ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf98o04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q2H085:DDI1_CHAGB DNA damage-inducible protein 1 - Chaetomium gl... 30 2.6
2Q863A2:TBX2_CANFA T-box transcription factor TBX2 - Canis famili... 29 5.7
3Q12626:EXG_PICAN Glucan 1,3-beta-glucosidase precursor - Pichia ... 29 5.7
4P50764:VE1_HPV29 Replication protein E1 - Human papillomavirus t... 28 7.5
5Q13207:TBX2_HUMAN T-box transcription factor TBX2 - Homo sapiens... 28 7.5
6Q7NFD9:QUEA_GLOVI S-adenosylmethionine:tRNA ribosyltransferase-i... 28 7.5
7P26377:STP2_BOVIN Nuclear transition protein 2 - Bos taurus (Bov... 28 9.8
8Q3UVG3:F91A1_MOUSE Protein FAM91A1 - Mus musculus (Mouse) 28 9.8

>Q2H085:DDI1_CHAGB DNA damage-inducible protein 1 - Chaetomium globosum (Soil fungus)|
          Length = 444
 Score = 30.0 bits (66), Expect = 2.6
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = -2

Query: 171 TARAVERRRGRKGAVNRTQAESKRKECMHCPTNEPGTRPGSRPQP 37
           T  AVER     G    T  +  R   +H P+ + G  P  RPQP
Sbjct: 338 TEEAVEREPTVPGPAGTTIGQ--RSGAVHAPSGQSGAAPAQRPQP 380



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>Q863A2:TBX2_CANFA T-box transcription factor TBX2 - Canis familiaris (Dog)|
          Length = 702

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = -2

Query: 123 RTQAESKRKECMHCPTNEPGTRPGSRPQP 37
           R  AES    C   P  EP   PGS P P
Sbjct: 305 RDGAESDASSCDPAPAREPPASPGSAPSP 333



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>Q12626:EXG_PICAN Glucan 1,3-beta-glucosidase precursor - Pichia angusta (Yeast)|
           (Hansenula polymorpha)
          Length = 435

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -1

Query: 220 SLFANRMSTRLQDSLMYSESSGTEEGKKRSSEQNASGIEEEGVHALSN 77
           SLF    S    D   Y+E+ G EE +KR  E  ++ I+EE    ++N
Sbjct: 67  SLFEAVSSDVPVDEYHYTEALGKEEAEKRLQEHWSTWIKEEDFKGMAN 114



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>P50764:VE1_HPV29 Replication protein E1 - Human papillomavirus type 29|
          Length = 660

 Score = 28.5 bits (62), Expect = 7.5
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -1

Query: 172 YSESSGTEEGKKRSSEQNASGIEEEGVHALSNERTRNKARV 50
           Y E SGT++G+  S E+  +G + E    LS E  +    V
Sbjct: 165 YKEGSGTKDGENGSQEEERAGGDGEESQPLSTETEKGACGV 205



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>Q13207:TBX2_HUMAN T-box transcription factor TBX2 - Homo sapiens (Human)|
          Length = 702

 Score = 28.5 bits (62), Expect = 7.5
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -2

Query: 123 RTQAESKRKECMHCPTNEPGTRPGSRPQP 37
           R  AES    C   P  EP T PG+ P P
Sbjct: 305 RDGAESDASSCDPPPAREPPTSPGAAPSP 333



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>Q7NFD9:QUEA_GLOVI S-adenosylmethionine:tRNA ribosyltransferase-isomerase -|
           Gloeobacter violaceus
          Length = 352

 Score = 28.5 bits (62), Expect = 7.5
 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = -2

Query: 189 YKIHSCTARAVERRRGRKGAVNRTQAESKRK-ECMHCPTNEPGTRPG 52
           Y+I   TA A+ER R R G V      S R  E    P   P T PG
Sbjct: 235 YEIPEATAIAIERTRSRGGRVLAVGTTSARALESAAQPNGLPATGPG 281



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>P26377:STP2_BOVIN Nuclear transition protein 2 - Bos taurus (Bovine)|
          Length = 132

 Score = 28.1 bits (61), Expect = 9.8
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
 Frame = -2

Query: 195 QGYKIHSCTARAVERRRGRKGAVNRTQAESKRKECMHCPTNEPGTRPGSRP--QPNNQVV 22
           Q +  H C+     + R R  +  R+++ S+R      PT   G  PG  P  + +   +
Sbjct: 22  QSHACHHCSCSQHCQSRSRSRSC-RSRSSSRRPRSHRSPTGRQGQSPGPSPPLRRHRHTM 80

Query: 21  HLPCCP 4
           H   CP
Sbjct: 81  HSHQCP 86



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>Q3UVG3:F91A1_MOUSE Protein FAM91A1 - Mus musculus (Mouse)|
          Length = 837

 Score = 28.1 bits (61), Expect = 9.8
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 11  QGRWTTWLLGWGRDPGLVPGSFVGQCMHSFLFDSACVL 124
           QG     +  WG DPG+VP S V   ++  L  SA ++
Sbjct: 565 QGYDRLLITSWGHDPGVVPASNVLTMLNDALTHSAVLI 602


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 40,010,158
Number of extensions: 688808
Number of successful extensions: 2537
Number of sequences better than 10.0: 8
Number of HSP's gapped: 2531
Number of HSP's successfully gapped: 8
Length of query: 100
Length of database: 100,686,439
Length adjustment: 69
Effective length of query: 31
Effective length of database: 81,760,084
Effective search space: 2534562604
Effective search space used: 2534562604
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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