ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf9f12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK070897:Os07g0640100 | 238 | 4e-63 | 2 | AK059275:Os07g0640100 | 238 | 4e-63 | 3 | AK108621:Os02g0641900 | 30 | 2.1 | 4 | Os04g0373000:Os04g0373000 | 29 | 2.7 | 5 | AK062705:Os03g0136600 | 29 | 2.7 | 6 | AK070515:Os02g0498300 | 29 | 3.5 | 7 | AK107476:Os03g0136500 | 28 | 6.0 | 8 | AK065844:Os12g0562100 | 28 | 6.0 | 9 | AK064831:Os12g0562100 | 28 | 6.0 |
|---|
>AK070897:Os07g0640100 | Length = 131 Score = 238 bits (606), Expect = 4e-63 Identities = 114/130 (87%), Positives = 126/130 (96%) Frame = +1 Query: 163 MAFTMRAVKVPPNSASMGEARHRVFDFFRQACRAIPSIMEIYNLDDVVTPAQLRASISQQ 342 MAFTMRAVKVPPNSAS+ EARHRVFDFFRQACRAIPSIMEIYNLDDVVTP+QLR++I+++ Sbjct: 1 MAFTMRAVKVPPNSASLEEARHRVFDFFRQACRAIPSIMEIYNLDDVVTPSQLRSTIAKE 60 Query: 343 IRKNQGVSDPKVIDMLLFNGMEELNNITEHAKQRHHIIGQYVVGHKGLVQDLEKDQGSSE 522 IRKNQGV++PKVIDMLLF GMEEL NITEHAKQRHH+IGQYVVG KGLVQD+EKDQGSS+ Sbjct: 61 IRKNQGVTNPKVIDMLLFKGMEELGNITEHAKQRHHVIGQYVVGQKGLVQDMEKDQGSSD 120 Query: 523 FLKKFYTSNY 552 FLKKFYTSNY Sbjct: 121 FLKKFYTSNY 130
>AK059275:Os07g0640100 | Length = 131 Score = 238 bits (606), Expect = 4e-63 Identities = 114/130 (87%), Positives = 126/130 (96%) Frame = +1 Query: 163 MAFTMRAVKVPPNSASMGEARHRVFDFFRQACRAIPSIMEIYNLDDVVTPAQLRASISQQ 342 MAFTMRAVKVPPNSAS+ EARHRVFDFFRQACRAIPSIMEIYNLDDVVTP+QLR++I+++ Sbjct: 1 MAFTMRAVKVPPNSASLEEARHRVFDFFRQACRAIPSIMEIYNLDDVVTPSQLRSTIAKE 60 Query: 343 IRKNQGVSDPKVIDMLLFNGMEELNNITEHAKQRHHIIGQYVVGHKGLVQDLEKDQGSSE 522 IRKNQGV++PKVIDMLLF GMEEL NITEHAKQRHH+IGQYVVG KGLVQD+EKDQGSS+ Sbjct: 61 IRKNQGVTNPKVIDMLLFKGMEELGNITEHAKQRHHVIGQYVVGQKGLVQDMEKDQGSSD 120 Query: 523 FLKKFYTSNY 552 FLKKFYTSNY Sbjct: 121 FLKKFYTSNY 130
>AK108621:Os02g0641900 | Length = 375 Score = 29.6 bits (65), Expect = 2.1 Identities = 35/92 (38%), Positives = 39/92 (42%), Gaps = 1/92 (1%) Frame = +3 Query: 180 RGEGSAELGVD-GGGAAPRVRLLQAGLPRHPLHHGDLQXXXXXXXXXXXXQHLPADQEEP 356 R EG+ E VD GGG APR RL PR L Q LPA +E Sbjct: 47 RQEGAQEGAVDAGGGQAPR-RLHPGQRPR------QLAPPPQARRAEPVRQELPAAVDE- 98 Query: 357 GRLRPQGH*YASLQRDGGAEQHYRARKAAPPH 452 L P GH +L R GAE H + AP H Sbjct: 99 --LPPAGHQARALHR-RGAEVH----RPAPRH 123
>Os04g0373000:Os04g0373000 | Length = 389 Score = 29.3 bits (64), Expect = 2.7 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 6/56 (10%) Frame = -2 Query: 522 LGAPLVLFQVLHQPLVAHHILPND------VVALLCVLGNVVQLLHPVEEKHINDL 373 L PL ++ ++AH IL V +LCV+G+V +LH +EK I+ + Sbjct: 196 LVTPLGALSIIFSAVLAHFILKERLHMFGIVGCILCVVGSVGIVLHAPKEKKIDSV 251
>AK062705:Os03g0136600 | Length = 159 Score = 29.3 bits (64), Expect = 2.7 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 6/74 (8%) Frame = +1 Query: 205 ASMGEARHRVFDFFRQACRAIPSIMEIYNL----DDVVTPAQ--LRASISQQIRKNQGVS 366 A+ EAR R+ R+A I+ + L DD P + LRA+ ++ + +G Sbjct: 58 AADAEARRRLTSSRREALGLYRDILRVTRLFEWPDDRGVPWREVLRANARREFEEARGER 117 Query: 367 DPKVIDMLLFNGME 408 DP+V+ LL G + Sbjct: 118 DPEVVARLLIGGRD 131
>AK070515:Os02g0498300 | Length = 268 Score = 28.9 bits (63), Expect = 3.5 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 6/56 (10%) Frame = -2 Query: 522 LGAPLVLFQVLHQPLVAHHILPND------VVALLCVLGNVVQLLHPVEEKHINDL 373 L PL ++ ++AH +L V +LCV+G+V +LH +E+ I+ + Sbjct: 22 LVTPLGALSIIFSAVLAHFVLKEKLHMFGVVGCILCVVGSVGIVLHAPKEREIDSI 77
>AK107476:Os03g0136500 | Length = 125 Score = 28.1 bits (61), Expect = 6.0 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Frame = +2 Query: 407 RS*TTLPSTQSSATTSLG-NMWWATRGWCRTWKRTKGAPSS*RNST 541 RS T ST AT + W +RG C + +RT+ APSS R++T Sbjct: 3 RSYTRRGSTSRPATRGRSPSRGWTSRG-CGSRRRTRSAPSSRRSTT 47
>AK065844:Os12g0562100 | Length = 591 Score = 28.1 bits (61), Expect = 6.0 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 11/62 (17%) Frame = -2 Query: 627 ASYSEYMSRALLQEGWKFLWPT-------RILVIAGVEFLQEL----GAPLVLFQVLHQP 481 A Y+ Y+ L+++ W F WP +L +A V F +L GAP+V + H P Sbjct: 140 ALYASYLFGNLVEQLWNFAWPAALAILHPSLLPVAIVGFFTKLSVFIGAPIVGKLMDHFP 199 Query: 480 LV 475 + Sbjct: 200 RI 201
>AK064831:Os12g0562100 | Length = 591 Score = 28.1 bits (61), Expect = 6.0 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 11/62 (17%) Frame = -2 Query: 627 ASYSEYMSRALLQEGWKFLWPT-------RILVIAGVEFLQEL----GAPLVLFQVLHQP 481 A Y+ Y+ L+++ W F WP +L +A V F +L GAP+V + H P Sbjct: 140 ALYASYLFGNLVEQLWNFAWPAALAILHPSLLPVAIVGFFTKLSVFIGAPIVGKLMDHFP 199 Query: 480 LV 475 + Sbjct: 200 RI 201 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 16,635,642 Number of extensions: 353091 Number of successful extensions: 1132 Number of sequences better than 10.0: 9 Number of HSP's gapped: 1132 Number of HSP's successfully gapped: 9 Length of query: 233 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 136 Effective length of database: 11,515,878 Effective search space: 1566159408 Effective search space used: 1566159408 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
