ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf92g02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK100006:Os04g0645600 553 e-157
2AK104993:Os06g0681700 75 2e-13
3Os07g0453000:Os07g0453000 33 0.75
4Os06g0280500:Os06g0280500 30 4.9
5AK107047:Os02g0265100 30 4.9
6AK066318:Os10g0415800 30 6.4
7Os05g0126500:Os05g0126500 30 8.3
8Os03g0432200:Os03g0432200 30 8.3
9AK120700:Os03g0370900 30 8.3
10AK101513:Os03g0370900 30 8.3

>AK100006:Os04g0645600 |
          Length = 396
 Score =  553 bits (1426), Expect = e-157
 Identities = 296/395 (74%), Positives = 311/395 (78%)
 Frame = +3

Query: 561  NLKYRAGXXXXXXXXXXXXTSAEVTQGIFASYKQPFAITYLGASLMVIYIPLAFLKDFIY 740
            NLKYRAG            TSAEVTQGIF  YKQPFAITYLGASLM+IYIPL+FLKDFI 
Sbjct: 4    NLKYRAGLVLIVAVVLIWVTSAEVTQGIFTKYKQPFAITYLGASLMIIYIPLSFLKDFIC 63

Query: 741  KLLRGHXXXXXXXXXXXXXXXXXXXPVKNGEFQKMLEMEPQKTVVIKITDVDLPVLEETK 920
             LLR                     P+KNGEFQKMLEME QKT+VI  TDVD+PV+EETK
Sbjct: 64   NLLRRSSSSSRVSKVTNKSSFGGCAPLKNGEFQKMLEMESQKTIVINYTDVDIPVIEETK 123

Query: 921  PLICGIGECEGDVLKEQQLSTKEIAIYGLYLCPIWFVTEYLSNAALARXXXXXXXXXXXX 1100
            PLICGI E + DVLKEQ+LSTKEIA+YGLYLCPIWFVTEYLSNAALAR            
Sbjct: 124  PLICGITEFD-DVLKEQELSTKEIAMYGLYLCPIWFVTEYLSNAALARTSVASTTVLSST 182

Query: 1101 XXXXXXXIGVLLGQDSINAAKVIAVFVSMAGVAMTTMGQTWATDESEVSNSGATQRTLLG 1280
                   IGVLLGQDSINAAKVIAVF+SMAGV MTTMGQTWA+DESE+SNSGATQRTLLG
Sbjct: 183  SGLFTLFIGVLLGQDSINAAKVIAVFISMAGVVMTTMGQTWASDESEISNSGATQRTLLG 242

Query: 1281 DMFGLMSAMSYGLFTVLLKKFAGGEGSEKVDVQKXXXXXXXXXXXXXXXXVWPLTALGIE 1460
            DMFGL+SAMSYGLFTVLLKKFAG EG EKVDVQK                VWPLTALGIE
Sbjct: 243  DMFGLLSAMSYGLFTVLLKKFAGEEG-EKVDVQKLFGYLGLFSLVLLWWLVWPLTALGIE 301

Query: 1461 PKFTMPHSAKVDEVVLANGLIGSVLSDYFWALSVVWTNPLVATLGMSLTIPLAMVADMVI 1640
            PKFT+PHSAKVDEVVLANGLIGSVLSDYFWALSVVWT PLVATLGMSLTIPLAMVADM+I
Sbjct: 302  PKFTIPHSAKVDEVVLANGLIGSVLSDYFWALSVVWTTPLVATLGMSLTIPLAMVADMII 361

Query: 1641 HGRHYSAVYIFGSVQVFSGFVIANLADRVSRFLGL 1745
            HGR YSAVYIFGSVQVFSGFVIANLADR SRFLGL
Sbjct: 362  HGRRYSAVYIFGSVQVFSGFVIANLADRFSRFLGL 396



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>AK104993:Os06g0681700 |
          Length = 450

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 75/370 (20%), Positives = 144/370 (38%), Gaps = 8/370 (2%)
 Frame = +3

Query: 630  VTQGIFASYKQPFAITYLGASLMVIYIPLAFLKDFIYKLLRGHXXXXXXXXXXXXXXXXX 809
            + Q +      PF ITY+  SL VIYIP+     +    +                    
Sbjct: 45   IVQSVVDEGVSPFLITYICNSLFVIYIPIVEAARYFEDSINNFWTKLKGKDVADLEQSAD 104

Query: 810  XXPVK--NGEFQKMLEMEPQKTVVIKITDVDLPVLEETKPLICGIGECEGD--VLKEQQL 977
               +   +G  Q+     P +         D+   E   P+   +   +G   +  + + 
Sbjct: 105  LESINLLHGSEQEGNTASPTRL------PEDILASEAVFPVQAELNVADGSKGLDAKGRW 158

Query: 978  STKEIAIYGLYLCPIWFVTEYLSNAALARXXXXXXXXXXXXXXXXXXXIGVLLGQDSINA 1157
            +   +A   + +CP WF+ +   N +L                     + ++   ++   
Sbjct: 159  TRARVARVSMVVCPFWFLAQLTFNLSLRYTTVTSNTILSSTSSLFTFLVALVFLGETFTW 218

Query: 1158 AKVIAVFVSMAGVAMTTMGQTWATDESEVSNSGATQRTLLGDMFGLMSAMSYGLFTVLLK 1337
             K+I+V + M G  + ++  + +T  +  +N       LLGD+  ++SA  Y ++  L++
Sbjct: 219  LKLISVLLCMGGTIIVSLADSGSTANTIATNP------LLGDVLSIVSAGLYAVYITLIR 272

Query: 1338 KFAGGE--GSEKVDVQKXXXXXXXXXXXXXXXXVWPLTALGIEPKFTMPHSAKVDEV--V 1505
            K    E  G  +V + +                   L    +EP     H    ++V  +
Sbjct: 273  KKLPDEKEGQGEVSMAQFLGFLGLFNMLFFFPFALFLNFTKLEPF----HRLTWEQVGLI 328

Query: 1506 LANGLIGSVLSDYFWALSVVWTNPLVATLGMSLTIPLAMVADMVIHGRHYSAVYIFGSVQ 1685
            +  GL+ +VLSDY WA +++ T   VAT G+++ +P+A + D +     +   YI G+  
Sbjct: 329  VGKGLLDNVLSDYLWAKAILLTTTTVATAGLTIQVPIAAIVDTLTGHAPHLLDYI-GAAA 387

Query: 1686 VFSGFVIANL 1715
            V  GF   N+
Sbjct: 388  VLVGFAGINI 397



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>Os07g0453000:Os07g0453000 |
          Length = 1079

 Score = 33.1 bits (74), Expect = 0.75
 Identities = 20/53 (37%), Positives = 25/53 (47%)
 Frame = +2

Query: 398 APTPTQSTASMWPGR*TPLPHSPRARGAVKLLASAAAPQQQERPIESRRHGHG 556
           AP P Q T+  +P   TP  HSP A       +S A+P +Q  P  S    HG
Sbjct: 485 APGPAQETSPTFPAPHTPPAHSPGASQG----SSPASPLRQASPAHSPGPAHG 533



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>Os06g0280500:Os06g0280500 |
          Length = 1168

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 24/65 (36%), Positives = 31/65 (47%)
 Frame = +2

Query: 392 PGAPTPTQSTASMWPGR*TPLPHSPRARGAVKLLASAAAPQQQERPIESRRHGHGSQSQV 571
           P +P P+ S   + PG   PLP  PR R   + +A AAA      P+ S   GH  +  V
Sbjct: 154 PKSPRPSPSLTPL-PG---PLP--PRRRRRRRQVAVAAARTSPPSPLPSPPPGHRRRQVV 207

Query: 572 PGWAR 586
           P  AR
Sbjct: 208 PAVAR 212



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>AK107047:Os02g0265100 |
          Length = 97

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = +2

Query: 392 PGAPTPTQSTASMWPGR*TPLP--HSPRARGAVKLLASAAAPQQQERPIESRRHGHGSQS 565
           P  P P  ++A++W GR  P P  H PR R      A+A A +++ R    RR   G+  
Sbjct: 22  PPRPPPWTASAAVWSGR-APPPRLHHPRRRPPPPTAAAAGAARRRRR----RRRRKGA-- 74

Query: 566 QVPGWAR 586
              GW R
Sbjct: 75  -CCGWCR 80



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>AK066318:Os10g0415800 |
          Length = 782

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 1926 GPVYTQEWIILVWWNRNSQSLAYV 1997
            GP+YT EW   + WN+    +AY+
Sbjct: 142  GPLYTDEWFHGISWNQEETLIAYI 165



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>Os05g0126500:Os05g0126500 |
          Length = 293

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = -2

Query: 502 GGGEQFNR---AARAWGVGERSSPARPHACGGLGG 407
           GGG+   R   A R  G G  S P R   CGG+GG
Sbjct: 206 GGGDARRRVRQAVRGAGGGAESPPRRRGVCGGVGG 240



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>Os03g0432200:Os03g0432200 |
          Length = 218

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = -3

Query: 936 FHK*VALSLLVQEGPHQ*FLSPRFSVVPSPASSEIHHSSQE-RYRQRKICLRS-LRLC 769
           FH  + ++L   E P+Q  +  +  +  S  S +IH S +E R R R++ LRS +R C
Sbjct: 115 FHLFMGIALSFDEAPNQIHILMQSIISSSIGSLQIHRSMEEVRRRWREVVLRSQVRAC 172



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>AK120700:Os03g0370900 |
          Length = 518

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +2

Query: 1676 LCPGIFWVRHRQSCRPRLTFLRPIVVVKCTRSNRSVHLEGWIE 1804
            L  G  WVRHR+   P  T  +  V+ K   S     ++GW++
Sbjct: 142  LVEGADWVRHRRVLTPAFTMDKLKVMTKTMASCAECLIQGWLD 184



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>AK101513:Os03g0370900 |
          Length = 518

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +2

Query: 1676 LCPGIFWVRHRQSCRPRLTFLRPIVVVKCTRSNRSVHLEGWIE 1804
            L  G  WVRHR+   P  T  +  V+ K   S     ++GW++
Sbjct: 142  LVEGADWVRHRRVLTPAFTMDKLKVMTKTMASCAECLIQGWLD 184


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 53,761,224
Number of extensions: 1195797
Number of successful extensions: 4115
Number of sequences better than 10.0: 10
Number of HSP's gapped: 4097
Number of HSP's successfully gapped: 10
Length of query: 672
Length of database: 15,399,855
Length adjustment: 107
Effective length of query: 565
Effective length of database: 11,115,468
Effective search space: 6280239420
Effective search space used: 6280239420
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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