ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf9f12 |
|---|---|
| Clone Library Name | barley_pub |
>Q02366:NDUA6_BOVIN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 - Bos| taurus (Bovine) Length = 128 Score = 57.4 bits (137), Expect = 5e-08 Identities = 34/119 (28%), Positives = 61/119 (51%) Frame = +1 Query: 193 PPNSASMGEARHRVFDFFRQACRAIPSIMEIYNLDDVVTPAQLRASISQQIRKNQGVSDP 372 P S M EA+ RV + +R R +P+ + ++ LD ++ Q R + + +KN ++DP Sbjct: 19 PIFSRDMNEAKRRVRELYRAWYREVPNTVHLFQLD--ISVKQGRDKVREMFKKNAHITDP 76 Query: 373 KVIDMLLFNGMEELNNITEHAKQRHHIIGQYVVGHKGLVQDLEKDQGSSEFLKKFYTSN 549 +V+D+L+ G EL + KQR H++ + + E + +FL KFY + Sbjct: 77 RVVDLLVIKGKMELEETIKVWKQRTHVMRFF--------HETEAPR-PKDFLSKFYVGH 126
>Q9CQZ5:NDUA6_MOUSE NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 - Mus| musculus (Mouse) Length = 131 Score = 55.1 bits (131), Expect = 3e-07 Identities = 35/116 (30%), Positives = 58/116 (50%) Frame = +1 Query: 193 PPNSASMGEARHRVFDFFRQACRAIPSIMEIYNLDDVVTPAQLRASISQQIRKNQGVSDP 372 P S + EA+ RV + +R R +P+ + + LD +T Q R + + KN V+DP Sbjct: 22 PIFSRDLNEAKRRVRELYRAWYREVPNTVHLMQLD--ITVKQGRDKVREMFMKNAHVTDP 79 Query: 373 KVIDMLLFNGMEELNNITEHAKQRHHIIGQYVVGHKGLVQDLEKDQGSSEFLKKFY 540 +V+D+L+ G EL + KQR H++ + H+ + +FL KFY Sbjct: 80 RVVDLLVIKGKMELQETIKVWKQRTHVMRFF---HE------TETPRPKDFLSKFY 126
>Q0MQA5:NDUA6_PANTR NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 - Pan| troglodytes (Chimpanzee) Length = 128 Score = 53.9 bits (128), Expect = 6e-07 Identities = 35/119 (29%), Positives = 58/119 (48%) Frame = +1 Query: 193 PPNSASMGEARHRVFDFFRQACRAIPSIMEIYNLDDVVTPAQLRASISQQIRKNQGVSDP 372 P S M EA+ RV + +R R +P+ + + LD +T R + + KN V+DP Sbjct: 19 PIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLD--ITVKMGRDKVREMFMKNAHVTDP 76 Query: 373 KVIDMLLFNGMEELNNITEHAKQRHHIIGQYVVGHKGLVQDLEKDQGSSEFLKKFYTSN 549 +V+D+L+ G EL + KQR H++ + + E + +FL KFY + Sbjct: 77 RVVDLLVIKGKIELEETIKVWKQRTHVMRFF--------HETEAPR-PKDFLSKFYVGH 126
>P56556:NDUA6_HUMAN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 - Homo| sapiens (Human) Length = 128 Score = 53.9 bits (128), Expect = 6e-07 Identities = 35/119 (29%), Positives = 58/119 (48%) Frame = +1 Query: 193 PPNSASMGEARHRVFDFFRQACRAIPSIMEIYNLDDVVTPAQLRASISQQIRKNQGVSDP 372 P S M EA+ RV + +R R +P+ + + LD +T R + + KN V+DP Sbjct: 19 PIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLD--ITVKMGRDKVREMFMKNAHVTDP 76 Query: 373 KVIDMLLFNGMEELNNITEHAKQRHHIIGQYVVGHKGLVQDLEKDQGSSEFLKKFYTSN 549 +V+D+L+ G EL + KQR H++ + + E + +FL KFY + Sbjct: 77 RVVDLLVIKGKIELEETIKVWKQRTHVMRFF--------HETEAPR-PKDFLSKFYVGH 126
>Q0MQA4:NDUA6_GORGO NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 -| Gorilla gorilla gorilla (Lowland gorilla) Length = 128 Score = 53.9 bits (128), Expect = 6e-07 Identities = 35/119 (29%), Positives = 58/119 (48%) Frame = +1 Query: 193 PPNSASMGEARHRVFDFFRQACRAIPSIMEIYNLDDVVTPAQLRASISQQIRKNQGVSDP 372 P S M EA+ RV + +R R +P+ + + LD +T R + + KN V+DP Sbjct: 19 PIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLD--ITVKMGRDKVREMFMKNAHVTDP 76 Query: 373 KVIDMLLFNGMEELNNITEHAKQRHHIIGQYVVGHKGLVQDLEKDQGSSEFLKKFYTSN 549 +V+D+L+ G EL + KQR H++ + + E + +FL KFY + Sbjct: 77 RVVDLLVIKGKIELEETIKVWKQRTHVMRFF--------HETEAPR-PKDFLSKFYVGH 126
>Q0MQA3:NDUA6_PONPY NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 -| Pongo pygmaeus (Orangutan) Length = 128 Score = 52.0 bits (123), Expect = 2e-06 Identities = 34/119 (28%), Positives = 57/119 (47%) Frame = +1 Query: 193 PPNSASMGEARHRVFDFFRQACRAIPSIMEIYNLDDVVTPAQLRASISQQIRKNQGVSDP 372 P S M EA+ RV + +R R +P+ + + LD +T R + + KN V+DP Sbjct: 19 PIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLD--ITVKMGRDKVREMFMKNAHVTDP 76 Query: 373 KVIDMLLFNGMEELNNITEHAKQRHHIIGQYVVGHKGLVQDLEKDQGSSEFLKKFYTSN 549 +V+D+L+ G EL KQ+ H++ + + E + +FL KFY + Sbjct: 77 RVVDLLVIKGKIELEETINVWKQQTHVMRFF--------HETEAPR-PKDFLSKFYVGH 126
>P42114:NDUA6_NEUCR NADH-ubiquinone oxidoreductase 14.8 kDa subunit - Neurospora crassa| Length = 124 Score = 42.4 bits (98), Expect = 0.002 Identities = 23/88 (26%), Positives = 46/88 (52%) Frame = +1 Query: 202 SASMGEARHRVFDFFRQACRAIPSIMEIYNLDDVVTPAQLRASISQQIRKNQGVSDPKVI 381 SA+ +A+ RVF +R+ R+ P + +Y+L + + +R I Q+ +N+ V+ V+ Sbjct: 15 SANWSDAKRRVFALYRRWLRSTPEMQSMYSLP--LPISVIRTRIRQEFERNRFVNKLPVV 72 Query: 382 DMLLFNGMEELNNITEHAKQRHHIIGQY 465 D+LL G + +Q H++ + Sbjct: 73 DVLLTKGHADYQETMNFWRQTTHMMSYF 100
>P33654:YBL2_STRCI Hypothetical 14.2 kDa protein in blaB 3'region - Streptomyces| cacaoi Length = 132 Score = 32.3 bits (72), Expect = 1.8 Identities = 18/41 (43%), Positives = 25/41 (60%) Frame = +2 Query: 416 TTLPSTQSSATTSLGNMWWATRGWCRTWKRTKGAPSS*RNS 538 T++P+T S A S + W A R W TW RT +P+S R+S Sbjct: 42 TSVPATSSIANGSSASSW-AIRAWKTTWSRT--SPNSSRSS 79
>P08488:GLT3_WHEAT Glutenin, high molecular weight subunit 12 precursor - Triticum| aestivum (Wheat) Length = 660 Score = 31.6 bits (70), Expect = 3.0 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = +3 Query: 330 HLPADQEEPGRLRPQGH*YASLQRDG-GAEQHYRARKAAP 446 H PA Q++PG+ QGH AS Q+ G G + HY A + P Sbjct: 306 HYPASQQQPGQ-GQQGHYPASQQQPGQGQQGHYPASQQEP 344
>P10387:GLT0_WHEAT Glutenin, high molecular weight subunit DY10 precursor - Triticum| aestivum (Wheat) Length = 648 Score = 31.6 bits (70), Expect = 3.0 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = +3 Query: 330 HLPADQEEPGRLRPQGH*YASLQRDG-GAEQHYRARKAAP 446 H PA Q++PG+ QGH AS Q+ G G + HY A + P Sbjct: 294 HYPASQQQPGQ-GQQGHYPASQQQPGQGQQGHYPASQQEP 332
>Q5DJU3:ORC3_SPECI Origin recognition complex subunit 3 - Spermophilus citellus| (European suslik) (Citellus citellus) Length = 713 Score = 30.0 bits (66), Expect = 8.8 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 4/49 (8%) Frame = -2 Query: 564 TRIL---VIAGVEFLQELGAPLVL-FQVLHQPLVAHHILPNDVVALLCV 430 T+IL +I + L E PL+L F + P++ H +LP+ V +LLC+ Sbjct: 227 TKILQDFIIISSQHLHEF--PLILIFGIATSPIIIHRLLPHAVSSLLCI 273
>Q9JK30:ORC3_MOUSE Origin recognition complex subunit 3 - Mus musculus (Mouse)| Length = 715 Score = 30.0 bits (66), Expect = 8.8 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Frame = -2 Query: 513 PLVL-FQVLHQPLVAHHILPNDVVALLCV 430 PL+L F + P++ H +LP+ V +LLCV Sbjct: 251 PLILIFGIATSPVIIHRLLPHSVSSLLCV 279 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 99,587,751 Number of extensions: 2059329 Number of successful extensions: 6196 Number of sequences better than 10.0: 12 Number of HSP's gapped: 6192 Number of HSP's successfully gapped: 12 Length of query: 233 Length of database: 100,686,439 Length adjustment: 110 Effective length of query: 123 Effective length of database: 70,513,989 Effective search space: 8673220647 Effective search space used: 8673220647 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
