Clone Name | FLbaf92g02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AK100006:Os04g0645600 | 553 | e-157 | 2 | AK104993:Os06g0681700 | 75 | 2e-13 | 3 | Os07g0453000:Os07g0453000 | 33 | 0.75 | 4 | Os06g0280500:Os06g0280500 | 30 | 4.9 | 5 | AK107047:Os02g0265100 | 30 | 4.9 | 6 | AK066318:Os10g0415800 | 30 | 6.4 | 7 | Os05g0126500:Os05g0126500 | 30 | 8.3 | 8 | Os03g0432200:Os03g0432200 | 30 | 8.3 | 9 | AK120700:Os03g0370900 | 30 | 8.3 | 10 | AK101513:Os03g0370900 | 30 | 8.3 |
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>AK100006:Os04g0645600 | Length = 396 Score = 553 bits (1426), Expect = e-157 Identities = 296/395 (74%), Positives = 311/395 (78%) Frame = +3 Query: 561 NLKYRAGXXXXXXXXXXXXTSAEVTQGIFASYKQPFAITYLGASLMVIYIPLAFLKDFIY 740 NLKYRAG TSAEVTQGIF YKQPFAITYLGASLM+IYIPL+FLKDFI Sbjct: 4 NLKYRAGLVLIVAVVLIWVTSAEVTQGIFTKYKQPFAITYLGASLMIIYIPLSFLKDFIC 63 Query: 741 KLLRGHXXXXXXXXXXXXXXXXXXXPVKNGEFQKMLEMEPQKTVVIKITDVDLPVLEETK 920 LLR P+KNGEFQKMLEME QKT+VI TDVD+PV+EETK Sbjct: 64 NLLRRSSSSSRVSKVTNKSSFGGCAPLKNGEFQKMLEMESQKTIVINYTDVDIPVIEETK 123 Query: 921 PLICGIGECEGDVLKEQQLSTKEIAIYGLYLCPIWFVTEYLSNAALARXXXXXXXXXXXX 1100 PLICGI E + DVLKEQ+LSTKEIA+YGLYLCPIWFVTEYLSNAALAR Sbjct: 124 PLICGITEFD-DVLKEQELSTKEIAMYGLYLCPIWFVTEYLSNAALARTSVASTTVLSST 182 Query: 1101 XXXXXXXIGVLLGQDSINAAKVIAVFVSMAGVAMTTMGQTWATDESEVSNSGATQRTLLG 1280 IGVLLGQDSINAAKVIAVF+SMAGV MTTMGQTWA+DESE+SNSGATQRTLLG Sbjct: 183 SGLFTLFIGVLLGQDSINAAKVIAVFISMAGVVMTTMGQTWASDESEISNSGATQRTLLG 242 Query: 1281 DMFGLMSAMSYGLFTVLLKKFAGGEGSEKVDVQKXXXXXXXXXXXXXXXXVWPLTALGIE 1460 DMFGL+SAMSYGLFTVLLKKFAG EG EKVDVQK VWPLTALGIE Sbjct: 243 DMFGLLSAMSYGLFTVLLKKFAGEEG-EKVDVQKLFGYLGLFSLVLLWWLVWPLTALGIE 301 Query: 1461 PKFTMPHSAKVDEVVLANGLIGSVLSDYFWALSVVWTNPLVATLGMSLTIPLAMVADMVI 1640 PKFT+PHSAKVDEVVLANGLIGSVLSDYFWALSVVWT PLVATLGMSLTIPLAMVADM+I Sbjct: 302 PKFTIPHSAKVDEVVLANGLIGSVLSDYFWALSVVWTTPLVATLGMSLTIPLAMVADMII 361 Query: 1641 HGRHYSAVYIFGSVQVFSGFVIANLADRVSRFLGL 1745 HGR YSAVYIFGSVQVFSGFVIANLADR SRFLGL Sbjct: 362 HGRRYSAVYIFGSVQVFSGFVIANLADRFSRFLGL 396
>AK104993:Os06g0681700 | Length = 450 Score = 75.1 bits (183), Expect = 2e-13 Identities = 75/370 (20%), Positives = 144/370 (38%), Gaps = 8/370 (2%) Frame = +3 Query: 630 VTQGIFASYKQPFAITYLGASLMVIYIPLAFLKDFIYKLLRGHXXXXXXXXXXXXXXXXX 809 + Q + PF ITY+ SL VIYIP+ + + Sbjct: 45 IVQSVVDEGVSPFLITYICNSLFVIYIPIVEAARYFEDSINNFWTKLKGKDVADLEQSAD 104 Query: 810 XXPVK--NGEFQKMLEMEPQKTVVIKITDVDLPVLEETKPLICGIGECEGD--VLKEQQL 977 + +G Q+ P + D+ E P+ + +G + + + Sbjct: 105 LESINLLHGSEQEGNTASPTRL------PEDILASEAVFPVQAELNVADGSKGLDAKGRW 158 Query: 978 STKEIAIYGLYLCPIWFVTEYLSNAALARXXXXXXXXXXXXXXXXXXXIGVLLGQDSINA 1157 + +A + +CP WF+ + N +L + ++ ++ Sbjct: 159 TRARVARVSMVVCPFWFLAQLTFNLSLRYTTVTSNTILSSTSSLFTFLVALVFLGETFTW 218 Query: 1158 AKVIAVFVSMAGVAMTTMGQTWATDESEVSNSGATQRTLLGDMFGLMSAMSYGLFTVLLK 1337 K+I+V + M G + ++ + +T + +N LLGD+ ++SA Y ++ L++ Sbjct: 219 LKLISVLLCMGGTIIVSLADSGSTANTIATNP------LLGDVLSIVSAGLYAVYITLIR 272 Query: 1338 KFAGGE--GSEKVDVQKXXXXXXXXXXXXXXXXVWPLTALGIEPKFTMPHSAKVDEV--V 1505 K E G +V + + L +EP H ++V + Sbjct: 273 KKLPDEKEGQGEVSMAQFLGFLGLFNMLFFFPFALFLNFTKLEPF----HRLTWEQVGLI 328 Query: 1506 LANGLIGSVLSDYFWALSVVWTNPLVATLGMSLTIPLAMVADMVIHGRHYSAVYIFGSVQ 1685 + GL+ +VLSDY WA +++ T VAT G+++ +P+A + D + + YI G+ Sbjct: 329 VGKGLLDNVLSDYLWAKAILLTTTTVATAGLTIQVPIAAIVDTLTGHAPHLLDYI-GAAA 387 Query: 1686 VFSGFVIANL 1715 V GF N+ Sbjct: 388 VLVGFAGINI 397
>Os07g0453000:Os07g0453000 | Length = 1079 Score = 33.1 bits (74), Expect = 0.75 Identities = 20/53 (37%), Positives = 25/53 (47%) Frame = +2 Query: 398 APTPTQSTASMWPGR*TPLPHSPRARGAVKLLASAAAPQQQERPIESRRHGHG 556 AP P Q T+ +P TP HSP A +S A+P +Q P S HG Sbjct: 485 APGPAQETSPTFPAPHTPPAHSPGASQG----SSPASPLRQASPAHSPGPAHG 533
>Os06g0280500:Os06g0280500 | Length = 1168 Score = 30.4 bits (67), Expect = 4.9 Identities = 24/65 (36%), Positives = 31/65 (47%) Frame = +2 Query: 392 PGAPTPTQSTASMWPGR*TPLPHSPRARGAVKLLASAAAPQQQERPIESRRHGHGSQSQV 571 P +P P+ S + PG PLP PR R + +A AAA P+ S GH + V Sbjct: 154 PKSPRPSPSLTPL-PG---PLP--PRRRRRRRQVAVAAARTSPPSPLPSPPPGHRRRQVV 207 Query: 572 PGWAR 586 P AR Sbjct: 208 PAVAR 212
>AK107047:Os02g0265100 | Length = 97 Score = 30.4 bits (67), Expect = 4.9 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = +2 Query: 392 PGAPTPTQSTASMWPGR*TPLP--HSPRARGAVKLLASAAAPQQQERPIESRRHGHGSQS 565 P P P ++A++W GR P P H PR R A+A A +++ R RR G+ Sbjct: 22 PPRPPPWTASAAVWSGR-APPPRLHHPRRRPPPPTAAAAGAARRRRR----RRRRKGA-- 74 Query: 566 QVPGWAR 586 GW R Sbjct: 75 -CCGWCR 80
>AK066318:Os10g0415800 | Length = 782 Score = 30.0 bits (66), Expect = 6.4 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +3 Query: 1926 GPVYTQEWIILVWWNRNSQSLAYV 1997 GP+YT EW + WN+ +AY+ Sbjct: 142 GPLYTDEWFHGISWNQEETLIAYI 165
>Os05g0126500:Os05g0126500 | Length = 293 Score = 29.6 bits (65), Expect = 8.3 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 3/35 (8%) Frame = -2 Query: 502 GGGEQFNR---AARAWGVGERSSPARPHACGGLGG 407 GGG+ R A R G G S P R CGG+GG Sbjct: 206 GGGDARRRVRQAVRGAGGGAESPPRRRGVCGGVGG 240
>Os03g0432200:Os03g0432200 | Length = 218 Score = 29.6 bits (65), Expect = 8.3 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Frame = -3 Query: 936 FHK*VALSLLVQEGPHQ*FLSPRFSVVPSPASSEIHHSSQE-RYRQRKICLRS-LRLC 769 FH + ++L E P+Q + + + S S +IH S +E R R R++ LRS +R C Sbjct: 115 FHLFMGIALSFDEAPNQIHILMQSIISSSIGSLQIHRSMEEVRRRWREVVLRSQVRAC 172
>AK120700:Os03g0370900 | Length = 518 Score = 29.6 bits (65), Expect = 8.3 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +2 Query: 1676 LCPGIFWVRHRQSCRPRLTFLRPIVVVKCTRSNRSVHLEGWIE 1804 L G WVRHR+ P T + V+ K S ++GW++ Sbjct: 142 LVEGADWVRHRRVLTPAFTMDKLKVMTKTMASCAECLIQGWLD 184
>AK101513:Os03g0370900 | Length = 518 Score = 29.6 bits (65), Expect = 8.3 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +2 Query: 1676 LCPGIFWVRHRQSCRPRLTFLRPIVVVKCTRSNRSVHLEGWIE 1804 L G WVRHR+ P T + V+ K S ++GW++ Sbjct: 142 LVEGADWVRHRRVLTPAFTMDKLKVMTKTMASCAECLIQGWLD 184 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 53,761,224 Number of extensions: 1195797 Number of successful extensions: 4115 Number of sequences better than 10.0: 10 Number of HSP's gapped: 4097 Number of HSP's successfully gapped: 10 Length of query: 672 Length of database: 15,399,855 Length adjustment: 107 Effective length of query: 565 Effective length of database: 11,115,468 Effective search space: 6280239420 Effective search space used: 6280239420 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)