| Clone Name | FLbaf88c17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009058.1| Triticum aestivum clone wdr1f.pk003.b21:fis, full insert mRNA sequence Length = 1157 Score = 1189 bits (600), Expect = 0.0 Identities = 717/756 (94%) Strand = Plus / Plus Query: 83 agatcctgcagacccggctcgtctcgagtaaccgccgccatgtcgtcgtcgaccgatccg 142 |||||||||| | ||||||||| |||||||||||| |||||||||| |||||||| Sbjct: 132 agatcctgcaagctcggctcgtcgcgagtaaccgccatgtcgtcgtcgtcgtccgatccg 191 Query: 143 tcgctggcgaccgaggcgccccaggcggccgtcaccagagagcggaagctcaaccccgac 202 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||| Sbjct: 192 tcgctggcgaccgaggcgccccaggcggccgtcaccagcgagcgcaagctcaaccgcgac 251 Query: 203 ctgcaggagcagctcgccaagccatatctggctcgagcaatggcggcggttgacccgagc 262 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 252 ctgcaggagcagctcgccaagccatatctggccagagcaatggcggcggttgacccgagc 311 Query: 263 cacccggagggcagcaaggggagggacaccaagggcatgagcgtgctccagcagcacgcc 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 312 cacccggagggcagcaaggggagggacaccaagggcatgagcgtgctccagcagcacgcc 371 Query: 323 gccttcttcgaccgcaacggcgacggggtaatctacccatgggagaccttccaaagcctg 382 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 372 gccttcttcgaccgcaacggcgacggggtcatctacccatgggagaccttccagagcctg 431 Query: 383 cgagcgatcgggcttgggtccccttcagccttcggaacatccatactcctccacctcgtc 442 ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 432 cgagcaatcgggcttgggtcgccttcagccttcggaacatccatactcctccacctcgtc 491 Query: 443 ctcacttatcctactcaaccggggtggatgccttcccctctgctttcagtccatataaag 502 ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| Sbjct: 492 ctcacttatcctactcaaccgggatggatgccttcccctctgctgtcgatccatataaag 551 Query: 503 aacatccacaggggcaagcatgggagcgattctgagacgtatgacactgaagggaggttt 562 |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 552 aacatccacaggggcaagcacgggagcgattctgagacgtatgacacagaagggaggttt 611 Query: 563 gaaccagcaaaattcgatgctatattcagcaagtttggccgaactcggccgaatgctttg 622 |||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 612 gaaccagcgaaattcgatgctatattcagcaagtttggcaaaactcggccaaatgctttg 671 Query: 623 tcagaagatgagattaacgccatgcttaaacacaaccgtaatatgtatgatttcctgggc 682 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 672 tcagaagatgagattaacgccatgcttaaatacaaccgcaatatgtatgatttcctgggc 731 Query: 683 tgggccgcagccaacctcgaatggaagttgctgcacaaggtggcaaaggataaagaaggc 742 |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 732 tgggccgcggccaacctcgaatggaagttgctgcacaaggtggcaaaggataacgaaggc 791 Query: 743 cttttgcagcgagaaatcgtgaggggcgccttcgatggcagcctgttcgagcgcctgcag 802 |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 792 tttttgcagcgagaaatcgtgcggggcgccttcgatggcagcctgttcgagcgtctgcag 851 Query: 803 gagagcaagaaatcttcctgaatgcggcagtgagcc 838 || |||||||||||| |||||||| ||||||||||| Sbjct: 852 gaaagcaagaaatctacctgaatgtggcagtgagcc 887 Score = 143 bits (72), Expect = 1e-30 Identities = 141/163 (86%), Gaps = 7/163 (4%) Strand = Plus / Plus Query: 860 tcgtctatgaaacatctgcacttgaaatttgaaaagcctccctg-----tagtttgagtt 914 |||||| | ||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 888 tcgtctctaaaatatctgcacttgaaatttgaaaagcctccctgcattgtagtttgagtt 947 Query: 915 gtgtgtacgtcgaataagaagtgctcggcccgtctacggcggcctaaacattttcatctg 974 |||| ||||| ||||||||||| | ||||||||| ||||||||||||||||||||| || Sbjct: 948 gtgt--acgtcaaataagaagtgtttggcccgtctgcggcggcctaaacattttcatttg 1005 Query: 975 tcttcatatttggaactggaatttgtactgttattggtagcgc 1017 || ||||| ||||||||||||||| | ||||||||||||| Sbjct: 1006 cattgttattttgaactggaatttgtatttttattggtagcgc 1048
>emb|CT835111.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA041B02, full insert sequence Length = 949 Score = 212 bits (107), Expect = 2e-51 Identities = 224/263 (85%) Strand = Plus / Plus Query: 423 ccatactcctccacctcgtcctcacttatcctactcaaccggggtggatgccttcccctc 482 |||||||| || |||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 368 ccatactcatcaacctcgtcctcagctatcctactcaaccggggtggatgccttctcctc 427 Query: 483 tgctttcagtccatataaagaacatccacaggggcaagcatgggagcgattctgagacgt 542 || |||| |||||||||||||||| |||| ||| ||||||||||| || ||||| | | Sbjct: 428 tgttttccatccatataaagaacattcacaagggtaagcatgggagtgactctgaagcat 487 Query: 543 atgacactgaagggaggtttgaaccagcaaaattcgatgctatattcagcaagtttggcc 602 |||| ||||||||||||||||| ||| | ||||| ||||||||||||||||||| |||| Sbjct: 488 atgatactgaagggaggtttgatccatcgaaatttgatgctatattcagcaagtatggca 547 Query: 603 gaactcggccgaatgctttgtcagaagatgagattaacgccatgcttaaacacaaccgta 662 |||||| || ||||||||| || |||||||| | ||| | ||| ||||| ||||| | Sbjct: 548 gaactcatccaaatgctttgacaaaagatgagctgaactcgatgattaaagcaaaccgca 607 Query: 663 atatgtatgatttcctgggctgg 685 |||||||||||||| | |||||| Sbjct: 608 atatgtatgatttcattggctgg 630 Score = 168 bits (85), Expect = 3e-38 Identities = 178/209 (85%) Strand = Plus / Plus Query: 182 gagcggaagctcaaccccgacctgcaggagcagctcgccaagccatatctggctcgagca 241 |||||||||||||||||| |||||||||||||||| ||||||||||||| || | || Sbjct: 127 gagcggaagctcaaccccaacctgcaggagcagcttcccaagccatatctcgcgagggct 186 Query: 242 atggcggcggttgacccgagccacccggagggcagcaaggggagggacaccaagggcatg 301 | |||||||| ||||||||||||||| |||| | | ||| | ||| || |||||| Sbjct: 187 ctcgcggcggtggacccgagccacccgcaggggacccgtgggcgcgacgcccgcggcatg 246 Query: 302 agcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccca 361 ||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||| Sbjct: 247 agcgtgctccagcagcacgccgcgttcttcgaccgcaacggcgacggcatcatctacccc 306 Query: 362 tgggagaccttccaaagcctgcgagcgat 390 ||||||||||||||| | ||| ||||||| Sbjct: 307 tgggagaccttccaagggctgagagcgat 335 Score = 95.6 bits (48), Expect = 3e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 722 gtggcaaaggataaagaaggccttttgcagcgagaaatcgtgaggggcgccttcgatggc 781 ||||| |||||||||||||| || ||||| ||||||| || || ||||||||||||||| Sbjct: 667 gtggccaaggataaagaagggctgttgcaacgagaaactgttagaggcgccttcgatggc 726 Query: 782 agcctgttcgagcgcctgcaggagagcaagaaatct 817 |||||||| ||||| || ||||| |||||||||||| Sbjct: 727 agcctgtttgagcgacttcaggacagcaagaaatct 762
>dbj|AK243437.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100068E06, full insert sequence Length = 1003 Score = 212 bits (107), Expect = 2e-51 Identities = 224/263 (85%) Strand = Plus / Plus Query: 423 ccatactcctccacctcgtcctcacttatcctactcaaccggggtggatgccttcccctc 482 |||||||| || |||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 454 ccatactcatcaacctcgtcctcagctatcctactcaaccggggtggatgccttctcctc 513 Query: 483 tgctttcagtccatataaagaacatccacaggggcaagcatgggagcgattctgagacgt 542 || |||| |||||||||||||||| |||| ||| ||||||||||| || ||||| | | Sbjct: 514 tgttttccatccatataaagaacattcacaagggtaagcatgggagtgactctgaagcat 573 Query: 543 atgacactgaagggaggtttgaaccagcaaaattcgatgctatattcagcaagtttggcc 602 |||| ||||||||||||||||| ||| | ||||| ||||||||||||||||||| |||| Sbjct: 574 atgatactgaagggaggtttgatccatcgaaatttgatgctatattcagcaagtatggca 633 Query: 603 gaactcggccgaatgctttgtcagaagatgagattaacgccatgcttaaacacaaccgta 662 |||||| || ||||||||| || |||||||| | ||| | ||| ||||| ||||| | Sbjct: 634 gaactcatccaaatgctttgacaaaagatgagctgaactcgatgattaaagcaaaccgca 693 Query: 663 atatgtatgatttcctgggctgg 685 |||||||||||||| | |||||| Sbjct: 694 atatgtatgatttcattggctgg 716 Score = 168 bits (85), Expect = 3e-38 Identities = 178/209 (85%) Strand = Plus / Plus Query: 182 gagcggaagctcaaccccgacctgcaggagcagctcgccaagccatatctggctcgagca 241 |||||||||||||||||| |||||||||||||||| ||||||||||||| || | || Sbjct: 213 gagcggaagctcaaccccaacctgcaggagcagcttcccaagccatatctcgcgagggct 272 Query: 242 atggcggcggttgacccgagccacccggagggcagcaaggggagggacaccaagggcatg 301 | |||||||| ||||||||||||||| |||| | | ||| | ||| || |||||| Sbjct: 273 ctcgcggcggtggacccgagccacccgcaggggacccgtgggcgcgacgcccgcggcatg 332 Query: 302 agcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccca 361 ||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||| Sbjct: 333 agcgtgctccagcagcacgccgcgttcttcgaccgcaacggcgacggcatcatctacccc 392 Query: 362 tgggagaccttccaaagcctgcgagcgat 390 ||||||||||||||| | ||| ||||||| Sbjct: 393 tgggagaccttccaagggctgagagcgat 421 Score = 95.6 bits (48), Expect = 3e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 722 gtggcaaaggataaagaaggccttttgcagcgagaaatcgtgaggggcgccttcgatggc 781 ||||| |||||||||||||| || ||||| ||||||| || || ||||||||||||||| Sbjct: 753 gtggccaaggataaagaagggctgttgcaacgagaaactgttagaggcgccttcgatggc 812 Query: 782 agcctgttcgagcgcctgcaggagagcaagaaatct 817 |||||||| ||||| || ||||| |||||||||||| Sbjct: 813 agcctgtttgagcgacttcaggacagcaagaaatct 848
>ref|NM_001055954.1| Oryza sativa (japonica cultivar-group) Os03g0222600 (Os03g0222600) mRNA, complete cds Length = 984 Score = 212 bits (107), Expect = 2e-51 Identities = 224/263 (85%) Strand = Plus / Plus Query: 423 ccatactcctccacctcgtcctcacttatcctactcaaccggggtggatgccttcccctc 482 |||||||| || |||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 584 ccatactcatcaacctcgtcctcagctatcctactcaaccggggtggatgccttctcctc 643 Query: 483 tgctttcagtccatataaagaacatccacaggggcaagcatgggagcgattctgagacgt 542 || |||| |||||||||||||||| |||| ||| ||||||||||| || ||||| | | Sbjct: 644 tgttttccatccatataaagaacattcacaagggtaagcatgggagtgactctgaagcat 703 Query: 543 atgacactgaagggaggtttgaaccagcaaaattcgatgctatattcagcaagtttggcc 602 |||| ||||||||||||||||| ||| | ||||| ||||||||||||||||||| |||| Sbjct: 704 atgatactgaagggaggtttgatccatcgaaatttgatgctatattcagcaagtatggca 763 Query: 603 gaactcggccgaatgctttgtcagaagatgagattaacgccatgcttaaacacaaccgta 662 |||||| || ||||||||| || |||||||| | ||| | ||| ||||| ||||| | Sbjct: 764 gaactcatccaaatgctttgacaaaagatgagctgaactcgatgattaaagcaaaccgca 823 Query: 663 atatgtatgatttcctgggctgg 685 |||||||||||||| | |||||| Sbjct: 824 atatgtatgatttcattggctgg 846 Score = 168 bits (85), Expect = 3e-38 Identities = 178/209 (85%) Strand = Plus / Plus Query: 182 gagcggaagctcaaccccgacctgcaggagcagctcgccaagccatatctggctcgagca 241 |||||||||||||||||| |||||||||||||||| ||||||||||||| || | || Sbjct: 343 gagcggaagctcaaccccaacctgcaggagcagcttcccaagccatatctcgcgagggct 402 Query: 242 atggcggcggttgacccgagccacccggagggcagcaaggggagggacaccaagggcatg 301 | |||||||| ||||||||||||||| |||| | | ||| | ||| || |||||| Sbjct: 403 ctcgcggcggtggacccgagccacccgcaggggacccgtgggcgcgacgcccgcggcatg 462 Query: 302 agcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccca 361 ||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||| Sbjct: 463 agcgtgctccagcagcacgccgcgttcttcgaccgcaacggcgacggcatcatctacccc 522 Query: 362 tgggagaccttccaaagcctgcgagcgat 390 ||||||||||||||| | ||| ||||||| Sbjct: 523 tgggagaccttccaagggctgagagcgat 551 Score = 95.6 bits (48), Expect = 3e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 722 gtggcaaaggataaagaaggccttttgcagcgagaaatcgtgaggggcgccttcgatggc 781 ||||| |||||||||||||| || ||||| ||||||| || || ||||||||||||||| Sbjct: 883 gtggccaaggataaagaagggctgttgcaacgagaaactgttagaggcgccttcgatggc 942 Query: 782 agcctgttcgagcgcctgcaggagagcaagaaatct 817 |||||||| ||||| || ||||| |||||||||||| Sbjct: 943 agcctgtttgagcgacttcaggacagcaagaaatct 978
>gb|AY104352.1| Zea mays PCO064372 mRNA sequence Length = 912 Score = 125 bits (63), Expect = 3e-25 Identities = 201/247 (81%) Strand = Plus / Plus Query: 141 cgtcgctggcgaccgaggcgccccaggcggccgtcaccagagagcggaagctcaaccccg 200 |||| |||| ||| |||||||||||||| ||||||| || ||||| | ||||||||||| Sbjct: 271 cgtctctggagacggaggcgccccaggctaccgtcacgagggagcgcaggctcaaccccg 330 Query: 201 acctgcaggagcagctcgccaagccatatctggctcgagcaatggcggcggttgacccga 260 ||||||||||||| || ||||||||||||| || | || |||| |||||| |||||| Sbjct: 331 acctgcaggagcaccttcccaagccatatctcgcgagggctatggtggcggtggacccgg 390 Query: 261 gccacccggagggcagcaaggggagggacaccaagggcatgagcgtgctccagcagcacg 320 ||| ||| || | | ||||| | ||| || |||||||||||||| |||||||||| Sbjct: 391 accatccgaccgggaccgaggggcgcgacccccgcggcatgagcgtgcttcagcagcacg 450 Query: 321 ccgccttcttcgaccgcaacggcgacggggtaatctacccatgggagaccttccaaagcc 380 || ||||||||||||||||||||||| || ||||||| |||||||| ||| || || Sbjct: 451 tggctttcttcgaccgcaacggcgacggcgtcgtctacccctgggagactttcaaaggca 510 Query: 381 tgcgagc 387 ||||||| Sbjct: 511 tgcgagc 517 Score = 93.7 bits (47), Expect = 1e-15 Identities = 122/147 (82%) Strand = Plus / Plus Query: 539 acgtatgacactgaagggaggtttgaaccagcaaaattcgatgctatattcagcaagttt 598 |||||||||||||||||||||||||| ||| |||||||||| |||||||| ||||||| | Sbjct: 669 acgtatgacactgaagggaggtttgacccatcaaaattcgacgctatatttagcaagtat 728 Query: 599 ggccgaactcggccgaatgctttgtcagaagatgagattaacgccatgcttaaacacaac 658 || || |||| || |||| ||| || |||||||||| || | |||||||| ||| Sbjct: 729 ggtcgtactcatccagatgcgttgacaaaagatgagatgaattcgatgcttaaggcaaac 788 Query: 659 cgtaatatgtatgatttcctgggctgg 685 || ||||| ||||||||||| |||||| Sbjct: 789 cgcaatatatatgatttcctcggctgg 815 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 722 gtggcaaaggataaagaaggccttttgcagcgagaaat 759 ||||||||||| ||||| ||||| |||||||||||||| Sbjct: 852 gtggcaaaggacaaagatggcctgttgcagcgagaaat 889
>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09, complete sequence Length = 146568 Score = 121 bits (61), Expect = 5e-24 Identities = 76/81 (93%) Strand = Plus / Plus Query: 296 ggcatgagcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatc 355 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||| Sbjct: 67386 ggcatgagcgtgctccagcagcacgccgcgttcttcgaccgcaacggcgacggcatcatc 67445 Query: 356 tacccatgggagaccttccaa 376 ||||| ||||||||||||||| Sbjct: 67446 tacccctgggagaccttccaa 67466 Score = 95.6 bits (48), Expect = 3e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 722 gtggcaaaggataaagaaggccttttgcagcgagaaatcgtgaggggcgccttcgatggc 781 ||||| |||||||||||||| || ||||| ||||||| || || ||||||||||||||| Sbjct: 68706 gtggccaaggataaagaagggctgttgcaacgagaaactgttagaggcgccttcgatggc 68765 Query: 782 agcctgttcgagcgcctgcaggagagcaagaaatct 817 |||||||| ||||| || ||||| |||||||||||| Sbjct: 68766 agcctgtttgagcgacttcaggacagcaagaaatct 68801 Score = 91.7 bits (46), Expect = 5e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 463 ggggtggatgccttcccctctgctttcagtccatataaagaacatccacaggggcaagca 522 ||||||||||||||| |||||| |||| |||||||||||||||| |||| ||| ||||| Sbjct: 68247 ggggtggatgccttctcctctgttttccatccatataaagaacattcacaagggtaagca 68306 Query: 523 tgggagcgattctgagacgtatgacactgaagggaggt 560 |||||| || ||||| | ||||| ||||||||||||| Sbjct: 68307 tgggagtgactctgaagcatatgatactgaagggaggt 68344 Score = 81.8 bits (41), Expect = 5e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 557 aggtttgaaccagcaaaattcgatgctatattcagcaagtttggccgaactcggccgaat 616 |||||||| ||| | ||||| ||||||||||||||||||| |||| |||||| || ||| Sbjct: 68447 aggtttgatccatcgaaatttgatgctatattcagcaagtatggcagaactcatccaaat 68506 Query: 617 gctttgtcagaagatgagattaacgccatgcttaaacacaaccgtaatatgtatgatttc 676 |||||| || |||||||| | ||| | ||| ||||| ||||| ||||||||||||||| Sbjct: 68507 gctttgacaaaagatgagctgaactcgatgattaaagcaaaccgcaatatgtatgatttc 68566 Query: 677 ctgggctgg 685 | |||||| Sbjct: 68567 attggctgg 68575 Score = 67.9 bits (34), Expect = 7e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 182 gagcggaagctcaaccccgacctgcaggagcagctcgccaagccat 227 |||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 66733 gagcggaagctcaaccccaacctgcaggagcagcttcccaagccat 66778 Score = 52.0 bits (26), Expect = 0.004 Identities = 38/42 (90%) Strand = Plus / Plus Query: 423 ccatactcctccacctcgtcctcacttatcctactcaaccgg 464 |||||||| || |||||||||||| |||||||||||||||| Sbjct: 67810 ccatactcatcaacctcgtcctcagctatcctactcaaccgg 67851
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 121 bits (61), Expect = 5e-24 Identities = 76/81 (93%) Strand = Plus / Plus Query: 296 ggcatgagcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatc 355 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||| Sbjct: 6386473 ggcatgagcgtgctccagcagcacgccgcgttcttcgaccgcaacggcgacggcatcatc 6386532 Query: 356 tacccatgggagaccttccaa 376 ||||| ||||||||||||||| Sbjct: 6386533 tacccctgggagaccttccaa 6386553 Score = 95.6 bits (48), Expect = 3e-16 Identities = 84/96 (87%) Strand = Plus / Plus Query: 722 gtggcaaaggataaagaaggccttttgcagcgagaaatcgtgaggggcgccttcgatggc 781 ||||| |||||||||||||| || ||||| ||||||| || || ||||||||||||||| Sbjct: 6387793 gtggccaaggataaagaagggctgttgcaacgagaaactgttagaggcgccttcgatggc 6387852 Query: 782 agcctgttcgagcgcctgcaggagagcaagaaatct 817 |||||||| ||||| || ||||| |||||||||||| Sbjct: 6387853 agcctgtttgagcgacttcaggacagcaagaaatct 6387888 Score = 91.7 bits (46), Expect = 5e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 463 ggggtggatgccttcccctctgctttcagtccatataaagaacatccacaggggcaagca 522 ||||||||||||||| |||||| |||| |||||||||||||||| |||| ||| ||||| Sbjct: 6387334 ggggtggatgccttctcctctgttttccatccatataaagaacattcacaagggtaagca 6387393 Query: 523 tgggagcgattctgagacgtatgacactgaagggaggt 560 |||||| || ||||| | ||||| ||||||||||||| Sbjct: 6387394 tgggagtgactctgaagcatatgatactgaagggaggt 6387431 Score = 81.8 bits (41), Expect = 5e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 557 aggtttgaaccagcaaaattcgatgctatattcagcaagtttggccgaactcggccgaat 616 |||||||| ||| | ||||| ||||||||||||||||||| |||| |||||| || ||| Sbjct: 6387534 aggtttgatccatcgaaatttgatgctatattcagcaagtatggcagaactcatccaaat 6387593 Query: 617 gctttgtcagaagatgagattaacgccatgcttaaacacaaccgtaatatgtatgatttc 676 |||||| || |||||||| | ||| | ||| ||||| ||||| ||||||||||||||| Sbjct: 6387594 gctttgacaaaagatgagctgaactcgatgattaaagcaaaccgcaatatgtatgatttc 6387653 Query: 677 ctgggctgg 685 | |||||| Sbjct: 6387654 attggctgg 6387662 Score = 67.9 bits (34), Expect = 7e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 182 gagcggaagctcaaccccgacctgcaggagcagctcgccaagccat 227 |||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 6385820 gagcggaagctcaaccccaacctgcaggagcagcttcccaagccat 6385865 Score = 52.0 bits (26), Expect = 0.004 Identities = 38/42 (90%) Strand = Plus / Plus Query: 423 ccatactcctccacctcgtcctcacttatcctactcaaccgg 464 |||||||| || |||||||||||| |||||||||||||||| Sbjct: 6386897 ccatactcatcaacctcgtcctcagctatcctactcaaccgg 6386938
>emb|CR855236.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0157K09-H0214G12, complete sequence Length = 163903 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 302 agcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccca 361 |||||||| |||||||||| |||||||||||||||| ||| | |||| | ||||||||| Sbjct: 91373 agcgtgctgcagcagcacgtcgccttcttcgaccgcgacgacaacggcatcatctaccca 91314 Query: 362 tgggagacct 371 ||||| |||| Sbjct: 91313 tgggaaacct 91304
>ref|NM_001059825.1| Oryza sativa (japonica cultivar-group) Os04g0510900 (Os04g0510900) mRNA, complete cds Length = 1150 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 302 agcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccca 361 |||||||| |||||||||| |||||||||||||||| ||| | |||| | ||||||||| Sbjct: 401 agcgtgctgcagcagcacgtcgccttcttcgaccgcgacgacaacggcatcatctaccca 460 Query: 362 tgggagacct 371 ||||| |||| Sbjct: 461 tgggaaacct 470
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 302 agcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccca 361 |||||||| |||||||||| |||||||||||||||| ||| | |||| | ||||||||| Sbjct: 25529328 agcgtgctgcagcagcacgtcgccttcttcgaccgcgacgacaacggcatcatctaccca 25529269 Query: 362 tgggagacct 371 ||||| |||| Sbjct: 25529268 tgggaaacct 25529259
>emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0004N05, complete sequence Length = 158601 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 302 agcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccca 361 |||||||| |||||||||| |||||||||||||||| ||| | |||| | ||||||||| Sbjct: 15524 agcgtgctgcagcagcacgtcgccttcttcgaccgcgacgacaacggcatcatctaccca 15465 Query: 362 tgggagacct 371 ||||| |||| Sbjct: 15464 tgggaaacct 15455
>dbj|AK063625.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-E12, full insert sequence Length = 1150 Score = 67.9 bits (34), Expect = 7e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 302 agcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccca 361 |||||||| |||||||||| |||||||||||||||| ||| | |||| | ||||||||| Sbjct: 401 agcgtgctgcagcagcacgtcgccttcttcgaccgcgacgacaacggcatcatctaccca 460 Query: 362 tgggagacct 371 ||||| |||| Sbjct: 461 tgggaaacct 470
>gb|BT017540.1| Zea mays clone EL01N0422C08.c mRNA sequence Length = 1288 Score = 63.9 bits (32), Expect = 1e-06 Identities = 62/72 (86%) Strand = Plus / Plus Query: 298 catgagcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatcta 357 |||||||||| | |||||||||| |||||||||||||||| ||| | |||| | ||||| Sbjct: 501 catgagcgtgttgcagcagcacgtcgccttcttcgaccgcgacgacaacggcatcatcta 560 Query: 358 cccatgggagac 369 ||| |||||||| Sbjct: 561 cccttgggagac 572 Score = 44.1 bits (22), Expect = 0.99 Identities = 31/34 (91%) Strand = Plus / Plus Query: 207 aggagcagctcgccaagccatatctggctcgagc 240 ||||||| ||| |||||||||||||||| ||||| Sbjct: 404 aggagcacctccccaagccatatctggcgcgagc 437
>gb|AY370890.1| Hordeum vulgare caleosin 1 (Clo1) gene, complete cds Length = 2652 Score = 63.9 bits (32), Expect = 1e-06 Identities = 38/40 (95%) Strand = Plus / Plus Query: 298 catgagcgtgctccagcagcacgccgccttcttcgaccgc 337 |||||||||||| |||||||||| |||||||||||||||| Sbjct: 559 catgagcgtgctgcagcagcacgtcgccttcttcgaccgc 598
>gb|AY370889.1| Hordeum vulgare caleosin 1 (Clo1) mRNA, complete cds Length = 1069 Score = 63.9 bits (32), Expect = 1e-06 Identities = 38/40 (95%) Strand = Plus / Plus Query: 298 catgagcgtgctccagcagcacgccgccttcttcgaccgc 337 |||||||||||| |||||||||| |||||||||||||||| Sbjct: 369 catgagcgtgctgcagcagcacgtcgccttcttcgaccgc 408
>gb|AY104745.1| Zea mays PCO069403 mRNA sequence Length = 1383 Score = 63.9 bits (32), Expect = 1e-06 Identities = 62/72 (86%) Strand = Plus / Plus Query: 298 catgagcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatcta 357 |||||||||| | |||||||||| |||||||||||||||| ||| | |||| | ||||| Sbjct: 500 catgagcgtgttgcagcagcacgtcgccttcttcgaccgcgacgacaacggcatcatcta 559 Query: 358 cccatgggagac 369 ||| |||||||| Sbjct: 560 cccttgggagac 571 Score = 44.1 bits (22), Expect = 0.99 Identities = 31/34 (91%) Strand = Plus / Plus Query: 207 aggagcagctcgccaagccatatctggctcgagc 240 ||||||| ||| |||||||||||||||| ||||| Sbjct: 403 aggagcacctccccaagccatatctggcgcgagc 436
>gb|AY370892.1| Hordeum vulgare caleosin 2 (Clo2) gene, complete cds Length = 2118 Score = 52.0 bits (26), Expect = 0.004 Identities = 56/66 (84%) Strand = Plus / Plus Query: 301 gagcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccc 360 ||||||||| |||||||||| |||||||||||| | |||||||| || |||||||| Sbjct: 364 gagcgtgctgcagcagcacgtagccttcttcgacatggatggcgacggcgtcatctaccc 423 Query: 361 atggga 366 |||||| Sbjct: 424 atggga 429 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 503 aacatccacaggggcaagcatgggagcga 531 ||||||||||||| ||||||||| ||||| Sbjct: 811 aacatccacagggccaagcatggcagcga 839
>gb|AY370891.1| Hordeum vulgare caleosin 2 (Clo2) mRNA, complete cds Length = 1132 Score = 52.0 bits (26), Expect = 0.004 Identities = 56/66 (84%) Strand = Plus / Plus Query: 301 gagcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccc 360 ||||||||| |||||||||| |||||||||||| | |||||||| || |||||||| Sbjct: 204 gagcgtgctgcagcagcacgtagccttcttcgacatggatggcgacggcgtcatctaccc 263 Query: 361 atggga 366 |||||| Sbjct: 264 atggga 269 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 503 aacatccacaggggcaagcatgggagcga 531 ||||||||||||| ||||||||| ||||| Sbjct: 406 aacatccacagggccaagcatggcagcga 434
>gb|AY043288.1| Hordeum vulgare calcium-binding protein 1 (CaBP1) mRNA, complete cds Length = 963 Score = 52.0 bits (26), Expect = 0.004 Identities = 56/66 (84%) Strand = Plus / Plus Query: 301 gagcgtgctccagcagcacgccgccttcttcgaccgcaacggcgacggggtaatctaccc 360 ||||||||| |||||||||| |||||||||||| | |||||||| || |||||||| Sbjct: 242 gagcgtgctgcagcagcacgtagccttcttcgacatggatggcgacggcgtcatctaccc 301 Query: 361 atggga 366 |||||| Sbjct: 302 atggga 307 Score = 42.1 bits (21), Expect = 3.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 503 aacatccacaggggcaagcatgggagcga 531 ||||||||||||| ||||||||| ||||| Sbjct: 441 aacatccacagggccaagcatggcagcga 469
>emb|CT831940.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRN135H10, full insert sequence Length = 1062 Score = 46.1 bits (23), Expect = 0.25 Identities = 32/35 (91%) Strand = Plus / Plus Query: 500 aagaacatccacaggggcaagcatgggagcgattc 534 ||||||||||||| ||||||||||| |||||||| Sbjct: 523 aagaacatccacaaaggcaagcatggaagcgattc 557 Score = 44.1 bits (22), Expect = 0.99 Identities = 25/26 (96%) Strand = Plus / Plus Query: 315 agcacgccgccttcttcgaccgcaac 340 |||||| ||||||||||||||||||| Sbjct: 335 agcacgtcgccttcttcgaccgcaac 360
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 46.1 bits (23), Expect = 0.25 Identities = 26/27 (96%) Strand = Plus / Plus Query: 195 accccgacctgcaggagcagctcgcca 221 |||||| |||||||||||||||||||| Sbjct: 4932979 accccgccctgcaggagcagctcgcca 4933005
>ref|NM_001063839.1| Oryza sativa (japonica cultivar-group) Os06g0254700 (Os06g0254700) mRNA, complete cds Length = 1063 Score = 46.1 bits (23), Expect = 0.25 Identities = 32/35 (91%) Strand = Plus / Plus Query: 500 aagaacatccacaggggcaagcatgggagcgattc 534 ||||||||||||| ||||||||||| |||||||| Sbjct: 524 aagaacatccacaaaggcaagcatggaagcgattc 558 Score = 44.1 bits (22), Expect = 0.99 Identities = 25/26 (96%) Strand = Plus / Plus Query: 315 agcacgccgccttcttcgaccgcaac 340 |||||| ||||||||||||||||||| Sbjct: 336 agcacgtcgccttcttcgaccgcaac 361
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 46.1 bits (23), Expect = 0.25 Identities = 32/35 (91%) Strand = Plus / Minus Query: 500 aagaacatccacaggggcaagcatgggagcgattc 534 ||||||||||||| ||||||||||| |||||||| Sbjct: 8024035 aagaacatccacaaaggcaagcatggaagcgattc 8024001 Score = 44.1 bits (22), Expect = 0.99 Identities = 25/26 (96%) Strand = Plus / Minus Query: 315 agcacgccgccttcttcgaccgcaac 340 |||||| ||||||||||||||||||| Sbjct: 8025157 agcacgtcgccttcttcgaccgcaac 8025132
>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046H10 Length = 155544 Score = 46.1 bits (23), Expect = 0.25 Identities = 32/35 (91%) Strand = Plus / Minus Query: 500 aagaacatccacaggggcaagcatgggagcgattc 534 ||||||||||||| ||||||||||| |||||||| Sbjct: 131553 aagaacatccacaaaggcaagcatggaagcgattc 131519 Score = 44.1 bits (22), Expect = 0.99 Identities = 25/26 (96%) Strand = Plus / Minus Query: 315 agcacgccgccttcttcgaccgcaac 340 |||||| ||||||||||||||||||| Sbjct: 132675 agcacgtcgccttcttcgaccgcaac 132650
>dbj|AP003490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0592E11 Length = 153734 Score = 46.1 bits (23), Expect = 0.25 Identities = 32/35 (91%) Strand = Plus / Minus Query: 500 aagaacatccacaggggcaagcatgggagcgattc 534 ||||||||||||| ||||||||||| |||||||| Sbjct: 47804 aagaacatccacaaaggcaagcatggaagcgattc 47770 Score = 44.1 bits (22), Expect = 0.99 Identities = 25/26 (96%) Strand = Plus / Minus Query: 315 agcacgccgccttcttcgaccgcaac 340 |||||| ||||||||||||||||||| Sbjct: 48926 agcacgtcgccttcttcgaccgcaac 48901
>dbj|AK104598.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-F08, full insert sequence Length = 1063 Score = 46.1 bits (23), Expect = 0.25 Identities = 32/35 (91%) Strand = Plus / Plus Query: 500 aagaacatccacaggggcaagcatgggagcgattc 534 ||||||||||||| ||||||||||| |||||||| Sbjct: 524 aagaacatccacaaaggcaagcatggaagcgattc 558 Score = 44.1 bits (22), Expect = 0.99 Identities = 25/26 (96%) Strand = Plus / Plus Query: 315 agcacgccgccttcttcgaccgcaac 340 |||||| ||||||||||||||||||| Sbjct: 336 agcacgtcgccttcttcgaccgcaac 361
>dbj|AK073727.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057G06, full insert sequence Length = 1064 Score = 46.1 bits (23), Expect = 0.25 Identities = 32/35 (91%) Strand = Plus / Plus Query: 500 aagaacatccacaggggcaagcatgggagcgattc 534 ||||||||||||| ||||||||||| |||||||| Sbjct: 525 aagaacatccacaaaggcaagcatggaagcgattc 559 Score = 44.1 bits (22), Expect = 0.99 Identities = 25/26 (96%) Strand = Plus / Plus Query: 315 agcacgccgccttcttcgaccgcaac 340 |||||| ||||||||||||||||||| Sbjct: 337 agcacgtcgccttcttcgaccgcaac 362
>dbj|AK060792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E03, full insert sequence Length = 2067 Score = 46.1 bits (23), Expect = 0.25 Identities = 32/35 (91%) Strand = Plus / Plus Query: 500 aagaacatccacaggggcaagcatgggagcgattc 534 ||||||||||||| ||||||||||| |||||||| Sbjct: 1574 aagaacatccacaaaggcaagcatggaagcgattc 1608 Score = 44.1 bits (22), Expect = 0.99 Identities = 25/26 (96%) Strand = Plus / Plus Query: 315 agcacgccgccttcttcgaccgcaac 340 |||||| ||||||||||||||||||| Sbjct: 1386 agcacgtcgccttcttcgaccgcaac 1411
>emb|CT835909.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN090D05, full insert sequence Length = 714 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 327 tcttcgaccgcaacggcgacgg 348 |||||||||||||||||||||| Sbjct: 285 tcttcgaccgcaacggcgacgg 306
>emb|CT835887.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA060O09, full insert sequence Length = 871 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 327 tcttcgaccgcaacggcgacgg 348 |||||||||||||||||||||| Sbjct: 479 tcttcgaccgcaacggcgacgg 500
>emb|CT828454.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN010A13, full insert sequence Length = 860 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 327 tcttcgaccgcaacggcgacgg 348 |||||||||||||||||||||| Sbjct: 479 tcttcgaccgcaacggcgacgg 500
>dbj|AK243313.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100056E21, full insert sequence Length = 838 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 327 tcttcgaccgcaacggcgacgg 348 |||||||||||||||||||||| Sbjct: 457 tcttcgaccgcaacggcgacgg 478
>ref|NM_001069691.1| Oryza sativa (japonica cultivar-group) Os09g0412300 (Os09g0412300) mRNA, complete cds Length = 486 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 327 tcttcgaccgcaacggcgacgg 348 |||||||||||||||||||||| Sbjct: 299 tcttcgaccgcaacggcgacgg 320
>gb|AC186960.7| Canis Familiaris chromosome 9, clone XX-197N9, complete sequence Length = 186499 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 427 actcctccacctcgtcctcact 448 |||||||||||||||||||||| Sbjct: 130060 actcctccacctcgtcctcact 130081
>emb|CR848736.10| Zebrafish DNA sequence from clone DKEY-20J3 in linkage group 12, complete sequence Length = 197662 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 503 aacatccacaggggcaagcatg 524 |||||||||||||||||||||| Sbjct: 39179 aacatccacaggggcaagcatg 39200
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Minus Query: 327 tcttcgaccgcaacggcgacgg 348 |||||||||||||||||||||| Sbjct: 14581136 tcttcgaccgcaacggcgacgg 14581115
>emb|CR385067.9| Zebrafish DNA sequence from clone CH211-79A21 in linkage group 12, complete sequence Length = 203410 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Minus Query: 503 aacatccacaggggcaagcatg 524 |||||||||||||||||||||| Sbjct: 56623 aacatccacaggggcaagcatg 56602
>gb|AF325719.1|AF325719 Pennisetum ciliare calmodulin-like protein mRNA, complete cds Length = 965 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Plus Query: 327 tcttcgaccgcaacggcgacgg 348 |||||||||||||||||||||| Sbjct: 176 tcttcgaccgcaacggcgacgg 197
>dbj|AP005093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1294_G06 Length = 115468 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Minus Query: 327 tcttcgaccgcaacggcgacgg 348 |||||||||||||||||||||| Sbjct: 79425 tcttcgaccgcaacggcgacgg 79404
>dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0643D11 Length = 137525 Score = 44.1 bits (22), Expect = 0.99 Identities = 22/22 (100%) Strand = Plus / Minus Query: 327 tcttcgaccgcaacggcgacgg 348 |||||||||||||||||||||| Sbjct: 2803 tcttcgaccgcaacggcgacgg 2782
>gb|CP000438.1| Pseudomonas aeruginosa UCBPP-PA14, complete genome Length = 6537648 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 779 ggcagcctgttcgagcgcctg 799 ||||||||||||||||||||| Sbjct: 3827562 ggcagcctgttcgagcgcctg 3827542
>ref|NM_001049681.1| Oryza sativa (japonica cultivar-group) Os01g0505600 (Os01g0505600) mRNA, complete cds Length = 890 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 cttcgaccgcaacggcgacgg 348 ||||||||||||||||||||| Sbjct: 247 cttcgaccgcaacggcgacgg 267
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 779 ggcagcctgttcgagcgcctg 799 ||||||||||||||||||||| Sbjct: 1807253 ggcagcctgttcgagcgcctg 1807273
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 cgtgctccagcagcacgccgc 324 ||||||||||||||||||||| Sbjct: 1426241 cgtgctccagcagcacgccgc 1426261
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 835 agccgcgcgcagtcgagaccg 855 ||||||||||||||||||||| Sbjct: 1408727 agccgcgcgcagtcgagaccg 1408707
>gb|AY022639.1| Oryza sativa microsatellite MRG4964 containing (CAG)X10, closest to marker C585, genomic sequence Length = 230 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 cttcgaccgcaacggcgacgg 348 ||||||||||||||||||||| Sbjct: 184 cttcgaccgcaacggcgacgg 204
>gb|AY484589.1| Musa acuminata clone MuH9, genomic sequence Length = 82723 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 329 ttcgaccgcaacggcgacggg 349 ||||||||||||||||||||| Sbjct: 46332 ttcgaccgcaacggcgacggg 46352
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 ccgccgccatgtcgtcgtcga 134 ||||||||||||||||||||| Sbjct: 1904917 ccgccgccatgtcgtcgtcga 1904937
>gb|AC068647.10| Homo sapiens 3 BAC RP11-64D22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 132745 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 989 actggaatttgtactgttatt 1009 ||||||||||||||||||||| Sbjct: 39372 actggaatttgtactgttatt 39392
>gb|AC125629.1| Homo sapiens 12 BAC RP11-359K6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 139793 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 965 ttttcatctgtcttcatattt 985 ||||||||||||||||||||| Sbjct: 89750 ttttcatctgtcttcatattt 89770
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 cttcgaccgcaacggcgacgg 348 ||||||||||||||||||||| Sbjct: 17577570 cttcgaccgcaacggcgacgg 17577590
>dbj|AP003054.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436D06 Length = 148246 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 cttcgaccgcaacggcgacgg 348 ||||||||||||||||||||| Sbjct: 95142 cttcgaccgcaacggcgacgg 95162
>dbj|AK072726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139K02, full insert sequence Length = 891 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 cttcgaccgcaacggcgacgg 348 ||||||||||||||||||||| Sbjct: 248 cttcgaccgcaacggcgacgg 268 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 161,327,589 Number of extensions: 8685641 Number of successful extensions: 170850 Number of sequences better than 10.0: 53 Number of HSP's gapped: 170839 Number of HSP's successfully gapped: 91 Length of query: 1035 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1012 Effective length of database: 18,503,978,556 Effective search space: 18726026298672 Effective search space used: 18726026298672 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)