ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf98o04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_001216269.1| Aspergillus terreus NIH2624 predicted protei... 40 4.3
2gb|AC115948.12| Mus musculus chromosome 16, clone RP24-568J12, c... 40 4.3
3gb|AC011459.5| Homo sapiens chromosome 19 clone CTC-416D1, compl... 40 4.3
4gb|AC007953.21| Homo sapiens 3 BAC RP11-2L8 (Roswell Park Cancer... 40 4.3
5gb|AC073576.23| Homo sapiens 12 BAC RP11-363M20 (Roswell Park Ca... 40 4.3
6gb|AC103549.6| Homo sapiens 3 BAC RP11-795G18 (Roswell Park Canc... 40 4.3
7emb|AL353680.8| Human DNA sequence from clone RP11-252M21 on chr... 40 4.3
8emb|BX295540.1|NC49D12 Neurospora crassa DNA linkage group VI Co... 40 4.3
9gb|AC008738.7| Homo sapiens chromosome 19 clone CTD-2540B15, com... 40 4.3
10emb|AL355916.2|CNS05TD1 Human chromosome 14 DNA sequence BAC R-4... 40 4.3
11emb|AL807829.21| Zebrafish DNA sequence from clone CH211-246M4 i... 40 4.3

>ref|XM_001216269.1| Aspergillus terreus NIH2624 predicted protein (ATEG_07648) mRNA,
           complete cds
          Length = 387
 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 124 gttcactgctccttttcttcccct 147
           |||| |||||||||||||||||||
Sbjct: 307 gttctctgctccttttcttcccct 284



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>gb|AC115948.12| Mus musculus chromosome 16, clone RP24-568J12, complete sequence
          Length = 212604

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 141   ttcccctcctccgttccactgctc 164
             |||||||||||| |||||||||||
Sbjct: 77691 ttcccctcctcccttccactgctc 77714



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>gb|AC011459.5| Homo sapiens chromosome 19 clone CTC-416D1, complete sequence
          Length = 85297

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   tccttttcttcccctcctcc 152
             ||||||||||||||||||||
Sbjct: 68763 tccttttcttcccctcctcc 68744



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>gb|AC007953.21| Homo sapiens 3 BAC RP11-2L8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 152210

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   ccttttcttcccctcctccg 153
             ||||||||||||||||||||
Sbjct: 85736 ccttttcttcccctcctccg 85755



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>gb|AC073576.23| Homo sapiens 12 BAC RP11-363M20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 180309

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    tcttgtagccttgtactcat 202
              ||||||||||||||||||||
Sbjct: 127429 tcttgtagccttgtactcat 127410



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>gb|AC103549.6| Homo sapiens 3 BAC RP11-795G18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 165139

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    ccttttcttcccctcctccg 153
              ||||||||||||||||||||
Sbjct: 128889 ccttttcttcccctcctccg 128870



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>emb|AL353680.8| Human DNA sequence from clone RP11-252M21 on chromosome 13 Contains a
             novel FLJ31073 containing gene, six novel genes and a CpG
             island, complete sequence
          Length = 176930

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 180   gaatcttgtagccttgtact 199
             ||||||||||||||||||||
Sbjct: 87351 gaatcttgtagccttgtact 87332



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>emb|BX295540.1|NC49D12 Neurospora crassa DNA linkage group VI Cosmid contig 49D12
          Length = 95032

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   ccttttcttcccctcctccg 153
             ||||||||||||||||||||
Sbjct: 82918 ccttttcttcccctcctccg 82899



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>gb|AC008738.7| Homo sapiens chromosome 19 clone CTD-2540B15, complete sequence
          Length = 219821

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 129    ctgctccttttcttcccctcctcc 152
              |||||||| |||||||||||||||
Sbjct: 117624 ctgctcctcttcttcccctcctcc 117601



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>emb|AL355916.2|CNS05TD1 Human chromosome 14 DNA sequence BAC R-47I22 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 178484

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    tcttgtagccttgtactcat 202
              ||||||||||||||||||||
Sbjct: 116153 tcttgtagccttgtactcat 116134



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>emb|AL807829.21| Zebrafish DNA sequence from clone CH211-246M4 in linkage group 9,
             complete sequence
          Length = 166114

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   ttcactgctccttttcttcc 144
             ||||||||||||||||||||
Sbjct: 15103 ttcactgctccttttcttcc 15084


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 41,193,225
Number of extensions: 2180219
Number of successful extensions: 157672
Number of sequences better than 10.0: 11
Number of HSP's gapped: 157672
Number of HSP's successfully gapped: 11
Length of query: 301
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 279
Effective length of database: 18,508,616,841
Effective search space: 5163904098639
Effective search space used: 5163904098639
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 13 (26.3 bits)
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