ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf92g02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001060601.1| Oryza sativa (japonica cultivar-group) Os04g0645600 (Os04g0645600) mRNA, complete cds Length = 1738 Score = 946 bits (477), Expect = 0.0 Identities = 829/945 (87%), Gaps = 6/945 (0%) Strand = Plus / Plus Query: 791 caaatcttcctttggcggtagcgctcctgtgaagaatggtgaatttcagaagatgctgga 850 ||||||||| || || ||| | |||||| |||||||||||||||| ||||||||| |||| Sbjct: 518 caaatcttctttcggtggttgtgctcctctgaagaatggtgaattccagaagatgttgga 577 Query: 851 gatggaaccacagaaaaccgtggtgataaaaattactgatgtggaccttcctgtactaga 910 |||||| | || ||||| | || ||||| |||||||||||| |||||||| |||| Sbjct: 578 aatggaatctcaaaaaactatagtcataaactatactgatgtggatattcctgtaataga 637 Query: 911 agagacaaagccacttatttgtggaattggtgaatgtgagggtgatgttttgaaggagca 970 ||||||||| || ||||| |||||||| ||||| || ||| |||||||||||||| Sbjct: 638 agagacaaaacctcttatatgtggaatcactgaattcga---tgacgttttgaaggagca 694 Query: 971 acagctttccactaaggagattgcaatttacggactgtatctttgtcccatatggtttgt 1030 | | ||||||||||||||||||||||| || || ||||||||||||||||||||||||| Sbjct: 695 agaactttccactaaggagattgcaatgtatgggttgtatctttgtcccatatggtttgt 754 Query: 1031 tacagagtatttgtcaaatgcagcacttgcaagaactagtgtggcaagcactactgtact 1090 || ||||| ||||||||||| |||||||||||||||||||| || || ||||||||||| Sbjct: 755 gacggagtacttgtcaaatgcggcacttgcaagaactagtgttgctagtactactgtact 814 Query: 1091 atcttcaacttcgggactcttcacccttttcattggtgtgctacttggccaagactccat 1150 ||||||||| || ||||||||||| ||||||||||||||||||||||||||||| || || Sbjct: 815 atcttcaacgtcaggactcttcactcttttcattggtgtgctacttggccaagattctat 874 Query: 1151 aaatgctgccaaagttattgccgtttttgttagtatggctggtgtggcaatgacaactat 1210 ||||||||| ||||||||||| |||||| |||| ||||||||||||| ||||||||| || Sbjct: 875 aaatgctgcaaaagttattgctgtttttattagcatggctggtgtggtaatgacaaccat 934 Query: 1211 gggccagacttgggcaacagatgaatcagaagtaagcaattcaggggccacacagaggac 1270 ||| |||||||||||| |||||||||||||| | |||||||| || ||||| ||||| || Sbjct: 935 ggggcagacttgggcatcagatgaatcagaaatcagcaattctggtgccactcagagaac 994 Query: 1271 tcttctaggtgatatgtttggtcttatgtcagctatgtcatatggtctattcactgtgct 1330 |||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 995 tcttctaggtgacatgtttggtcttctgtcagctatgtcatatggtttattcactgtgct 1054 Query: 1331 tctcaaaaagtttgctggaggagaaggatcagaaaaggttgatgtccaaaaactgtttgg 1390 ||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 1055 tctaaaaaagtttgctggagaggaagg---agaaaaggttgatgtccaaaaactgtttgg 1111 Query: 1391 ttttctcggacttttcagtctttgtcttctctggtggcttgtctggccattaactgcact 1450 | |||||||||||||||||| ||||||||||||||||||||||||||| || ||| | Sbjct: 1112 ctacctcggacttttcagtcttgttcttctctggtggcttgtctggccattgaccgcatt 1171 Query: 1451 tggcattgagccaaagtttacaatgccccactcagctaaagtggatgaagtggtgctggc 1510 |||||||| |||||||||||||| ||||||||||| |||||||||||||||||| |||| Sbjct: 1172 aggcattgaaccaaagtttacaataccccactcagccaaagtggatgaagtggtgttggc 1231 Query: 1511 aaacggcctcattggaagtgtgctatctgactacttctgggctctttctgttgtttggac 1570 ||| ||||| ||||||||||| | || |||||||||||||||||||||||||||||||| Sbjct: 1232 aaatggccttattggaagtgtattgtcagactacttctgggctctttctgttgtttggac 1291 Query: 1571 taatcccttggtggccacgttaggcatgtcactcacaattccactagcaatggttgctga 1630 || ||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||| Sbjct: 1292 tactcctttggtggccaccttgggcatgtcactcacaattccactagcaatggtggctga 1351 Query: 1631 catggtcatccacggtcgacattattcagcagtctacatttttggctctgtccaggtatt 1690 ||| |||| || ||||| | ||||||||| ||||| || ||||| |||||||||||||| Sbjct: 1352 tatgatcattcatggtcgtcgttattcagcggtctatatctttggttctgtccaggtatt 1411 Query: 1691 ttctgggttcgtcatcgccaatcttgccgaccgcgtctcacgttt 1735 ||||||||| ||||| || |||||||| || ||| | |||||||| Sbjct: 1412 ttctgggtttgtcattgcaaatcttgcggatcgcttttcacgttt 1456 Score = 210 bits (106), Expect = 1e-50 Identities = 172/194 (88%) Strand = Plus / Plus Query: 559 ccaatctcaagtaccgggctgggctcgtcctcatcgtcgccgtcgtgctcatatgggtca 618 |||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 286 ccaatctcaagtaccgtgctggcctcgtcctcatcgtcgccgtggtgctcatatgggtca 345 Query: 619 cctccgccgaggtcacgcaggggatattcgctagctacaagcaaccgttcgcaattactt 678 ||||||| ||||||||||||||||||||| ||| ||||||||||| || |||||||||| Sbjct: 346 cctccgcggaggtcacgcaggggatattcactaaatacaagcaaccctttgcaattactt 405 Query: 679 acttgggggcctcccttatggtcatctacatcccgttggcatttctaaaggatttcatat 738 || ||||||||||||||||| ||||||| || || | ||||| |||||||||| |||| Sbjct: 406 acctgggggcctcccttatgatcatctatatacctctttcatttttaaaggattttatat 465 Query: 739 acaaattgttgaga 752 || ||||||||| Sbjct: 466 gtaatttgttgaga 479
>dbj|AK100006.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135P10, full insert sequence Length = 1740 Score = 938 bits (473), Expect = 0.0 Identities = 828/945 (87%), Gaps = 6/945 (0%) Strand = Plus / Plus Query: 791 caaatcttcctttggcggtagcgctcctgtgaagaatggtgaatttcagaagatgctgga 850 ||||||||| || || ||| | |||||| |||||||||||||||| ||||||||| |||| Sbjct: 518 caaatcttctttcggtggttgtgctcctctgaagaatggtgaattccagaagatgttgga 577 Query: 851 gatggaaccacagaaaaccgtggtgataaaaattactgatgtggaccttcctgtactaga 910 |||||| | || ||||| | || ||||| |||||||||||| |||||||| |||| Sbjct: 578 aatggaatctcaaaaaactatagtcataaactatactgatgtggatattcctgtaataga 637 Query: 911 agagacaaagccacttatttgtggaattggtgaatgtgagggtgatgttttgaaggagca 970 ||||||||| || ||||| |||||||| ||||| || ||| |||||||||||||| Sbjct: 638 agagacaaaacctcttatatgtggaatcactgaattcga---tgacgttttgaaggagca 694 Query: 971 acagctttccactaaggagattgcaatttacggactgtatctttgtcccatatggtttgt 1030 | | ||||||||||||||||||||||| || || ||||||||||||||||||||||||| Sbjct: 695 agaactttccactaaggagattgcaatgtatgggttgtatctttgtcccatatggtttgt 754 Query: 1031 tacagagtatttgtcaaatgcagcacttgcaagaactagtgtggcaagcactactgtact 1090 || ||||| ||||||||||| |||||||||||||||||||| || || ||||||||||| Sbjct: 755 gacggagtacttgtcaaatgcggcacttgcaagaactagtgttgctagtactactgtact 814 Query: 1091 atcttcaacttcgggactcttcacccttttcattggtgtgctacttggccaagactccat 1150 ||||||||| || ||||||||||| ||||||||||||||||||||||||||||| || || Sbjct: 815 atcttcaacgtcaggactcttcactcttttcattggtgtgctacttggccaagattctat 874 Query: 1151 aaatgctgccaaagttattgccgtttttgttagtatggctggtgtggcaatgacaactat 1210 ||||||||| ||||||||||| |||||| |||| ||||||||||||| ||||||||| || Sbjct: 875 aaatgctgcaaaagttattgctgtttttattagcatggctggtgtggtaatgacaaccat 934 Query: 1211 gggccagacttgggcaacagatgaatcagaagtaagcaattcaggggccacacagaggac 1270 ||| |||||||||||| |||||||||||||| | |||||||| || ||||| ||||| || Sbjct: 935 ggggcagacttgggcatcagatgaatcagaaatcagcaattctggtgccactcagagaac 994 Query: 1271 tcttctaggtgatatgtttggtcttatgtcagctatgtcatatggtctattcactgtgct 1330 |||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 995 tcttctaggtgacatgtttggtcttctgtcagctatgtcatatggtttattcactgtgct 1054 Query: 1331 tctcaaaaagtttgctggaggagaaggatcagaaaaggttgatgtccaaaaactgtttgg 1390 ||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 1055 tctaaaaaagtttgctggagaggaagg---agaaaaggttgatgtccaaaaactgtttgg 1111 Query: 1391 ttttctcggacttttcagtctttgtcttctctggtggcttgtctggccattaactgcact 1450 | |||||||||||||| ||| ||||||||||||||||||||||||||| || ||| | Sbjct: 1112 ctacctcggacttttcagccttgttcttctctggtggcttgtctggccattgaccgcatt 1171 Query: 1451 tggcattgagccaaagtttacaatgccccactcagctaaagtggatgaagtggtgctggc 1510 |||||||| |||||||||||||| ||||||||||| |||||||||||||||||| |||| Sbjct: 1172 aggcattgaaccaaagtttacaataccccactcagccaaagtggatgaagtggtgttggc 1231 Query: 1511 aaacggcctcattggaagtgtgctatctgactacttctgggctctttctgttgtttggac 1570 ||| ||||| ||||||||||| | || |||||||||||||||||||||||||||||||| Sbjct: 1232 aaatggccttattggaagtgtattgtcagactacttctgggctctttctgttgtttggac 1291 Query: 1571 taatcccttggtggccacgttaggcatgtcactcacaattccactagcaatggttgctga 1630 || ||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||| Sbjct: 1292 tactcctttggtggccaccttgggcatgtcactcacaattccactagcaatggtggctga 1351 Query: 1631 catggtcatccacggtcgacattattcagcagtctacatttttggctctgtccaggtatt 1690 ||| |||| || ||||| | ||||||||| ||||| || ||||| |||||||||||||| Sbjct: 1352 tatgatcattcatggtcgtcgttattcagcggtctatatctttggttctgtccaggtatt 1411 Query: 1691 ttctgggttcgtcatcgccaatcttgccgaccgcgtctcacgttt 1735 ||||||||| ||||| || |||||||| || ||| | |||||||| Sbjct: 1412 ttctgggtttgtcattgcaaatcttgcggatcgcttttcacgttt 1456 Score = 210 bits (106), Expect = 1e-50 Identities = 172/194 (88%) Strand = Plus / Plus Query: 559 ccaatctcaagtaccgggctgggctcgtcctcatcgtcgccgtcgtgctcatatgggtca 618 |||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 286 ccaatctcaagtaccgtgctggcctcgtcctcatcgtcgccgtggtgctcatatgggtca 345 Query: 619 cctccgccgaggtcacgcaggggatattcgctagctacaagcaaccgttcgcaattactt 678 ||||||| ||||||||||||||||||||| ||| ||||||||||| || |||||||||| Sbjct: 346 cctccgcggaggtcacgcaggggatattcactaaatacaagcaaccctttgcaattactt 405 Query: 679 acttgggggcctcccttatggtcatctacatcccgttggcatttctaaaggatttcatat 738 || ||||||||||||||||| ||||||| || || | ||||| |||||||||| |||| Sbjct: 406 acctgggggcctcccttatgatcatctatatacctctttcatttttaaaggattttatat 465 Query: 739 acaaattgttgaga 752 || ||||||||| Sbjct: 466 gtaatttgttgaga 479
>gb|AY109987.1| Zea mays CL34132_1 mRNA sequence Length = 1257 Score = 357 bits (180), Expect = 1e-94 Identities = 312/356 (87%) Strand = Plus / Plus Query: 975 ctttccactaaggagattgcaatttacggactgtatctttgtcccatatggtttgttaca 1034 |||||||||||||||||||||| || ||| |||||||||| ||| |||||||||| ||| Sbjct: 192 ctttccactaaggagattgcaacgtatggattgtatctttgccccttatggtttgtgaca 251 Query: 1035 gagtatttgtcaaatgcagcacttgcaagaactagtgtggcaagcactactgtactatct 1094 |||||||| || |||||||| ||||||||||||||||| || || || || || || ||| Sbjct: 252 gagtatttatcgaatgcagcgcttgcaagaactagtgttgccagtaccacagtgctgtct 311 Query: 1095 tcaacttcgggactcttcacccttttcattggtgtgctacttggccaagactccataaat 1154 |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 312 tcaacttcaggactcttcactcttttcattggtgttttacttggccaagactccataaat 371 Query: 1155 gctgccaaagttattgccgtttttgttagtatggctggtgtggcaatgacaactatgggc 1214 ||||| ||||||||||| ||||| |||| |||||||| || | |||||||||||||||| Sbjct: 372 gctgcgaaagttattgctgttttcattagcatggctggcgttgtaatgacaactatgggc 431 Query: 1215 cagacttgggcaacagatgaatcagaagtaagcaattcaggggccacacagaggactctt 1274 |||||||||||| | ||||||||||||| | |||| || || ||||||||||||||| Sbjct: 432 cagacttgggcatctgatgaatcagaagcaggcaaatctggttttacacagaggactctt 491 Query: 1275 ctaggtgatatgtttggtcttatgtcagctatgtcatatggtctattcactgtgct 1330 ||||||||||||||||||||||||||||| || | ||||||||||| |||||||| Sbjct: 492 ctaggtgatatgtttggtcttatgtcagcaatcgcctatggtctatttactgtgct 547 Score = 309 bits (156), Expect = 2e-80 Identities = 243/272 (89%) Strand = Plus / Plus Query: 1422 tggtggcttgtctggccattaactgcacttggcattgagccaaagtttacaatgccccac 1481 |||||| |||||||||||||||| ||||| || |||||||||||||| ||||||||||| Sbjct: 636 tggtggattgtctggccattaaccgcactaggtgttgagccaaagttttcaatgccccac 695 Query: 1482 tcagctaaagtggatgaagtggtgctggcaaacggcctcattggaagtgtgctatctgac 1541 |||||||||||||||||||||||| ||||||| |||| || |||||||| |||| ||| Sbjct: 696 tcagctaaagtggatgaagtggtggtggcaaatagcctaatcggaagtgtattatcagac 755 Query: 1542 tacttctgggctctttctgttgtttggactaatcccttggtggccacgttaggcatgtca 1601 ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 756 tacttctgggctctttctgttgtttggactactcccttggtggccactctaggcatgtct 815 Query: 1602 ctcacaattccactagcaatggttgctgacatggtcatccacggtcgacattattcagca 1661 |||||||||||| |||||||||||||||| ||| |||| ||||| || || ||||||||| Sbjct: 816 ctcacaattccaatagcaatggttgctgatatgatcattcacggccgtcactattcagca 875 Query: 1662 gtctacatttttggctctgtccaggtattttc 1693 || || ||| |||| ||||||||||||||||| Sbjct: 876 gtatatattcttggttctgtccaggtattttc 907
>emb|AL117265.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811D08, complete sequence Length = 123337 Score = 272 bits (137), Expect = 5e-69 Identities = 197/217 (90%) Strand = Plus / Minus Query: 1036 agtatttgtcaaatgcagcacttgcaagaactagtgtggcaagcactactgtactatctt 1095 |||| ||||||||||| |||||||||||||||||||| || || |||||||||||||||| Sbjct: 15614 agtacttgtcaaatgcggcacttgcaagaactagtgttgctagtactactgtactatctt 15555 Query: 1096 caacttcgggactcttcacccttttcattggtgtgctacttggccaagactccataaatg 1155 |||| || ||||||||||| ||||||||||||||||||||||||||||| || ||||||| Sbjct: 15554 caacgtcaggactcttcactcttttcattggtgtgctacttggccaagattctataaatg 15495 Query: 1156 ctgccaaagttattgccgtttttgttagtatggctggtgtggcaatgacaactatgggcc 1215 |||| ||||||||||| |||||| |||| ||||||||||||| ||||||||| ||||| | Sbjct: 15494 ctgcaaaagttattgctgtttttattagcatggctggtgtggtaatgacaaccatggggc 15435 Query: 1216 agacttgggcaacagatgaatcagaagtaagcaattc 1252 ||||||||||| |||||||||||||| | |||||||| Sbjct: 15434 agacttgggcatcagatgaatcagaaatcagcaattc 15398 Score = 159 bits (80), Expect = 5e-35 Identities = 125/140 (89%) Strand = Plus / Minus Query: 1549 gggctctttctgttgtttggactaatcccttggtggccacgttaggcatgtcactcacaa 1608 |||||||||||||||||||||||| ||| ||||||||||| || |||||||||||||||| Sbjct: 14286 gggctctttctgttgtttggactactcctttggtggccaccttgggcatgtcactcacaa 14227 Query: 1609 ttccactagcaatggttgctgacatggtcatccacggtcgacattattcagcagtctaca 1668 |||||||||||||||| ||||| ||| |||| || ||||| | ||||||||| ||||| | Sbjct: 14226 ttccactagcaatggtggctgatatgatcattcatggtcgtcgttattcagcggtctata 14167 Query: 1669 tttttggctctgtccaggta 1688 | ||||| |||||||||||| Sbjct: 14166 tctttggttctgtccaggta 14147 Score = 155 bits (78), Expect = 7e-34 Identities = 200/240 (83%), Gaps = 3/240 (1%) Strand = Plus / Minus Query: 791 caaatcttcctttggcggtagcgctcctgtgaagaatggtgaatttcagaagatgctgga 850 ||||||||| || || ||| | |||||| |||||||||||||||| ||||||||| |||| Sbjct: 15976 caaatcttctttcggtggttgtgctcctctgaagaatggtgaattccagaagatgttgga 15917 Query: 851 gatggaaccacagaaaaccgtggtgataaaaattactgatgtggaccttcctgtactaga 910 |||||| | || ||||| | || ||||| |||||||||||| |||||||| |||| Sbjct: 15916 aatggaatctcaaaaaactatagtcataaactatactgatgtggatattcctgtaataga 15857 Query: 911 agagacaaagccacttatttgtggaattggtgaatgtgagggtgatgttttgaaggagca 970 ||||||||| || ||||| |||||||| ||||| || ||| |||||||||||||| Sbjct: 15856 agagacaaaacctcttatatgtggaatcactgaattcga---tgacgttttgaaggagca 15800 Query: 971 acagctttccactaaggagattgcaatttacggactgtatctttgtcccatatggtttgt 1030 | | ||||||||||||||||||||||| || || ||||||||||||||||||||||||| Sbjct: 15799 agaactttccactaaggagattgcaatgtatgggttgtatctttgtcccatatggtttgt 15740 Score = 129 bits (65), Expect = 4e-26 Identities = 77/81 (95%) Strand = Plus / Minus Query: 559 ccaatctcaagtaccgggctgggctcgtcctcatcgtcgccgtcgtgctcatatgggtca 618 |||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 16981 ccaatctcaagtaccgtgctggcctcgtcctcatcgtcgccgtggtgctcatatgggtca 16922 Query: 619 cctccgccgaggtcacgcagg 639 ||||||| ||||||||||||| Sbjct: 16921 cctccgcggaggtcacgcagg 16901 Score = 127 bits (64), Expect = 2e-25 Identities = 106/120 (88%) Strand = Plus / Minus Query: 1431 gtctggccattaactgcacttggcattgagccaaagtttacaatgccccactcagctaaa 1490 ||||||||||| || ||| | |||||||| |||||||||||||| ||||||||||| ||| Sbjct: 14482 gtctggccattgaccgcattaggcattgaaccaaagtttacaataccccactcagccaaa 14423 Query: 1491 gtggatgaagtggtgctggcaaacggcctcattggaagtgtgctatctgactacttctgg 1550 ||||||||||||||| ||||||| ||||| ||||||||||| | || |||||||||||| Sbjct: 14422 gtggatgaagtggtgttggcaaatggccttattggaagtgtattgtcagactacttctgg 14363 Score = 119 bits (60), Expect = 4e-23 Identities = 95/106 (89%), Gaps = 3/106 (2%) Strand = Plus / Minus Query: 1326 gtgcttctcaaaaagtttgctggaggagaaggatcagaaaaggttgatgtccaaaaactg 1385 |||||||| |||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 14942 gtgcttctaaaaaagtttgctggagaggaagga---gaaaaggttgatgtccaaaaactg 14886 Query: 1386 tttggttttctcggacttttcagtctttgtcttctctggtggcttg 1431 ||||| | |||||||||||||||||| ||||||||||||||||| Sbjct: 14885 tttggctacctcggacttttcagtcttgttcttctctggtggcttg 14840 Score = 99.6 bits (50), Expect = 4e-17 Identities = 65/70 (92%) Strand = Plus / Minus Query: 1257 gccacacagaggactcttctaggtgatatgtttggtcttatgtcagctatgtcatatggt 1316 ||||| ||||| |||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 15079 gccactcagagaactcttctaggtgacatgtttggtcttctgtcagctatgtcatatggt 15020 Query: 1317 ctattcactg 1326 ||||||||| Sbjct: 15019 ttattcactg 15010 Score = 91.7 bits (46), Expect = 9e-15 Identities = 100/118 (84%) Strand = Plus / Minus Query: 635 gcaggggatattcgctagctacaagcaaccgttcgcaattacttacttgggggcctccct 694 ||||||||||||| ||| ||||||||||| || |||||||||||| ||||||||||||| Sbjct: 16132 gcaggggatattcactaaatacaagcaaccctttgcaattacttacctgggggcctccct 16073 Query: 695 tatggtcatctacatcccgttggcatttctaaaggatttcatatacaaattgttgaga 752 |||| ||||||| || || | ||||| |||||||||| |||| || ||||||||| Sbjct: 16072 tatgatcatctatatacctctttcatttttaaaggattttatatgtaatttgttgaga 16015 Score = 50.1 bits (25), Expect = 0.032 Identities = 46/53 (86%) Strand = Plus / Minus Query: 1683 caggtattttctgggttcgtcatcgccaatcttgccgaccgcgtctcacgttt 1735 ||||||||||||||||| ||||| || |||||||| || ||| | |||||||| Sbjct: 13920 caggtattttctgggtttgtcattgcaaatcttgcggatcgcttttcacgttt 13868
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 272 bits (137), Expect = 5e-69 Identities = 197/217 (90%) Strand = Plus / Minus Query: 1036 agtatttgtcaaatgcagcacttgcaagaactagtgtggcaagcactactgtactatctt 1095 |||| ||||||||||| |||||||||||||||||||| || || |||||||||||||||| Sbjct: 32892534 agtacttgtcaaatgcggcacttgcaagaactagtgttgctagtactactgtactatctt 32892475 Query: 1096 caacttcgggactcttcacccttttcattggtgtgctacttggccaagactccataaatg 1155 |||| || ||||||||||| ||||||||||||||||||||||||||||| || ||||||| Sbjct: 32892474 caacgtcaggactcttcactcttttcattggtgtgctacttggccaagattctataaatg 32892415 Query: 1156 ctgccaaagttattgccgtttttgttagtatggctggtgtggcaatgacaactatgggcc 1215 |||| ||||||||||| |||||| |||| ||||||||||||| ||||||||| ||||| | Sbjct: 32892414 ctgcaaaagttattgctgtttttattagcatggctggtgtggtaatgacaaccatggggc 32892355 Query: 1216 agacttgggcaacagatgaatcagaagtaagcaattc 1252 ||||||||||| |||||||||||||| | |||||||| Sbjct: 32892354 agacttgggcatcagatgaatcagaaatcagcaattc 32892318 Score = 159 bits (80), Expect = 5e-35 Identities = 125/140 (89%) Strand = Plus / Minus Query: 1549 gggctctttctgttgtttggactaatcccttggtggccacgttaggcatgtcactcacaa 1608 |||||||||||||||||||||||| ||| ||||||||||| || |||||||||||||||| Sbjct: 32891207 gggctctttctgttgtttggactactcctttggtggccaccttgggcatgtcactcacaa 32891148 Query: 1609 ttccactagcaatggttgctgacatggtcatccacggtcgacattattcagcagtctaca 1668 |||||||||||||||| ||||| ||| |||| || ||||| | ||||||||| ||||| | Sbjct: 32891147 ttccactagcaatggtggctgatatgatcattcatggtcgtcgttattcagcggtctata 32891088 Query: 1669 tttttggctctgtccaggta 1688 | ||||| |||||||||||| Sbjct: 32891087 tctttggttctgtccaggta 32891068 Score = 155 bits (78), Expect = 7e-34 Identities = 200/240 (83%), Gaps = 3/240 (1%) Strand = Plus / Minus Query: 791 caaatcttcctttggcggtagcgctcctgtgaagaatggtgaatttcagaagatgctgga 850 ||||||||| || || ||| | |||||| |||||||||||||||| ||||||||| |||| Sbjct: 32892896 caaatcttctttcggtggttgtgctcctctgaagaatggtgaattccagaagatgttgga 32892837 Query: 851 gatggaaccacagaaaaccgtggtgataaaaattactgatgtggaccttcctgtactaga 910 |||||| | || ||||| | || ||||| |||||||||||| |||||||| |||| Sbjct: 32892836 aatggaatctcaaaaaactatagtcataaactatactgatgtggatattcctgtaataga 32892777 Query: 911 agagacaaagccacttatttgtggaattggtgaatgtgagggtgatgttttgaaggagca 970 ||||||||| || ||||| |||||||| ||||| || ||| |||||||||||||| Sbjct: 32892776 agagacaaaacctcttatatgtggaatcactgaattcga---tgacgttttgaaggagca 32892720 Query: 971 acagctttccactaaggagattgcaatttacggactgtatctttgtcccatatggtttgt 1030 | | ||||||||||||||||||||||| || || ||||||||||||||||||||||||| Sbjct: 32892719 agaactttccactaaggagattgcaatgtatgggttgtatctttgtcccatatggtttgt 32892660 Score = 129 bits (65), Expect = 4e-26 Identities = 77/81 (95%) Strand = Plus / Minus Query: 559 ccaatctcaagtaccgggctgggctcgtcctcatcgtcgccgtcgtgctcatatgggtca 618 |||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 32893901 ccaatctcaagtaccgtgctggcctcgtcctcatcgtcgccgtggtgctcatatgggtca 32893842 Query: 619 cctccgccgaggtcacgcagg 639 ||||||| ||||||||||||| Sbjct: 32893841 cctccgcggaggtcacgcagg 32893821 Score = 127 bits (64), Expect = 2e-25 Identities = 106/120 (88%) Strand = Plus / Minus Query: 1431 gtctggccattaactgcacttggcattgagccaaagtttacaatgccccactcagctaaa 1490 ||||||||||| || ||| | |||||||| |||||||||||||| ||||||||||| ||| Sbjct: 32891403 gtctggccattgaccgcattaggcattgaaccaaagtttacaataccccactcagccaaa 32891344 Query: 1491 gtggatgaagtggtgctggcaaacggcctcattggaagtgtgctatctgactacttctgg 1550 ||||||||||||||| ||||||| ||||| ||||||||||| | || |||||||||||| Sbjct: 32891343 gtggatgaagtggtgttggcaaatggccttattggaagtgtattgtcagactacttctgg 32891284 Score = 119 bits (60), Expect = 4e-23 Identities = 95/106 (89%), Gaps = 3/106 (2%) Strand = Plus / Minus Query: 1326 gtgcttctcaaaaagtttgctggaggagaaggatcagaaaaggttgatgtccaaaaactg 1385 |||||||| |||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 32891862 gtgcttctaaaaaagtttgctggagaggaagga---gaaaaggttgatgtccaaaaactg 32891806 Query: 1386 tttggttttctcggacttttcagtctttgtcttctctggtggcttg 1431 ||||| | |||||||||||||||||| ||||||||||||||||| Sbjct: 32891805 tttggctacctcggacttttcagtcttgttcttctctggtggcttg 32891760 Score = 99.6 bits (50), Expect = 4e-17 Identities = 65/70 (92%) Strand = Plus / Minus Query: 1257 gccacacagaggactcttctaggtgatatgtttggtcttatgtcagctatgtcatatggt 1316 ||||| ||||| |||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 32891999 gccactcagagaactcttctaggtgacatgtttggtcttctgtcagctatgtcatatggt 32891940 Query: 1317 ctattcactg 1326 ||||||||| Sbjct: 32891939 ttattcactg 32891930 Score = 91.7 bits (46), Expect = 9e-15 Identities = 100/118 (84%) Strand = Plus / Minus Query: 635 gcaggggatattcgctagctacaagcaaccgttcgcaattacttacttgggggcctccct 694 ||||||||||||| ||| ||||||||||| || |||||||||||| ||||||||||||| Sbjct: 32893052 gcaggggatattcactaaatacaagcaaccctttgcaattacttacctgggggcctccct 32892993 Query: 695 tatggtcatctacatcccgttggcatttctaaaggatttcatatacaaattgttgaga 752 |||| ||||||| || || | ||||| |||||||||| |||| || ||||||||| Sbjct: 32892992 tatgatcatctatatacctctttcatttttaaaggattttatatgtaatttgttgaga 32892935 Score = 50.1 bits (25), Expect = 0.032 Identities = 46/53 (86%) Strand = Plus / Minus Query: 1683 caggtattttctgggttcgtcatcgccaatcttgccgaccgcgtctcacgttt 1735 ||||||||||||||||| ||||| || |||||||| || ||| | |||||||| Sbjct: 32890840 caggtattttctgggtttgtcattgcaaatcttgcggatcgcttttcacgttt 32890788
>emb|AL606445.2|OSJN00018 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070O11, complete sequence Length = 134231 Score = 272 bits (137), Expect = 5e-69 Identities = 197/217 (90%) Strand = Plus / Minus Query: 1036 agtatttgtcaaatgcagcacttgcaagaactagtgtggcaagcactactgtactatctt 1095 |||| ||||||||||| |||||||||||||||||||| || || |||||||||||||||| Sbjct: 35383 agtacttgtcaaatgcggcacttgcaagaactagtgttgctagtactactgtactatctt 35324 Query: 1096 caacttcgggactcttcacccttttcattggtgtgctacttggccaagactccataaatg 1155 |||| || ||||||||||| ||||||||||||||||||||||||||||| || ||||||| Sbjct: 35323 caacgtcaggactcttcactcttttcattggtgtgctacttggccaagattctataaatg 35264 Query: 1156 ctgccaaagttattgccgtttttgttagtatggctggtgtggcaatgacaactatgggcc 1215 |||| ||||||||||| |||||| |||| ||||||||||||| ||||||||| ||||| | Sbjct: 35263 ctgcaaaagttattgctgtttttattagcatggctggtgtggtaatgacaaccatggggc 35204 Query: 1216 agacttgggcaacagatgaatcagaagtaagcaattc 1252 ||||||||||| |||||||||||||| | |||||||| Sbjct: 35203 agacttgggcatcagatgaatcagaaatcagcaattc 35167 Score = 159 bits (80), Expect = 5e-35 Identities = 125/140 (89%) Strand = Plus / Minus Query: 1549 gggctctttctgttgtttggactaatcccttggtggccacgttaggcatgtcactcacaa 1608 |||||||||||||||||||||||| ||| ||||||||||| || |||||||||||||||| Sbjct: 34056 gggctctttctgttgtttggactactcctttggtggccaccttgggcatgtcactcacaa 33997 Query: 1609 ttccactagcaatggttgctgacatggtcatccacggtcgacattattcagcagtctaca 1668 |||||||||||||||| ||||| ||| |||| || ||||| | ||||||||| ||||| | Sbjct: 33996 ttccactagcaatggtggctgatatgatcattcatggtcgtcgttattcagcggtctata 33937 Query: 1669 tttttggctctgtccaggta 1688 | ||||| |||||||||||| Sbjct: 33936 tctttggttctgtccaggta 33917 Score = 155 bits (78), Expect = 7e-34 Identities = 200/240 (83%), Gaps = 3/240 (1%) Strand = Plus / Minus Query: 791 caaatcttcctttggcggtagcgctcctgtgaagaatggtgaatttcagaagatgctgga 850 ||||||||| || || ||| | |||||| |||||||||||||||| ||||||||| |||| Sbjct: 35745 caaatcttctttcggtggttgtgctcctctgaagaatggtgaattccagaagatgttgga 35686 Query: 851 gatggaaccacagaaaaccgtggtgataaaaattactgatgtggaccttcctgtactaga 910 |||||| | || ||||| | || ||||| |||||||||||| |||||||| |||| Sbjct: 35685 aatggaatctcaaaaaactatagtcataaactatactgatgtggatattcctgtaataga 35626 Query: 911 agagacaaagccacttatttgtggaattggtgaatgtgagggtgatgttttgaaggagca 970 ||||||||| || ||||| |||||||| ||||| || ||| |||||||||||||| Sbjct: 35625 agagacaaaacctcttatatgtggaatcactgaattcga---tgacgttttgaaggagca 35569 Query: 971 acagctttccactaaggagattgcaatttacggactgtatctttgtcccatatggtttgt 1030 | | ||||||||||||||||||||||| || || ||||||||||||||||||||||||| Sbjct: 35568 agaactttccactaaggagattgcaatgtatgggttgtatctttgtcccatatggtttgt 35509 Score = 129 bits (65), Expect = 4e-26 Identities = 77/81 (95%) Strand = Plus / Minus Query: 559 ccaatctcaagtaccgggctgggctcgtcctcatcgtcgccgtcgtgctcatatgggtca 618 |||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 36750 ccaatctcaagtaccgtgctggcctcgtcctcatcgtcgccgtggtgctcatatgggtca 36691 Query: 619 cctccgccgaggtcacgcagg 639 ||||||| ||||||||||||| Sbjct: 36690 cctccgcggaggtcacgcagg 36670 Score = 127 bits (64), Expect = 2e-25 Identities = 106/120 (88%) Strand = Plus / Minus Query: 1431 gtctggccattaactgcacttggcattgagccaaagtttacaatgccccactcagctaaa 1490 ||||||||||| || ||| | |||||||| |||||||||||||| ||||||||||| ||| Sbjct: 34252 gtctggccattgaccgcattaggcattgaaccaaagtttacaataccccactcagccaaa 34193 Query: 1491 gtggatgaagtggtgctggcaaacggcctcattggaagtgtgctatctgactacttctgg 1550 ||||||||||||||| ||||||| ||||| ||||||||||| | || |||||||||||| Sbjct: 34192 gtggatgaagtggtgttggcaaatggccttattggaagtgtattgtcagactacttctgg 34133 Score = 119 bits (60), Expect = 4e-23 Identities = 95/106 (89%), Gaps = 3/106 (2%) Strand = Plus / Minus Query: 1326 gtgcttctcaaaaagtttgctggaggagaaggatcagaaaaggttgatgtccaaaaactg 1385 |||||||| |||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 34711 gtgcttctaaaaaagtttgctggagaggaagga---gaaaaggttgatgtccaaaaactg 34655 Query: 1386 tttggttttctcggacttttcagtctttgtcttctctggtggcttg 1431 ||||| | |||||||||||||||||| ||||||||||||||||| Sbjct: 34654 tttggctacctcggacttttcagtcttgttcttctctggtggcttg 34609 Score = 99.6 bits (50), Expect = 4e-17 Identities = 65/70 (92%) Strand = Plus / Minus Query: 1257 gccacacagaggactcttctaggtgatatgtttggtcttatgtcagctatgtcatatggt 1316 ||||| ||||| |||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 34848 gccactcagagaactcttctaggtgacatgtttggtcttctgtcagctatgtcatatggt 34789 Query: 1317 ctattcactg 1326 ||||||||| Sbjct: 34788 ttattcactg 34779 Score = 91.7 bits (46), Expect = 9e-15 Identities = 100/118 (84%) Strand = Plus / Minus Query: 635 gcaggggatattcgctagctacaagcaaccgttcgcaattacttacttgggggcctccct 694 ||||||||||||| ||| ||||||||||| || |||||||||||| ||||||||||||| Sbjct: 35901 gcaggggatattcactaaatacaagcaaccctttgcaattacttacctgggggcctccct 35842 Query: 695 tatggtcatctacatcccgttggcatttctaaaggatttcatatacaaattgttgaga 752 |||| ||||||| || || | ||||| |||||||||| |||| || ||||||||| Sbjct: 35841 tatgatcatctatatacctctttcatttttaaaggattttatatgtaatttgttgaga 35784 Score = 50.1 bits (25), Expect = 0.032 Identities = 46/53 (86%) Strand = Plus / Minus Query: 1683 caggtattttctgggttcgtcatcgccaatcttgccgaccgcgtctcacgttt 1735 ||||||||||||||||| ||||| || |||||||| || ||| | |||||||| Sbjct: 33689 caggtattttctgggtttgtcattgcaaatcttgcggatcgcttttcacgttt 33637
>ref|NM_119366.2| Arabidopsis thaliana unknown protein (AT4G32140) mRNA, complete cds Length = 1555 Score = 115 bits (58), Expect = 6e-22 Identities = 211/262 (80%) Strand = Plus / Plus Query: 1418 tctctggtggcttgtctggccattaactgcacttggcattgagccaaagtttacaatgcc 1477 ||||||||||||||| |||||||| || ||| | || || || ||||||||||| || || Sbjct: 1087 tctctggtggcttgtgtggccattgacagcattagggatcgaaccaaagtttaccatacc 1146 Query: 1478 ccactcagctaaagtggatgaagtggtgctggcaaacggcctcattggaagtgtgctatc 1537 ||||| | ||||| |||||||| || | || ||||| |||| |||||||| || || Sbjct: 1147 acactctgtgaaagttgatgaagttgtcttagccaacggtttcatcggaagtgtcctctc 1206 Query: 1538 tgactacttctgggctctttctgttgtttggactaatcccttggtggccacgttaggcat 1597 |||||| || ||||| |||||||| || ||||| | ||| |||| || || | ||||| Sbjct: 1207 tgactatttttgggcactttctgtggtgtggacaactccgctggtagcgacactgggcat 1266 Query: 1598 gtcactcacaattccactagcaatggttgctgacatggtcatccacggtcgacattattc 1657 ||| ||||||||||| || || ||||||||||||||| | ||||| ||||| |||||||| Sbjct: 1267 gtctctcacaattccgcttgcgatggttgctgacatgatgatccatggtcgtcattattc 1326 Query: 1658 agcagtctacatttttggctct 1679 ||| | |||||| |||||||| Sbjct: 1327 agccatttacattcttggctct 1348 Score = 77.8 bits (39), Expect = 1e-10 Identities = 90/107 (84%) Strand = Plus / Plus Query: 1023 tggtttgttacagagtatttgtcaaatgcagcacttgcaagaactagtgtggcaagcact 1082 |||||||| ||||||||| |||| ||||| || ||||| | || ||||||||||| ||| Sbjct: 695 tggtttgtaacagagtatctgtccaatgctgctcttgctcgtacaagtgtggcaagtact 754 Query: 1083 actgtactatcttcaacttcgggactcttcacccttttcattggtgt 1129 |||||| | |||||||| |||||||| || || || ||||||||||| Sbjct: 755 actgtattgtcttcaacctcgggactgtttactctgttcattggtgt 801
>gb|AY113057.1| Arabidopsis thaliana AT4g32140/F10N7_50 mRNA, complete cds Length = 1185 Score = 115 bits (58), Expect = 6e-22 Identities = 211/262 (80%) Strand = Plus / Plus Query: 1418 tctctggtggcttgtctggccattaactgcacttggcattgagccaaagtttacaatgcc 1477 ||||||||||||||| |||||||| || ||| | || || || ||||||||||| || || Sbjct: 855 tctctggtggcttgtgtggccattgacagcattagggatcgaaccaaagtttaccatacc 914 Query: 1478 ccactcagctaaagtggatgaagtggtgctggcaaacggcctcattggaagtgtgctatc 1537 ||||| | ||||| |||||||| || | || ||||| |||| |||||||| || || Sbjct: 915 acactctgtgaaagttgatgaagttgtcttagccaacggtttcatcggaagtgtcctctc 974 Query: 1538 tgactacttctgggctctttctgttgtttggactaatcccttggtggccacgttaggcat 1597 |||||| || ||||| |||||||| || ||||| | ||| |||| || || | ||||| Sbjct: 975 tgactatttttgggcactttctgtggtgtggacaactccgctggtagcgacactgggcat 1034 Query: 1598 gtcactcacaattccactagcaatggttgctgacatggtcatccacggtcgacattattc 1657 ||| ||||||||||| || || ||||||||||||||| | ||||| ||||| |||||||| Sbjct: 1035 gtctctcacaattccgcttgcgatggttgctgacatgatgatccatggtcgtcattattc 1094 Query: 1658 agcagtctacatttttggctct 1679 ||| | |||||| |||||||| Sbjct: 1095 agccatttacattcttggctct 1116 Score = 77.8 bits (39), Expect = 1e-10 Identities = 90/107 (84%) Strand = Plus / Plus Query: 1023 tggtttgttacagagtatttgtcaaatgcagcacttgcaagaactagtgtggcaagcact 1082 |||||||| ||||||||| |||| ||||| || ||||| | || ||||||||||| ||| Sbjct: 463 tggtttgtaacagagtatctgtccaatgctgctcttgctcgtacaagtgtggcaagtact 522 Query: 1083 actgtactatcttcaacttcgggactcttcacccttttcattggtgt 1129 |||||| | |||||||| |||||||| || || || ||||||||||| Sbjct: 523 actgtattgtcttcaacctcgggactgtttactctgttcattggtgt 569
>gb|AY057538.1| Arabidopsis thaliana AT4g32140/F10N7_50 mRNA, complete cds Length = 1523 Score = 115 bits (58), Expect = 6e-22 Identities = 211/262 (80%) Strand = Plus / Plus Query: 1418 tctctggtggcttgtctggccattaactgcacttggcattgagccaaagtttacaatgcc 1477 ||||||||||||||| |||||||| || ||| | || || || ||||||||||| || || Sbjct: 1052 tctctggtggcttgtgtggccattgacagcattagggatcgaaccaaagtttaccatacc 1111 Query: 1478 ccactcagctaaagtggatgaagtggtgctggcaaacggcctcattggaagtgtgctatc 1537 ||||| | ||||| |||||||| || | || ||||| |||| |||||||| || || Sbjct: 1112 acactctgtgaaagttgatgaagttgtcttagccaacggtttcatcggaagtgtcctctc 1171 Query: 1538 tgactacttctgggctctttctgttgtttggactaatcccttggtggccacgttaggcat 1597 |||||| || ||||| |||||||| || ||||| | ||| |||| || || | ||||| Sbjct: 1172 tgactatttttgggcactttctgtggtgtggacaactccgctggtagcgacactgggcat 1231 Query: 1598 gtcactcacaattccactagcaatggttgctgacatggtcatccacggtcgacattattc 1657 ||| ||||||||||| || || ||||||||||||||| | ||||| ||||| |||||||| Sbjct: 1232 gtctctcacaattccgcttgcgatggttgctgacatgatgatccatggtcgtcattattc 1291 Query: 1658 agcagtctacatttttggctct 1679 ||| | |||||| |||||||| Sbjct: 1292 agccatttacattcttggctct 1313 Score = 77.8 bits (39), Expect = 1e-10 Identities = 90/107 (84%) Strand = Plus / Plus Query: 1023 tggtttgttacagagtatttgtcaaatgcagcacttgcaagaactagtgtggcaagcact 1082 |||||||| ||||||||| |||| ||||| || ||||| | || ||||||||||| ||| Sbjct: 660 tggtttgtaacagagtatctgtccaatgctgctcttgctcgtacaagtgtggcaagtact 719 Query: 1083 actgtactatcttcaacttcgggactcttcacccttttcattggtgt 1129 |||||| | |||||||| |||||||| || || || ||||||||||| Sbjct: 720 actgtattgtcttcaacctcgggactgtttactctgttcattggtgt 766
>emb|BX826689.1|CNS0A46J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB55ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1394 Score = 115 bits (58), Expect = 6e-22 Identities = 211/262 (80%) Strand = Plus / Plus Query: 1418 tctctggtggcttgtctggccattaactgcacttggcattgagccaaagtttacaatgcc 1477 ||||||||||||||| |||||||| || ||| | || || || ||||||||||| || || Sbjct: 965 tctctggtggcttgtgtggccattgacagcattagggatcgaaccaaagtttaccatacc 1024 Query: 1478 ccactcagctaaagtggatgaagtggtgctggcaaacggcctcattggaagtgtgctatc 1537 ||||| | ||||| |||||||| || | || ||||| |||| |||||||| || || Sbjct: 1025 acactctgtgaaagttgatgaagttgtcttagccaacggtttcatcggaagtgtcctctc 1084 Query: 1538 tgactacttctgggctctttctgttgtttggactaatcccttggtggccacgttaggcat 1597 |||||| || ||||| |||||||| || ||||| | ||| |||| || || | ||||| Sbjct: 1085 tgactatttttgggcactttctgtggtgtggacaactccgctggtagcgacactgggcat 1144 Query: 1598 gtcactcacaattccactagcaatggttgctgacatggtcatccacggtcgacattattc 1657 ||| ||||||||||| || || ||||||||||||||| | ||||| ||||| |||||||| Sbjct: 1145 gtctctcacaattccgcttgcgatggttgctgacatgatgatccatggtcgtcattattc 1204 Query: 1658 agcagtctacatttttggctct 1679 ||| | |||||| |||||||| Sbjct: 1205 agccatttacattcttggctct 1226 Score = 77.8 bits (39), Expect = 1e-10 Identities = 90/107 (84%) Strand = Plus / Plus Query: 1023 tggtttgttacagagtatttgtcaaatgcagcacttgcaagaactagtgtggcaagcact 1082 |||||||| ||||||||| |||| ||||| || ||||| | || ||||||||||| ||| Sbjct: 573 tggtttgtaacagagtatctgtccaatgctgctcttgctcgtacaagtgtggcaagtact 632 Query: 1083 actgtactatcttcaacttcgggactcttcacccttttcattggtgt 1129 |||||| | |||||||| |||||||| || || || ||||||||||| Sbjct: 633 actgtattgtcttcaacctcgggactgtttactctgttcattggtgt 679
>emb|AL021636.3|ATF10N7 Arabidopsis thaliana DNA chromosome 4, BAC clone F10N7 (ESSA project) Length = 96585 Score = 77.8 bits (39), Expect = 1e-10 Identities = 75/87 (86%) Strand = Plus / Plus Query: 1593 ggcatgtcactcacaattccactagcaatggttgctgacatggtcatccacggtcgacat 1652 |||||||| ||||||||||| || || ||||||||||||||| | ||||| ||||| ||| Sbjct: 15972 ggcatgtctctcacaattccgcttgcgatggttgctgacatgatgatccatggtcgtcat 16031 Query: 1653 tattcagcagtctacatttttggctct 1679 |||||||| | |||||| |||||||| Sbjct: 16032 tattcagccatttacattcttggctct 16058 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 1068 agtgtggcaagcactactgtactatcttcaacttcgggactcttcacccttttcattggt 1127 ||||||||||| ||||||||| | |||||||| |||||||| || || || ||||||||| Sbjct: 14888 agtgtggcaagtactactgtattgtcttcaacctcgggactgtttactctgttcattggt 14947 Query: 1128 gt 1129 || Sbjct: 14948 gt 14949
>emb|BX826546.1|CNS0A456 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB38ZC02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1492 Score = 77.8 bits (39), Expect = 1e-10 Identities = 90/107 (84%) Strand = Plus / Plus Query: 1023 tggtttgttacagagtatttgtcaaatgcagcacttgcaagaactagtgtggcaagcact 1082 |||||||| ||||||||| |||| ||||| || ||||| | || ||||||||||| ||| Sbjct: 687 tggtttgtaacagagtatctgtccaatgctgctcttgctcgtacaagtgtggcaagtact 746 Query: 1083 actgtactatcttcaacttcgggactcttcacccttttcattggtgt 1129 |||||| | |||||||| |||||||| || || || ||||||||||| Sbjct: 747 actgtattgtcttcaacctcgggactgtttactctgttcattggtgt 793
>emb|AL161580.2|ATCHRIV76 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 76 Length = 165698 Score = 77.8 bits (39), Expect = 1e-10 Identities = 75/87 (86%) Strand = Plus / Minus Query: 1593 ggcatgtcactcacaattccactagcaatggttgctgacatggtcatccacggtcgacat 1652 |||||||| ||||||||||| || || ||||||||||||||| | ||||| ||||| ||| Sbjct: 97981 ggcatgtctctcacaattccgcttgcgatggttgctgacatgatgatccatggtcgtcat 97922 Query: 1653 tattcagcagtctacatttttggctct 1679 |||||||| | |||||| |||||||| Sbjct: 97921 tattcagccatttacattcttggctct 97895 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 1068 agtgtggcaagcactactgtactatcttcaacttcgggactcttcacccttttcattggt 1127 ||||||||||| ||||||||| | |||||||| |||||||| || || || ||||||||| Sbjct: 99065 agtgtggcaagtactactgtattgtcttcaacctcgggactgtttactctgttcattggt 99006 Query: 1128 gt 1129 || Sbjct: 99005 gt 99004
>dbj|AP005328.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-689C9, complete sequences Length = 170427 Score = 50.1 bits (25), Expect = 0.032 Identities = 25/25 (100%) Strand = Plus / Plus Query: 1328 gcttctcaaaaagtttgctggagga 1352 ||||||||||||||||||||||||| Sbjct: 149952 gcttctcaaaaagtttgctggagga 149976
>dbj|AP005211.2| Homo sapiens genomic DNA, chromosome 18, clone:RP11-267C19, complete sequence Length = 156794 Score = 50.1 bits (25), Expect = 0.032 Identities = 25/25 (100%) Strand = Plus / Plus Query: 1328 gcttctcaaaaagtttgctggagga 1352 ||||||||||||||||||||||||| Sbjct: 98129 gcttctcaaaaagtttgctggagga 98153
>gb|AC122525.4| Mus musculus BAC clone RP24-496O17 from chromosome 9, complete sequence Length = 196461 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1344 gctggaggagaaggatcagaaaag 1367 |||||||||||||||||||||||| Sbjct: 170668 gctggaggagaaggatcagaaaag 170645
>gb|AC163637.4| Mus musculus BAC clone RP23-186O3 from chromosome 9, complete sequence Length = 215370 Score = 48.1 bits (24), Expect = 0.12 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1344 gctggaggagaaggatcagaaaag 1367 |||||||||||||||||||||||| Sbjct: 26123 gctggaggagaaggatcagaaaag 26100
>gb|AC161216.4| Mus musculus chromosome 7, clone RP23-8K23, complete sequence Length = 228889 Score = 46.1 bits (23), Expect = 0.49 Identities = 23/23 (100%) Strand = Plus / Plus Query: 364 ggggagggaagcggggcgggcga 386 ||||||||||||||||||||||| Sbjct: 125263 ggggagggaagcggggcgggcga 125285
>gb|AC102077.7| Mus musculus chromosome 7, clone RP23-423B21, complete sequence Length = 229721 Score = 46.1 bits (23), Expect = 0.49 Identities = 23/23 (100%) Strand = Plus / Plus Query: 364 ggggagggaagcggggcgggcga 386 ||||||||||||||||||||||| Sbjct: 21613 ggggagggaagcggggcgggcga 21635
>gb|AC131315.16| Mus musculus chromosome 7, clone RP24-535I10, complete sequence Length = 213958 Score = 46.1 bits (23), Expect = 0.49 Identities = 23/23 (100%) Strand = Plus / Minus Query: 364 ggggagggaagcggggcgggcga 386 ||||||||||||||||||||||| Sbjct: 113530 ggggagggaagcggggcgggcga 113508
>ref|NM_001062356.1| Oryza sativa (japonica cultivar-group) Os05g0473400 (Os05g0473400) mRNA, complete cds Length = 2925 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 581 gctcgtcctcatcgtcgccgtc 602 |||||||||||||||||||||| Sbjct: 2642 gctcgtcctcatcgtcgccgtc 2621
>ref|NM_001062355.1| Oryza sativa (japonica cultivar-group) Os05g0473300 (Os05g0473300) mRNA, complete cds Length = 1638 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 581 gctcgtcctcatcgtcgccgtc 602 |||||||||||||||||||||| Sbjct: 1386 gctcgtcctcatcgtcgccgtc 1407
>ref|XM_359884.1| Magnaporthe grisea 70-15 hypothetical protein (MG04893.4) partial mRNA Length = 1566 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 586 tcctcatcgtcgccgtcgtgct 607 |||||||||||||||||||||| Sbjct: 1004 tcctcatcgtcgccgtcgtgct 1025
>ref|NM_100762.1| Arabidopsis thaliana carbohydrate transporter (AT1G08900) mRNA, complete cds Length = 1596 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 821 gaagaatggtgaatttcagaag 842 |||||||||||||||||||||| Sbjct: 1081 gaagaatggtgaatttcagaag 1102
>gb|AC119804.12| Mus musculus chromosome 7, clone RP23-144D10, complete sequence Length = 208232 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 969 caacagctttccactaaggaga 990 |||||||||||||||||||||| Sbjct: 26465 caacagctttccactaaggaga 26486
>gb|AC079830.9| Oryza sativa chromosome 3 BAC OSJNBb0009F04 genomic sequence, complete sequence Length = 129655 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 531 tcgagtcgcggcggcatgggcatggc 556 ||||||| |||||||||||||||||| Sbjct: 113669 tcgagtctcggcggcatgggcatggc 113644
>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01, complete sequence Length = 146432 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 581 gctcgtcctcatcgtcgccgtc 602 |||||||||||||||||||||| Sbjct: 38047 gctcgtcctcatcgtcgccgtc 38068
>gb|DQ105587.1| Arabidopsis thaliana putative sugar transporter (At1g08900) mRNA, complete cds Length = 1389 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 821 gaagaatggtgaatttcagaag 842 |||||||||||||||||||||| Sbjct: 1038 gaagaatggtgaatttcagaag 1059
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 581 gctcgtcctcatcgtcgccgtc 602 |||||||||||||||||||||| Sbjct: 23106272 gctcgtcctcatcgtcgccgtc 23106293
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 531 tcgagtcgcggcggcatgggcatggc 556 ||||||| |||||||||||||||||| Sbjct: 26556938 tcgagtctcggcggcatgggcatggc 26556913
>gb|AF386931.1|AF386931 Arabidopsis thaliana Similar to Beta integral membrane protein (F7G19.22) mRNA, complete cds Length = 1596 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 821 gaagaatggtgaatttcagaag 842 |||||||||||||||||||||| Sbjct: 1081 gaagaatggtgaatttcagaag 1102
>dbj|AK109855.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-G01, full insert sequence Length = 1638 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 581 gctcgtcctcatcgtcgccgtc 602 |||||||||||||||||||||| Sbjct: 1386 gctcgtcctcatcgtcgccgtc 1407
>dbj|AK100933.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023136C05, full insert sequence Length = 2925 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 581 gctcgtcctcatcgtcgccgtc 602 |||||||||||||||||||||| Sbjct: 285 gctcgtcctcatcgtcgccgtc 306
>dbj|AK072263.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004E05, full insert sequence Length = 2826 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 581 gctcgtcctcatcgtcgccgtc 602 |||||||||||||||||||||| Sbjct: 207 gctcgtcctcatcgtcgccgtc 228
>gb|AC153102.3| Sus scrofa clone RP44-33N10, complete sequence Length = 113400 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 818 tgtgaagaatggtgaatttcagaaga 843 ||||||| |||||||||||||||||| Sbjct: 112906 tgtgaagtatggtgaatttcagaaga 112931
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1485 gctaaagtggatgaagtggtgc 1506 |||||||||||||||||||||| Sbjct: 4244229 gctaaagtggatgaagtggtgc 4244208
>gb|AC000106.1|F7G19 Sequence of BAC F7G19 from Arabidopsis thaliana chromosome 1, complete sequence Length = 110514 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 821 gaagaatggtgaatttcagaag 842 |||||||||||||||||||||| Sbjct: 88220 gaagaatggtgaatttcagaag 88199
>ref|NM_011103.2| Mus musculus protein kinase C, delta (Prkcd), mRNA Length = 2536 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 gctcgtcctcatcgtcgccgt 601 ||||||||||||||||||||| Sbjct: 1673 gctcgtcctcatcgtcgccgt 1653
>gb|EF043854.1| Synthetic construct clone ATCC 10627784 protein kinase C delta1 mRNA, complete cds Length = 2025 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 gctcgtcctcatcgtcgccgt 601 ||||||||||||||||||||| Sbjct: 1660 gctcgtcctcatcgtcgccgt 1640
>gb|CP000477.1| Methanosaeta thermophila PT, complete genome Length = 1879471 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1177 ttgttagtatggctggtgtgg 1197 ||||||||||||||||||||| Sbjct: 1819379 ttgttagtatggctggtgtgg 1819399
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 730 atttcatatacaaattgttga 750 ||||||||||||||||||||| Sbjct: 5529655 atttcatatacaaattgttga 5529635
>gb|AC187519.3| Pan troglodytes BAC clone CH251-634N6 from chromosome 7, complete sequence Length = 206800 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1905 ctctgttccccttttaccttt 1925 ||||||||||||||||||||| Sbjct: 67916 ctctgttccccttttaccttt 67896
>dbj|AB201456.1| Mus musculus Prkcd mRNA for protein kinase C, delta VII, complete cds Length = 2005 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 gctcgtcctcatcgtcgccgt 601 ||||||||||||||||||||| Sbjct: 1577 gctcgtcctcatcgtcgccgt 1557
>dbj|AB201455.1| Mus musculus Prkcd mRNA for protein kinase C, delta VI, complete cds Length = 1927 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 gctcgtcctcatcgtcgccgt 601 ||||||||||||||||||||| Sbjct: 1499 gctcgtcctcatcgtcgccgt 1479
>dbj|AB201454.1| Mus musculus Prkcd mRNA for protein kinase C, delta V, complete cds Length = 2215 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 gctcgtcctcatcgtcgccgt 601 ||||||||||||||||||||| Sbjct: 1577 gctcgtcctcatcgtcgccgt 1557
>dbj|AB201453.1| Mus musculus Prkcd mRNA for protein kinase C, delta IV, complete cds Length = 2139 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 gctcgtcctcatcgtcgccgt 601 ||||||||||||||||||||| Sbjct: 1499 gctcgtcctcatcgtcgccgt 1479
>gb|AC099009.2| Drosophila melanogaster clone BACR17M11, complete sequence Length = 188872 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 730 atttcatatacaaattgttga 750 ||||||||||||||||||||| Sbjct: 37640 atttcatatacaaattgttga 37620
>gb|AY545076.1| Mus musculus protein kinase C delta mRNA, complete cds Length = 2025 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 gctcgtcctcatcgtcgccgt 601 ||||||||||||||||||||| Sbjct: 1660 gctcgtcctcatcgtcgccgt 1640
>gb|AC129216.4| Mus musculus BAC clone RP24-446C11 from chromosome 14, complete sequence Length = 190338 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 tggggagggaagcggggcggg 383 ||||||||||||||||||||| Sbjct: 90956 tggggagggaagcggggcggg 90936
>gb|AC122832.4| Mus musculus BAC clone RP23-179D3 from 12, complete sequence Length = 224056 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1896 gcactgcagctctgttcccct 1916 ||||||||||||||||||||| Sbjct: 78836 gcactgcagctctgttcccct 78856
>gb|AC073125.5| Homo sapiens BAC clone RP11-636L15 from 7, complete sequence Length = 188804 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1905 ctctgttccccttttaccttt 1925 ||||||||||||||||||||| Sbjct: 89617 ctctgttccccttttaccttt 89597
>gb|AC134043.1| Homo sapiens chromosome 5 clone RP11-175K6, complete sequence Length = 154098 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 tctgccttccagtggaaactt 274 ||||||||||||||||||||| Sbjct: 13768 tctgccttccagtggaaactt 13788
>dbj|AK144231.1| Mus musculus B cells CRL-1669 BCL1 Clone 13.20-3B3 cDNA, RIKEN full-length enriched library, clone:G430135L03 product:protein kinase C, delta, full insert sequence Length = 2775 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 gctcgtcctcatcgtcgccgt 601 ||||||||||||||||||||| Sbjct: 1902 gctcgtcctcatcgtcgccgt 1882
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 564 ctcaagtaccgggctgggctc 584 ||||||||||||||||||||| Sbjct: 5773817 ctcaagtaccgggctgggctc 5773797
>gb|AC069079.11| Homo sapiens chromosome 10 clone RP11-539E19, complete sequence Length = 216006 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1542 tacttctgggctctttctgtt 1562 ||||||||||||||||||||| Sbjct: 152387 tacttctgggctctttctgtt 152367
>dbj|AK168768.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920051M02 product:protein kinase C, delta, full insert sequence Length = 2765 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 gctcgtcctcatcgtcgccgt 601 ||||||||||||||||||||| Sbjct: 1892 gctcgtcctcatcgtcgccgt 1872
>dbj|AK171476.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730217L10 product:protein kinase C, delta, full insert sequence Length = 2778 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 gctcgtcctcatcgtcgccgt 601 ||||||||||||||||||||| Sbjct: 1901 gctcgtcctcatcgtcgccgt 1881
>gb|AC004673.1| Homo sapiens X BAC GSHB-590J15 (Genome Systems Human BAC library) complete sequence Length = 236281 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1972 gaaacagtcaaagcttggcat 1992 ||||||||||||||||||||| Sbjct: 107221 gaaacagtcaaagcttggcat 107201
>gb|AC011376.5| Homo sapiens chromosome 5 clone CTB-11I22, complete sequence Length = 132768 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 tctgccttccagtggaaactt 274 ||||||||||||||||||||| Sbjct: 90181 tctgccttccagtggaaactt 90161
>gb|AC012049.8| Homo sapiens chromosome 10 clone RP11-76F22, complete sequence Length = 142656 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1542 tacttctgggctctttctgtt 1562 ||||||||||||||||||||| Sbjct: 51520 tacttctgggctctttctgtt 51500
>gb|AC022537.8| Homo sapiens chromosome 10 clone RP11-40C11, complete sequence Length = 154939 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1542 tacttctgggctctttctgtt 1562 ||||||||||||||||||||| Sbjct: 2506 tacttctgggctctttctgtt 2486
>emb|AL031133.1|HS281H8 Human DNA sequence from clone RP1-281H8 on chromosome 6q25.1-25.3 Contains a novel protein similar to FLJ23231, KIAA1726, CG10889, KIAA0323, KIAA0615, the 3' end of the MAP3K7IP2 gene for mitogen-activated protein kinase kinase kinase 7 interacting protein 2 (TAK1-binding protein 2 (TAB2, FLJ21885, KIAA0733)), a novel gene (possible pseudogene) similar to the SMT3H2 gene for SMT3 suppressor of mif two 3 homolog 2 (yeast)(SMT3 (suppressor of mif two 3, yeast) homolog 2 (HSMT3, SMT3B)) an HSPC128 protein (HSPC128) pseudogene and three CpG islands, complete sequence Length = 110414 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 818 tgtgaagaatggtgaatttca 838 ||||||||||||||||||||| Sbjct: 35521 tgtgaagaatggtgaatttca 35541
>gb|AC154646.2| Mus musculus BAC clone RP23-283B12 from chromosome 14, complete sequence Length = 189102 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 gctcgtcctcatcgtcgccgt 601 ||||||||||||||||||||| Sbjct: 81668 gctcgtcctcatcgtcgccgt 81648
>gb|AC092795.2| Homo sapiens chromosome 3 clone RP11-9J18, complete sequence Length = 142517 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 837 cagaagatgctggagatggaa 857 ||||||||||||||||||||| Sbjct: 25113 cagaagatgctggagatggaa 25133
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 100 ccgcccgccaccccgactcccccgc 124 |||||||| |||||||||||||||| Sbjct: 26118 ccgcccgcgaccccgactcccccgc 26094
>gb|AC006472.2|AC006472 Drosophila melanogaster, chromosome 2R, region 45E1-46A2, BAC clone BACR48G21, complete sequence Length = 156346 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 730 atttcatatacaaattgttga 750 ||||||||||||||||||||| Sbjct: 7013 atttcatatacaaattgttga 7033
>gb|AC079790.6| Homo sapiens BAC clone RP11-484E6 from 2, complete sequence Length = 161723 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1897 cactgcagctctgttcccctt 1917 ||||||||||||||||||||| Sbjct: 61729 cactgcagctctgttcccctt 61749
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 539 cggcggcatgggcatggctcc 559 ||||||||||||||||||||| Sbjct: 6964741 cggcggcatgggcatggctcc 6964721
>emb|BX537310.7| Zebrafish DNA sequence from clone CH211-138N17 in linkage group 3, complete sequence Length = 163184 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 942 gaatgtgagggtgatgttttg 962 ||||||||||||||||||||| Sbjct: 133147 gaatgtgagggtgatgttttg 133127
>gb|AC105051.1| Homo sapiens BAC clone RP11-292A3 from 2, complete sequence Length = 147639 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1861 tgtcttctctgtaaatcataa 1881 ||||||||||||||||||||| Sbjct: 132174 tgtcttctctgtaaatcataa 132194
>dbj|BS000021.1| Pan troglodytes chromosome 22 clone:PTB-141K15, map 22, complete sequences Length = 183533 Score = 42.1 bits (21), Expect = 7.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1227 acagatgaatcagaagtaagcaatt 1251 ||||||||||||| ||||||||||| Sbjct: 63443 acagatgaatcagtagtaagcaatt 63419
>gb|AF200529.1|AF200529 Zea mays cellulose synthase-5 (CesA-5) mRNA, complete cds Length = 3676 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 424 aagcatgtggccgggcaggtg 444 ||||||||||||||||||||| Sbjct: 284 aagcatgtggccgggcaggtg 304
>ref|XM_570754.1| Cryptococcus neoformans var. neoformans JEC21 phospholipase D (CNE01480) partial mRNA Length = 2462 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1538 tgactacttctgggctctttc 1558 ||||||||||||||||||||| Sbjct: 263 tgactacttctgggctctttc 283
>ref|XM_570753.1| Cryptococcus neoformans var. neoformans JEC21 phospholipase D (CNE01480) partial mRNA Length = 2516 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1538 tgactacttctgggctctttc 1558 ||||||||||||||||||||| Sbjct: 317 tgactacttctgggctctttc 337
>gb|AF274044.1|AF274044 Mus musculus PKC delta gene, complete cds Length = 16129 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 gctcgtcctcatcgtcgccgt 601 ||||||||||||||||||||| Sbjct: 12063 gctcgtcctcatcgtcgccgt 12043
>gb|AF068743.1|AF068743 Haloferax volcanii pyruvate decarboxylase E1 alpha subunit (pdhA) and pyruvate decarboxylase E1 beta subunit (pdhB) genes, complete cds; and lipoate acetyl-transferase E2 (pdhC) gene, partial cds Length = 3808 Score = 42.1 bits (21), Expect = 7.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 576 gctgggctcgtcctcatcgtcgccgtcgt 604 |||||||||||| || ||||||||||||| Sbjct: 2824 gctgggctcgtcgtcctcgtcgccgtcgt 2796
>gb|AF251036.1|AF251036 Mus musculus protein kinase C delta mRNA, complete cds Length = 2025 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 gctcgtcctcatcgtcgccgt 601 ||||||||||||||||||||| Sbjct: 1660 gctcgtcctcatcgtcgccgt 1640
>gb|AC121091.10| Mus musculus chromosome 1, clone RP24-191N24, complete sequence Length = 150109 Score = 42.1 bits (21), Expect = 7.7 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 1405 tcagtctttgtcttctctggtggcttg-tctggccat 1440 ||||||||||| || |||||||||||| ||||||||| Sbjct: 34963 tcagtctttgttttgtctggtggcttgctctggccat 34927
>gb|AY110079.1| Zea mays CL1164_1 mRNA sequence Length = 3696 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 424 aagcatgtggccgggcaggtg 444 ||||||||||||||||||||| Sbjct: 284 aagcatgtggccgggcaggtg 304
>gb|AY109199.1| Zea mays PCO099940 mRNA sequence Length = 629 Score = 42.1 bits (21), Expect = 7.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 84 tccagccccgccgacaccgcccgccaccccgac 116 |||||| || |||||||||||||| |||||||| Sbjct: 297 tccagctccaccgacaccgcccgcgaccccgac 329
>gb|AC005894.1|AC005894 Drosophila melanogaster, chromosome 2R, region 46A1-46B2, P1 clones DS00050, DS00191, and DS05369, complete sequence Length = 196337 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 730 atttcatatacaaattgttga 750 ||||||||||||||||||||| Sbjct: 33063 atttcatatacaaattgttga 33043
>emb|AJ544598.1|TRU544598 Takifugu rubripes dmd gene upstream region 6 Length = 14382 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 879 aaaattactgatgtggacctt 899 ||||||||||||||||||||| Sbjct: 1760 aaaattactgatgtggacctt 1780
>gb|AF027149.1|AF027149 Babesia bovis phosphomannomutase homolog (pmm), rhoptry associated protein-1 (rap-1) allele 1, rhoptry associated protein-1 (rap-1) allele 2, and DnaJ homolog genes, complete cds Length = 11184 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1278 ggtgatatgtttggtcttatg 1298 ||||||||||||||||||||| Sbjct: 7593 ggtgatatgtttggtcttatg 7613
>emb|X60304.1|MMNPKCD M.musculus mRNA for protein kinase C-delta Length = 2538 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 gctcgtcctcatcgtcgccgt 601 ||||||||||||||||||||| Sbjct: 1673 gctcgtcctcatcgtcgccgt 1653
>gb|M69042.1|MUSPKCDA Mouse protein kinase C delta mRNA, complete cds Length = 2564 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 gctcgtcctcatcgtcgccgt 601 ||||||||||||||||||||| Sbjct: 1892 gctcgtcctcatcgtcgccgt 1872
>dbj|AB011812.1| Mus musculus mRNA for PKC delta II, complete cds Length = 2646 Score = 42.1 bits (21), Expect = 7.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 gctcgtcctcatcgtcgccgt 601 ||||||||||||||||||||| Sbjct: 1741 gctcgtcctcatcgtcgccgt 1721 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 322,858,271 Number of extensions: 17500864 Number of successful extensions: 92335 Number of sequences better than 10.0: 86 Number of HSP's gapped: 92320 Number of HSP's successfully gapped: 124 Length of query: 2018 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1995 Effective length of database: 18,503,978,556 Effective search space: 36915437219220 Effective search space used: 36915437219220 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
