1198 cgtgcctggccatggccgaggcgccgcagaacgtcaactccgtcgtcaacgtcgtcgcca 1257 ||||||| |||||||| | |||||| | ||||| ||||| |||||||| || |||| | Sbjct: 62715 cgtgcctcgccatggctgcagcgccggaaaacgtaaactctgtcgtcaatgtgatcgcaa 62656 Query: 1258 acctgcagcagcagaacctccggatcgtcttcgacgtcgccaa 1300 | ||||||||||||||| ||| || || |||||||| |||| Sbjct: 62655 gcatgcagcagcagaaccaccgtgtcctcatcgacgtccccaa 62613
>emb|BX832422.1|CNS0A140 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH71ZE12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1545 Score = 46.1 bits (23), Expect = 0.37 Identities = 83/103 (80%) Strand = Plus / Plus Query: 1198 cgtgcctggccatggccgaggcgccgcagaacgtcaactccgtcgtcaacgtcgtcgcca 1257 ||||||| |||||||| | |||||| | ||||| ||||| |||||||| || |||| | Sbjct: 1199 cgtgcctcgccatggctgcagcgccggaaaacgtaaactctgtcgtcaatgtgatcgcaa 1258 Query: 1258 acctgcagcagcagaacctccggatcgtcttcgacgtcgccaa 1300 | ||||||||||||||| ||| || || |||||||| |||| Sbjct: 1259 gcatgcagcagcagaaccaccgtgtcctcatcgacgtccccaa 1301
>gb|AY895861.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 253933 dehydrin 1 (Dhn1) gene, partial cds Length = 1243 Score = 46.1 bits (23), Expect = 0.37 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1409 gtgtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||||| Sbjct: 264 gtgtacgtacgtacgtacgtatg 286
>gb|AY895859.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 219796 dehydrin 1 (Dhn1) gene, partial cds Length = 1243 Score = 46.1 bits (23), Expect = 0.37 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1409 gtgtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||||| Sbjct: 264 gtgtacgtacgtacgtacgtatg 286
>gb|AC118008.14| Mus musculus chromosome 15, clone RP23-435B2, complete sequence Length = 204342 Score = 46.1 bits (23), Expect = 0.37 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1409 gtgtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||||| Sbjct: 15449 gtgtacgtacgtacgtacgtatg 15471
>gb|CP000458.1| Burkholderia cenocepacia HI2424 chromosome 1, complete genome Length = 3483902 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 488 cgacagcgcggcgccgctgccgtcgt 513 |||| ||||||||||||||||||||| Sbjct: 149281 cgacggcgcggcgccgctgccgtcgt 149256
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1100 cgggggcgcgccggccgtgacgatcc 1125 ||||||||||||||| |||||||||| Sbjct: 9234743 cgggggcgcgccggcggtgacgatcc 9234718
>dbj|AK242653.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090026I09, full insert sequence Length = 2469 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 tcctcctcctcctcgccgccac 88 |||||||||||||||||||||| Sbjct: 346 tcctcctcctcctcgccgccac 325
>ref|NM_001053456.1| Oryza sativa (japonica cultivar-group) Os02g0507100 (Os02g0507100) mRNA, complete cds Length = 667 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1408 ggtgtacgtacgtacgtacgta 1429 |||||||||||||||||||||| Sbjct: 558 ggtgtacgtacgtacgtacgta 537
>ref|NM_001053285.1| Oryza sativa (japonica cultivar-group) Os02g0445700 (Os02g0445700) mRNA, complete cds Length = 1620 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 tcctcctcctcctcgccgccac 88 |||||||||||||||||||||| Sbjct: 25 tcctcctcctcctcgccgccac 4
>emb|CT990635.10| Mouse DNA sequence from clone bMQ-322M12 on chromosome 4, complete sequence Length = 191695 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1410 tgtacgtacgtacgtacgtatg 1431 |||||||||||||||||||||| Sbjct: 7822 tgtacgtacgtacgtacgtatg 7843
>gb|AC121001.5| Rattus norvegicus BAC CH230-189D6 () complete sequence Length = 212045 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1410 tgtacgtacgtacgtacgtatg 1431 |||||||||||||||||||||| Sbjct: 67055 tgtacgtacgtacgtacgtatg 67034
>gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome Length = 3225748 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 527 gccgttcgccgacgcctccttc 548 |||||||||||||||||||||| Sbjct: 990811 gccgttcgccgacgcctccttc 990790 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1282 tcgtcttcgacgtcgccaact 1302 ||||||||||||||||||||| Sbjct: 1252998 tcgtcttcgacgtcgccaact 1253018
>gb|CP000378.1| Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence Length = 3294563 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 488 cgacagcgcggcgccgctgccgtcgt 513 |||| ||||||||||||||||||||| Sbjct: 3217730 cgacggcgcggcgccgctgccgtcgt 3217755
>gb|DQ417752.1| Zea mays B73 pathogenesis-related protein 2 and GASA-like protein genes, complete cds Length = 156772 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1409 gtgtacgtacgtacgtacgtat 1430 |||||||||||||||||||||| Sbjct: 60176 gtgtacgtacgtacgtacgtat 60197
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1178 cagcagcgcgacgccgctggcgtgcc 1203 |||||||||| ||||||||||||||| Sbjct: 1948148 cagcagcgcgtcgccgctggcgtgcc 1948173 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1244 caacgtcgtcgccaacctgcagcag 1268 |||| |||||||||||||||||||| Sbjct: 575381 caacatcgtcgccaacctgcagcag 575357
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1205 ggccatggccgaggcgccgcag 1226 |||||||||||||||||||||| Sbjct: 2883435 ggccatggccgaggcgccgcag 2883456
>ref|XM_359535.1| Magnaporthe grisea 70-15 hypothetical protein (MG05242.4) partial mRNA Length = 927 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 tcctcctcctcctcgccgccac 88 |||||||||||||||||||||| Sbjct: 506 tcctcctcctcctcgccgccac 485
>gb|AY021307.1| Oryza sativa microsatellite MRG3632 containing (TA)X23, genomic sequence Length = 246 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1410 tgtacgtacgtacgtacgtatg 1431 |||||||||||||||||||||| Sbjct: 195 tgtacgtacgtacgtacgtatg 216
>gb|AC135502.4| Oryza sativa chromosome 3 BAC OSJNBb0085A04 genomic sequence, complete sequence Length = 132292 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 ctcctcctcctcgccgccacag 90 |||||||||||||||||||||| Sbjct: 14809 ctcctcctcctcgccgccacag 14830
>gb|DQ160293.1| Synthetic construct cell surface glycoprotein BM86 (BM86) mRNA, complete cds Length = 1953 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 tcctcctcctcctcgccgccac 88 |||||||||||||||||||||| Sbjct: 1907 tcctcctcctcctcgccgccac 1928
>gb|AY281354.1| Uncultured Acidobacteria bacterium clone 38c7 genomic sequence Length = 39263 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 275 ggtgcgcgccgggctcggctcg 296 |||||||||||||||||||||| Sbjct: 27379 ggtgcgcgccgggctcggctcg 27400
>gb|AC107661.10| Mus musculus chromosome 10, clone RP23-174M1, complete sequence Length = 187233 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1410 tgtacgtacgtacgtacgtatg 1431 |||||||||||||||||||||| Sbjct: 80073 tgtacgtacgtacgtacgtatg 80052
>gb|AC106461.6| Rattus norvegicus 1 BAC CH230-208N10 (Children's Hospital Oakland Research Institute) complete sequence Length = 212829 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1406 tgggtgtacgtacgtacgtacgtatg 1431 |||||||||||||||||||| ||||| Sbjct: 152889 tgggtgtacgtacgtacgtatgtatg 152914
>gb|AC162856.2| Mus musculus chromosome 8, clone RP23-51I4, complete sequence Length = 247161 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1410 tgtacgtacgtacgtacgtatg 1431 |||||||||||||||||||||| Sbjct: 6988 tgtacgtacgtacgtacgtatg 6967
>gb|AC116675.11| Mus musculus chromosome 8, clone RP23-16M20, complete sequence Length = 214196 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1410 tgtacgtacgtacgtacgtatg 1431 |||||||||||||||||||||| Sbjct: 65472 tgtacgtacgtacgtacgtatg 65451
>gb|AC164163.2| Mus musculus BAC clone RP23-243L21 from chromosome 16, complete sequence Length = 178656 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1410 tgtacgtacgtacgtacgtatg 1431 |||||||||||||||||||||| Sbjct: 64426 tgtacgtacgtacgtacgtatg 64405
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 tcctcctcctcctcgccgccac 88 |||||||||||||||||||||| Sbjct: 14461619 tcctcctcctcctcgccgccac 14461640 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1408 ggtgtacgtacgtacgtacgta 1429 |||||||||||||||||||||| Sbjct: 18192504 ggtgtacgtacgtacgtacgta 18192483 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 213 gccgcctccaccggcgtcacctccg 237 ||||||||| ||||||||||||||| Sbjct: 564237 gccgcctccgccggcgtcacctccg 564261 Score = 42.1 bits (21), Expect = 5.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 68 cctcctcctcctcgccgccacagtcgccgcggccgccgacc 108 ||||||||||||||||||| | | |||||| |||| ||||| Sbjct: 20795663 cctcctcctcctcgccgcccccgccgccgccgccggcgacc 20795703 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 tttcctcctcctcctcgccgc 85 ||||||||||||||||||||| Sbjct: 29487227 tttcctcctcctcctcgccgc 29487207 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 722 cggcgtcttctcctactgcct 742 ||||||||||||||||||||| Sbjct: 29908716 cggcgtcttctcctactgcct 29908736
>emb|X58895.1|UCHISTO U.caupo gene for H2A, H2B, H3, and H4 histones Length = 4942 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1410 tgtacgtacgtacgtacgtatg 1431 |||||||||||||||||||||| Sbjct: 3689 tgtacgtacgtacgtacgtatg 3668 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1410 tgtacgtacgtacgtacgtatg 1431 |||||||||||||||||||||| Sbjct: 3766 tgtacgtacgtacgtacgtatg 3745
>gb|AC132231.6| Mus musculus BAC clone RP24-484D4 from chromosome 1, complete sequence Length = 188905 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1410 tgtacgtacgtacgtacgtatg 1431 |||||||||||||||||||||| Sbjct: 148418 tgtacgtacgtacgtacgtatg 148397
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 785 gggcaccgccggccagccccgg 806 |||||||||||||||||||||| Sbjct: 878208 gggcaccgccggccagccccgg 878229
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 44.1 bits (22), Expect = 1.5 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 tcgcccgcgacgacgacgcgcgcctc 194 |||||| ||||||||||||||||||| Sbjct: 34751 tcgccctcgacgacgacgcgcgcctc 34776
>emb|AL683829.15| Mouse DNA sequence from clone RP23-64F17 on chromosome 4 Contains two novel genes, the gene for a novel major urinary protein (Mup) family member, the Zfp37 gene for zinc finger protein 37, the Slc31a2 gene for solute carrier family 31 member 2 and two CpG islands, complete sequence Length = 223133 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1410 tgtacgtacgtacgtacgtatg 1431 |||||||||||||||||||||| Sbjct: 141578 tgtacgtacgtacgtacgtatg 141557
>emb|BX511149.9| Zebrafish DNA sequence from clone DKEYP-14G8 in linkage group 1, complete sequence Length = 98046 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1410 tgtacgtacgtacgtacgtatg 1431 |||||||||||||||||||||| Sbjct: 59152 tgtacgtacgtacgtacgtatg 59173
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1386G10 Length = 121827 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 955 tcgactccggcacggtcatcac 976 |||||||||||||||||||||| Sbjct: 114534 tcgactccggcacggtcatcac 114555
>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0686E09 Length = 156425 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1410 tgtacgtacgtacgtacgtatg 1431 |||||||||||||||||||||| Sbjct: 103922 tgtacgtacgtacgtacgtatg 103943
>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1301_C12 Length = 128396 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1410 tgtacgtacgtacgtacgtatg 1431 |||||||||||||||||||||| Sbjct: 56283 tgtacgtacgtacgtacgtatg 56262
>dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453G03 Length = 144480 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1410 tgtacgtacgtacgtacgtatg 1431 |||||||||||||||||||||| Sbjct: 115787 tgtacgtacgtacgtacgtatg 115766
>dbj|AP004134.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_C12 Length = 116758 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 67 tcctcctcctcctcgccgccac 88 |||||||||||||||||||||| Sbjct: 70117 tcctcctcctcctcgccgccac 70138
>dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0047E05 Length = 184323 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1408 ggtgtacgtacgtacgtacgta 1429 |||||||||||||||||||||| Sbjct: 115905 ggtgtacgtacgtacgtacgta 115884
>dbj|AK107706.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-D04, full insert sequence Length = 667 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1408 ggtgtacgtacgtacgtacgta 1429 |||||||||||||||||||||| Sbjct: 558 ggtgtacgtacgtacgtacgta 537
>gb|AC151756.2| Ornithorhynchus anatinus chromosome UNK clone OABb-466P24, complete sequence Length = 156508 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gcctcctcttcctctcctccaa 211 |||||||||||||||||||||| Sbjct: 77469 gcctcctcttcctctcctccaa 77490
>emb|CT030235.12| Mouse DNA sequence from clone RP23-240F19 on chromosome 16, complete sequence Length = 236028 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1410 tgtacgtacgtacgtacgtatg 1431 |||||||||||||||||||||| Sbjct: 222129 tgtacgtacgtacgtacgtatg 222150
>emb|AL929194.8| Mouse DNA sequence from clone RP23-385L14 on chromosome 2, complete sequence Length = 120827 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1410 tgtacgtacgtacgtacgtatg 1431 |||||||||||||||||||||| Sbjct: 113567 tgtacgtacgtacgtacgtatg 113546
>emb|AL831793.4| Mouse DNA sequence from clone RP23-9F23 on chromosome 4, complete sequence Length = 236470 Score = 44.1 bits (22), Expect = 1.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1410 tgtacgtacgtacgtacgtatg 1431 |||||||||||||||||||||| Sbjct: 154964 tgtacgtacgtacgtacgtatg 154943
>gb|DQ245488.1| Zea mays clone 16094 mRNA sequence Length = 952 Score = 42.1 bits (21), Expect = 5.7 Identities = 35/39 (89%), Gaps = 3/39 (7%) Strand = Plus / Plus Query: 68 cctcctcctcctcgccgccacagtcgccgcggccgccga 106 ||||||||||||||||||| |||||||| |||||||| Sbjct: 486 cctcctcctcctcgccgcc---gtcgccgccgccgccga 521
>gb|CP000481.1| Acidothermus cellulolyticus 11B, complete genome Length = 2443540 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1098 gccgggggcgcgccggccgtgacga 1122 |||||| |||||||||||||||||| Sbjct: 1184167 gccgggtgcgcgccggccgtgacga 1184143
>emb|CT835303.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA021M13, full insert sequence Length = 1091 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 tcctcctcctcctcgccgcca 87 ||||||||||||||||||||| Sbjct: 608 tcctcctcctcctcgccgcca 588
>emb|CT835180.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA104D23, full insert sequence Length = 1397 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 ttcctcctcctcctcgccgcc 86 ||||||||||||||||||||| Sbjct: 49 ttcctcctcctcctcgccgcc 69
>emb|CR855139.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0404F02, complete sequence Length = 130181 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 60576 gtacgtacgtacgtacgtatg 60556
>ref|NM_001068898.1| Oryza sativa (japonica cultivar-group) Os08g0536300 (Os08g0536300) mRNA, partial cds Length = 1891 Score = 42.1 bits (21), Expect = 5.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 68 cctcctcctcctcgccgccacagtcgccg 96 ||||||||||||||||||| ||| ||||| Sbjct: 510 cctcctcctcctcgccgccgcagccgccg 482
>ref|NM_001063168.1| Oryza sativa (japonica cultivar-group) Os06g0119600 (Os06g0119600) mRNA, complete cds Length = 1898 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 726 gtcttctcctactgcctcccg 746 ||||||||||||||||||||| Sbjct: 978 gtcttctcctactgcctcccg 998
>ref|NM_001058325.1| Oryza sativa (japonica cultivar-group) Os03g0830900 (Os03g0830900) mRNA, complete cds Length = 1926 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 tcctcctcctcctcgccgcca 87 ||||||||||||||||||||| Sbjct: 282 tcctcctcctcctcgccgcca 262
>ref|NM_001054437.1| Oryza sativa (japonica cultivar-group) Os02g0711300 (Os02g0711300) mRNA, complete cds Length = 743 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 tttcctcctcctcctcgccgc 85 ||||||||||||||||||||| Sbjct: 322 tttcctcctcctcctcgccgc 302
>ref|NM_001053636.1| Oryza sativa (japonica cultivar-group) Os02g0551600 (Os02g0551600) mRNA, complete cds Length = 838 Score = 42.1 bits (21), Expect = 5.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 68 cctcctcctcctcgccgccacagtcgccgcggccgccgacc 108 ||||||||||||||||||| | | |||||| |||| ||||| Sbjct: 23 cctcctcctcctcgccgcccccgccgccgccgccggcgacc 63
>ref|NM_001052184.1| Oryza sativa (japonica cultivar-group) Os02g0110400 (Os02g0110400) mRNA, complete cds Length = 2532 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 213 gccgcctccaccggcgtcacctccg 237 ||||||||| ||||||||||||||| Sbjct: 192 gccgcctccgccggcgtcacctccg 168
>emb|AM181037.1| Vulpes vulpes complete mitochondrial genome Length = 16813 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1409 gtgtacgtacgtacgtacgta 1429 ||||||||||||||||||||| Sbjct: 16425 gtgtacgtacgtacgtacgta 16405
>emb|AM181023.1| Mirounga leonina complete mitochondrial genome Length = 16970 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1409 gtgtacgtacgtacgtacgta 1429 ||||||||||||||||||||| Sbjct: 16201 gtgtacgtacgtacgtacgta 16181
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1406 tgggtgtacgtacgtacgtac 1426 ||||||||||||||||||||| Sbjct: 6154104 tgggtgtacgtacgtacgtac 6154084
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 796 gccagccccgggcggcgaggt 816 ||||||||||||||||||||| Sbjct: 32592 gccagccccgggcggcgaggt 32572 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 ccgcctccaccggcgtcacct 234 ||||||||||||||||||||| Sbjct: 1953030 ccgcctccaccggcgtcacct 1953050
>gb|AC171137.2| Helobdella robusta clone CH306-1A8, complete sequence Length = 115977 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 46562 gtacgtacgtacgtacgtatg 46542
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 catggcggccatcacggcggc 64 ||||||||||||||||||||| Sbjct: 925362 catggcggccatcacggcggc 925342
>gb|AC166060.2| Mus musculus BAC clone RP23-185O8 from chromosome 9, complete sequence Length = 198365 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1409 gtgtacgtacgtacgtacgta 1429 ||||||||||||||||||||| Sbjct: 101570 gtgtacgtacgtacgtacgta 101590
>gb|AF402962.1| Oryza sativa chromosome 4 clone Y5, genomic sequence Length = 23480 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 184 acgcgcgcctcctcttcctct 204 ||||||||||||||||||||| Sbjct: 12951 acgcgcgcctcctcttcctct 12931
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 cctccaccggcgtcacctccg 237 ||||||||||||||||||||| Sbjct: 3414542 cctccaccggcgtcacctccg 3414562
>gb|AF061282.1| Sorghum bicolor 22 kDa kafirin cluster Length = 162249 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 81930 gtacgtacgtacgtacgtatg 81910
>gb|AC120543.7| Mus musculus chromosome 8, clone RP23-330A24, complete sequence Length = 210696 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 ctcctcttcctctcctccaag 212 ||||||||||||||||||||| Sbjct: 167408 ctcctcttcctctcctccaag 167388
>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC nbxb0045B21, complete sequence Length = 152397 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 109809 gtacgtacgtacgtacgtatg 109789
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 3219 gtacgtacgtacgtacgtatg 3239
>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16, complete sequence Length = 159525 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 ttcctcctcctcctcgccgcc 86 ||||||||||||||||||||| Sbjct: 69905 ttcctcctcctcctcgccgcc 69885
>gb|AC109832.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone P0038B07, complete sequence Length = 149697 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1410 tgtacgtacgtacgtacgtat 1430 ||||||||||||||||||||| Sbjct: 56364 tgtacgtacgtacgtacgtat 56384
>gb|AY135017.1| Zea mays PL transcription factor (pl) gene, pl-bol3c allele, complete cds Length = 1647 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 959 gtacgtacgtacgtacgtatg 939
>gb|AY135016.1| Zea mays PL transcription factor (pl) gene, pl-bo3b allele, complete cds Length = 1771 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 998 gtacgtacgtacgtacgtatg 978
>gb|AY135015.1| Zea mays PL transcription factor (pl) gene, pl-bo3a allele, exon 3 and partial cds Length = 774 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 53 gtacgtacgtacgtacgtatg 33
>gb|BC058965.1| Mus musculus neurogenic differentiation 2, mRNA (cDNA clone MGC:67032 IMAGE:6817440), complete cds Length = 2007 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 ttcctcctcctcctcgccgcc 86 ||||||||||||||||||||| Sbjct: 427 ttcctcctcctcctcgccgcc 407
>gb|AC113518.9| Mus musculus chromosome 1, clone RP23-477L7, complete sequence Length = 194281 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 35177 gtacgtacgtacgtacgtatg 35197 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 35337 gtacgtacgtacgtacgtatg 35357
>gb|DQ394071.1| Zea mays non-functional purple plant 1 transcription factor (PL1) gene, PL1(ems9703) allele, partial cds Length = 530 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 485 gtacgtacgtacgtacgtatg 465
>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete sequence Length = 164236 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 tcctcctcctcctcgccgcca 87 ||||||||||||||||||||| Sbjct: 54478 tcctcctcctcctcgccgcca 54498
>gb|DQ379501.1| Zea mays PL1 transcription factor (pl1) gene, pl1-Rhoades (gamma9601) allele, partial cds Length = 508 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 483 gtacgtacgtacgtacgtatg 463
>gb|DQ379500.1| Zea mays PL1 transcription factor (pl1) gene, pl1-Rhoades (mum9802) allele, partial cds Length = 529 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 488 gtacgtacgtacgtacgtatg 468
>gb|DQ379499.1| Zea mays PL1 transcription factor (pl1) gene, pl1-Rhoades (mum9515) allele, partial cds Length = 527 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 486 gtacgtacgtacgtacgtatg 466
>gb|AC116318.7| Mus musculus BAC clone RP23-80L14 from chromosome 1, complete sequence Length = 235490 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 76546 gtacgtacgtacgtacgtatg 76526 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 76706 gtacgtacgtacgtacgtatg 76686
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 791 cgccggccagccccgggcggcgagg 815 |||||||||||||| |||||||||| Sbjct: 3006630 cgccggccagccccaggcggcgagg 3006654
>dbj|AK158767.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K230334G01 product:neurogenic differentiation 2, full insert sequence Length = 2293 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 ttcctcctcctcctcgccgcc 86 ||||||||||||||||||||| Sbjct: 610 ttcctcctcctcctcgccgcc 590
>gb|AC113619.5| Drosophila melanogaster X BAC RP98-22D21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160001 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1406 tgggtgtacgtacgtacgtac 1426 ||||||||||||||||||||| Sbjct: 50359 tgggtgtacgtacgtacgtac 50379
>gb|AC023710.5| Drosophila melanogaster X BAC RP98-19D3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 189976 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1406 tgggtgtacgtacgtacgtac 1426 ||||||||||||||||||||| Sbjct: 35874 tgggtgtacgtacgtacgtac 35854
>emb|CT009533.6| Platypus DNA sequence from clone XX-522J9, complete sequence Length = 149919 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 cctcctcttcctctcctccaa 211 ||||||||||||||||||||| Sbjct: 82958 cctcctcttcctctcctccaa 82978
>emb|CR788308.9| Zebrafish DNA sequence from clone DKEY-192K19 in linkage group 3, complete sequence Length = 193615 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 201 ctctcctccaaggccgcctcc 221 ||||||||||||||||||||| Sbjct: 148382 ctctcctccaaggccgcctcc 148362
>gb|AC092749.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0023M11, from chromosome 10, complete sequence Length = 138668 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 81887 gtacgtacgtacgtacgtatg 81907
>gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0019D17, from chromosome 3, complete sequence Length = 129658 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 cctcctcctcctcgccgccac 88 ||||||||||||||||||||| Sbjct: 50707 cctcctcctcctcgccgccac 50727
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1410 tgtacgtacgtacgtacgtat 1430 ||||||||||||||||||||| Sbjct: 16517461 tgtacgtacgtacgtacgtat 16517441 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1410 tgtacgtacgtacgtacgtat 1430 ||||||||||||||||||||| Sbjct: 16517605 tgtacgtacgtacgtacgtat 16517585 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1410 tgtacgtacgtacgtacgtat 1430 ||||||||||||||||||||| Sbjct: 16521041 tgtacgtacgtacgtacgtat 16521021 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1410 tgtacgtacgtacgtacgtat 1430 ||||||||||||||||||||| Sbjct: 16521185 tgtacgtacgtacgtacgtat 16521165
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 10161666 gtacgtacgtacgtacgtatg 10161686 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 13941183 gtacgtacgtacgtacgtatg 13941163
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 ttcctcctcctcctcgccgcc 86 ||||||||||||||||||||| Sbjct: 2975889 ttcctcctcctcctcgccgcc 2975869
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 29115538 gtacgtacgtacgtacgtatg 29115518
>emb|Z69707.1|HSCE95B9 Human DNA sequence from clone LL22NC01-95B9 on chromosome 22, complete sequence Length = 30829 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 1468 gtacgtacgtacgtacgtatg 1448
>emb|AL589949.15| Human DNA sequence from clone RP11-169F1 on chromosome 10 Contains a CpG island, complete sequence Length = 153802 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 72410 gtacgtacgtacgtacgtatg 72390
>gb|L78814.1|MSGB1554CS Mycobacterium leprae cosmid B1554 DNA sequence Length = 36548 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1133 cggcggcgtcgacctggcgct 1153 ||||||||||||||||||||| Sbjct: 4414 cggcggcgtcgacctggcgct 4394
>gb|L78813.1|MSGB1551CS Mycobacterium leprae cosmid B1551 DNA sequence Length = 36548 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1133 cggcggcgtcgacctggcgct 1153 ||||||||||||||||||||| Sbjct: 4414 cggcggcgtcgacctggcgct 4394
>gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0078C05, complete sequence Length = 122116 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 24243 gtacgtacgtacgtacgtatg 24263
>dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456E05 Length = 173699 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 ttcctcctcctcctcgccgcc 86 ||||||||||||||||||||| Sbjct: 108555 ttcctcctcctcctcgccgcc 108575 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 ttcctcctcctcctcgccgcc 86 ||||||||||||||||||||| Sbjct: 108597 ttcctcctcctcctcgccgcc 108617
>emb|AL606624.4|OSJN00058 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011J08, complete sequence Length = 157734 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 25004 gtacgtacgtacgtacgtatg 24984
>emb|AL596447.16| Mouse DNA sequence from clone RP23-340N22 on chromosome 11 Contains the 5' end of the Tada2l gene for transcriptional adaptor 2 (ADA2 homolog, yeast)-like, a novel gene, the 5' end of the Acac gene for acetyl-Coenzyme A carboxylase and a CpG island, complete sequence Length = 114136 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 53471 gtacgtacgtacgtacgtatg 53451
>gb|AC154799.3| Mus musculus BAC clone RP23-79K21 from chromosome 13, complete sequence Length = 206997 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 156546 gtacgtacgtacgtacgtatg 156526 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 156531 gtacgtacgtacgtacgtatg 156551
>gb|AY899214.1| Streptomyces aizunensis strain NRRL B-11277 glycosyltransferase, polyketide synthase type Is, acyl transferase, membrane protein, ABC transporter, sugar dehydratase/epimerase, sugar epimerase, sugar nucleotidyltransferase, sugar dehydratase/epimerase, thioesterase, acyl CoA ligase, amine oxidase, phosphopantetheinyl transferase, transcriptional regulator, carboxylase/carboxyltransferase, amidinohydrolase, amide synthetase, 5-aminolevulinate synthase, and acyl CoA ligase genes, complete cds; and unknown gene Length = 161719 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 954 gtcgactccggcacggtcatc 974 ||||||||||||||||||||| Sbjct: 53904 gtcgactccggcacggtcatc 53924
>emb|CR388021.9| Zebrafish DNA sequence from clone CH211-189L17 in linkage group 5, complete sequence Length = 150805 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 54842 gtacgtacgtacgtacgtatg 54862
>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0501G04 Length = 156603 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 213 gccgcctccaccggcgtcacctccg 237 ||||||||| ||||||||||||||| Sbjct: 42290 gccgcctccgccggcgtcacctccg 42314
>dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1311_H06 Length = 139868 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 tttcctcctcctcctcgccgc 85 ||||||||||||||||||||| Sbjct: 138099 tttcctcctcctcctcgccgc 138079
>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1038_A06 Length = 147836 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 tttcctcctcctcctcgccgc 85 ||||||||||||||||||||| Sbjct: 82257 tttcctcctcctcctcgccgc 82237
>gb|AF315587.1|AF315587 Zea mays truncated PL protein (Pl) gene, pl-0 allele, complete cds Length = 1891 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 1160 gtacgtacgtacgtacgtatg 1140
>gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genomic sequence, complete sequence Length = 129302 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 tcctcctcctcctcgccgcca 87 ||||||||||||||||||||| Sbjct: 46572 tcctcctcctcctcgccgcca 46552
>gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genomic sequence, complete sequence Length = 133846 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 33643 gtacgtacgtacgtacgtatg 33623
>dbj|AP003564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062J13 Length = 152837 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 726 gtcttctcctactgcctcccg 746 ||||||||||||||||||||| Sbjct: 126336 gtcttctcctactgcctcccg 126316
>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0660D08 Length = 146915 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 726 gtcttctcctactgcctcccg 746 ||||||||||||||||||||| Sbjct: 39686 gtcttctcctactgcctcccg 39666
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1088 cgaggtggcggccgggggcgcgccg 1112 |||||||||||||||| |||||||| Sbjct: 4948717 cgaggtggcggccgggcgcgcgccg 4948693
>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0654B04 Length = 156907 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 722 cggcgtcttctcctactgcct 742 ||||||||||||||||||||| Sbjct: 8992 cggcgtcttctcctactgcct 9012
>dbj|AP004040.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_D06 Length = 112768 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 722 cggcgtcttctcctactgcct 742 ||||||||||||||||||||| Sbjct: 65681 cggcgtcttctcctactgcct 65701
>dbj|AP004038.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_H01 Length = 121377 Score = 42.1 bits (21), Expect = 5.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 68 cctcctcctcctcgccgccacagtcgccgcggccgccgacc 108 ||||||||||||||||||| | | |||||| |||| ||||| Sbjct: 38124 cctcctcctcctcgccgcccccgccgccgccgccggcgacc 38164
>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0033D24 Length = 186132 Score = 42.1 bits (21), Expect = 5.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 68 cctcctcctcctcgccgccacagtcgccg 96 ||||||||||||||||||| ||| ||||| Sbjct: 132705 cctcctcctcctcgccgccgcagccgccg 132733
>dbj|AP006158.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1127C04 Length = 121441 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1409 gtgtacgtacgtacgtacgta 1429 ||||||||||||||||||||| Sbjct: 30773 gtgtacgtacgtacgtacgta 30753
>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665C04 Length = 177054 Score = 42.1 bits (21), Expect = 5.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 68 cctcctcctcctcgccgccacagtcgccg 96 ||||||||||||||||||| ||| ||||| Sbjct: 52153 cctcctcctcctcgccgccgcagccgccg 52181
>dbj|AP005697.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0005C03 Length = 166423 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1409 gtgtacgtacgtacgtacgta 1429 ||||||||||||||||||||| Sbjct: 138118 gtgtacgtacgtacgtacgta 138098
>emb|AL929297.10| Zebrafish DNA sequence from clone DKEY-21K4 in linkage group 5, complete sequence Length = 104074 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 2200 gtacgtacgtacgtacgtatg 2180
>dbj|AK110218.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-D08, full insert sequence Length = 3457 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 gcggctttcctcctcctcctc 80 ||||||||||||||||||||| Sbjct: 2193 gcggctttcctcctcctcctc 2173
>dbj|AK107963.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-C11, full insert sequence Length = 743 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 tttcctcctcctcctcgccgc 85 ||||||||||||||||||||| Sbjct: 322 tttcctcctcctcctcgccgc 302
>dbj|AK104685.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C01, full insert sequence Length = 1886 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 726 gtcttctcctactgcctcccg 746 ||||||||||||||||||||| Sbjct: 987 gtcttctcctactgcctcccg 1007
>dbj|AK099722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088K05, full insert sequence Length = 1892 Score = 42.1 bits (21), Expect = 5.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 68 cctcctcctcctcgccgccacagtcgccg 96 ||||||||||||||||||| ||| ||||| Sbjct: 511 cctcctcctcctcgccgccgcagccgccg 483
>dbj|AK073200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023K10, full insert sequence Length = 2533 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 213 gccgcctccaccggcgtcacctccg 237 ||||||||| ||||||||||||||| Sbjct: 193 gccgcctccgccggcgtcacctccg 169
>dbj|AK066720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013087E11, full insert sequence Length = 1927 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 tcctcctcctcctcgccgcca 87 ||||||||||||||||||||| Sbjct: 283 tcctcctcctcctcgccgcca 263
>dbj|AK066409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067G18, full insert sequence Length = 1900 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 726 gtcttctcctactgcctcccg 746 ||||||||||||||||||||| Sbjct: 979 gtcttctcctactgcctcccg 999
>dbj|AK063102.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-C10, full insert sequence Length = 838 Score = 42.1 bits (21), Expect = 5.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 68 cctcctcctcctcgccgccacagtcgccgcggccgccgacc 108 ||||||||||||||||||| | | |||||| |||| ||||| Sbjct: 23 cctcctcctcctcgccgcccccgccgccgccgccggcgacc 63
>ref|XM_321044.2| Anopheles gambiae str. PEST ENSANGP00000007849 (ENSANGG00000005918), partial mRNA Length = 2490 Score = 42.1 bits (21), Expect = 5.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 217 cctccaccggcgtcacctccgcgcc 241 ||||| ||||||||||||||||||| Sbjct: 2074 cctcctccggcgtcacctccgcgcc 2050
>gb|AC154719.2| Mus musculus BAC clone RP24-370O15 from 16, complete sequence Length = 163408 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1410 tgtacgtacgtacgtacgtat 1430 ||||||||||||||||||||| Sbjct: 52548 tgtacgtacgtacgtacgtat 52528
>gb|AC174760.1| Gasterosteus aculeatus clone VMRC26-231C14, complete sequence Length = 76197 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 tcctcctcctcctcgccgcca 87 ||||||||||||||||||||| Sbjct: 60348 tcctcctcctcctcgccgcca 60368
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 cctcctcctcctcgccgccac 88 ||||||||||||||||||||| Sbjct: 1554558 cctcctcctcctcgccgccac 1554578
>emb|AL954341.14| Mouse DNA sequence from clone RP23-213D14 on chromosome 2, complete sequence Length = 178273 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 39296 gtacgtacgtacgtacgtatg 39276
>ref|NM_010895.2| Mus musculus neurogenic differentiation 2 (Neurod2), mRNA gb|U58471.1|MMU58471 Mus musculus NeuroD2 mRNA, complete cds Length = 1954 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 ttcctcctcctcctcgccgcc 86 ||||||||||||||||||||| Sbjct: 490 ttcctcctcctcctcgccgcc 470
>emb|AL831812.5|CNS08CAP Oryza sativa chromosome 12, . BAC OSJNBa0054H15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155947 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1410 tgtacgtacgtacgtacgtat 1430 ||||||||||||||||||||| Sbjct: 52605 tgtacgtacgtacgtacgtat 52625 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1410 tgtacgtacgtacgtacgtat 1430 ||||||||||||||||||||| Sbjct: 52749 tgtacgtacgtacgtacgtat 52769 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1410 tgtacgtacgtacgtacgtat 1430 ||||||||||||||||||||| Sbjct: 56185 tgtacgtacgtacgtacgtat 56205 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1410 tgtacgtacgtacgtacgtat 1430 ||||||||||||||||||||| Sbjct: 56329 tgtacgtacgtacgtacgtat 56349
>gb|AC117209.3| Mus musculus BAC clone RP23-281E24 from 10, complete sequence Length = 195911 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 151930 gtacgtacgtacgtacgtatg 151910
>emb|AL591390.8| Mouse DNA sequence from clone RP23-355L10 on chromosome 11, complete sequence Length = 186134 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 ttcctcctcctcctcgccgcc 86 ||||||||||||||||||||| Sbjct: 177493 ttcctcctcctcctcgccgcc 177473
>dbj|D83507.1|MUSNDRF Mouse mRNA for NeuroD-related factor (NDRF), complete cds Length = 1831 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 ttcctcctcctcctcgccgcc 86 ||||||||||||||||||||| Sbjct: 294 ttcctcctcctcctcgccgcc 274
>ref|NM_019326.1| Rattus norvegicus neurogenic differentiation 2 (Neurod2), mRNA dbj|D82868.1|RAT4 Rattus norvegicus mRNA for bHLH protein, complete cds Length = 1843 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 ttcctcctcctcctcgccgcc 86 ||||||||||||||||||||| Sbjct: 286 ttcctcctcctcctcgccgcc 266
>dbj|AB027126.1| Mus musculus NDRF gene for neuro D-related factor, complete cds Length = 4910 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 ttcctcctcctcctcgccgcc 86 ||||||||||||||||||||| Sbjct: 3214 ttcctcctcctcctcgccgcc 3194
>gb|L13454.1|MZEPLBH Zea mays Pl-Bh (Blotched1) gene, complete cds Length = 3587 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 1872 gtacgtacgtacgtacgtatg 1852
>gb|L19494.1|MZEPLTANSA Zea mays PL transcriptional activator gene, complete cds Length = 4439 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 1276 gtacgtacgtacgtacgtatg 1256
>gb|L19496.1|MZETRACTB Zea mays transcriptional activator for anthocyanin synthesis gene, complete cds Length = 1893 Score = 42.1 bits (21), Expect = 5.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1411 gtacgtacgtacgtacgtatg 1431 ||||||||||||||||||||| Sbjct: 1167 gtacgtacgtacgtacgtatg 1147 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 188,251,521 Number of extensions: 11487212 Number of successful extensions: 668237 Number of sequences better than 10.0: 195 Number of HSP's gapped: 668143 Number of HSP's successfully gapped: 272 Length of query: 1508 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1485 Effective length of database: 18,503,978,556 Effective search space: 27478408155660 Effective search space used: 27478408155660 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
