ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf98o04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK107757:Os08g0535900 | 30 | 0.29 | 2 | Os01g0927400:Os01g0927400 | 28 | 1.9 | 3 | AK104697:Os07g0264800 | 28 | 1.9 | 4 | AK066403:Os07g0264800 | 28 | 1.9 | 5 | AK065486:Os05g0502800 | 27 | 3.2 | 6 | AK064242:Os05g0502800 | 27 | 3.2 | 7 | AK064603:Os12g0111000 | 26 | 5.5 | 8 | AK108032:Os04g0587900 | 26 | 5.5 | 9 | Os08g0130300:Os08g0130300 | 26 | 7.2 | 10 | Y18349: | 26 | 7.2 | 11 | AK099481: | 26 | 7.2 | 12 | AK062560: | 26 | 7.2 | 13 | AK120995:Os08g0541500 | 26 | 7.2 | 14 | AK107080:Os06g0590500 | 26 | 7.2 | 15 | AK060560:Os08g0163500 | 26 | 7.2 | 16 | AK103215:Os11g0244800 | 25 | 9.4 | 17 | AK102165:Os03g0663700 | 25 | 9.4 | 18 | AK099483:Os04g0467800 | 25 | 9.4 | 19 | AK070587:Os01g0940600 | 25 | 9.4 | 20 | AK063345:Os03g0735200 | 25 | 9.5 |
|---|
>AK107757:Os08g0535900 | Length = 72 Score = 30.4 bits (67), Expect = 0.29 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Frame = -2 Query: 171 TARAVERRRGRKGAVNRTQAESKRKECMHCPTNEPGTRPGSRPQPNN--QVVH 19 TA RRR A R QA S C C + GT P +PQP+N ++VH Sbjct: 3 TATGRARRRPASFASRRCQASSATG-CRCCSSEISGTLPILQPQPSNPAEIVH 54
>Os01g0927400:Os01g0927400 | Length = 760 Score = 27.7 bits (60), Expect = 1.9 Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Frame = +2 Query: 20 WTTWLLGWGRDPGLVPGS--FVGQCMHSFLFDSACVL 124 ++ W +GW DPG+ S +V + ++S+L S C + Sbjct: 393 YSDWDIGWCNDPGMRKKSTFYVVEILNSYLKGSGCTV 429
>AK104697:Os07g0264800 | Length = 294 Score = 27.7 bits (60), Expect = 1.9 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = -3 Query: 179 THVQREQWNGGGEEKEQ*TERKRNRRGRSACTVQRTNQEQGQGLA 45 T + R + G G++ R+R RR R AC + +E+ G+A Sbjct: 34 TPLPRCRHGGAGKKSRLLVARRRGRRDRVACLPTKEEEEEEVGVA 78
>AK066403:Os07g0264800 | Length = 294 Score = 27.7 bits (60), Expect = 1.9 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = -3 Query: 179 THVQREQWNGGGEEKEQ*TERKRNRRGRSACTVQRTNQEQGQGLA 45 T + R + G G++ R+R RR R AC + +E+ G+A Sbjct: 34 TPLPRCRHGGAGKKSRLLVARRRGRRDRVACLPTKEEEEEEVGVA 78
>AK065486:Os05g0502800 | Length = 681 Score = 26.9 bits (58), Expect = 3.2 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = -1 Query: 187 QDSLMYSESSGTEEGKKRSSEQNASGIEEE 98 ++S S SS EE K+ SSE ++S EEE Sbjct: 176 EESSEASSSSDEEEDKRESSEASSSSDEEE 205
>AK064242:Os05g0502800 | Length = 681 Score = 26.9 bits (58), Expect = 3.2 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = -1 Query: 187 QDSLMYSESSGTEEGKKRSSEQNASGIEEE 98 ++S S SS EE K+ SSE ++S EEE Sbjct: 176 EESSEASSSSDEEEDKRESSEASSSSDEEE 205
>AK064603:Os12g0111000 | Length = 420 Score = 26.2 bits (56), Expect = 5.5 Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 5/57 (8%) Frame = -2 Query: 174 CTARAVER-----RRGRKGAVNRTQAESKRKECMHCPTNEPGTRPGSRPQPNNQVVH 19 CT R RRG +G R E R+ + RP P P +QV H Sbjct: 221 CTTRGTATCSAPPRRGGRGGARREGVEGPRRRRWRGLRHAAQDRPHLAPPPADQVCH 277
>AK108032:Os04g0587900 | Length = 329 Score = 26.2 bits (56), Expect = 5.5 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -3 Query: 143 EEKEQ*TERKRNRRGRSACTVQRTNQEQGQ 54 EE+EQ ER R R R+ ++RT +E Q Sbjct: 234 EEREQERERAREERERALEEMERTRKEMEQ 263
>Os08g0130300:Os08g0130300 | Length = 815 Score = 25.8 bits (55), Expect = 7.2 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -1 Query: 214 FANRMSTRLQDSLMYSESSGTEEGKKRSSEQNAS 113 ++NR+S RL S + + GTE+ RSS S Sbjct: 567 YSNRVSQRLDTSHLSDRAEGTEQPPWRSSTAQRS 600
>Y18349: | Length = 290 Score = 25.8 bits (55), Expect = 7.2 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Frame = -1 Query: 214 FANRMSTRLQDSLMYSESSGTEE---GKKRSSEQNASGIEEEGVHALSNERTRNKAR 53 + R S+R +D Y + G +RSSE++ S + +G RTR+ R Sbjct: 212 YDRRSSSRSRDHDDYYRGGSHDYYRGGSRRSSERHRSSYDSDGSRRRHRSRTRSPVR 268
>AK099481: | Length = 290 Score = 25.8 bits (55), Expect = 7.2 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Frame = -1 Query: 214 FANRMSTRLQDSLMYSESSGTEE---GKKRSSEQNASGIEEEGVHALSNERTRNKAR 53 + R S+R +D Y + G +RSSE++ S + +G RTR+ R Sbjct: 212 YDRRSSSRSRDHDDYYRGGSHDYYRGGSRRSSERHRSSYDSDGSRRRHRSRTRSPVR 268
>AK062560: | Length = 290 Score = 25.8 bits (55), Expect = 7.2 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Frame = -1 Query: 214 FANRMSTRLQDSLMYSESSGTEE---GKKRSSEQNASGIEEEGVHALSNERTRNKAR 53 + R S+R +D Y + G +RSSE++ S + +G RTR+ R Sbjct: 212 YDRRSSSRSRDHDDYYRGGSHDYYRGGSRRSSERHRSSYDSDGSRRRHRSRTRSPVR 268
>AK120995:Os08g0541500 | Length = 733 Score = 25.8 bits (55), Expect = 7.2 Identities = 15/48 (31%), Positives = 27/48 (56%) Frame = -1 Query: 199 STRLQDSLMYSESSGTEEGKKRSSEQNASGIEEEGVHALSNERTRNKA 56 +T + DSL + ++ T RS+ A+ ++EE + A++ ER R A Sbjct: 469 ATVVTDSLTKATATSTATSPDRSTPSEAAAVDEESL-AVAVERRRRAA 515
>AK107080:Os06g0590500 | Length = 308 Score = 25.8 bits (55), Expect = 7.2 Identities = 18/50 (36%), Positives = 23/50 (46%) Frame = -3 Query: 200 EYKATRFTHVQREQWNGGGEEKEQ*TERKRNRRGRSACTVQRTNQEQGQG 51 EYK T V R + GE+ E T G S +Q+ QEQG+G Sbjct: 156 EYKET----VARRYYTVTGEKAEDSTIDSLIESGESESFLQKAIQEQGRG 201
>AK060560:Os08g0163500 | Length = 439 Score = 25.8 bits (55), Expect = 7.2 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%) Frame = -3 Query: 185 RFTHVQREQWNG-GGEEKEQ*TERKRNRRG 99 R +H + W+ GGEEKE R+R R+G Sbjct: 193 RGSHSDQLYWSSSGGEEKEAEMMRRRERKG 222
>AK103215:Os11g0244800 | Length = 254 Score = 25.4 bits (54), Expect = 9.4 Identities = 8/22 (36%), Positives = 16/22 (72%) Frame = -2 Query: 78 TNEPGTRPGSRPQPNNQVVHLP 13 +N+ GT+P +P+PN++ +P Sbjct: 154 SNKSGTKPSRQPEPNSRGPKMP 175
>AK102165:Os03g0663700 | Length = 274 Score = 25.4 bits (54), Expect = 9.4 Identities = 13/54 (24%), Positives = 23/54 (42%) Frame = -2 Query: 177 SCTARAVERRRGRKGAVNRTQAESKRKECMHCPTNEPGTRPGSRPQPNNQVVHL 16 SC R + G KG+++ + + + C C G + G + N VV + Sbjct: 35 SCVGRGLMGYLGNKGSISISMSLHQTSFCFVCTHLTSGQKDGDELRRNADVVEI 88
>AK099483:Os04g0467800 | Length = 430 Score = 25.4 bits (54), Expect = 9.4 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = -2 Query: 168 ARAVERRRGRKGAVNRTQAESKRKECMHCPTNEPGTRPGSR 46 A A ER+R R G V + A S + ++ P + PG+R Sbjct: 4 AAAPERKRPRDGDVGPSTAASGEAQYVYLPIADALKAPGAR 44
>AK070587:Os01g0940600 | Length = 145 Score = 25.4 bits (54), Expect = 9.4 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = -1 Query: 166 ESSGTEEGKKRSSEQNASGIEEEGVHALSNERTRNKAR 53 E G E ++ +EQ A +E+EGV + RTRN+ + Sbjct: 105 EQDGGGEEEEEDAEQPAP-VEKEGVLVAAAPRTRNRPK 141
>AK063345:Os03g0735200 | Length = 352 Score = 25.4 bits (54), Expect = 9.5 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = -3 Query: 152 GGGEEKEQ*TERKRNRRGRSACTVQRTNQEQGQG 51 GGG + R+R RRGR +Q + Q +G Sbjct: 309 GGGGRRRARQARRRPRRGRVRAALQHLPRRQPEG 342 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 6,622,524 Number of extensions: 123396 Number of successful extensions: 596 Number of sequences better than 10.0: 20 Number of HSP's gapped: 592 Number of HSP's successfully gapped: 20 Length of query: 100 Length of database: 15,399,855 Length adjustment: 70 Effective length of query: 30 Effective length of database: 12,596,985 Effective search space: 377909550 Effective search space used: 377909550 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
