ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf93h20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ245252.1| Zea mays clone 14046 mRNA sequence Length = 764 Score = 262 bits (132), Expect = 1e-66 Identities = 165/176 (93%) Strand = Plus / Plus Query: 264 atcaagctccggtggttccgcagcgccatgtggcgcctggccgagctctgcgtgacggtg 323 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 266 atcaagctccggtggttccggagcgccatgtggcgcctggccgagctctgcgtggcggtg 325 Query: 324 ctgtcgggccctccggggacgcccgacgcaccgccgtcgtggacgggagtggagccgtgc 383 |||||||| || ||||||||| ||||||| |||||||||||||| || |||||||||||| Sbjct: 326 ctgtcggggcccccggggacggccgacgccccgccgtcgtggaccggcgtggagccgtgc 385 Query: 384 ttcgccgcgccattcctgccggccgcgctggtgaggcgcccggggcaggactagct 439 ||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 386 ttcgccgcgcccttcctgccggccgcgctggtgaggcgcgcggggcaggagtagct 441 Score = 103 bits (52), Expect = 8e-19 Identities = 95/107 (88%), Gaps = 8/107 (7%) Strand = Plus / Plus Query: 25 agctgagcccactgtaccgcctctgcctgcaccaaccaagaaagcaaagccaagcccaat 84 ||||||||| ||||| | ||||||||||||||||||||||||||||||||| |||| Sbjct: 23 agctgagcctactgtgctgcctctgcctgcaccaaccaagaaagcaaagcc-----caat 77 Query: 85 caagaagacgaggaggaagaatgggggaggcgccgtgcagcgtggtg 131 |||||||| || |||| ||||||||||||||||||||||||||||| Sbjct: 78 caagaagaaga--agga-gaatgggggaggcgccgtgcagcgtggtg 121 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 480 catgaagacgacggcactaatgtatatacgctactcgctactgctcaatggagaagtaga 539 ||||||||| || ||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 474 catgaagacaacaacactaatgtatatacagtactcactactgctcaatggagaagtaga 533 Query: 540 tt 541 || Sbjct: 534 tt 535 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 556 tggagaagtagattgatatgtaacga 581 |||||||||||||||||||||||||| Sbjct: 522 tggagaagtagattgatatgtaacga 547
>emb|CT835075.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN052P05, full insert sequence Length = 693 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 269 gctccggtggttccgcagcgccatgtggcgcctggccgagctctgcgtgacggtgctgtc 328 |||||||||| ||||| ||||| ||||||| || || ||||||||||| ||| |||||| Sbjct: 269 gctccggtggctccgccgcgccgtgtggcggctcgcggagctctgcgtcgcggcgctgtc 328 Query: 329 gggccc 334 ||||| Sbjct: 329 tggccc 334
>emb|CR855182.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0140O07, complete sequence Length = 78789 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 269 gctccggtggttccgcagcgccatgtggcgcctggccgagctctgcgtgacggtgctgtc 328 |||||||||| ||||| ||||| ||||||| || || ||||||||||| ||| |||||| Sbjct: 40692 gctccggtggctccgccgcgccgtgtggcggctcgcggagctctgcgtcgcggcgctgtc 40633 Query: 329 gggccc 334 ||||| Sbjct: 40632 tggccc 40627
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 269 gctccggtggttccgcagcgccatgtggcgcctggccgagctctgcgtgacggtgctgtc 328 |||||||||| ||||| ||||| ||||||| || || ||||||||||| ||| |||||| Sbjct: 22205945 gctccggtggctccgccgcgccgtgtggcggctcgcggagctctgcgtcgcggcgctgtc 22205886 Query: 329 gggccc 334 ||||| Sbjct: 22205885 tggccc 22205880
>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08, complete sequence Length = 118959 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 269 gctccggtggttccgcagcgccatgtggcgcctggccgagctctgcgtgacggtgctgtc 328 |||||||||| ||||| ||||| ||||||| || || ||||||||||| ||| |||||| Sbjct: 75806 gctccggtggctccgccgcgccgtgtggcggctcgcggagctctgcgtcgcggcgctgtc 75747 Query: 329 gggccc 334 ||||| Sbjct: 75746 tggccc 75741
>gb|AC079357.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0033D06, complete sequence Length = 142659 Score = 48.1 bits (24), Expect = 0.039 Identities = 42/48 (87%) Strand = Plus / Minus Query: 269 gctccggtggttccgcagcgccatgtggcgcctggccgagctctgcgt 316 |||||||||| ||||| ||||| ||||||| || || ||||||||||| Sbjct: 104068 gctccggtggctccgccgcgccgtgtggcggctcgcggagctctgcgt 104021
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 48.1 bits (24), Expect = 0.039 Identities = 42/48 (87%) Strand = Plus / Minus Query: 269 gctccggtggttccgcagcgccatgtggcgcctggccgagctctgcgt 316 |||||||||| ||||| ||||| ||||||| || || ||||||||||| Sbjct: 1791339 gctccggtggctccgccgcgccgtgtggcggctcgcggagctctgcgt 1791292
>gb|AY378100.1| Klebsiella pneumoniae plasmid pLVPK, complete sequence Length = 219385 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 397 tcctgccggccgcgctggtgagg 419 ||||||||||||||||||||||| Sbjct: 38557 tcctgccggccgcgctggtgagg 38579
>dbj|AP006726.1| Klebsiella pneumoniae NTUH-K2044 plasmid pK2044 DNA, complete genome Length = 224152 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 397 tcctgccggccgcgctggtgagg 419 ||||||||||||||||||||||| Sbjct: 186964 tcctgccggccgcgctggtgagg 186986
>ref|XM_584347.2| PREDICTED: Bos taurus hypothetical LOC539029 (LOC539029), mRNA Length = 3360 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 86 aagaagacgaggaggaagaatgggg 110 ||||||| ||||||||||||||||| Sbjct: 2747 aagaagaggaggaggaagaatgggg 2771
>ref|XM_811341.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507049.179) partial mRNA Length = 3402 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 81 caatcaagaagacgaggaggaagaa 105 |||| |||||||||||||||||||| Sbjct: 1866 caatgaagaagacgaggaggaagaa 1890
>ref|XM_803117.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053504009.60) partial mRNA Length = 3405 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 81 caatcaagaagacgaggaggaagaa 105 |||| |||||||||||||||||||| Sbjct: 1860 caatgaagaagacgaggaggaagaa 1884
>ref|NM_214643.1| Strongylocentrotus purpuratus heat shock protein gp96 (Gp96), mRNA gb|AY187547.1| Strongylocentrotus purpuratus heat shock protein gp96 mRNA, complete cds Length = 2497 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 86 aagaagacgaggaggaagaat 106 ||||||||||||||||||||| Sbjct: 2361 aagaagacgaggaggaagaat 2381
>gb|AC159747.8| Mus musculus 10 BAC RP23-416G20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 194198 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 86 aagaagacgaggaggaagaatgggggagg 114 ||||||| |||||||| |||||||||||| Sbjct: 12952 aagaagaggaggaggaggaatgggggagg 12980
>gb|AC153887.6| Mus musculus 10 BAC RP23-473N3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 165306 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 86 aagaagacgaggaggaagaatgggggagg 114 ||||||| |||||||| |||||||||||| Sbjct: 160972 aagaagaggaggaggaggaatgggggagg 161000
>ref|XM_001017359.1| Tetrahymena thermophila SB210 Coatomer WD associated domain containing protein (TTHERM_00476510) mRNA, complete cds Length = 2673 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 82 aatcaagaagacgaggaggaagaa 105 ||||||||||| |||||||||||| Sbjct: 2581 aatcaagaagaagaggaggaagaa 2604
>ref|XM_429729.2| PREDICTED: Gallus gallus hypothetical LOC420051 (LOC420051), mRNA Length = 735 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 caagaagacgaggaggaaga 104 |||||||||||||||||||| Sbjct: 550 caagaagacgaggaggaaga 531
>ref|XR_021687.1| PREDICTED: Pan troglodytes similar to HMGB3 protein (LOC747998), mRNA Length = 1536 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aagaagacgaggaggaagaa 105 |||||||||||||||||||| Sbjct: 578 aagaagacgaggaggaagaa 597
>ref|XM_939877.2| PREDICTED: Homo sapiens similar to high-mobility group box 3 (LOC646993), mRNA Length = 627 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aagaagacgaggaggaagaa 105 |||||||||||||||||||| Sbjct: 551 aagaagacgaggaggaagaa 570
>ref|XM_929965.2| PREDICTED: Homo sapiens similar to high-mobility group box 3 (LOC646993), mRNA Length = 627 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aagaagacgaggaggaagaa 105 |||||||||||||||||||| Sbjct: 551 aagaagacgaggaggaagaa 570
>ref|XR_012185.1| PREDICTED: Macaca mulatta similar to high-mobility group box 3 (LOC710194), mRNA Length = 731 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aagaagacgaggaggaagaa 105 |||||||||||||||||||| Sbjct: 655 aagaagacgaggaggaagaa 674
>ref|XM_964274.1| PREDICTED: Tribolium castaneum similar to Glutamate [NMDA] receptor subunit 3A precursor (N-methyl-D-aspartate receptor subtype NR3A) (NMDAR-L) (LOC657839), mRNA Length = 4392 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aagaagacgaggaggaagaa 105 |||||||||||||||||||| Sbjct: 1778 aagaagacgaggaggaagaa 1797
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 ctgcgatcatgaagacgacg 492 |||||||||||||||||||| Sbjct: 3664672 ctgcgatcatgaagacgacg 3664691
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 tcctgccggccgcgctggtg 416 |||||||||||||||||||| Sbjct: 2707860 tcctgccggccgcgctggtg 2707841
>gb|AC149306.9| Medicago truncatula clone mth2-88b8, complete sequence Length = 89880 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aagaagacgaggaggaagaa 105 |||||||||||||||||||| Sbjct: 9649 aagaagacgaggaggaagaa 9668
>ref|XM_501147.1| Yarrowia lipolytica CLIB122, YALI0B20680g predicted mRNA Length = 2352 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aagaagacgaggaggaagaa 105 |||||||||||||||||||| Sbjct: 2189 aagaagacgaggaggaagaa 2208
>gb|AC147155.2| Mus musculus BAC clone RP24-341L19 from chromosome Y, complete sequence Length = 156459 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aagaagacgaggaggaagaa 105 |||||||||||||||||||| Sbjct: 129257 aagaagacgaggaggaagaa 129276
>gb|AC134831.3| Mus musculus BAC clone RP24-500P4 from chromosome 18, complete sequence Length = 188380 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ctctgcctgcaccaaccaag 64 |||||||||||||||||||| Sbjct: 37936 ctctgcctgcaccaaccaag 37955
>gb|AC122896.4| Mus musculus BAC clone RP23-69N8 from chromosome 10, complete sequence Length = 232473 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 87 agaagacgaggaggaagaatgggggagg 114 |||||| |||||||||||| |||||||| Sbjct: 15884 agaagaggaggaggaagaaggggggagg 15857
>gb|AC162297.5| Mus musculus chromosome 18, clone RP24-276H6, complete sequence Length = 190293 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ctctgcctgcaccaaccaag 64 |||||||||||||||||||| Sbjct: 143158 ctctgcctgcaccaaccaag 143177
>emb|BX950201.12| Zebrafish DNA sequence from clone CH211-101L11 in linkage group 1, complete sequence Length = 167099 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aagaagacgaggaggaagaa 105 |||||||||||||||||||| Sbjct: 132960 aagaagacgaggaggaagaa 132979
>dbj|AK041240.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530094B17 product:unclassifiable, full insert sequence Length = 2802 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 aatcaagaagacgaggaggaagaa 105 ||||||||||| |||||||||||| Sbjct: 730 aatcaagaagaggaggaggaagaa 707
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 ctagcttagctttgctgctg 453 |||||||||||||||||||| Sbjct: 26868486 ctagcttagctttgctgctg 26868467
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 ggaggcgccgtgcagcgtgg 129 |||||||||||||||||||| Sbjct: 2492512 ggaggcgccgtgcagcgtgg 2492493
>gb|AC097067.3| Homo sapiens BAC clone RP11-558N14 from 4, complete sequence Length = 136500 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aagaagacgaggaggaagaa 105 |||||||||||||||||||| Sbjct: 37652 aagaagacgaggaggaagaa 37671
>emb|AL161792.29| Human DNA sequence from clone RP11-84P7 on chromosome 9 Contains a high-mobility group box pseudogene, two novel gene and the 3' end of the RNF38 gene for ring finger protein 38, complete sequence Length = 77027 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 aagaagacgaggaggaagaa 105 |||||||||||||||||||| Sbjct: 13740 aagaagacgaggaggaagaa 13721
>ref|XM_690273.1| PREDICTED: Danio rerio similar to somatostatin receptor type 3 (LOC566989), mRNA Length = 1893 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aagaagacgaggaggaagaa 105 |||||||||||||||||||| Sbjct: 1130 aagaagacgaggaggaagaa 1149
>emb|AL136094.13| Human DNA sequence from clone RP3-527B10 on chromosome 6q25.1-25.3 Contains a high mobility group (nonhistone chromosomal) protein 4 (HMG4) pseudogene, complete sequence Length = 156667 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aagaagacgaggaggaagaa 105 |||||||||||||||||||| Sbjct: 34845 aagaagacgaggaggaagaa 34864
>dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0503D09 Length = 144443 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 ctagcttagctttgctgctg 453 |||||||||||||||||||| Sbjct: 17077 ctagcttagctttgctgctg 17058
>gb|AC119796.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1172F09, complete sequence Length = 106057 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 ggaggcgccgtgcagcgtgg 129 |||||||||||||||||||| Sbjct: 64898 ggaggcgccgtgcagcgtgg 64879
>ref|XM_956693.1| Neurospora crassa OR74A hypothetical protein (NCU07897.1) partial mRNA Length = 1077 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aagaagacgaggaggaagaa 105 |||||||||||||||||||| Sbjct: 128 aagaagacgaggaggaagaa 147
>emb|BX571960.6| Zebrafish DNA sequence from clone DKEY-165I8 in linkage group 3, complete sequence Length = 192501 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 aagaagacgaggaggaagaa 105 |||||||||||||||||||| Sbjct: 58076 aagaagacgaggaggaagaa 58057
>emb|BX248514.3| Zebrafish DNA sequence from clone CH211-237A6 in linkage group 1, complete sequence Length = 165693 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aagaagacgaggaggaagaa 105 |||||||||||||||||||| Sbjct: 136446 aagaagacgaggaggaagaa 136465
>emb|AJ334792.1|HSA334792 Homo sapiens genomic sequence surrounding NotI site, clone NL1-DK19R Length = 862 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 aagaaagcaaagccaagccc 81 |||||||||||||||||||| Sbjct: 448 aagaaagcaaagccaagccc 429
>gb|AC149277.11| Mus musculus BAC clone RP24-213J23 from chromosome 7, complete sequence Length = 198579 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aagaagacgaggaggaagaa 105 |||||||||||||||||||| Sbjct: 100968 aagaagacgaggaggaagaa 100987
>gb|AC120557.12| Mus musculus chromosome 19, clone RP24-493E6, complete sequence Length = 169131 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 aatcaagaagacgaggaggaagaa 105 ||||||||||| |||||||||||| Sbjct: 147371 aatcaagaagaggaggaggaagaa 147348
>gb|AC124387.5| Mus musculus BAC clone RP24-426N3 from chromosome 13, complete sequence Length = 159689 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 aatcaagaagacgaggaggaagaa 105 ||||||||||| |||||||||||| Sbjct: 120752 aatcaagaagaggaggaggaagaa 120729
>gb|AC154617.3| Mus musculus BAC clone RP23-319O17 from chromosome 17, complete sequence Length = 197515 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 aagaagacgaggaggaagaa 105 |||||||||||||||||||| Sbjct: 188662 aagaagacgaggaggaagaa 188643
>gb|AC079681.38| Mus musculus strain C57BL/6J chromosome 10 clone rp23-310n21, complete sequence Length = 216807 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 87 agaagacgaggaggaagaatgggggagg 114 |||||| |||||||||||| |||||||| Sbjct: 41307 agaagaggaggaggaagaaggggggagg 41334
>emb|AL845487.5| Mouse DNA sequence from clone RP23-288M4 on chromosome 2, complete sequence Length = 120057 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 aagaagacgaggaggaagaa 105 |||||||||||||||||||| Sbjct: 66272 aagaagacgaggaggaagaa 66253
>emb|AL606976.25| Mouse DNA sequence from clone RP23-113P22 on chromosome 4, complete sequence Length = 169465 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aagaagacgaggaggaagaa 105 |||||||||||||||||||| Sbjct: 81206 aagaagacgaggaggaagaa 81225
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aagaagacgaggaggaagaa 105 |||||||||||||||||||| Sbjct: 2725170 aagaagacgaggaggaagaa 2725189
>emb|AL606914.9| Mouse DNA sequence from clone RP23-169H13 on chromosome 4, complete sequence Length = 197061 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gacgaggaggaagaatgggg 110 |||||||||||||||||||| Sbjct: 176582 gacgaggaggaagaatgggg 176563
>gb|DQ249362.1| Daphnia pulex microsatellite Dp887 sequence Length = 207 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 aagaagacgaggaggaagaa 105 |||||||||||||||||||| Sbjct: 132 aagaagacgaggaggaagaa 151 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 71,696,240 Number of extensions: 3809149 Number of successful extensions: 85249 Number of sequences better than 10.0: 54 Number of HSP's gapped: 85248 Number of HSP's successfully gapped: 57 Length of query: 641 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 619 Effective length of database: 18,508,616,841 Effective search space: 11456833824579 Effective search space used: 11456833824579 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
