ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf92c06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001072089.1| Oryza sativa (japonica cultivar-group) Os11g0109900 (Os11g0109900) mRNA, complete cds Length = 1829 Score = 268 bits (135), Expect = 7e-68 Identities = 299/354 (84%), Gaps = 6/354 (1%) Strand = Plus / Plus Query: 141 atcagggttgagaattgctacgtcttcaagagcaggctgcaggagtacgtgcagaaagcc 200 |||||||||||||| |||||||||||||||||| ||||||| ||||| | |||||||||| Sbjct: 159 atcagggttgagaactgctacgtcttcaagagccggctgcaagagtatgcgcagaaagcc 218 Query: 201 ggcctcatgacgccagagtaccaaaccctcaaggaggggccttcccatgcgccaatcttc 260 |||||| ||| |||||||| || ||| |||||||||| |||||||||| ||| ||||| Sbjct: 219 ggcctccagactccagagtatcataccttcaaggagggaccttcccatgagcctgtcttc 278 Query: 261 agctccaccgtggtgattaacgacgtcaagtacgactcgctgcccgggttcttcagccgg 320 | ||||| ||||||||||| || || || ||||| |||||||| ||||||| | | Sbjct: 279 aagtccacagtggtgattaataacaccagctatgactccctgcccggattcttcaacaga 338 Query: 321 aaggctgcagagcagtcggctgccgaagtagcgctcatggaaatcggcaagtctatggcg 380 ||||||||||| ||||| ||||| ||||| || ||||||||||| | |||||| | Sbjct: 339 aaggctgcagaacagtctgctgctgaagttgccctcatggaaattgtcaagtcca----- 393 Query: 381 ttaccaaccaatgcaaccatccctgcagtccaagaaactggtctgtgcaagaatcttctt 440 ||||| |||| |||| |||||| || || ||||| ||||| |||||||||||||||||| Sbjct: 394 -taccagccaacgcaaacatcccagctgttcaagagactgggctgtgcaagaatcttctt 452 Query: 441 caggagtatgctcagaagatgaattatgctattccatcttatatttgcaacaaa 494 ||||||||||| ||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 453 caggagtatgcacagaagatgaattatgccattccatcttatatttgcaccaaa 506 Score = 232 bits (117), Expect = 4e-57 Identities = 240/281 (85%) Strand = Plus / Plus Query: 506 catatgcaccgtagagattggtggaatacaatacattggtgctacagcacggacaaagaa 565 ||||||||| ||||||||||||||||||||||| ||||||||| |||| | |||||||| Sbjct: 530 catatgcactgtagagattggtggaatacaatatattggtgctgcagccagaacaaagaa 589 Query: 566 agaggcagagataaaagctgcccgaactgctcttcttgcaatccaaggccaatcagaggg 625 ||| ||||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 590 agatgcagagataaaagctgctcgaactgctcttctggcaattcaaggtcaatcagaggg 649 Query: 626 ttgcgcgaatggtaccacaaaatatattgttgtgcctggaaaaaggcaaggtaaggacac 685 || || |||||| | |||||||||||||| || ||||| |||||| ||||||||| Sbjct: 650 ttctgcaaatggtgcgacaaaatatattgtagttcctggtaaaagggtaggtaaggaggt 709 Query: 686 cgagaaaaagcccgttgaaactccaaaatcacttaagaccaagaaaggtggtttcaagaa 745 ||||||| ||| ||||||| || ||| ||||||| | |||||||||||||||||||| Sbjct: 710 agagaaaatgccaattgaaacccccaaaccacttaaaataaagaaaggtggtttcaagaa 769 Query: 746 gcaacggaacaagaataaattcatcaagaagaatggccaag 786 | || ||||||||| |||||||| |||||| |||| |||| Sbjct: 770 gaaatggaacaagaggaaattcatgaagaaggatggtcaag 810 Score = 50.1 bits (25), Expect = 0.032 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1308 gctgcaatggtgcaacctaatgatgaagctaga 1340 |||||| ||||||||||| |||||||||||||| Sbjct: 1011 gctgcattggtgcaacctgatgatgaagctaga 1043 Score = 50.1 bits (25), Expect = 0.032 Identities = 61/73 (83%) Strand = Plus / Plus Query: 1305 gatgctgcaatggtgcaacctaatgatgaagctagatgtgtaaagcaggagctactaatt 1364 ||||||||||| |||||||||| || |||||| | ||||||||||||||| | | || Sbjct: 1125 gatgctgcaattctgcaacctaaagaggaagcttcaagtgtaaagcaggagccattcatc 1184 Query: 1365 gacactgcaatgc 1377 || |||||||||| Sbjct: 1185 gatactgcaatgc 1197
>dbj|AK121852.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101N14, full insert sequence Length = 1826 Score = 268 bits (135), Expect = 7e-68 Identities = 299/354 (84%), Gaps = 6/354 (1%) Strand = Plus / Plus Query: 141 atcagggttgagaattgctacgtcttcaagagcaggctgcaggagtacgtgcagaaagcc 200 |||||||||||||| |||||||||||||||||| ||||||| ||||| | |||||||||| Sbjct: 161 atcagggttgagaactgctacgtcttcaagagccggctgcaagagtatgcgcagaaagcc 220 Query: 201 ggcctcatgacgccagagtaccaaaccctcaaggaggggccttcccatgcgccaatcttc 260 |||||| ||| |||||||| || ||| |||||||||| |||||||||| ||| ||||| Sbjct: 221 ggcctccagactccagagtatcataccttcaaggagggaccttcccatgagcctgtcttc 280 Query: 261 agctccaccgtggtgattaacgacgtcaagtacgactcgctgcccgggttcttcagccgg 320 | ||||| ||||||||||| || || || ||||| |||||||| ||||||| | | Sbjct: 281 aagtccacagtggtgattaataacaccagctatgactccctgcccggattcttcaacaga 340 Query: 321 aaggctgcagagcagtcggctgccgaagtagcgctcatggaaatcggcaagtctatggcg 380 ||||||||||| ||||| ||||| ||||| || ||||||||||| | |||||| | Sbjct: 341 aaggctgcagaacagtctgctgctgaagttgccctcatggaaattgtcaagtcca----- 395 Query: 381 ttaccaaccaatgcaaccatccctgcagtccaagaaactggtctgtgcaagaatcttctt 440 ||||| |||| |||| |||||| || || ||||| ||||| |||||||||||||||||| Sbjct: 396 -taccagccaacgcaaacatcccagctgttcaagagactgggctgtgcaagaatcttctt 454 Query: 441 caggagtatgctcagaagatgaattatgctattccatcttatatttgcaacaaa 494 ||||||||||| ||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 455 caggagtatgcacagaagatgaattatgccattccatcttatatttgcaccaaa 508 Score = 232 bits (117), Expect = 4e-57 Identities = 240/281 (85%) Strand = Plus / Plus Query: 506 catatgcaccgtagagattggtggaatacaatacattggtgctacagcacggacaaagaa 565 ||||||||| ||||||||||||||||||||||| ||||||||| |||| | |||||||| Sbjct: 532 catatgcactgtagagattggtggaatacaatatattggtgctgcagccagaacaaagaa 591 Query: 566 agaggcagagataaaagctgcccgaactgctcttcttgcaatccaaggccaatcagaggg 625 ||| ||||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 592 agatgcagagataaaagctgctcgaactgctcttctggcaattcaaggtcaatcagaggg 651 Query: 626 ttgcgcgaatggtaccacaaaatatattgttgtgcctggaaaaaggcaaggtaaggacac 685 || || |||||| | |||||||||||||| || ||||| |||||| ||||||||| Sbjct: 652 ttctgcaaatggtgcgacaaaatatattgtagttcctggtaaaagggtaggtaaggaggt 711 Query: 686 cgagaaaaagcccgttgaaactccaaaatcacttaagaccaagaaaggtggtttcaagaa 745 ||||||| ||| ||||||| || ||| ||||||| | |||||||||||||||||||| Sbjct: 712 agagaaaatgccaattgaaacccccaaaccacttaaaataaagaaaggtggtttcaagaa 771 Query: 746 gcaacggaacaagaataaattcatcaagaagaatggccaag 786 | || ||||||||| |||||||| |||||| |||| |||| Sbjct: 772 gaaatggaacaagaggaaattcatgaagaaggatggtcaag 812 Score = 50.1 bits (25), Expect = 0.032 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1308 gctgcaatggtgcaacctaatgatgaagctaga 1340 |||||| ||||||||||| |||||||||||||| Sbjct: 1013 gctgcattggtgcaacctgatgatgaagctaga 1045 Score = 50.1 bits (25), Expect = 0.032 Identities = 61/73 (83%) Strand = Plus / Plus Query: 1305 gatgctgcaatggtgcaacctaatgatgaagctagatgtgtaaagcaggagctactaatt 1364 ||||||||||| |||||||||| || |||||| | ||||||||||||||| | | || Sbjct: 1127 gatgctgcaattctgcaacctaaagaggaagcttcaagtgtaaagcaggagccattcatc 1186 Query: 1365 gacactgcaatgc 1377 || |||||||||| Sbjct: 1187 gatactgcaatgc 1199
>dbj|AK063961.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-G10, full insert sequence Length = 1829 Score = 268 bits (135), Expect = 7e-68 Identities = 299/354 (84%), Gaps = 6/354 (1%) Strand = Plus / Plus Query: 141 atcagggttgagaattgctacgtcttcaagagcaggctgcaggagtacgtgcagaaagcc 200 |||||||||||||| |||||||||||||||||| ||||||| ||||| | |||||||||| Sbjct: 159 atcagggttgagaactgctacgtcttcaagagccggctgcaagagtatgcgcagaaagcc 218 Query: 201 ggcctcatgacgccagagtaccaaaccctcaaggaggggccttcccatgcgccaatcttc 260 |||||| ||| |||||||| || ||| |||||||||| |||||||||| ||| ||||| Sbjct: 219 ggcctccagactccagagtatcataccttcaaggagggaccttcccatgagcctgtcttc 278 Query: 261 agctccaccgtggtgattaacgacgtcaagtacgactcgctgcccgggttcttcagccgg 320 | ||||| ||||||||||| || || || ||||| |||||||| ||||||| | | Sbjct: 279 aagtccacagtggtgattaataacaccagctatgactccctgcccggattcttcaacaga 338 Query: 321 aaggctgcagagcagtcggctgccgaagtagcgctcatggaaatcggcaagtctatggcg 380 ||||||||||| ||||| ||||| ||||| || ||||||||||| | |||||| | Sbjct: 339 aaggctgcagaacagtctgctgctgaagttgccctcatggaaattgtcaagtcca----- 393 Query: 381 ttaccaaccaatgcaaccatccctgcagtccaagaaactggtctgtgcaagaatcttctt 440 ||||| |||| |||| |||||| || || ||||| ||||| |||||||||||||||||| Sbjct: 394 -taccagccaacgcaaacatcccagctgttcaagagactgggctgtgcaagaatcttctt 452 Query: 441 caggagtatgctcagaagatgaattatgctattccatcttatatttgcaacaaa 494 ||||||||||| ||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 453 caggagtatgcacagaagatgaattatgccattccatcttatatttgcaccaaa 506 Score = 232 bits (117), Expect = 4e-57 Identities = 240/281 (85%) Strand = Plus / Plus Query: 506 catatgcaccgtagagattggtggaatacaatacattggtgctacagcacggacaaagaa 565 ||||||||| ||||||||||||||||||||||| ||||||||| |||| | |||||||| Sbjct: 530 catatgcactgtagagattggtggaatacaatatattggtgctgcagccagaacaaagaa 589 Query: 566 agaggcagagataaaagctgcccgaactgctcttcttgcaatccaaggccaatcagaggg 625 ||| ||||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 590 agatgcagagataaaagctgctcgaactgctcttctggcaattcaaggtcaatcagaggg 649 Query: 626 ttgcgcgaatggtaccacaaaatatattgttgtgcctggaaaaaggcaaggtaaggacac 685 || || |||||| | |||||||||||||| || ||||| |||||| ||||||||| Sbjct: 650 ttctgcaaatggtgcgacaaaatatattgtagttcctggtaaaagggtaggtaaggaggt 709 Query: 686 cgagaaaaagcccgttgaaactccaaaatcacttaagaccaagaaaggtggtttcaagaa 745 ||||||| ||| ||||||| || ||| ||||||| | |||||||||||||||||||| Sbjct: 710 agagaaaatgccaattgaaacccccaaaccacttaaaataaagaaaggtggtttcaagaa 769 Query: 746 gcaacggaacaagaataaattcatcaagaagaatggccaag 786 | || ||||||||| |||||||| |||||| |||| |||| Sbjct: 770 gaaatggaacaagaggaaattcatgaagaaggatggtcaag 810 Score = 50.1 bits (25), Expect = 0.032 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1308 gctgcaatggtgcaacctaatgatgaagctaga 1340 |||||| ||||||||||| |||||||||||||| Sbjct: 1011 gctgcattggtgcaacctgatgatgaagctaga 1043 Score = 50.1 bits (25), Expect = 0.032 Identities = 61/73 (83%) Strand = Plus / Plus Query: 1305 gatgctgcaatggtgcaacctaatgatgaagctagatgtgtaaagcaggagctactaatt 1364 ||||||||||| |||||||||| || |||||| | ||||||||||||||| | | || Sbjct: 1125 gatgctgcaattctgcaacctaaagaggaagcttcaagtgtaaagcaggagccattcatc 1184 Query: 1365 gacactgcaatgc 1377 || |||||||||| Sbjct: 1185 gatactgcaatgc 1197
>ref|NM_001072492.1| Oryza sativa (japonica cultivar-group) Os12g0109900 (Os12g0109900) mRNA, complete cds Length = 1751 Score = 264 bits (133), Expect = 1e-66 Identities = 289/341 (84%) Strand = Plus / Plus Query: 506 catatgcaccgtagagattggtggaatacaatacattggtgctacagcacggacaaagaa 565 ||||||||| ||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 503 catatgcactgtagagattggtggaatacaatatattggtgctgcagccaggacaaagaa 562 Query: 566 agaggcagagataaaagctgcccgaactgctcttcttgcaatccaaggccaatcagaggg 625 ||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 563 agatgcagagataaaagctgcccgaactgctcttctggcaatccaaggtcaatcagaggg 622 Query: 626 ttgcgcgaatggtaccacaaaatatattgttgtgcctggaaaaaggcaaggtaaggacac 685 || || |||||| | |||||||||||||| || ||||| |||||| ||||||||| Sbjct: 623 ttcggcaaatggtgcaacaaaatatattgtagttcctggtaaaagggtaggtaaggaggt 682 Query: 686 cgagaaaaagcccgttgaaactccaaaatcacttaagaccaagaaaggtggtttcaagaa 745 ||||||| ||| ||||||| || ||| ||||||| |||||||||||||||||||| Sbjct: 683 agagaaaaggccaattgaaacaccgaaaccacttaaagtaaagaaaggtggtttcaagaa 742 Query: 746 gcaacggaacaagaataaattcatcaagaagaatggccaagaagttaacgagggaaagga 805 | || ||||||||| |||||||| |||||| |||| |||| ||| | | || |||||| Sbjct: 743 gaaatggaacaagaggaaattcatgaagaaggatggtcaagctgttgatgtggaaaagga 802 Query: 806 tgagactggagtgcctggagatgctcatcattcagatgtcc 846 ||| || ||||| ||||||||||||| |||| ||||||| Sbjct: 803 tgaagctagagtggctggagatgctcacgattctgatgtcc 843 Score = 220 bits (111), Expect = 2e-53 Identities = 290/350 (82%), Gaps = 6/350 (1%) Strand = Plus / Plus Query: 145 gggttgagaattgctacgtcttcaagagcaggctgcaggagtacgtgcagaaagccggcc 204 |||||||||| |||||||||||||||||| ||||||| ||||| | |||||| |||||| Sbjct: 136 gggttgagaactgctacgtcttcaagagccggctgcaagagtatgcacagaaaaccggcc 195 Query: 205 tcatgacgccagagtaccaaaccctcaaggaggggccttcccatgcgccaatcttcagct 264 || ||| |||||||| || ||| |||||||||| |||||||| | ||| |||||| | Sbjct: 196 tccagactccagagtatcataccttcaaggagggaccttcccacgagcctgtcttcaagt 255 Query: 265 ccaccgtggtgattaacgacgtcaagtacgactcgctgcccgggttcttcagccggaagg 324 |||| ||||||||||| | || || ||||| |||||||| ||||||| | | |||| Sbjct: 256 ccacagtggtgattaataataccagctatgactccctgcccggattcttcaacagaaagg 315 Query: 325 ctgcagagcagtcggctgccgaagtagcgctcatggaaatcggcaagtctatggcgttac 384 ||||||| ||||| ||||| ||||| || ||||||||||| | |||||| || || Sbjct: 316 ctgcagaacagtctgctgctgaagttgccctcatggaaattgtcaagtccat------ac 369 Query: 385 caaccaatgcaaccatccctgcagtccaagaaactggtctgtgcaagaatcttcttcagg 444 || |||| |||| ||||| || || ||||| ||||| |||||||||||||||||||||| Sbjct: 370 cagccaacgcaaatatcccagctgttcaagagactgggctgtgcaagaatcttcttcagg 429 Query: 445 agtatgctcagaagatgaattatgctattccatcttatatttgcaacaaa 494 ||||||| ||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 430 agtatgcacagaagatgaattatgccattccatcttatatttgcaccaaa 479 Score = 50.1 bits (25), Expect = 0.032 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1308 gctgcaatggtgcaacctaatgatgaagctaga 1340 |||||| ||||||||||| |||||||||||||| Sbjct: 987 gctgcattggtgcaacctgatgatgaagctaga 1019 Score = 50.1 bits (25), Expect = 0.032 Identities = 61/73 (83%) Strand = Plus / Plus Query: 1305 gatgctgcaatggtgcaacctaatgatgaagctagatgtgtaaagcaggagctactaatt 1364 ||||||||||| |||||||||| || |||||| | ||||||||||||||| | | || Sbjct: 1101 gatgctgcaattctgcaacctaaagaggaagcttcaagtgtaaagcaggagccattcatc 1160 Query: 1365 gacactgcaatgc 1377 || |||||||||| Sbjct: 1161 gatactgcaatgc 1173 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1726 ttgaatcaaaatgcaatggccttccagt 1753 ||||||||||||||||| |||||||||| Sbjct: 1492 ttgaatcaaaatgcaatagccttccagt 1519
>gb|DQ009988.1| Oryza sativa (japonica cultivar-group) dsRNA binding protein RBP (RBP) mRNA, complete cds Length = 1233 Score = 264 bits (133), Expect = 1e-66 Identities = 289/341 (84%) Strand = Plus / Plus Query: 506 catatgcaccgtagagattggtggaatacaatacattggtgctacagcacggacaaagaa 565 ||||||||| ||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 447 catatgcactgtagagattggtggaatacaatatattggtgctgcagccaggacaaagaa 506 Query: 566 agaggcagagataaaagctgcccgaactgctcttcttgcaatccaaggccaatcagaggg 625 ||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 507 agatgcagagataaaagctgcccgaactgctcttctggcaatccaaggtcaatcagaggg 566 Query: 626 ttgcgcgaatggtaccacaaaatatattgttgtgcctggaaaaaggcaaggtaaggacac 685 || || |||||| | |||||||||||||| || ||||| |||||| ||||||||| Sbjct: 567 ttcggcaaatggtgcaacaaaatatattgtagttcctggtaaaagggtaggtaaggaggt 626 Query: 686 cgagaaaaagcccgttgaaactccaaaatcacttaagaccaagaaaggtggtttcaagaa 745 ||||||| ||| ||||||| || ||| ||||||| |||||||||||||||||||| Sbjct: 627 agagaaaaggccaattgaaacaccgaaaccacttaaagtaaagaaaggtggtttcaagaa 686 Query: 746 gcaacggaacaagaataaattcatcaagaagaatggccaagaagttaacgagggaaagga 805 | || ||||||||| |||||||| |||||| |||| |||| ||| | | || |||||| Sbjct: 687 gaaatggaacaagaggaaattcatgaagaaggatggtcaagctgttgatgtggaaaagga 746 Query: 806 tgagactggagtgcctggagatgctcatcattcagatgtcc 846 ||| || ||||| ||||||||||||| |||| ||||||| Sbjct: 747 tgaagctagagtggctggagatgctcacgattctgatgtcc 787 Score = 220 bits (111), Expect = 2e-53 Identities = 290/350 (82%), Gaps = 6/350 (1%) Strand = Plus / Plus Query: 145 gggttgagaattgctacgtcttcaagagcaggctgcaggagtacgtgcagaaagccggcc 204 |||||||||| |||||||||||||||||| ||||||| ||||| | |||||| |||||| Sbjct: 80 gggttgagaactgctacgtcttcaagagccggctgcaagagtatgcacagaaaaccggcc 139 Query: 205 tcatgacgccagagtaccaaaccctcaaggaggggccttcccatgcgccaatcttcagct 264 || ||| |||||||| || ||| |||||||||| |||||||| | ||| |||||| | Sbjct: 140 tccagactccagagtatcataccttcaaggagggaccttcccacgagcctgtcttcaagt 199 Query: 265 ccaccgtggtgattaacgacgtcaagtacgactcgctgcccgggttcttcagccggaagg 324 |||| ||||||||||| | || || ||||| |||||||| ||||||| | | |||| Sbjct: 200 ccacagtggtgattaataataccagctatgactccctgcccggattcttcaacagaaagg 259 Query: 325 ctgcagagcagtcggctgccgaagtagcgctcatggaaatcggcaagtctatggcgttac 384 ||||||| ||||| ||||| ||||| || ||||||||||| | |||||| || || Sbjct: 260 ctgcagaacagtctgctgctgaagttgccctcatggaaattgtcaagtccat------ac 313 Query: 385 caaccaatgcaaccatccctgcagtccaagaaactggtctgtgcaagaatcttcttcagg 444 || |||| |||| ||||| || || ||||| ||||| |||||||||||||||||||||| Sbjct: 314 cagccaacgcaaatatcccagctgttcaagagactgggctgtgcaagaatcttcttcagg 373 Query: 445 agtatgctcagaagatgaattatgctattccatcttatatttgcaacaaa 494 ||||||| ||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 374 agtatgcacagaagatgaattatgccattccatcttatatttgcaccaaa 423 Score = 50.1 bits (25), Expect = 0.032 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1308 gctgcaatggtgcaacctaatgatgaagctaga 1340 |||||| ||||||||||| |||||||||||||| Sbjct: 931 gctgcattggtgcaacctgatgatgaagctaga 963 Score = 50.1 bits (25), Expect = 0.032 Identities = 61/73 (83%) Strand = Plus / Plus Query: 1305 gatgctgcaatggtgcaacctaatgatgaagctagatgtgtaaagcaggagctactaatt 1364 ||||||||||| |||||||||| || |||||| | ||||||||||||||| | | || Sbjct: 1045 gatgctgcaattctgcaacctaaagaggaagcttcaagtgtaaagcaggagccattcatc 1104 Query: 1365 gacactgcaatgc 1377 || |||||||||| Sbjct: 1105 gatactgcaatgc 1117
>dbj|AK103543.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132D17, full insert sequence Length = 1752 Score = 264 bits (133), Expect = 1e-66 Identities = 289/341 (84%) Strand = Plus / Plus Query: 506 catatgcaccgtagagattggtggaatacaatacattggtgctacagcacggacaaagaa 565 ||||||||| ||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 504 catatgcactgtagagattggtggaatacaatatattggtgctgcagccaggacaaagaa 563 Query: 566 agaggcagagataaaagctgcccgaactgctcttcttgcaatccaaggccaatcagaggg 625 ||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 564 agatgcagagataaaagctgcccgaactgctcttctggcaatccaaggtcaatcagaggg 623 Query: 626 ttgcgcgaatggtaccacaaaatatattgttgtgcctggaaaaaggcaaggtaaggacac 685 || || |||||| | |||||||||||||| || ||||| |||||| ||||||||| Sbjct: 624 ttcggcaaatggtgcaacaaaatatattgtagttcctggtaaaagggtaggtaaggaggt 683 Query: 686 cgagaaaaagcccgttgaaactccaaaatcacttaagaccaagaaaggtggtttcaagaa 745 ||||||| ||| ||||||| || ||| ||||||| |||||||||||||||||||| Sbjct: 684 agagaaaaggccaattgaaacaccgaaaccacttaaagtaaagaaaggtggtttcaagaa 743 Query: 746 gcaacggaacaagaataaattcatcaagaagaatggccaagaagttaacgagggaaagga 805 | || ||||||||| |||||||| |||||| |||| |||| ||| | | || |||||| Sbjct: 744 gaaatggaacaagaggaaattcatgaagaaggatggtcaagctgttgatgtggaaaagga 803 Query: 806 tgagactggagtgcctggagatgctcatcattcagatgtcc 846 ||| || ||||| ||||||||||||| |||| ||||||| Sbjct: 804 tgaagctagagtggctggagatgctcacgattctgatgtcc 844 Score = 220 bits (111), Expect = 2e-53 Identities = 290/350 (82%), Gaps = 6/350 (1%) Strand = Plus / Plus Query: 145 gggttgagaattgctacgtcttcaagagcaggctgcaggagtacgtgcagaaagccggcc 204 |||||||||| |||||||||||||||||| ||||||| ||||| | |||||| |||||| Sbjct: 137 gggttgagaactgctacgtcttcaagagccggctgcaagagtatgcacagaaaaccggcc 196 Query: 205 tcatgacgccagagtaccaaaccctcaaggaggggccttcccatgcgccaatcttcagct 264 || ||| |||||||| || ||| |||||||||| |||||||| | ||| |||||| | Sbjct: 197 tccagactccagagtatcataccttcaaggagggaccttcccacgagcctgtcttcaagt 256 Query: 265 ccaccgtggtgattaacgacgtcaagtacgactcgctgcccgggttcttcagccggaagg 324 |||| ||||||||||| | || || ||||| |||||||| ||||||| | | |||| Sbjct: 257 ccacagtggtgattaataataccagctatgactccctgcccggattcttcaacagaaagg 316 Query: 325 ctgcagagcagtcggctgccgaagtagcgctcatggaaatcggcaagtctatggcgttac 384 ||||||| ||||| ||||| ||||| || ||||||||||| | |||||| || || Sbjct: 317 ctgcagaacagtctgctgctgaagttgccctcatggaaattgtcaagtccat------ac 370 Query: 385 caaccaatgcaaccatccctgcagtccaagaaactggtctgtgcaagaatcttcttcagg 444 || |||| |||| ||||| || || ||||| ||||| |||||||||||||||||||||| Sbjct: 371 cagccaacgcaaatatcccagctgttcaagagactgggctgtgcaagaatcttcttcagg 430 Query: 445 agtatgctcagaagatgaattatgctattccatcttatatttgcaacaaa 494 ||||||| ||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 431 agtatgcacagaagatgaattatgccattccatcttatatttgcaccaaa 480 Score = 50.1 bits (25), Expect = 0.032 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1308 gctgcaatggtgcaacctaatgatgaagctaga 1340 |||||| ||||||||||| |||||||||||||| Sbjct: 988 gctgcattggtgcaacctgatgatgaagctaga 1020 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1726 ttgaatcaaaatgcaatggccttccagt 1753 ||||||||||||||||| |||||||||| Sbjct: 1493 ttgaatcaaaatgcaatagccttccagt 1520 Score = 44.1 bits (22), Expect = 2.0 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1305 gatgctgcaatggtgcaacctaatgatgaagctagatgtgtaaagcagga 1354 ||||||||||| |||||||||| || |||||| | ||||||||||||| Sbjct: 1102 gatgctgcaattctgcaacctaaagaggaagcttcaagtgtaaagcagga 1151
>ref|NM_001061691.1| Oryza sativa (japonica cultivar-group) Os05g0307400 (Os05g0307400) mRNA, complete cds Length = 1903 Score = 244 bits (123), Expect = 1e-60 Identities = 285/339 (84%) Strand = Plus / Plus Query: 508 tatgcaccgtagagattggtggaatacaatacattggtgctacagcacggacaaagaaag 567 ||||||| ||||||||||||||||||||||| ||||||||| |||| | |||||||||| Sbjct: 793 tatgcactgtagagattggtggaatacaatatattggtgctgcagccagaacaaagaaag 852 Query: 568 aggcagagataaaagctgcccgaactgctcttcttgcaatccaaggccaatcagagggtt 627 | |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 853 atgcagagataaaagctgcccgaactgctcttctggcaatccaaggtcaatcagagggtt 912 Query: 628 gcgcgaatggtaccacaaaatatattgttgtgcctggaaaaaggcaaggtaaggacaccg 687 || |||||| | ||||||||||| || || ||||| |||||| ||||||||| | Sbjct: 913 ctgcaaatggtgcgacaaaatatatcgtagttcctggtaaaagggtaggtaaggaggtag 972 Query: 688 agaaaaagcccgttgaaactccaaaatcacttaagaccaagaaaggtggtttcaagaagc 747 | |||| ||| ||||||| || ||| ||||||| | ||||||||||||||||||||| Sbjct: 973 aaaaaaggccaattgaaacccccaaaccacttaaagcaaagaaaggtggtttcaagaaga 1032 Query: 748 aacggaacaagaataaattcatcaagaagaatggccaagaagttaacgagggaaaggatg 807 || ||||||||| |||||||| |||||| |||| |||| ||| | | | |||||||| Sbjct: 1033 aatggaacaagaggaaattcatgaagaaggatggtcaagctgttgatgttgaaaaggatg 1092 Query: 808 agactggagtgcctggagatgctcatcattcagatgtcc 846 | || ||||| |||||||||||||| |||| ||||||| Sbjct: 1093 aagctagagtggctggagatgctcatgattctgatgtcc 1131 Score = 238 bits (120), Expect = 6e-59 Identities = 293/351 (83%), Gaps = 6/351 (1%) Strand = Plus / Plus Query: 145 gggttgagaattgctacgtcttcaagagcaggctgcaggagtacgtgcagaaagccggcc 204 |||||||||| |||||||||||||||||| ||||||| ||||| | |||||||||||||| Sbjct: 424 gggttgagaactgctacgtcttcaagagccggctgcaagagtatgcgcagaaagccggcc 483 Query: 205 tcatgacgccagagtaccaaaccctcaaggaggggccttcccatgcgccaatcttcagct 264 || ||| |||||||| || ||| ||||||||| |||||||||| ||| |||||| | Sbjct: 484 tccagactccagagtatcatacctccaaggagggaccttcccatgagcctgtcttcaagt 543 Query: 265 ccaccgtggtgattaacgacgtcaagtacgactcgctgcccgggttcttcagccggaagg 324 |||| ||||||||||| || || || | ||| |||||||| |||| || | | |||| Sbjct: 544 ccacagtggtgattaataacaccagctatggctccctgcccggattctccaacagaaagg 603 Query: 325 ctgcagagcagtcggctgccgaagtagcgctcatggaaatcggcaagtctatggcgttac 384 ||||||| ||||| ||||| ||||| || ||||||||||| | |||||| || || Sbjct: 604 ctgcagaacagtctgctgctgaagttgccctcatggaaattgtcaagtccat------ac 657 Query: 385 caaccaatgcaaccatccctgcagtccaagaaactggtctgtgcaagaatcttcttcagg 444 || |||| |||| |||||| || || ||||| ||||| |||||||||||||||||||||| Sbjct: 658 cagccaacgcaaacatcccagctgttcaagagactgggctgtgcaagaatcttcttcagg 717 Query: 445 agtatgctcagaagatgaattatgctattccatcttatatttgcaacaaac 495 ||||||| ||||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 718 agtatgcacagaagatgaattatgccattccatcttatatttgcaccaaac 768 Score = 50.1 bits (25), Expect = 0.032 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1308 gctgcaatggtgcaacctaatgatgaagctaga 1340 |||||| ||||||||||| |||||||||||||| Sbjct: 1275 gctgcattggtgcaacctgatgatgaagctaga 1307
>dbj|AK072444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111A18, full insert sequence Length = 1903 Score = 244 bits (123), Expect = 1e-60 Identities = 285/339 (84%) Strand = Plus / Plus Query: 508 tatgcaccgtagagattggtggaatacaatacattggtgctacagcacggacaaagaaag 567 ||||||| ||||||||||||||||||||||| ||||||||| |||| | |||||||||| Sbjct: 793 tatgcactgtagagattggtggaatacaatatattggtgctgcagccagaacaaagaaag 852 Query: 568 aggcagagataaaagctgcccgaactgctcttcttgcaatccaaggccaatcagagggtt 627 | |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 853 atgcagagataaaagctgcccgaactgctcttctggcaatccaaggtcaatcagagggtt 912 Query: 628 gcgcgaatggtaccacaaaatatattgttgtgcctggaaaaaggcaaggtaaggacaccg 687 || |||||| | ||||||||||| || || ||||| |||||| ||||||||| | Sbjct: 913 ctgcaaatggtgcgacaaaatatatcgtagttcctggtaaaagggtaggtaaggaggtag 972 Query: 688 agaaaaagcccgttgaaactccaaaatcacttaagaccaagaaaggtggtttcaagaagc 747 | |||| ||| ||||||| || ||| ||||||| | ||||||||||||||||||||| Sbjct: 973 aaaaaaggccaattgaaacccccaaaccacttaaagcaaagaaaggtggtttcaagaaga 1032 Query: 748 aacggaacaagaataaattcatcaagaagaatggccaagaagttaacgagggaaaggatg 807 || ||||||||| |||||||| |||||| |||| |||| ||| | | | |||||||| Sbjct: 1033 aatggaacaagaggaaattcatgaagaaggatggtcaagctgttgatgttgaaaaggatg 1092 Query: 808 agactggagtgcctggagatgctcatcattcagatgtcc 846 | || ||||| |||||||||||||| |||| ||||||| Sbjct: 1093 aagctagagtggctggagatgctcatgattctgatgtcc 1131 Score = 238 bits (120), Expect = 6e-59 Identities = 293/351 (83%), Gaps = 6/351 (1%) Strand = Plus / Plus Query: 145 gggttgagaattgctacgtcttcaagagcaggctgcaggagtacgtgcagaaagccggcc 204 |||||||||| |||||||||||||||||| ||||||| ||||| | |||||||||||||| Sbjct: 424 gggttgagaactgctacgtcttcaagagccggctgcaagagtatgcgcagaaagccggcc 483 Query: 205 tcatgacgccagagtaccaaaccctcaaggaggggccttcccatgcgccaatcttcagct 264 || ||| |||||||| || ||| ||||||||| |||||||||| ||| |||||| | Sbjct: 484 tccagactccagagtatcatacctccaaggagggaccttcccatgagcctgtcttcaagt 543 Query: 265 ccaccgtggtgattaacgacgtcaagtacgactcgctgcccgggttcttcagccggaagg 324 |||| ||||||||||| || || || | ||| |||||||| |||| || | | |||| Sbjct: 544 ccacagtggtgattaataacaccagctatggctccctgcccggattctccaacagaaagg 603 Query: 325 ctgcagagcagtcggctgccgaagtagcgctcatggaaatcggcaagtctatggcgttac 384 ||||||| ||||| ||||| ||||| || ||||||||||| | |||||| || || Sbjct: 604 ctgcagaacagtctgctgctgaagttgccctcatggaaattgtcaagtccat------ac 657 Query: 385 caaccaatgcaaccatccctgcagtccaagaaactggtctgtgcaagaatcttcttcagg 444 || |||| |||| |||||| || || ||||| ||||| |||||||||||||||||||||| Sbjct: 658 cagccaacgcaaacatcccagctgttcaagagactgggctgtgcaagaatcttcttcagg 717 Query: 445 agtatgctcagaagatgaattatgctattccatcttatatttgcaacaaac 495 ||||||| ||||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 718 agtatgcacagaagatgaattatgccattccatcttatatttgcaccaaac 768 Score = 50.1 bits (25), Expect = 0.032 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1308 gctgcaatggtgcaacctaatgatgaagctaga 1340 |||||| ||||||||||| |||||||||||||| Sbjct: 1275 gctgcattggtgcaacctgatgatgaagctaga 1307
>dbj|AB036988.1| Oryza sativa (japonica cultivar-group) mRNA for dsRNA-binding protein ODB1, complete cds Length = 1772 Score = 222 bits (112), Expect = 4e-54 Identities = 289/344 (84%), Gaps = 3/344 (0%) Strand = Plus / Plus Query: 506 catatgcaccgtagagatt-ggtgg-aatacaa-tacattggtgctacagcacggacaaa 562 ||||||||| ||||||||| ||||| ||||||| || ||||||||| |||| ||||||| Sbjct: 503 catatgcactgtagagatttggtgggaatacaaatatattggtgctgcagccaggacaaa 562 Query: 563 gaaagaggcagagataaaagctgcccgaactgctcttcttgcaatccaaggccaatcaga 622 |||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 563 gaaagatgcagagataaaagctgcccgaactgctcttctggcaatccaaggtcaatcaga 622 Query: 623 gggttgcgcgaatggtaccacaaaatatattgttgtgcctggaaaaaggcaaggtaagga 682 ||||| || |||||| | |||||||||||||| || ||||| |||||| ||||||||| Sbjct: 623 gggttcggcaaatggtgcaacaaaatatattgtagttcctggtaaaagggtaggtaagga 682 Query: 683 caccgagaaaaagcccgttgaaactccaaaatcacttaagaccaagaaaggtggtttcaa 742 ||||||| ||| ||||||| || ||| ||||||| ||||||||||||||||| Sbjct: 683 ggtagagaaaaggccaattgaaacaccgaaaccacttaaagtaaagaaaggtggtttcaa 742 Query: 743 gaagcaacggaacaagaataaattcatcaagaagaatggccaagaagttaacgagggaaa 802 |||| || ||||||||| |||||||| |||||| |||| |||| ||| | | || ||| Sbjct: 743 gaagaaatggaacaagaggaaattcatgaagaaggatggtcaagctgttgatgtggaaaa 802 Query: 803 ggatgagactggagtgcctggagatgctcatcattcagatgtcc 846 |||||| || ||||| ||||||||||||| |||| ||||||| Sbjct: 803 ggatgaagctagagtggctggagatgctcacgattctgatgtcc 846 Score = 220 bits (111), Expect = 2e-53 Identities = 290/350 (82%), Gaps = 6/350 (1%) Strand = Plus / Plus Query: 145 gggttgagaattgctacgtcttcaagagcaggctgcaggagtacgtgcagaaagccggcc 204 |||||||||| |||||||||||||||||| ||||||| ||||| | |||||| |||||| Sbjct: 136 gggttgagaactgctacgtcttcaagagccggctgcaagagtatgcacagaaaaccggcc 195 Query: 205 tcatgacgccagagtaccaaaccctcaaggaggggccttcccatgcgccaatcttcagct 264 || ||| |||||||| || ||| |||||||||| |||||||| | ||| |||||| | Sbjct: 196 tccagactccagagtatcataccttcaaggagggaccttcccacgagcctgtcttcaagt 255 Query: 265 ccaccgtggtgattaacgacgtcaagtacgactcgctgcccgggttcttcagccggaagg 324 |||| ||||||||||| | || || ||||| |||||||| ||||||| | | |||| Sbjct: 256 ccacagtggtgattaataataccagctatgactccctgcccggattcttcaacagaaagg 315 Query: 325 ctgcagagcagtcggctgccgaagtagcgctcatggaaatcggcaagtctatggcgttac 384 ||||||| ||||| ||||| ||||| || ||||||||||| | |||||| || || Sbjct: 316 ctgcagaacagtctgctgctgaagttgccctcatggaaattgtcaagtccat------ac 369 Query: 385 caaccaatgcaaccatccctgcagtccaagaaactggtctgtgcaagaatcttcttcagg 444 || |||| |||| ||||| || || ||||| ||||| |||||||||||||||||||||| Sbjct: 370 cagccaacgcaaatatcccagctgttcaagagactgggctgtgcaagaatcttcttcagg 429 Query: 445 agtatgctcagaagatgaattatgctattccatcttatatttgcaacaaa 494 ||||||| ||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 430 agtatgcacagaagatgaattatgccattccatcttatatttgcaccaaa 479 Score = 50.1 bits (25), Expect = 0.032 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1308 gctgcaatggtgcaacctaatgatgaagctaga 1340 |||||| ||||||||||| |||||||||||||| Sbjct: 990 gctgcattggtgcaacctgatgatgaagctaga 1022 Score = 50.1 bits (25), Expect = 0.032 Identities = 61/73 (83%) Strand = Plus / Plus Query: 1305 gatgctgcaatggtgcaacctaatgatgaagctagatgtgtaaagcaggagctactaatt 1364 ||||||||||| |||||||||| || |||||| | ||||||||||||||| | | || Sbjct: 1104 gatgctgcaattctgcaacctaaagaggaagcttcaagtgtaaagcaggagccattcatc 1163 Query: 1365 gacactgcaatgc 1377 || |||||||||| Sbjct: 1164 gatactgcaatgc 1176 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1726 ttgaatcaaaatgcaatggccttccagt 1753 ||||||||||||||||| |||||||||| Sbjct: 1495 ttgaatcaaaatgcaatagccttccagt 1522
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 161 bits (81), Expect = 1e-35 Identities = 192/229 (83%) Strand = Plus / Minus Query: 145 gggttgagaattgctacgtcttcaagagcaggctgcaggagtacgtgcagaaagccggcc 204 |||||||||| |||||||||||||||||| ||||||| ||||| | |||||||||||||| Sbjct: 460183 gggttgagaactgctacgtcttcaagagccggctgcaagagtatgcgcagaaagccggcc 460124 Query: 205 tcatgacgccagagtaccaaaccctcaaggaggggccttcccatgcgccaatcttcagct 264 || ||| |||||||| || ||| |||||||||| |||||||||| ||| |||||| | Sbjct: 460123 tccagactccagagtatcataccttcaaggagggaccttcccatgagcctgtcttcaagt 460064 Query: 265 ccaccgtggtgattaacgacgtcaagtacgactcgctgcccgggttcttcagccggaagg 324 |||| ||||||||||| || || || ||||| |||||||| ||||||| | | |||| Sbjct: 460063 ccacagtggtgattaataacaccagctatgactccctgcccggattcttcaacagaaagg 460004 Query: 325 ctgcagagcagtcggctgccgaagtagcgctcatggaaatcggcaagtc 373 ||||||| ||||| ||||| ||||| || ||||||||||| | |||||| Sbjct: 460003 ctgcagaacagtctgctgctgaagttgccctcatggaaattgtcaagtc 459955 Score = 135 bits (68), Expect = 7e-28 Identities = 98/108 (90%) Strand = Plus / Minus Query: 506 catatgcaccgtagagattggtggaatacaatacattggtgctacagcacggacaaagaa 565 ||||||||| ||||||||||||||||||||||| ||||||||| |||| | |||||||| Sbjct: 457640 catatgcactgtagagattggtggaatacaatatattggtgctgcagccagaacaaagaa 457581 Query: 566 agaggcagagataaaagctgcccgaactgctcttcttgcaatccaagg 613 ||| ||||||||||||||||| |||||||||||||| ||||| ||||| Sbjct: 457580 agatgcagagataaaagctgctcgaactgctcttctggcaattcaagg 457533 Score = 127 bits (64), Expect = 2e-25 Identities = 79/84 (94%) Strand = Plus / Minus Query: 411 caagaaactggtctgtgcaagaatcttcttcaggagtatgctcagaagatgaattatgct 470 ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 457747 caagagactgggctgtgcaagaatcttcttcaggagtatgcacagaagatgaattatgcc 457688 Query: 471 attccatcttatatttgcaacaaa 494 ||||||||||||||||||| |||| Sbjct: 457687 attccatcttatatttgcaccaaa 457664 Score = 103 bits (52), Expect = 2e-18 Identities = 142/172 (82%) Strand = Plus / Minus Query: 615 caatcagagggttgcgcgaatggtaccacaaaatatattgttgtgcctggaaaaaggcaa 674 ||||||||||||| || |||||| | |||||||||||||| || ||||| |||||| | Sbjct: 457387 caatcagagggttctgcaaatggtgcgacaaaatatattgtagttcctggtaaaagggta 457328 Query: 675 ggtaaggacaccgagaaaaagcccgttgaaactccaaaatcacttaagaccaagaaaggt 734 |||||||| ||||||| ||| ||||||| || ||| ||||||| | ||||||||| Sbjct: 457327 ggtaaggaggtagagaaaatgccaattgaaacccccaaaccacttaaaataaagaaaggt 457268 Query: 735 ggtttcaagaagcaacggaacaagaataaattcatcaagaagaatggccaag 786 |||||||||||| || ||||||||| |||||||| |||||| |||| |||| Sbjct: 457267 ggtttcaagaagaaatggaacaagaggaaattcatgaagaaggatggtcaag 457216 Score = 50.1 bits (25), Expect = 0.032 Identities = 61/73 (83%) Strand = Plus / Minus Query: 1305 gatgctgcaatggtgcaacctaatgatgaagctagatgtgtaaagcaggagctactaatt 1364 ||||||||||| |||||||||| || |||||| | ||||||||||||||| | | || Sbjct: 456901 gatgctgcaattctgcaacctaaagaggaagcttcaagtgtaaagcaggagccattcatc 456842 Query: 1365 gacactgcaatgc 1377 || |||||||||| Sbjct: 456841 gatactgcaatgc 456829 Score = 50.1 bits (25), Expect = 0.032 Identities = 31/33 (93%) Strand = Plus / Minus Query: 1308 gctgcaatggtgcaacctaatgatgaagctaga 1340 |||||| ||||||||||| |||||||||||||| Sbjct: 457015 gctgcattggtgcaacctgatgatgaagctaga 456983 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Minus Query: 99 gccaacacgtcgcccgctcccaacggcg 126 |||||||| ||||||||||||||||||| Sbjct: 460561 gccaacacctcgcccgctcccaacggcg 460534
>emb|BX000493.1|CNS08CDJ Oryza sativa chromosome 11, . BAC OSJNBb0037D03 of library OSJNBb from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130544 Score = 161 bits (81), Expect = 1e-35 Identities = 192/229 (83%) Strand = Plus / Plus Query: 145 gggttgagaattgctacgtcttcaagagcaggctgcaggagtacgtgcagaaagccggcc 204 |||||||||| |||||||||||||||||| ||||||| ||||| | |||||||||||||| Sbjct: 110129 gggttgagaactgctacgtcttcaagagccggctgcaagagtatgcgcagaaagccggcc 110188 Query: 205 tcatgacgccagagtaccaaaccctcaaggaggggccttcccatgcgccaatcttcagct 264 || ||| |||||||| || ||| |||||||||| |||||||||| ||| |||||| | Sbjct: 110189 tccagactccagagtatcataccttcaaggagggaccttcccatgagcctgtcttcaagt 110248 Query: 265 ccaccgtggtgattaacgacgtcaagtacgactcgctgcccgggttcttcagccggaagg 324 |||| ||||||||||| || || || ||||| |||||||| ||||||| | | |||| Sbjct: 110249 ccacagtggtgattaataacaccagctatgactccctgcccggattcttcaacagaaagg 110308 Query: 325 ctgcagagcagtcggctgccgaagtagcgctcatggaaatcggcaagtc 373 ||||||| ||||| ||||| ||||| || ||||||||||| | |||||| Sbjct: 110309 ctgcagaacagtctgctgctgaagttgccctcatggaaattgtcaagtc 110357 Score = 135 bits (68), Expect = 7e-28 Identities = 98/108 (90%) Strand = Plus / Plus Query: 506 catatgcaccgtagagattggtggaatacaatacattggtgctacagcacggacaaagaa 565 ||||||||| ||||||||||||||||||||||| ||||||||| |||| | |||||||| Sbjct: 112672 catatgcactgtagagattggtggaatacaatatattggtgctgcagccagaacaaagaa 112731 Query: 566 agaggcagagataaaagctgcccgaactgctcttcttgcaatccaagg 613 ||| ||||||||||||||||| |||||||||||||| ||||| ||||| Sbjct: 112732 agatgcagagataaaagctgctcgaactgctcttctggcaattcaagg 112779 Score = 127 bits (64), Expect = 2e-25 Identities = 79/84 (94%) Strand = Plus / Plus Query: 411 caagaaactggtctgtgcaagaatcttcttcaggagtatgctcagaagatgaattatgct 470 ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 112565 caagagactgggctgtgcaagaatcttcttcaggagtatgcacagaagatgaattatgcc 112624 Query: 471 attccatcttatatttgcaacaaa 494 ||||||||||||||||||| |||| Sbjct: 112625 attccatcttatatttgcaccaaa 112648 Score = 103 bits (52), Expect = 2e-18 Identities = 142/172 (82%) Strand = Plus / Plus Query: 615 caatcagagggttgcgcgaatggtaccacaaaatatattgttgtgcctggaaaaaggcaa 674 ||||||||||||| || |||||| | |||||||||||||| || ||||| |||||| | Sbjct: 112925 caatcagagggttctgcaaatggtgcgacaaaatatattgtagttcctggtaaaagggta 112984 Query: 675 ggtaaggacaccgagaaaaagcccgttgaaactccaaaatcacttaagaccaagaaaggt 734 |||||||| ||||||| ||| ||||||| || ||| ||||||| | ||||||||| Sbjct: 112985 ggtaaggaggtagagaaaatgccaattgaaacccccaaaccacttaaaataaagaaaggt 113044 Query: 735 ggtttcaagaagcaacggaacaagaataaattcatcaagaagaatggccaag 786 |||||||||||| || ||||||||| |||||||| |||||| |||| |||| Sbjct: 113045 ggtttcaagaagaaatggaacaagaggaaattcatgaagaaggatggtcaag 113096 Score = 50.1 bits (25), Expect = 0.032 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1308 gctgcaatggtgcaacctaatgatgaagctaga 1340 |||||| ||||||||||| |||||||||||||| Sbjct: 113297 gctgcattggtgcaacctgatgatgaagctaga 113329 Score = 50.1 bits (25), Expect = 0.032 Identities = 61/73 (83%) Strand = Plus / Plus Query: 1305 gatgctgcaatggtgcaacctaatgatgaagctagatgtgtaaagcaggagctactaatt 1364 ||||||||||| |||||||||| || |||||| | ||||||||||||||| | | || Sbjct: 113411 gatgctgcaattctgcaacctaaagaggaagcttcaagtgtaaagcaggagccattcatc 113470 Query: 1365 gacactgcaatgc 1377 || |||||||||| Sbjct: 113471 gatactgcaatgc 113483 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 99 gccaacacgtcgcccgctcccaacggcg 126 |||||||| ||||||||||||||||||| Sbjct: 109751 gccaacacctcgcccgctcccaacggcg 109778
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 159 bits (80), Expect = 5e-35 Identities = 101/108 (93%) Strand = Plus / Minus Query: 506 catatgcaccgtagagattggtggaatacaatacattggtgctacagcacggacaaagaa 565 ||||||||| ||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 536332 catatgcactgtagagattggtggaatacaatatattggtgctgcagccaggacaaagaa 536273 Query: 566 agaggcagagataaaagctgcccgaactgctcttcttgcaatccaagg 613 ||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 536272 agatgcagagataaaagctgcccgaactgctcttctggcaatccaagg 536225 Score = 129 bits (65), Expect = 4e-26 Identities = 188/229 (82%) Strand = Plus / Minus Query: 145 gggttgagaattgctacgtcttcaagagcaggctgcaggagtacgtgcagaaagccggcc 204 |||||||||| |||||||||||||||||| ||||||| ||||| | |||||| |||||| Sbjct: 538860 gggttgagaactgctacgtcttcaagagccggctgcaagagtatgcacagaaaaccggcc 538801 Query: 205 tcatgacgccagagtaccaaaccctcaaggaggggccttcccatgcgccaatcttcagct 264 || ||| |||||||| || ||| |||||||||| |||||||| | ||| |||||| | Sbjct: 538800 tccagactccagagtatcataccttcaaggagggaccttcccacgagcctgtcttcaagt 538741 Query: 265 ccaccgtggtgattaacgacgtcaagtacgactcgctgcccgggttcttcagccggaagg 324 |||| ||||||||||| | || || ||||| |||||||| ||||||| | | |||| Sbjct: 538740 ccacagtggtgattaataataccagctatgactccctgcccggattcttcaacagaaagg 538681 Query: 325 ctgcagagcagtcggctgccgaagtagcgctcatggaaatcggcaagtc 373 ||||||| ||||| ||||| ||||| || ||||||||||| | |||||| Sbjct: 538680 ctgcagaacagtctgctgctgaagttgccctcatggaaattgtcaagtc 538632 Score = 127 bits (64), Expect = 2e-25 Identities = 79/84 (94%) Strand = Plus / Minus Query: 411 caagaaactggtctgtgcaagaatcttcttcaggagtatgctcagaagatgaattatgct 470 ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 536439 caagagactgggctgtgcaagaatcttcttcaggagtatgcacagaagatgaattatgcc 536380 Query: 471 attccatcttatatttgcaacaaa 494 ||||||||||||||||||| |||| Sbjct: 536379 attccatcttatatttgcaccaaa 536356 Score = 111 bits (56), Expect = 1e-20 Identities = 188/232 (81%) Strand = Plus / Minus Query: 615 caatcagagggttgcgcgaatggtaccacaaaatatattgttgtgcctggaaaaaggcaa 674 ||||||||||||| || |||||| | |||||||||||||| || ||||| |||||| | Sbjct: 536083 caatcagagggttcggcaaatggtgcaacaaaatatattgtagttcctggtaaaagggta 536024 Query: 675 ggtaaggacaccgagaaaaagcccgttgaaactccaaaatcacttaagaccaagaaaggt 734 |||||||| ||||||| ||| ||||||| || ||| ||||||| ||||||||| Sbjct: 536023 ggtaaggaggtagagaaaaggccaattgaaacaccgaaaccacttaaagtaaagaaaggt 535964 Query: 735 ggtttcaagaagcaacggaacaagaataaattcatcaagaagaatggccaagaagttaac 794 |||||||||||| || ||||||||| |||||||| |||||| |||| |||| ||| | Sbjct: 535963 ggtttcaagaagaaatggaacaagaggaaattcatgaagaaggatggtcaagctgttgat 535904 Query: 795 gagggaaaggatgagactggagtgcctggagatgctcatcattcagatgtcc 846 | || ||||||||| || ||||| ||||||||||||| |||| ||||||| Sbjct: 535903 gtggaaaaggatgaagctagagtggctggagatgctcacgattctgatgtcc 535852 Score = 50.1 bits (25), Expect = 0.032 Identities = 61/73 (83%) Strand = Plus / Minus Query: 1305 gatgctgcaatggtgcaacctaatgatgaagctagatgtgtaaagcaggagctactaatt 1364 ||||||||||| |||||||||| || |||||| | ||||||||||||||| | | || Sbjct: 535594 gatgctgcaattctgcaacctaaagaggaagcttcaagtgtaaagcaggagccattcatc 535535 Query: 1365 gacactgcaatgc 1377 || |||||||||| Sbjct: 535534 gatactgcaatgc 535522 Score = 50.1 bits (25), Expect = 0.032 Identities = 31/33 (93%) Strand = Plus / Minus Query: 1308 gctgcaatggtgcaacctaatgatgaagctaga 1340 |||||| ||||||||||| |||||||||||||| Sbjct: 535708 gctgcattggtgcaacctgatgatgaagctaga 535676 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Minus Query: 1726 ttgaatcaaaatgcaatggccttccagt 1753 ||||||||||||||||| |||||||||| Sbjct: 535203 ttgaatcaaaatgcaatagccttccagt 535176 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Minus Query: 99 gccaacacgtcgcccgctcccaacggcg 126 |||||||| ||||||||||||||||||| Sbjct: 539243 gccaacacctcgcccgctcccaacggcg 539216
>emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141089 Score = 159 bits (80), Expect = 5e-35 Identities = 101/108 (93%) Strand = Plus / Plus Query: 506 catatgcaccgtagagattggtggaatacaatacattggtgctacagcacggacaaagaa 565 ||||||||| ||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 10440 catatgcactgtagagattggtggaatacaatatattggtgctgcagccaggacaaagaa 10499 Query: 566 agaggcagagataaaagctgcccgaactgctcttcttgcaatccaagg 613 ||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 10500 agatgcagagataaaagctgcccgaactgctcttctggcaatccaagg 10547 Score = 129 bits (65), Expect = 4e-26 Identities = 188/229 (82%) Strand = Plus / Plus Query: 145 gggttgagaattgctacgtcttcaagagcaggctgcaggagtacgtgcagaaagccggcc 204 |||||||||| |||||||||||||||||| ||||||| ||||| | |||||| |||||| Sbjct: 7912 gggttgagaactgctacgtcttcaagagccggctgcaagagtatgcacagaaaaccggcc 7971 Query: 205 tcatgacgccagagtaccaaaccctcaaggaggggccttcccatgcgccaatcttcagct 264 || ||| |||||||| || ||| |||||||||| |||||||| | ||| |||||| | Sbjct: 7972 tccagactccagagtatcataccttcaaggagggaccttcccacgagcctgtcttcaagt 8031 Query: 265 ccaccgtggtgattaacgacgtcaagtacgactcgctgcccgggttcttcagccggaagg 324 |||| ||||||||||| | || || ||||| |||||||| ||||||| | | |||| Sbjct: 8032 ccacagtggtgattaataataccagctatgactccctgcccggattcttcaacagaaagg 8091 Query: 325 ctgcagagcagtcggctgccgaagtagcgctcatggaaatcggcaagtc 373 ||||||| ||||| ||||| ||||| || ||||||||||| | |||||| Sbjct: 8092 ctgcagaacagtctgctgctgaagttgccctcatggaaattgtcaagtc 8140 Score = 127 bits (64), Expect = 2e-25 Identities = 79/84 (94%) Strand = Plus / Plus Query: 411 caagaaactggtctgtgcaagaatcttcttcaggagtatgctcagaagatgaattatgct 470 ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10333 caagagactgggctgtgcaagaatcttcttcaggagtatgcacagaagatgaattatgcc 10392 Query: 471 attccatcttatatttgcaacaaa 494 ||||||||||||||||||| |||| Sbjct: 10393 attccatcttatatttgcaccaaa 10416 Score = 111 bits (56), Expect = 1e-20 Identities = 188/232 (81%) Strand = Plus / Plus Query: 615 caatcagagggttgcgcgaatggtaccacaaaatatattgttgtgcctggaaaaaggcaa 674 ||||||||||||| || |||||| | |||||||||||||| || ||||| |||||| | Sbjct: 10689 caatcagagggttcggcaaatggtgcaacaaaatatattgtagttcctggtaaaagggta 10748 Query: 675 ggtaaggacaccgagaaaaagcccgttgaaactccaaaatcacttaagaccaagaaaggt 734 |||||||| ||||||| ||| ||||||| || ||| ||||||| ||||||||| Sbjct: 10749 ggtaaggaggtagagaaaaggccaattgaaacaccgaaaccacttaaagtaaagaaaggt 10808 Query: 735 ggtttcaagaagcaacggaacaagaataaattcatcaagaagaatggccaagaagttaac 794 |||||||||||| || ||||||||| |||||||| |||||| |||| |||| ||| | Sbjct: 10809 ggtttcaagaagaaatggaacaagaggaaattcatgaagaaggatggtcaagctgttgat 10868 Query: 795 gagggaaaggatgagactggagtgcctggagatgctcatcattcagatgtcc 846 | || ||||||||| || ||||| ||||||||||||| |||| ||||||| Sbjct: 10869 gtggaaaaggatgaagctagagtggctggagatgctcacgattctgatgtcc 10920 Score = 50.1 bits (25), Expect = 0.032 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1308 gctgcaatggtgcaacctaatgatgaagctaga 1340 |||||| ||||||||||| |||||||||||||| Sbjct: 11064 gctgcattggtgcaacctgatgatgaagctaga 11096 Score = 50.1 bits (25), Expect = 0.032 Identities = 61/73 (83%) Strand = Plus / Plus Query: 1305 gatgctgcaatggtgcaacctaatgatgaagctagatgtgtaaagcaggagctactaatt 1364 ||||||||||| |||||||||| || |||||| | ||||||||||||||| | | || Sbjct: 11178 gatgctgcaattctgcaacctaaagaggaagcttcaagtgtaaagcaggagccattcatc 11237 Query: 1365 gacactgcaatgc 1377 || |||||||||| Sbjct: 11238 gatactgcaatgc 11250 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 99 gccaacacgtcgcccgctcccaacggcg 126 |||||||| ||||||||||||||||||| Sbjct: 7529 gccaacacctcgcccgctcccaacggcg 7556 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1726 ttgaatcaaaatgcaatggccttccagt 1753 ||||||||||||||||| |||||||||| Sbjct: 11569 ttgaatcaaaatgcaatagccttccagt 11596
>emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC OJ1769_D07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 115859 Score = 159 bits (80), Expect = 5e-35 Identities = 101/108 (93%) Strand = Plus / Plus Query: 506 catatgcaccgtagagattggtggaatacaatacattggtgctacagcacggacaaagaa 565 ||||||||| ||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 112511 catatgcactgtagagattggtggaatacaatatattggtgctgcagccaggacaaagaa 112570 Query: 566 agaggcagagataaaagctgcccgaactgctcttcttgcaatccaagg 613 ||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 112571 agatgcagagataaaagctgcccgaactgctcttctggcaatccaagg 112618 Score = 129 bits (65), Expect = 4e-26 Identities = 188/229 (82%) Strand = Plus / Plus Query: 145 gggttgagaattgctacgtcttcaagagcaggctgcaggagtacgtgcagaaagccggcc 204 |||||||||| |||||||||||||||||| ||||||| ||||| | |||||| |||||| Sbjct: 109983 gggttgagaactgctacgtcttcaagagccggctgcaagagtatgcacagaaaaccggcc 110042 Query: 205 tcatgacgccagagtaccaaaccctcaaggaggggccttcccatgcgccaatcttcagct 264 || ||| |||||||| || ||| |||||||||| |||||||| | ||| |||||| | Sbjct: 110043 tccagactccagagtatcataccttcaaggagggaccttcccacgagcctgtcttcaagt 110102 Query: 265 ccaccgtggtgattaacgacgtcaagtacgactcgctgcccgggttcttcagccggaagg 324 |||| ||||||||||| | || || ||||| |||||||| ||||||| | | |||| Sbjct: 110103 ccacagtggtgattaataataccagctatgactccctgcccggattcttcaacagaaagg 110162 Query: 325 ctgcagagcagtcggctgccgaagtagcgctcatggaaatcggcaagtc 373 ||||||| ||||| ||||| ||||| || ||||||||||| | |||||| Sbjct: 110163 ctgcagaacagtctgctgctgaagttgccctcatggaaattgtcaagtc 110211 Score = 127 bits (64), Expect = 2e-25 Identities = 79/84 (94%) Strand = Plus / Plus Query: 411 caagaaactggtctgtgcaagaatcttcttcaggagtatgctcagaagatgaattatgct 470 ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 112404 caagagactgggctgtgcaagaatcttcttcaggagtatgcacagaagatgaattatgcc 112463 Query: 471 attccatcttatatttgcaacaaa 494 ||||||||||||||||||| |||| Sbjct: 112464 attccatcttatatttgcaccaaa 112487 Score = 111 bits (56), Expect = 1e-20 Identities = 188/232 (81%) Strand = Plus / Plus Query: 615 caatcagagggttgcgcgaatggtaccacaaaatatattgttgtgcctggaaaaaggcaa 674 ||||||||||||| || |||||| | |||||||||||||| || ||||| |||||| | Sbjct: 112760 caatcagagggttcggcaaatggtgcaacaaaatatattgtagttcctggtaaaagggta 112819 Query: 675 ggtaaggacaccgagaaaaagcccgttgaaactccaaaatcacttaagaccaagaaaggt 734 |||||||| ||||||| ||| ||||||| || ||| ||||||| ||||||||| Sbjct: 112820 ggtaaggaggtagagaaaaggccaattgaaacaccgaaaccacttaaagtaaagaaaggt 112879 Query: 735 ggtttcaagaagcaacggaacaagaataaattcatcaagaagaatggccaagaagttaac 794 |||||||||||| || ||||||||| |||||||| |||||| |||| |||| ||| | Sbjct: 112880 ggtttcaagaagaaatggaacaagaggaaattcatgaagaaggatggtcaagctgttgat 112939 Query: 795 gagggaaaggatgagactggagtgcctggagatgctcatcattcagatgtcc 846 | || ||||||||| || ||||| ||||||||||||| |||| ||||||| Sbjct: 112940 gtggaaaaggatgaagctagagtggctggagatgctcacgattctgatgtcc 112991 Score = 50.1 bits (25), Expect = 0.032 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1308 gctgcaatggtgcaacctaatgatgaagctaga 1340 |||||| ||||||||||| |||||||||||||| Sbjct: 113135 gctgcattggtgcaacctgatgatgaagctaga 113167 Score = 50.1 bits (25), Expect = 0.032 Identities = 61/73 (83%) Strand = Plus / Plus Query: 1305 gatgctgcaatggtgcaacctaatgatgaagctagatgtgtaaagcaggagctactaatt 1364 ||||||||||| |||||||||| || |||||| | ||||||||||||||| | | || Sbjct: 113249 gatgctgcaattctgcaacctaaagaggaagcttcaagtgtaaagcaggagccattcatc 113308 Query: 1365 gacactgcaatgc 1377 || |||||||||| Sbjct: 113309 gatactgcaatgc 113321 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 99 gccaacacgtcgcccgctcccaacggcg 126 |||||||| ||||||||||||||||||| Sbjct: 109600 gccaacacctcgcccgctcccaacggcg 109627 Score = 48.1 bits (24), Expect = 0.13 Identities = 27/28 (96%) Strand = Plus / Plus Query: 1726 ttgaatcaaaatgcaatggccttccagt 1753 ||||||||||||||||| |||||||||| Sbjct: 113640 ttgaatcaaaatgcaatagccttccagt 113667
>gb|AC137622.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0118N20, complete sequence Length = 146139 Score = 147 bits (74), Expect = 2e-31 Identities = 98/106 (92%) Strand = Plus / Minus Query: 508 tatgcaccgtagagattggtggaatacaatacattggtgctacagcacggacaaagaaag 567 ||||||| ||||||||||||||||||||||| ||||||||| |||| | |||||||||| Sbjct: 75728 tatgcactgtagagattggtggaatacaatatattggtgctgcagccagaacaaagaaag 75669 Query: 568 aggcagagataaaagctgcccgaactgctcttcttgcaatccaagg 613 | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 75668 atgcagagataaaagctgcccgaactgctcttctggcaatccaagg 75623 Score = 137 bits (69), Expect = 2e-28 Identities = 189/229 (82%) Strand = Plus / Minus Query: 145 gggttgagaattgctacgtcttcaagagcaggctgcaggagtacgtgcagaaagccggcc 204 |||||||||| |||||||||||||||||| ||||||| ||||| | |||||||||||||| Sbjct: 78406 gggttgagaactgctacgtcttcaagagccggctgcaagagtatgcgcagaaagccggcc 78347 Query: 205 tcatgacgccagagtaccaaaccctcaaggaggggccttcccatgcgccaatcttcagct 264 || ||| |||||||| || ||| ||||||||| |||||||||| ||| |||||| | Sbjct: 78346 tccagactccagagtatcatacctccaaggagggaccttcccatgagcctgtcttcaagt 78287 Query: 265 ccaccgtggtgattaacgacgtcaagtacgactcgctgcccgggttcttcagccggaagg 324 |||| ||||||||||| || || || | ||| |||||||| |||| || | | |||| Sbjct: 78286 ccacagtggtgattaataacaccagctatggctccctgcccggattctccaacagaaagg 78227 Query: 325 ctgcagagcagtcggctgccgaagtagcgctcatggaaatcggcaagtc 373 ||||||| ||||| ||||| ||||| || ||||||||||| | |||||| Sbjct: 78226 ctgcagaacagtctgctgctgaagttgccctcatggaaattgtcaagtc 78178 Score = 129 bits (65), Expect = 4e-26 Identities = 80/85 (94%) Strand = Plus / Minus Query: 411 caagaaactggtctgtgcaagaatcttcttcaggagtatgctcagaagatgaattatgct 470 ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 75837 caagagactgggctgtgcaagaatcttcttcaggagtatgcacagaagatgaattatgcc 75778 Query: 471 attccatcttatatttgcaacaaac 495 ||||||||||||||||||| ||||| Sbjct: 75777 attccatcttatatttgcaccaaac 75753 Score = 103 bits (52), Expect = 2e-18 Identities = 187/232 (80%) Strand = Plus / Minus Query: 615 caatcagagggttgcgcgaatggtaccacaaaatatattgttgtgcctggaaaaaggcaa 674 ||||||||||||| || |||||| | ||||||||||| || || ||||| |||||| | Sbjct: 75484 caatcagagggttctgcaaatggtgcgacaaaatatatcgtagttcctggtaaaagggta 75425 Query: 675 ggtaaggacaccgagaaaaagcccgttgaaactccaaaatcacttaagaccaagaaaggt 734 |||||||| || |||| ||| ||||||| || ||| ||||||| | ||||||||| Sbjct: 75424 ggtaaggaggtagaaaaaaggccaattgaaacccccaaaccacttaaagcaaagaaaggt 75365 Query: 735 ggtttcaagaagcaacggaacaagaataaattcatcaagaagaatggccaagaagttaac 794 |||||||||||| || ||||||||| |||||||| |||||| |||| |||| ||| | Sbjct: 75364 ggtttcaagaagaaatggaacaagaggaaattcatgaagaaggatggtcaagctgttgat 75305 Query: 795 gagggaaaggatgagactggagtgcctggagatgctcatcattcagatgtcc 846 | | ||||||||| || ||||| |||||||||||||| |||| ||||||| Sbjct: 75304 gttgaaaaggatgaagctagagtggctggagatgctcatgattctgatgtcc 75253 Score = 50.1 bits (25), Expect = 0.032 Identities = 31/33 (93%) Strand = Plus / Minus Query: 1308 gctgcaatggtgcaacctaatgatgaagctaga 1340 |||||| ||||||||||| |||||||||||||| Sbjct: 75109 gctgcattggtgcaacctgatgatgaagctaga 75077
>gb|AC135430.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0671E09, complete sequence Length = 158472 Score = 147 bits (74), Expect = 2e-31 Identities = 98/106 (92%) Strand = Plus / Minus Query: 508 tatgcaccgtagagattggtggaatacaatacattggtgctacagcacggacaaagaaag 567 ||||||| ||||||||||||||||||||||| ||||||||| |||| | |||||||||| Sbjct: 27158 tatgcactgtagagattggtggaatacaatatattggtgctgcagccagaacaaagaaag 27099 Query: 568 aggcagagataaaagctgcccgaactgctcttcttgcaatccaagg 613 | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 27098 atgcagagataaaagctgcccgaactgctcttctggcaatccaagg 27053 Score = 137 bits (69), Expect = 2e-28 Identities = 189/229 (82%) Strand = Plus / Minus Query: 145 gggttgagaattgctacgtcttcaagagcaggctgcaggagtacgtgcagaaagccggcc 204 |||||||||| |||||||||||||||||| ||||||| ||||| | |||||||||||||| Sbjct: 29836 gggttgagaactgctacgtcttcaagagccggctgcaagagtatgcgcagaaagccggcc 29777 Query: 205 tcatgacgccagagtaccaaaccctcaaggaggggccttcccatgcgccaatcttcagct 264 || ||| |||||||| || ||| ||||||||| |||||||||| ||| |||||| | Sbjct: 29776 tccagactccagagtatcatacctccaaggagggaccttcccatgagcctgtcttcaagt 29717 Query: 265 ccaccgtggtgattaacgacgtcaagtacgactcgctgcccgggttcttcagccggaagg 324 |||| ||||||||||| || || || | ||| |||||||| |||| || | | |||| Sbjct: 29716 ccacagtggtgattaataacaccagctatggctccctgcccggattctccaacagaaagg 29657 Query: 325 ctgcagagcagtcggctgccgaagtagcgctcatggaaatcggcaagtc 373 ||||||| ||||| ||||| ||||| || ||||||||||| | |||||| Sbjct: 29656 ctgcagaacagtctgctgctgaagttgccctcatggaaattgtcaagtc 29608 Score = 129 bits (65), Expect = 4e-26 Identities = 80/85 (94%) Strand = Plus / Minus Query: 411 caagaaactggtctgtgcaagaatcttcttcaggagtatgctcagaagatgaattatgct 470 ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 27267 caagagactgggctgtgcaagaatcttcttcaggagtatgcacagaagatgaattatgcc 27208 Query: 471 attccatcttatatttgcaacaaac 495 ||||||||||||||||||| ||||| Sbjct: 27207 attccatcttatatttgcaccaaac 27183 Score = 103 bits (52), Expect = 2e-18 Identities = 187/232 (80%) Strand = Plus / Minus Query: 615 caatcagagggttgcgcgaatggtaccacaaaatatattgttgtgcctggaaaaaggcaa 674 ||||||||||||| || |||||| | ||||||||||| || || ||||| |||||| | Sbjct: 26914 caatcagagggttctgcaaatggtgcgacaaaatatatcgtagttcctggtaaaagggta 26855 Query: 675 ggtaaggacaccgagaaaaagcccgttgaaactccaaaatcacttaagaccaagaaaggt 734 |||||||| || |||| ||| ||||||| || ||| ||||||| | ||||||||| Sbjct: 26854 ggtaaggaggtagaaaaaaggccaattgaaacccccaaaccacttaaagcaaagaaaggt 26795 Query: 735 ggtttcaagaagcaacggaacaagaataaattcatcaagaagaatggccaagaagttaac 794 |||||||||||| || ||||||||| |||||||| |||||| |||| |||| ||| | Sbjct: 26794 ggtttcaagaagaaatggaacaagaggaaattcatgaagaaggatggtcaagctgttgat 26735 Query: 795 gagggaaaggatgagactggagtgcctggagatgctcatcattcagatgtcc 846 | | ||||||||| || ||||| |||||||||||||| |||| ||||||| Sbjct: 26734 gttgaaaaggatgaagctagagtggctggagatgctcatgattctgatgtcc 26683 Score = 50.1 bits (25), Expect = 0.032 Identities = 31/33 (93%) Strand = Plus / Minus Query: 1308 gctgcaatggtgcaacctaatgatgaagctaga 1340 |||||| ||||||||||| |||||||||||||| Sbjct: 26539 gctgcattggtgcaacctgatgatgaagctaga 26507
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 147 bits (74), Expect = 2e-31 Identities = 98/106 (92%) Strand = Plus / Minus Query: 508 tatgcaccgtagagattggtggaatacaatacattggtgctacagcacggacaaagaaag 567 ||||||| ||||||||||||||||||||||| ||||||||| |||| | |||||||||| Sbjct: 13809656 tatgcactgtagagattggtggaatacaatatattggtgctgcagccagaacaaagaaag 13809597 Query: 568 aggcagagataaaagctgcccgaactgctcttcttgcaatccaagg 613 | |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 13809596 atgcagagataaaagctgcccgaactgctcttctggcaatccaagg 13809551 Score = 137 bits (69), Expect = 2e-28 Identities = 189/229 (82%) Strand = Plus / Minus Query: 145 gggttgagaattgctacgtcttcaagagcaggctgcaggagtacgtgcagaaagccggcc 204 |||||||||| |||||||||||||||||| ||||||| ||||| | |||||||||||||| Sbjct: 13812334 gggttgagaactgctacgtcttcaagagccggctgcaagagtatgcgcagaaagccggcc 13812275 Query: 205 tcatgacgccagagtaccaaaccctcaaggaggggccttcccatgcgccaatcttcagct 264 || ||| |||||||| || ||| ||||||||| |||||||||| ||| |||||| | Sbjct: 13812274 tccagactccagagtatcatacctccaaggagggaccttcccatgagcctgtcttcaagt 13812215 Query: 265 ccaccgtggtgattaacgacgtcaagtacgactcgctgcccgggttcttcagccggaagg 324 |||| ||||||||||| || || || | ||| |||||||| |||| || | | |||| Sbjct: 13812214 ccacagtggtgattaataacaccagctatggctccctgcccggattctccaacagaaagg 13812155 Query: 325 ctgcagagcagtcggctgccgaagtagcgctcatggaaatcggcaagtc 373 ||||||| ||||| ||||| ||||| || ||||||||||| | |||||| Sbjct: 13812154 ctgcagaacagtctgctgctgaagttgccctcatggaaattgtcaagtc 13812106 Score = 129 bits (65), Expect = 4e-26 Identities = 80/85 (94%) Strand = Plus / Minus Query: 411 caagaaactggtctgtgcaagaatcttcttcaggagtatgctcagaagatgaattatgct 470 ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 13809765 caagagactgggctgtgcaagaatcttcttcaggagtatgcacagaagatgaattatgcc 13809706 Query: 471 attccatcttatatttgcaacaaac 495 ||||||||||||||||||| ||||| Sbjct: 13809705 attccatcttatatttgcaccaaac 13809681 Score = 103 bits (52), Expect = 2e-18 Identities = 187/232 (80%) Strand = Plus / Minus Query: 615 caatcagagggttgcgcgaatggtaccacaaaatatattgttgtgcctggaaaaaggcaa 674 ||||||||||||| || |||||| | ||||||||||| || || ||||| |||||| | Sbjct: 13809412 caatcagagggttctgcaaatggtgcgacaaaatatatcgtagttcctggtaaaagggta 13809353 Query: 675 ggtaaggacaccgagaaaaagcccgttgaaactccaaaatcacttaagaccaagaaaggt 734 |||||||| || |||| ||| ||||||| || ||| ||||||| | ||||||||| Sbjct: 13809352 ggtaaggaggtagaaaaaaggccaattgaaacccccaaaccacttaaagcaaagaaaggt 13809293 Query: 735 ggtttcaagaagcaacggaacaagaataaattcatcaagaagaatggccaagaagttaac 794 |||||||||||| || ||||||||| |||||||| |||||| |||| |||| ||| | Sbjct: 13809292 ggtttcaagaagaaatggaacaagaggaaattcatgaagaaggatggtcaagctgttgat 13809233 Query: 795 gagggaaaggatgagactggagtgcctggagatgctcatcattcagatgtcc 846 | | ||||||||| || ||||| |||||||||||||| |||| ||||||| Sbjct: 13809232 gttgaaaaggatgaagctagagtggctggagatgctcatgattctgatgtcc 13809181 Score = 50.1 bits (25), Expect = 0.032 Identities = 31/33 (93%) Strand = Plus / Minus Query: 1308 gctgcaatggtgcaacctaatgatgaagctaga 1340 |||||| ||||||||||| |||||||||||||| Sbjct: 13809037 gctgcattggtgcaacctgatgatgaagctaga 13809005
>dbj|AK063972.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-B06, full insert sequence Length = 1754 Score = 129 bits (65), Expect = 4e-26 Identities = 188/229 (82%) Strand = Plus / Plus Query: 145 gggttgagaattgctacgtcttcaagagcaggctgcaggagtacgtgcagaaagccggcc 204 |||||||||| |||||||||||||||||| ||||||| ||||| | |||||| |||||| Sbjct: 133 gggttgagaactgctacgtcttcaagagccggctgcaagagtatgcacagaaaaccggcc 192 Query: 205 tcatgacgccagagtaccaaaccctcaaggaggggccttcccatgcgccaatcttcagct 264 || ||| |||||||| || ||| |||||||||| |||||||| | ||| |||||| | Sbjct: 193 tccagactccagagtatcataccttcaaggagggaccttcccacgagcctgtcttcaagt 252 Query: 265 ccaccgtggtgattaacgacgtcaagtacgactcgctgcccgggttcttcagccggaagg 324 |||| ||||||||||| | || || ||||| |||||||| ||||||| | | |||| Sbjct: 253 ccacagtggtgattaataataccagctatgactccctgcccggattcttcaacagaaagg 312 Query: 325 ctgcagagcagtcggctgccgaagtagcgctcatggaaatcggcaagtc 373 ||||||| ||||| ||||| ||||| || ||||||||||| | |||||| Sbjct: 313 ctgcagaacagtctgctgctgaagttgccctcatggaaattgtcaagtc 361
>gb|AY110743.1| Zea mays CL26752_1 mRNA sequence Length = 681 Score = 129 bits (65), Expect = 4e-26 Identities = 80/85 (94%) Strand = Plus / Plus Query: 405 gcagtccaagaaactggtctgtgcaagaatcttcttcaggagtatgctcagaagatgaat 464 ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 178 gcagttcaagaaactggcctgtgcaagaatctccttcaggagtatgctcagaagatgaat 237 Query: 465 tatgctattccatcttatatttgca 489 || || ||||||||||||||||||| Sbjct: 238 tacgccattccatcttatatttgca 262 Score = 73.8 bits (37), Expect = 2e-09 Identities = 43/45 (95%) Strand = Plus / Plus Query: 578 aaaagctgcccgaactgctcttcttgcaatccaaggccaatcaga 622 |||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 363 aaaagctgcccgaactgctcttcttgcaatccaaagtcaatcaga 407
>gb|AY578152.1| Brassica napus dsRNA-binding protein LH-c mRNA, complete cds Length = 825 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 426 tgcaagaatcttcttcaggagtatgctcagaagatgaattatgctattcca 476 ||||||||||||||||| ||||| ||||| |||||||| || || |||||| Sbjct: 304 tgcaagaatcttcttcaagagtacgctcaaaagatgaactacgcgattcca 354
>gb|AY578149.1| Brassica rapa subsp. chinensis dsRNA-binding protein LH mRNA, complete cds Length = 825 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 426 tgcaagaatcttcttcaggagtatgctcagaagatgaattatgctattcca 476 ||||||||||||||||| ||||| ||||| |||||||| || || |||||| Sbjct: 304 tgcaagaatcttcttcaagagtacgctcaaaagatgaactacgcgattcca 354
>emb|Y16954.1|BCBCPLH Brassica compestris mRNA for BcpLH protein Length = 1092 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 426 tgcaagaatcttcttcaggagtatgctcagaagatgaattatgctattcca 476 ||||||||||||||||| ||||| ||||| |||||||| || || |||||| Sbjct: 361 tgcaagaatcttcttcaagagtacgctcaaaagatgaactacgcgattcca 411
>emb|AJ534652.1|BOL534652 Brassica oleracea var. gemmifera mRNA for dsRNA-binding protein (lh gene) Length = 852 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 426 tgcaagaatcttcttcaggagtatgctcagaagatgaattatgctattcca 476 ||||||||||||||||| ||||| ||||| |||||||| || || |||||| Sbjct: 304 tgcaagaatcttcttcaagagtacgctcaaaagatgaactacgcgattcca 354
>emb|AJ534651.1|BOL534651 Brassica oleracea var. italica mRNA for dsRNA-binding protein (lh gene) Length = 852 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 426 tgcaagaatcttcttcaggagtatgctcagaagatgaattatgctattcca 476 ||||||||||||||||| ||||| ||||| |||||||| || || |||||| Sbjct: 304 tgcaagaatcttcttcaagagtacgctcaaaagatgaactacgcgattcca 354
>emb|AJ534650.1|BOL534650 Brassica oleracea var. gongylodes mRNA for dsRNA-binding protein (lh gene) Length = 852 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 426 tgcaagaatcttcttcaggagtatgctcagaagatgaattatgctattcca 476 ||||||||||||||||| ||||| ||||| |||||||| || || |||||| Sbjct: 304 tgcaagaatcttcttcaagagtacgctcaaaagatgaactacgcgattcca 354
>emb|AJ534649.1|BOL534649 Brassica oleracea var. botrytis mRNA for dsRNA-binding protein (lh gene) Length = 852 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 426 tgcaagaatcttcttcaggagtatgctcagaagatgaattatgctattcca 476 ||||||||||||||||| ||||| ||||| |||||||| || || |||||| Sbjct: 304 tgcaagaatcttcttcaagagtacgctcaaaagatgaactacgcgattcca 354
>emb|AJ534648.1|BOL534648 Brassica oleracea var. acephala mRNA for dsRNA-binding protein (lh gene) Length = 852 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 426 tgcaagaatcttcttcaggagtatgctcagaagatgaattatgctattcca 476 ||||||||||||||||| ||||| ||||| |||||||| || || |||||| Sbjct: 304 tgcaagaatcttcttcaagagtacgctcaaaagatgaactacgcgattcca 354
>emb|AJ534647.1|BCA534647 Brassica rapa subsp. rapa mRNA for dsRNA-binding protein (lh gene) Length = 828 Score = 54.0 bits (27), Expect = 0.002 Identities = 45/51 (88%) Strand = Plus / Plus Query: 426 tgcaagaatcttcttcaggagtatgctcagaagatgaattatgctattcca 476 ||||||||||||||||| ||||| ||||| |||||||| || || |||||| Sbjct: 304 tgcaagaatcttcttcaagagtacgctcaaaagatgaactacgcgattcca 354
>emb|CU041360.9| S.lycopersicum DNA sequence from clone SL_MboI-129D14 on chromosome 4, complete sequence Length = 129590 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 444 gagtatgctcagaagatgaatt 465 |||||||||||||||||||||| Sbjct: 123077 gagtatgctcagaagatgaatt 123056
>ref|NM_001055529.1| Oryza sativa (japonica cultivar-group) Os03g0152700 (Os03g0152700) mRNA, complete cds Length = 3246 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 49 gcggcggcgcggtgggcatggacggc 74 |||||||||||||| ||||||||||| Sbjct: 339 gcggcggcgcggtgcgcatggacggc 314
>gb|AC094946.6| Rattus norvegicus BAC CH230-6C14 () complete sequence Length = 226407 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1751 agttttacatcttgatttgcaa 1772 |||||||||||||||||||||| Sbjct: 26279 agttttacatcttgatttgcaa 26258
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 2.0 Identities = 28/30 (93%) Strand = Plus / Minus Query: 71 cggcgccggcatggcgacgccgccggaggc 100 |||||||||||||| | ||||||||||||| Sbjct: 4690493 cggcgccggcatggagccgccgccggaggc 4690464
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 49 gcggcggcgcggtgggcatggacggc 74 |||||||||||||| ||||||||||| Sbjct: 2883721 gcggcggcgcggtgcgcatggacggc 2883696
>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0016I15, complete sequence Length = 166282 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 49 gcggcggcgcggtgggcatggacggc 74 |||||||||||||| ||||||||||| Sbjct: 21097 gcggcggcgcggtgcgcatggacggc 21072
>emb|AL607124.15| Mouse DNA sequence from clone RP23-20C9 on chromosome 11 Contains the Igfbp1 and Igfbp3 genes for insulin-like growth factor binding protein 1, a novel gene and a CpG island, complete sequence Length = 192843 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 756 aagaataaattcatcaagaaga 777 |||||||||||||||||||||| Sbjct: 62198 aagaataaattcatcaagaaga 62219
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 49 gcggcggcgcggtgggcatggacggc 74 |||||||||||||| ||||||||||| Sbjct: 155566 gcggcggcgcggtgcgcatggacggc 155541
>dbj|AK067387.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099O15, full insert sequence Length = 3247 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 49 gcggcggcgcggtgggcatggacggc 74 |||||||||||||| ||||||||||| Sbjct: 340 gcggcggcgcggtgcgcatggacggc 315
>ref|XM_395705.3| PREDICTED: Apis mellifera similar to CG18497-PA, isoform A (LOC412243), partial mRNA Length = 13130 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 740 caagaagcaacggaacaagaa 760 ||||||||||||||||||||| Sbjct: 6220 caagaagcaacggaacaagaa 6240
>ref|XM_635533.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0204655) mRNA, complete cds Length = 1065 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 725 caagaaaggtggtttcaagaa 745 ||||||||||||||||||||| Sbjct: 996 caagaaaggtggtttcaagaa 1016
>ref|XM_656748.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4236.2), mRNA Length = 1398 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1377 cctctccccaatgaggaagcc 1397 ||||||||||||||||||||| Sbjct: 1138 cctctccccaatgaggaagcc 1158
>dbj|AK030770.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730588L14 product:unclassifiable, full insert sequence Length = 3946 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1477 agtcactgaggaatgcagcat 1497 ||||||||||||||||||||| Sbjct: 3094 agtcactgaggaatgcagcat 3114
>gb|AC093656.4| Homo sapiens BAC clone RP11-440N4 from 4, complete sequence Length = 152326 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1672 aaaagagctcaaataattcat 1692 ||||||||||||||||||||| Sbjct: 9781 aaaagagctcaaataattcat 9801
>gb|AC097519.2| Homo sapiens BAC clone RP11-549K7 from 4, complete sequence Length = 185556 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1672 aaaagagctcaaataattcat 1692 ||||||||||||||||||||| Sbjct: 76141 aaaagagctcaaataattcat 76161
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1637 tcgtgaggcaaataggtccat 1657 ||||||||||||||||||||| Sbjct: 12744672 tcgtgaggcaaataggtccat 12744692
>gb|AC092868.2| Homo sapiens chromosome 15 clone RP11-356M20 map 15q21.3, complete sequence Length = 157533 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1468 taaatggggagtcactgagga 1488 ||||||||||||||||||||| Sbjct: 52699 taaatggggagtcactgagga 52719
>gb|AC091748.3| Homo sapiens chromosome 15 clone RP11-99L18 map 15q21.3, complete sequence Length = 150294 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1468 taaatggggagtcactgagga 1488 ||||||||||||||||||||| Sbjct: 24378 taaatggggagtcactgagga 24398
>emb|AL662962.3|OSJN00165 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029L02, complete sequence Length = 165786 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1637 tcgtgaggcaaataggtccat 1657 ||||||||||||||||||||| Sbjct: 38891 tcgtgaggcaaataggtccat 38911
>gb|AC022968.9| Homo sapiens chromosome 18, clone RP11-421N8, complete sequence Length = 187277 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1588 atggtgaatttgtttctgaaa 1608 ||||||||||||||||||||| Sbjct: 44030 atggtgaatttgtttctgaaa 44010
>emb|BX510352.17| Zebrafish DNA sequence from clone DKEY-96J11 in linkage group 18, complete sequence Length = 152387 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 481 atatttgcaacaaacaaagtc 501 ||||||||||||||||||||| Sbjct: 24690 atatttgcaacaaacaaagtc 24670
>dbj|AP004953.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT34A24, TM0129, complete sequence Length = 110487 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 897 atgcaacctgatgaagaagct 917 ||||||||||||||||||||| Sbjct: 45485 atgcaacctgatgaagaagct 45465
>emb|AL732311.13| Mouse DNA sequence from clone RP23-125H15 on chromosome 2, complete sequence Length = 209215 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1477 agtcactgaggaatgcagcat 1497 ||||||||||||||||||||| Sbjct: 54214 agtcactgaggaatgcagcat 54234
>gb|M63837.1|RATAPDGFR Rat alpha-platelet-derived growth factor receptor mRNA Length = 6264 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 aatcttcagctccaccgtggt 274 ||||||||||||||||||||| Sbjct: 4673 aatcttcagctccaccgtggt 4653
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 42.1 bits (21), Expect = 7.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 771 aagaagaatggccaagaagtt 791 ||||||||||||||||||||| Sbjct: 5915427 aagaagaatggccaagaagtt 5915447 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 380,654,697 Number of extensions: 20162953 Number of successful extensions: 130255 Number of sequences better than 10.0: 53 Number of HSP's gapped: 130228 Number of HSP's successfully gapped: 157 Length of query: 2029 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2006 Effective length of database: 18,503,978,556 Effective search space: 37118980983336 Effective search space used: 37118980983336 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
