ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf9o01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1O24160:TGA21_TOBAC TGACG-sequence-specific DNA-binding protein T... 40 0.012
2P23923:HBP1B_WHEAT Transcription factor HBP-1b(c38) - Triticum a... 39 0.034
3P14232:TGA1A_TOBAC TGACG-sequence-specific DNA-binding protein T... 37 0.13
4Q28165:PABP2_BOVIN Polyadenylate-binding protein 2 - Bos taurus ... 37 0.13
5Q86U42:PABP2_HUMAN Polyadenylate-binding protein 2 - Homo sapien... 37 0.17
6O22194:AGP17_ARATH Lysine-rich arabinogalactan protein 17 precur... 37 0.17
7P43273:TGA2_ARATH Transcription factor TGA2 - Arabidopsis thalia... 35 0.50
8Q8CCS6:PABP2_MOUSE Polyadenylate-binding protein 2 - Mus musculu... 34 0.85
9Q5SSH7:ZZEF1_MOUSE Zinc finger ZZ-type and EF-hand domain-contai... 33 1.9
10Q9A4S7:GLNE_CAUCR Glutamate-ammonia-ligase adenylyltransferase -... 33 1.9
11O83558:ISPH_TREPA 4-hydroxy-3-methylbut-2-enyl diphosphate reduc... 33 2.5
12Q9Y3S1:WNK2_HUMAN Serine/threonine-protein kinase WNK2 - Homo sa... 32 3.2
13Q39162:TGA4_ARATH Transcription factor TGA4 - Arabidopsis thalia... 32 4.2
14P18583:SON_HUMAN SON protein - Homo sapiens (Human) 32 4.2
15Q99NA9:PCGF6_MOUSE Polycomb group RING finger protein 6 - Mus mu... 32 4.2
16P02845:VIT2_CHICK Vitellogenin-2 precursor - Gallus gallus (Chic... 32 5.5
17P33191:TUB8_SOLTU Induced stolen tip protein TUB8 - Solanum tube... 32 5.5
18Q3J3I2:ANMK_RHOS4 Anhydro-N-acetylmuramic acid kinase - Rhodobac... 32 5.5
19Q5REX1:SN1L2_PONPY Serine/threonine-protein kinase SNF1-like kin... 31 7.2
20P80146:SEPR_THESR Extracellular serine proteinase precursor - Th... 31 7.2
21Q67P86:IF2_SYMTH Translation initiation factor IF-2 - Symbiobact... 31 7.2
22Q8BYH8:CHD9_MOUSE Chromodomain-helicase-DNA-binding protein 9 - ... 31 7.2
23Q6M9M7:Y1998_PARUW Uncharacterized RNA methyltransferase pc1998 ... 31 9.4
24Q5YTJ4:SYD_NOCFA Aspartyl-tRNA synthetase - Nocardia farcinica 31 9.4
25P33329:PPZ2_YEAST Serine/threonine-protein phosphatase PP-Z2 - S... 31 9.4
26P20397:NUCL_XENLA Nucleolin - Xenopus laevis (African clawed frog) 31 9.4
27O75061:AUXI_HUMAN Putative tyrosine-protein phosphatase auxilin ... 31 9.4

>O24160:TGA21_TOBAC TGACG-sequence-specific DNA-binding protein TGA-2.1 - Nicotiana|
           tabacum (Common tobacco)
          Length = 456
 Score = 40.4 bits (93), Expect = 0.012
 Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
 Frame = +3

Query: 144 ADDPAQLAKLVAGYVSHFADYCAAR---AELDPVWTLAAPWASPVERGAAHWLAGWRPTT 314
           A DP +L  +V    +HF +    +   A+ D    L+  W +P ER    W+ G+RP+ 
Sbjct: 262 ASDP-ELRSIVNNVTAHFDEVFRVKGNAAKADVFHVLSGMWKTPAER-CFMWIGGFRPSE 319

Query: 315 LVHLLYTESGRRFEAQLPDLLLGVRSGNLGDLSPAQLAQIDELQRRTVAQEDELSREMAR 494
           L+ LL  +                    L  L+  QLA I  LQ+ +   ED LS+ M  
Sbjct: 320 LLKLLVNQ--------------------LEPLTEQQLAGIYNLQQSSHQAEDALSQGMEA 359

Query: 495 VQ 500
           +Q
Sbjct: 360 LQ 361



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>P23923:HBP1B_WHEAT Transcription factor HBP-1b(c38) - Triticum aestivum (Wheat)|
          Length = 332

 Score = 38.9 bits (89), Expect = 0.034
 Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
 Frame = +3

Query: 159 QLAKLVAGYVSHFADYCAAR---AELDPVWTLAAPWASPVERGAAHWLAGWRPTTLVHLL 329
           +L  +V   +SH+ +    +   A+ D    L+  W +P ER    WL G+RP+ L+ LL
Sbjct: 144 ELRSVVEKIMSHYDEIFKQKGNAAKADVFHVLSGMWKTPAER-CFLWLGGFRPSELLKLL 202

Query: 330 YTESGRRFEAQLPDLLLGVRSGNLGDLSPAQLAQIDELQRRTVAQEDELSREMARVQ 500
            T+                    L  L+  QL+ I  LQ+ +   ED LS+ M  +Q
Sbjct: 203 STQ--------------------LEPLTEQQLSGICNLQQSSQQAEDALSQGMEALQ 239



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>P14232:TGA1A_TOBAC TGACG-sequence-specific DNA-binding protein TGA-1A - Nicotiana|
           tabacum (Common tobacco)
          Length = 359

 Score = 37.0 bits (84), Expect = 0.13
 Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
 Frame = +3

Query: 156 AQLAKLVAGYVSHFADYC---AARAELDPVWTLAAPWASPVERGAAHWLAGWRPTTLVHL 326
           A+L  +V GY++H+ D     A  A+ D ++ ++  W +  ER    W+ G+RP+ L+ +
Sbjct: 175 AELRIIVDGYLNHYFDLFRMKATAAKADVLYIMSGMWKTSAERFFM-WIGGFRPSELLKV 233

Query: 327 LYTESGRRFEAQLPDLLLGVRSGNLGDLSPAQLAQIDELQRRTVAQEDELSREMARV 497
           L            P L L         L+  QL ++  L +     ED LS+ M ++
Sbjct: 234 L-----------TPHLEL---------LTEQQLREVCNLTQSCQQAEDALSQGMVKL 270



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>Q28165:PABP2_BOVIN Polyadenylate-binding protein 2 - Bos taurus (Bovine)|
          Length = 306

 Score = 37.0 bits (84), Expect = 0.13
 Identities = 21/71 (29%), Positives = 32/71 (45%)
 Frame = -2

Query: 839 ESLPVPVKPAATPGKKTGLGLPAPVADDDRAGCTSGAAGADAVVLEPELTEPDLHVRRGD 660
           E  P P  P   PG   G G P    +++ +G   G  G D  + +PEL      VR  +
Sbjct: 72  EEPPRPRAPPGAPGPGPGSGAPGNQEEEEESGLVEGDPG-DGAIEDPELEAIKARVREME 130

Query: 659 EQLGGLRRLED 627
           E+   L+ L++
Sbjct: 131 EEAEKLKELQN 141



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>Q86U42:PABP2_HUMAN Polyadenylate-binding protein 2 - Homo sapiens (Human)|
          Length = 306

 Score = 36.6 bits (83), Expect = 0.17
 Identities = 21/71 (29%), Positives = 31/71 (43%)
 Frame = -2

Query: 839 ESLPVPVKPAATPGKKTGLGLPAPVADDDRAGCTSGAAGADAVVLEPELTEPDLHVRRGD 660
           E  P P  P   PG   G G P    +++  G   G  G D  + +PEL      VR  +
Sbjct: 72  EEPPRPRAPPGAPGPGPGSGAPGSQEEEEEPGLVEGDPG-DGAIEDPELEAIKARVREME 130

Query: 659 EQLGGLRRLED 627
           E+   L+ L++
Sbjct: 131 EEAEKLKELQN 141



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>O22194:AGP17_ARATH Lysine-rich arabinogalactan protein 17 precursor - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 185

 Score = 36.6 bits (83), Expect = 0.17
 Identities = 35/142 (24%), Positives = 56/142 (39%), Gaps = 4/142 (2%)
 Frame = -2

Query: 944 STP*HGPATTKHSPRDSRRSTDLA----DNRRGNKITRVESLPVPVKPAATPGKKTGLGL 777
           + P H P+T+ H P+ +  +   A    ++      T VE+ PV   P+ TP     +  
Sbjct: 26  TAPIHSPSTSPHKPKPTSPAISPAAPTPESTEAPAKTPVEA-PVEAPPSPTPASTPQISP 84

Query: 776 PAPVADDDRAGCTSGAAGADAVVLEPELTEPDLHVRRGDEQLGGLRRLEDLHGALHGAQP 597
           PAP  + D       A  AD  V  P LT+     ++           E L       + 
Sbjct: 85  PAPSPEADTPSAPEIAPSAD--VPAPALTKHKKKTKKHKTAPAPGPASELLSPPAPPGEA 142

Query: 596 QRVGPGDHCADAADEPAHVQQL 531
              GP D  + AAD+ +  Q++
Sbjct: 143 PGPGPSDAFSPAADDQSGAQRI 164



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>P43273:TGA2_ARATH Transcription factor TGA2 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 330

 Score = 35.0 bits (79), Expect = 0.50
 Identities = 38/161 (23%), Positives = 63/161 (39%), Gaps = 3/161 (1%)
 Frame = +3

Query: 27  QKRETTGVRAMELEAARRRFQXXXXXXXXXXXXXXTARWADDPAQLAKLVAGYVSHFADY 206
           Q   T G  A+  +A   R+                A   D  ++L  +V G ++H+ + 
Sbjct: 102 QAHSTGGNGALAFDAEHSRWLEEKNKQMNELRSALNAHAGD--SELRIIVDGVMAHYEEL 159

Query: 207 CAAR---AELDPVWTLAAPWASPVERGAAHWLAGWRPTTLVHLLYTESGRRFEAQLPDLL 377
              +   A+ D    L+  W +P ER    WL G+R + L+ LL                
Sbjct: 160 FRIKSNAAKNDVFHLLSGMWKTPAER-CFLWLGGFRSSELLKLL---------------- 202

Query: 378 LGVRSGNLGDLSPAQLAQIDELQRRTVAQEDELSREMARVQ 500
               +  L  ++  QL  I+ LQ+ +   ED LS+ M  +Q
Sbjct: 203 ----ANQLEPMTERQLMGINNLQQTSQQAEDALSQGMESLQ 239



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>Q8CCS6:PABP2_MOUSE Polyadenylate-binding protein 2 - Mus musculus (Mouse)|
          Length = 302

 Score = 34.3 bits (77), Expect = 0.85
 Identities = 20/71 (28%), Positives = 30/71 (42%)
 Frame = -2

Query: 839 ESLPVPVKPAATPGKKTGLGLPAPVADDDRAGCTSGAAGADAVVLEPELTEPDLHVRRGD 660
           E  P P  P   PG   G G P    +++  G      G D  + +PEL      VR  +
Sbjct: 68  EEPPRPRAPPGAPGPGPGSGAPGSQEEEEEPGLVEADPG-DGAIEDPELEAIKARVREME 126

Query: 659 EQLGGLRRLED 627
           E+   L+ L++
Sbjct: 127 EEAEKLKELQN 137



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>Q5SSH7:ZZEF1_MOUSE Zinc finger ZZ-type and EF-hand domain-containing protein 1 - Mus|
           musculus (Mouse)
          Length = 2924

 Score = 33.1 bits (74), Expect = 1.9
 Identities = 28/91 (30%), Positives = 39/91 (42%)
 Frame = -2

Query: 587 GPGDHCADAADEPAHVQQLPARAHQAVALLHPRHLARQLVLLRHGAALQLVDLRQLGGAE 408
           GPG   A      A ++  PAR  +A A L P      LV   HGA L+ ++ R   G E
Sbjct: 36  GPGPAAAVLPSAAALLE--PARLREAAAALRPAPPCESLVSRHHGALLRWLEERLGRGEE 93

Query: 407 VAEVARPHAQQEVRELRLEAAAGLGVEQVDQ 315
              +      ++ REL     AG   EQ ++
Sbjct: 94  SVTL------EQFRELLEARGAGCSGEQFEE 118



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>Q9A4S7:GLNE_CAUCR Glutamate-ammonia-ligase adenylyltransferase - Caulobacter|
           crescentus (Caulobacter vibrioides)
          Length = 986

 Score = 33.1 bits (74), Expect = 1.9
 Identities = 38/150 (25%), Positives = 60/150 (40%), Gaps = 30/150 (20%)
 Frame = -2

Query: 905 PRDSRRSTDLADNRRGNKITRVESLPVPVKP--AATP-----GKKTGLGLPAPVADDDRA 747
           P+ + R+ +    R G  + +V++    + P  AA+P      ++ G  LP  +  D   
Sbjct: 45  PKAAERAYEAIAKRAGEAMGQVDAAWGSLAPVFAASPYLAGLARRDGKRLPRILGGDPGE 104

Query: 746 GCTSGAAGADAVVLEPELT---------EPDLHVRRGDEQLGGLRRLEDLHGA------- 615
              +  A A+AV  EP+           + DLH+      LGG+  L+ + GA       
Sbjct: 105 TLAAILAAAEAVAAEPDFETARRVLRELKADLHLLTAISDLGGVWDLDQVTGALTRFADA 164

Query: 614 -LHGAQPQRV------GPGDHCADAADEPA 546
            LH A  Q V      G   H  D +  PA
Sbjct: 165 VLHAALAQAVRQEVSRGALTHVGDGSAGPA 194



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>O83558:ISPH_TREPA 4-hydroxy-3-methylbut-2-enyl diphosphate reductase - Treponema|
           pallidum
          Length = 376

 Score = 32.7 bits (73), Expect = 2.5
 Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
 Frame = -2

Query: 581 GDHCADAA--DEPAHVQQLPARAHQAVALLHPRHLARQLVLLRHGAALQLVDLRQLGGAE 408
           G  C D A      H    P  A  AV        AR +V+  HG A ++ +  +  GA+
Sbjct: 60  GIECLDPAHLSFALHAPAAPGAAPHAVE----EKTARTVVIRAHGVAPEVYEALERSGAQ 115

Query: 407 VAEVARPHAQQEVRELRLEAAAGLGV 330
           V +   P  ++  R  +  AA GL V
Sbjct: 116 VVDATCPRVKESQRRAQGFAAQGLHV 141



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>Q9Y3S1:WNK2_HUMAN Serine/threonine-protein kinase WNK2 - Homo sapiens (Human)|
          Length = 2297

 Score = 32.3 bits (72), Expect = 3.2
 Identities = 22/49 (44%), Positives = 24/49 (48%)
 Frame = -2

Query: 833  LPVPVKPAATPGKKTGLGLPAPVADDDRAGCTSGAAGADAVVLEPELTE 687
            LP    PAATPG +  LG PAP A D  A   +      A VL P L E
Sbjct: 1009 LPEQAAPAATPGSQILLGHPAPYAVDVAAQVPT-VPVPPAAVLSPPLPE 1056



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>Q39162:TGA4_ARATH Transcription factor TGA4 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 364

 Score = 32.0 bits (71), Expect = 4.2
 Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 3/117 (2%)
 Frame = +3

Query: 159 QLAKLVAGYVSHFADYC---AARAELDPVWTLAAPWASPVERGAAHWLAGWRPTTLVHLL 329
           +L  LV   + H+       +A A++D  + ++  W +  ER    W+ G+RP+ L+ +L
Sbjct: 182 ELRSLVENAMKHYFQLFRMKSAAAKIDVFYVMSGMWKTSAERFFL-WIGGFRPSELLKVL 240

Query: 330 YTESGRRFEAQLPDLLLGVRSGNLGDLSPAQLAQIDELQRRTVAQEDELSREMARVQ 500
                      LP         +   L+  QL  +  L++     ED LS+ M ++Q
Sbjct: 241 -----------LP---------HFDPLTDQQLLDVCNLRQSCQQAEDALSQGMEKLQ 277



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>P18583:SON_HUMAN SON protein - Homo sapiens (Human)|
          Length = 2426

 Score = 32.0 bits (71), Expect = 4.2
 Identities = 26/74 (35%), Positives = 35/74 (47%)
 Frame = -3

Query: 496  TRAISRDSSSSCATVRRCSSSICASWAGLRSPRLPDRTPSRRSGSCASKRRPDSV*SRWT 317
            +R  SR S S   + RR S S+    +   SP    RTPSRRS + + + R  S  SR  
Sbjct: 1922 SRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTP 1981

Query: 316  SVVGRQPASQWAAP 275
            S   R P+ +   P
Sbjct: 1982 SRRSRTPSRRSRTP 1995



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>Q99NA9:PCGF6_MOUSE Polycomb group RING finger protein 6 - Mus musculus (Mouse)|
          Length = 353

 Score = 32.0 bits (71), Expect = 4.2
 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
 Frame = -2

Query: 884 TDLADNRRGNKITRVESLPVPVKPAATPGKKTGLGLPAPVADDDRAGCTSGAAGADAVVL 705
           TD  +N+R ++  R  ++P P  P   P       +PAP A ++       A  A     
Sbjct: 6   TDATENKRASEAKRASAMPPP--PPPPPPISPPALIPAPAAGEEGPASLGQAGAAGCSRS 63

Query: 704 EPELTEPDLHVRRGDEQLGGLR-RLED 627
            P   EP       +  LG LR R ED
Sbjct: 64  RPPALEP-------ERSLGRLRGRFED 83



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>P02845:VIT2_CHICK Vitellogenin-2 precursor - Gallus gallus (Chicken)|
          Length = 1850

 Score = 31.6 bits (70), Expect = 5.5
 Identities = 24/85 (28%), Positives = 42/85 (49%)
 Frame = -3

Query: 484  SRDSSSSCATVRRCSSSICASWAGLRSPRLPDRTPSRRSGSCASKRRPDSV*SRWTSVVG 305
            S  SSSS ++  R SSS  +S +  +S     ++ S  S S +S +   S  S  +S   
Sbjct: 1193 SSSSSSSSSSSSRSSSSSSSSSSNSKSSSSSSKSSSSSSRSRSSSKSSSSSSSSSSSSSS 1252

Query: 304  RQPASQWAAPRSTGLAHGAASVHTG 230
            +  +S+ ++  S   +H + S H+G
Sbjct: 1253 KSSSSRSSSSSSKSSSHHSHSHHSG 1277



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>P33191:TUB8_SOLTU Induced stolen tip protein TUB8 - Solanum tuberosum (Potato)|
          Length = 211

 Score = 31.6 bits (70), Expect = 5.5
 Identities = 44/182 (24%), Positives = 69/182 (37%), Gaps = 6/182 (3%)
 Frame = -2

Query: 1025 YFFFFFSP----KKHAASVSALHFITCLSVNSTP*HGPATTKHSPRDSRRSTDLADNRRG 858
            + FF F P    +  +A V+A+   T   V +TP   P  TK           + +    
Sbjct: 15   FLFFNFIPMASVEVESAPVAAVETTTPAEVEATP--APEVTK-----VEEPAPVVE---- 63

Query: 857  NKITRVESLPVPVKPAATPGKKTGLGLPA--PVADDDRAGCTSGAAGADAVVLEPELTEP 684
             K   VES P PV+  A P  +    L A  P A +  A   +      A V EP   E 
Sbjct: 64   -KEVEVESAPAPVEEEAAPVAEEAAALVAEEPAAAEPTAAVAAAVEPVAAPVEEPAAAEE 122

Query: 683  DLHVRRGDEQLGGLRRLEDLHGALHGAQPQRVGPGDHCADAADEPAHVQQLPARAHQAVA 504
                    E+      +E+   A   A+P+     +  A+ A+E + V + P +  + + 
Sbjct: 123  P----AAAEEPVAAAPVEE--AAAPKAEPEEAPVSEPEAEKAEEASPVSEEPEKVEEIIQ 176

Query: 503  LL 498
             L
Sbjct: 177  WL 178



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>Q3J3I2:ANMK_RHOS4 Anhydro-N-acetylmuramic acid kinase - Rhodobacter sphaeroides|
           (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
          Length = 371

 Score = 31.6 bits (70), Expect = 5.5
 Identities = 24/54 (44%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = +3

Query: 195 FADYCAARAEL---DPVWTLAAPWASPVERGAAHWLAGWRPTTLVHLLYTESGR 347
           FAD   A A+L   D   TL A  A+ V RGAAH+     PT +  LL T  GR
Sbjct: 248 FADLLPAVADLSDADAAATLTAAAAAAVARGAAHF-----PTPVRQLLVTGGGR 296



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>Q5REX1:SN1L2_PONPY Serine/threonine-protein kinase SNF1-like kinase 2 - Pongo pygmaeus|
           (Orangutan)
          Length = 925

 Score = 31.2 bits (69), Expect = 7.2
 Identities = 19/67 (28%), Positives = 32/67 (47%)
 Frame = -3

Query: 883 PIWRTIVAATRLQEWKASLSQSNQQLHLEKKPGWACRRRLPMMTELAARQEPPAPTPSYL 704
           P+   +  ++   ++   LSQ  Q++ L+  P  +  R  P+ T+L  +Q PP P P   
Sbjct: 773 PLSPVLEPSSEQMQYSPFLSQY-QEMQLQPLPSTSSPRAAPLPTQLQQQQPPPPPPP--- 828

Query: 703 SPNSRNP 683
            P  R P
Sbjct: 829 -PPPRQP 834



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>P80146:SEPR_THESR Extracellular serine proteinase precursor - Thermus sp. (strain|
           Rt41A)
          Length = 410

 Score = 31.2 bits (69), Expect = 7.2
 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
 Frame = -2

Query: 584 PGDHCADAADEPAHVQQ--LPARAHQAVALLHPRHLARQLVLLRHGAALQLVDLRQLGGA 411
           P      AA EP  +Q   L A+A + + L   R        LR G A+++ D       
Sbjct: 57  PALEALKAALEPGLMQPQGLQAQALRTLGLEGARVDKVYTAALR-GVAVEVPDQELARLR 115

Query: 410 EVAEVARPHAQQEVRELRLEAAAGLGVEQVDQRRRPPAGQ 291
           +   VA   A QEVR   +++ A  G++++DQR  P  G+
Sbjct: 116 QDPRVAYIEADQEVRAFAVQSPATWGLDRIDQRTLPLDGR 155



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>Q67P86:IF2_SYMTH Translation initiation factor IF-2 - Symbiobacterium thermophilum|
          Length = 1044

 Score = 31.2 bits (69), Expect = 7.2
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -2

Query: 827 VPVKPAATPGKKTGLGLPAPVADDDRAGCTSGAAG 723
           VPVKPAA  G K+GLGLP    +    G   G +G
Sbjct: 312 VPVKPAA--GGKSGLGLPTRPGEKAADGARGGGSG 344



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>Q8BYH8:CHD9_MOUSE Chromodomain-helicase-DNA-binding protein 9 - Mus musculus (Mouse)|
          Length = 2885

 Score = 31.2 bits (69), Expect = 7.2
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -1

Query: 903  ARQPSIHRSGGQSSRQQDYKSGKPPCPSQTSS 808
            +++P +H+ G QSS   D  S +  C S++SS
Sbjct: 2117 SKKPRVHKRGSQSSSDSDSDSARSSCSSRSSS 2148



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>Q6M9M7:Y1998_PARUW Uncharacterized RNA methyltransferase pc1998 - Protochlamydia|
           amoebophila (strain UWE25)
          Length = 383

 Score = 30.8 bits (68), Expect = 9.4
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -3

Query: 892 VDPPIWRTIVAATRLQEWKASLSQSNQQLHLEKKPGWACRRRL 764
           V+PPIWR ++     + +K +L   N  LH     GW CR +L
Sbjct: 27  VEPPIWREVI-----ENFKETL---NPILHQGTLTGWRCRAKL 61



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>Q5YTJ4:SYD_NOCFA Aspartyl-tRNA synthetase - Nocardia farcinica|
          Length = 597

 Score = 30.8 bits (68), Expect = 9.4
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 306 PTTLVHLLYTESGRRFEAQLPDLLLGV 386
           PT + H+ Y E+ RRF +  PDL  GV
Sbjct: 263 PTPIPHMTYAEAMRRFGSDKPDLRFGV 289



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>P33329:PPZ2_YEAST Serine/threonine-protein phosphatase PP-Z2 - Saccharomyces cerevisiae|
            (Baker's yeast)
          Length = 710

 Score = 30.8 bits (68), Expect = 9.4
 Identities = 26/95 (27%), Positives = 41/95 (43%)
 Frame = -2

Query: 1019 FFFFSPKKHAASVSALHFITCLSVNSTP*HGPATTKHSPRDSRRSTDLADNRRGNKITRV 840
            +F      HA+S  +    T  +  STP H PA  K S RD+  S D  + R  + I  +
Sbjct: 245  YFSNRSNSHASSRKSSFGSTGNTAYSTPLHSPALRKMSSRDNDDSGDNVNGRGTSPIPNL 304

Query: 839  ESLPVPVKPAATPGKKTGLGLPAPVADDDRAGCTS 735
             ++  P   A++  K+  L     +A  D +   S
Sbjct: 305  -NIDKPSPSASSASKREYLSAYPTLAHRDSSSSLS 338



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>P20397:NUCL_XENLA Nucleolin - Xenopus laevis (African clawed frog)|
          Length = 651

 Score = 30.8 bits (68), Expect = 9.4
 Identities = 22/82 (26%), Positives = 30/82 (36%)
 Frame = -2

Query: 899 DSRRSTDLADNRRGNKITRVESLPVPVKPAATPGKKTGLGLPAPVADDDRAGCTSGAAGA 720
           DS    D+ ++   ++   V     P K  ATP K T    P   A   + G T    G 
Sbjct: 27  DSEEEEDMEEDDSSDEEVEVPVKKTPAKKTATPAKAT----PGKAATPGKKGATPAKNGK 82

Query: 719 DAVVLEPELTEPDLHVRRGDEQ 654
            A   E E  E D      D++
Sbjct: 83  QAKKQESEEEEDDSDEEAEDQK 104



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>O75061:AUXI_HUMAN Putative tyrosine-protein phosphatase auxilin - Homo sapiens|
           (Human)
          Length = 913

 Score = 30.8 bits (68), Expect = 9.4
 Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 11/127 (8%)
 Frame = -2

Query: 929 GPATTKHSPRDSRRSTDLADNRRGNKITRVESLPVPVKPAATPGKKTGLGLPAPVAD--- 759
           GPA+T+ +PR S  ST  +   R  +    +    P KP+      + L   +  +D   
Sbjct: 552 GPASTQSTPRRSATSTSASPTLRVGEGATFDPFGAPSKPSGQDLLGSFLNTSSASSDPFL 611

Query: 758 --DDRAGCTSGAAGADAVVLEPELTEP-DLHVRRGDEQLGGLRRLEDLHGALHG-----A 603
                   T  A+   AV ++P+++   D H + G   +G         G+ HG     +
Sbjct: 612 QPTRSPSPTVHASSTPAVNIQPDVSGGWDWHAKPGGFGMGSKSAATSPTGSSHGTPTHQS 671

Query: 602 QPQRVGP 582
           +PQ + P
Sbjct: 672 KPQTLDP 678


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 126,977,433
Number of extensions: 2597073
Number of successful extensions: 10812
Number of sequences better than 10.0: 27
Number of HSP's gapped: 10774
Number of HSP's successfully gapped: 27
Length of query: 342
Length of database: 100,686,439
Length adjustment: 114
Effective length of query: 228
Effective length of database: 69,416,809
Effective search space: 15827032452
Effective search space used: 15827032452
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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