ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf9o01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001062841.1| Oryza sativa (japonica cultivar-group) Os05g0560200 (Os05g0560200) mRNA, complete cds Length = 672 Score = 248 bits (125), Expect = 3e-62 Identities = 182/201 (90%) Strand = Plus / Plus Query: 312 acgctggtccacctgctctacaccgagtccggccgccgcttcgaggcgcagctcccggac 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 256 acgctggtccacctgctctacaccgagtccggccgccgcttcgaggcgcagctccccgac 315 Query: 372 ctcctgctgggcgtgcggtcgggcaacctcggcgacctcagccccgcccagctggcgcag 431 ||||| || ||||| | |||||||||||||||||||||||||| | |||||||||||| Sbjct: 316 ctcctcctcggcgtcagctcgggcaacctcggcgacctcagcccgtcgcagctggcgcag 375 Query: 432 atcgacgagctgcagcgccgcaccgtggcgcaggaggacgagctgtcgcgcgagatggcg 491 |||||||| || |||||||| ||||| || ||||||||| ||||||||| ||||||||| Sbjct: 376 atcgacgacctccagcgccggaccgtcgccgaggaggacgggctgtcgcgggagatggcg 435 Query: 492 cgggtgcaggagggcgacggc 512 | ||||||||||||| ||||| Sbjct: 436 ctggtgcaggagggccacggc 456 Score = 178 bits (90), Expect = 3e-41 Identities = 117/126 (92%) Strand = Plus / Plus Query: 585 gccgacgcgctgcggctgcgcaccatgaagcgcgccgtggagatcctcgagccggcgcag 644 ||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 526 gccgacgcgctccggctgcgcaccgtgaagcgcgcggtggagatcctcgagccggcgcag 585 Query: 645 gcctccgagctgctcgtcgccgcggcggacatggagatcgggttccgtgagttcgggctc 704 || ||||||||||||||||||| || |||||||||||||| ||||| |||||||||||| Sbjct: 586 gcggccgagctgctcgtcgccgccgccgacatggagatcggcttccgggagttcgggctc 645 Query: 705 aagtac 710 |||||| Sbjct: 646 aagtac 651 Score = 101 bits (51), Expect = 5e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 57 atggagctggaggcggcgaggcggcgcttccagctctggctccgcgggctgcggtcgctg 116 |||||| |||||||||||| |||||| ||||| ||||||||||||||||||||| |||| Sbjct: 1 atggaggtggaggcggcgacgcggcggttccacctctggctccgcgggctgcgggggctg 60 Query: 117 cgccgcgacctccgcacggcgcgctgggccgacgacccggcgcagct 163 || ||||| ||||| |||| || ||||| ||||||||||| ||||| Sbjct: 61 cggcgcgagctccgggcggcccggtgggcggacgacccggcccagct 107 Score = 50.1 bits (25), Expect = 0.016 Identities = 31/33 (93%) Strand = Plus / Plus Query: 210 gcggcgcgcgcggagctggacccggtgtggacg 242 |||||||| |||||| ||||||||||||||||| Sbjct: 154 gcggcgcgggcggagatggacccggtgtggacg 186
>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06, complete sequence Length = 139139 Score = 248 bits (125), Expect = 3e-62 Identities = 182/201 (90%) Strand = Plus / Minus Query: 312 acgctggtccacctgctctacaccgagtccggccgccgcttcgaggcgcagctcccggac 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 28389 acgctggtccacctgctctacaccgagtccggccgccgcttcgaggcgcagctccccgac 28330 Query: 372 ctcctgctgggcgtgcggtcgggcaacctcggcgacctcagccccgcccagctggcgcag 431 ||||| || ||||| | |||||||||||||||||||||||||| | |||||||||||| Sbjct: 28329 ctcctcctcggcgtcagctcgggcaacctcggcgacctcagcccgtcgcagctggcgcag 28270 Query: 432 atcgacgagctgcagcgccgcaccgtggcgcaggaggacgagctgtcgcgcgagatggcg 491 |||||||| || |||||||| ||||| || ||||||||| ||||||||| ||||||||| Sbjct: 28269 atcgacgacctccagcgccggaccgtcgccgaggaggacgggctgtcgcgggagatggcg 28210 Query: 492 cgggtgcaggagggcgacggc 512 | ||||||||||||| ||||| Sbjct: 28209 ctggtgcaggagggccacggc 28189 Score = 178 bits (90), Expect = 3e-41 Identities = 117/126 (92%) Strand = Plus / Minus Query: 585 gccgacgcgctgcggctgcgcaccatgaagcgcgccgtggagatcctcgagccggcgcag 644 ||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 28119 gccgacgcgctccggctgcgcaccgtgaagcgcgcggtggagatcctcgagccggcgcag 28060 Query: 645 gcctccgagctgctcgtcgccgcggcggacatggagatcgggttccgtgagttcgggctc 704 || ||||||||||||||||||| || |||||||||||||| ||||| |||||||||||| Sbjct: 28059 gcggccgagctgctcgtcgccgccgccgacatggagatcggcttccgggagttcgggctc 28000 Query: 705 aagtac 710 |||||| Sbjct: 27999 aagtac 27994 Score = 107 bits (54), Expect = 8e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 54 gcgatggagctggaggcggcgaggcggcgcttccagctctggctccgcgggctgcggtcg 113 ||||||||| |||||||||||| |||||| ||||| ||||||||||||||||||||| | Sbjct: 28647 gcgatggaggtggaggcggcgacgcggcggttccacctctggctccgcgggctgcggggg 28588 Query: 114 ctgcgccgcgacctccgcacggcgcgctgggccgacgacccggcgcagct 163 ||||| ||||| ||||| |||| || ||||| ||||||||||| ||||| Sbjct: 28587 ctgcggcgcgagctccgggcggcccggtgggcggacgacccggcccagct 28538 Score = 50.1 bits (25), Expect = 0.016 Identities = 31/33 (93%) Strand = Plus / Minus Query: 210 gcggcgcgcgcggagctggacccggtgtggacg 242 |||||||| |||||| ||||||||||||||||| Sbjct: 28491 gcggcgcgggcggagatggacccggtgtggacg 28459
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 248 bits (125), Expect = 3e-62 Identities = 182/201 (90%) Strand = Plus / Minus Query: 312 acgctggtccacctgctctacaccgagtccggccgccgcttcgaggcgcagctcccggac 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 27663831 acgctggtccacctgctctacaccgagtccggccgccgcttcgaggcgcagctccccgac 27663772 Query: 372 ctcctgctgggcgtgcggtcgggcaacctcggcgacctcagccccgcccagctggcgcag 431 ||||| || ||||| | |||||||||||||||||||||||||| | |||||||||||| Sbjct: 27663771 ctcctcctcggcgtcagctcgggcaacctcggcgacctcagcccgtcgcagctggcgcag 27663712 Query: 432 atcgacgagctgcagcgccgcaccgtggcgcaggaggacgagctgtcgcgcgagatggcg 491 |||||||| || |||||||| ||||| || ||||||||| ||||||||| ||||||||| Sbjct: 27663711 atcgacgacctccagcgccggaccgtcgccgaggaggacgggctgtcgcgggagatggcg 27663652 Query: 492 cgggtgcaggagggcgacggc 512 | ||||||||||||| ||||| Sbjct: 27663651 ctggtgcaggagggccacggc 27663631 Score = 178 bits (90), Expect = 3e-41 Identities = 117/126 (92%) Strand = Plus / Minus Query: 585 gccgacgcgctgcggctgcgcaccatgaagcgcgccgtggagatcctcgagccggcgcag 644 ||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 27663561 gccgacgcgctccggctgcgcaccgtgaagcgcgcggtggagatcctcgagccggcgcag 27663502 Query: 645 gcctccgagctgctcgtcgccgcggcggacatggagatcgggttccgtgagttcgggctc 704 || ||||||||||||||||||| || |||||||||||||| ||||| |||||||||||| Sbjct: 27663501 gcggccgagctgctcgtcgccgccgccgacatggagatcggcttccgggagttcgggctc 27663442 Query: 705 aagtac 710 |||||| Sbjct: 27663441 aagtac 27663436 Score = 107 bits (54), Expect = 8e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 54 gcgatggagctggaggcggcgaggcggcgcttccagctctggctccgcgggctgcggtcg 113 ||||||||| |||||||||||| |||||| ||||| ||||||||||||||||||||| | Sbjct: 27664089 gcgatggaggtggaggcggcgacgcggcggttccacctctggctccgcgggctgcggggg 27664030 Query: 114 ctgcgccgcgacctccgcacggcgcgctgggccgacgacccggcgcagct 163 ||||| ||||| ||||| |||| || ||||| ||||||||||| ||||| Sbjct: 27664029 ctgcggcgcgagctccgggcggcccggtgggcggacgacccggcccagct 27663980 Score = 50.1 bits (25), Expect = 0.016 Identities = 31/33 (93%) Strand = Plus / Minus Query: 210 gcggcgcgcgcggagctggacccggtgtggacg 242 |||||||| |||||| ||||||||||||||||| Sbjct: 27663933 gcggcgcgggcggagatggacccggtgtggacg 27663901 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 ggcgatggagctggaggcggcg 74 |||||||||||||||||||||| Sbjct: 29239979 ggcgatggagctggaggcggcg 29240000 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 agctcgccaagctggtggccg 180 ||||||||||||||||||||| Sbjct: 19955582 agctcgccaagctggtggccg 19955602
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Minus Query: 135 gcgcgctgggccgacgacccggc 157 ||||||||||||||||||||||| Sbjct: 125784 gcgcgctgggccgacgacccggc 125762
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Plus Query: 135 gcgcgctgggccgacgacccggc 157 ||||||||||||||||||||||| Sbjct: 154887 gcgcgctgggccgacgacccggc 154909
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 46.1 bits (23), Expect = 0.25 Identities = 23/23 (100%) Strand = Plus / Minus Query: 135 gcgcgctgggccgacgacccggc 157 ||||||||||||||||||||||| Sbjct: 17778 gcgcgctgggccgacgacccggc 17756
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Plus Query: 605 caccatgaagcgcgccgtggag 626 |||||||||||||||||||||| Sbjct: 4650549 caccatgaagcgcgccgtggag 4650570
>emb|CT837739.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA048L02, full insert sequence Length = 1578 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Plus Query: 710 cgacggcgtcggcgccggcggc 731 |||||||||||||||||||||| Sbjct: 417 cgacggcgtcggcgccggcggc 438
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Plus Query: 709 acgacggcgtcggcgccggcgg 730 |||||||||||||||||||||| Sbjct: 1731757 acgacggcgtcggcgccggcgg 1731778 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 ggcgcagctcgccaagctggt 175 ||||||||||||||||||||| Sbjct: 7251929 ggcgcagctcgccaagctggt 7251949
>ref|NM_001063490.1| Oryza sativa (japonica cultivar-group) Os06g0176300 (Os06g0176300) mRNA, complete cds Length = 924 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Plus Query: 710 cgacggcgtcggcgccggcggc 731 |||||||||||||||||||||| Sbjct: 387 cgacggcgtcggcgccggcggc 408
>ref|NM_001063025.1| Oryza sativa (japonica cultivar-group) Os05g0591500 (Os05g0591500) mRNA, complete cds Length = 3038 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 ggcgatggagctggaggcggcg 74 |||||||||||||||||||||| Sbjct: 273 ggcgatggagctggaggcggcg 294
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Plus Query: 435 gacgagctgcagcgccgcaccg 456 |||||||||||||||||||||| Sbjct: 4351404 gacgagctgcagcgccgcaccg 4351425
>ref|XM_001081120.1| PREDICTED: Rattus norvegicus protein phosphatase 1D magnesium-dependent, delta isoform (predicted) (Ppm1d_predicted), mRNA Length = 3087 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Plus Query: 514 tggtgggcgcgggcggggagct 535 |||||||||||||||||||||| Sbjct: 144 tggtgggcgcgggcggggagct 165
>ref|XM_213418.4| PREDICTED: Rattus norvegicus protein phosphatase 1D magnesium-dependent, delta isoform (predicted) (Ppm1d_predicted), mRNA Length = 3087 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Plus Query: 514 tggtgggcgcgggcggggagct 535 |||||||||||||||||||||| Sbjct: 144 tggtgggcgcgggcggggagct 165
>gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022J22, complete sequence Length = 142854 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 ggcgatggagctggaggcggcg 74 |||||||||||||||||||||| Sbjct: 123438 ggcgatggagctggaggcggcg 123459
>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08, complete sequence Length = 142196 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 ggcgatggagctggaggcggcg 74 |||||||||||||||||||||| Sbjct: 18636 ggcgatggagctggaggcggcg 18657
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Plus Query: 710 cgacggcgtcggcgccggcggc 731 |||||||||||||||||||||| Sbjct: 3845514 cgacggcgtcggcgccggcggc 3845535 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Plus Query: 710 cgacggcgtcggcgccggcggc 731 |||||||||||||||||||||| Sbjct: 3883570 cgacggcgtcggcgccggcggc 3883591 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Plus Query: 710 cgacggcgtcggcgccggcggc 731 |||||||||||||||||||||| Sbjct: 3895393 cgacggcgtcggcgccggcggc 3895414
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.98 Identities = 25/26 (96%) Strand = Plus / Minus Query: 706 agtacgacggcgtcggcgccggcggc 731 ||||||||||| |||||||||||||| Sbjct: 8056322 agtacgacggcctcggcgccggcggc 8056297 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 546 ggcgggctcgtcggccgcgtc 566 ||||||||||||||||||||| Sbjct: 2285482 ggcgggctcgtcggccgcgtc 2285462
>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0035I03 Length = 153749 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Plus Query: 710 cgacggcgtcggcgccggcggc 731 |||||||||||||||||||||| Sbjct: 1269 cgacggcgtcggcgccggcggc 1290
>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0015E04 Length = 152046 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Plus Query: 710 cgacggcgtcggcgccggcggc 731 |||||||||||||||||||||| Sbjct: 103468 cgacggcgtcggcgccggcggc 103489 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Plus Query: 710 cgacggcgtcggcgccggcggc 731 |||||||||||||||||||||| Sbjct: 141524 cgacggcgtcggcgccggcggc 141545
>dbj|AK073891.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075A18, full insert sequence Length = 3039 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Plus Query: 53 ggcgatggagctggaggcggcg 74 |||||||||||||||||||||| Sbjct: 274 ggcgatggagctggaggcggcg 295
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 44.1 bits (22), Expect = 0.98 Identities = 22/22 (100%) Strand = Plus / Minus Query: 605 caccatgaagcgcgccgtggag 626 |||||||||||||||||||||| Sbjct: 4587510 caccatgaagcgcgccgtggag 4587489
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 44.1 bits (22), Expect = 0.98 Identities = 25/26 (96%) Strand = Plus / Minus Query: 142 gggccgacgacccggcgcagctcgcc 167 |||||| ||||||||||||||||||| Sbjct: 2577457 gggccgccgacccggcgcagctcgcc 2577432 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 133 cggcgcgctgggccgacgacccggc 157 ||||||||||||||| ||||||||| Sbjct: 634355 cggcgcgctgggccggcgacccggc 634331
>emb|AM238664.1| Streptomyces ambofaciens ATCC 23877 right chromosomal arm Length = 1367119 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 gcggcgcgcgcggagctggac 230 ||||||||||||||||||||| Sbjct: 1366001 gcggcgcgcgcggagctggac 1365981
>ref|NM_001071240.1| Oryza sativa (japonica cultivar-group) Os10g0444100 (Os10g0444100) mRNA, complete cds Length = 1275 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 gcgatggagctggaggcggcg 74 ||||||||||||||||||||| Sbjct: 257 gcgatggagctggaggcggcg 277
>emb|CU074422.1| M.spretus DNA sequence from clone XX-CH35_123K8 on chromosome 7, complete sequence Length = 195668 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 406 acctcagccccgcccagctgg 426 ||||||||||||||||||||| Sbjct: 168510 acctcagccccgcccagctgg 168530
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 3.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 375 ctgctgggcgtgcggtcgggcaacctcggcgac 407 |||||||| |||||| |||||||||||| |||| Sbjct: 2389157 ctgctgggggtgcgggcgggcaacctcgtcgac 2389189
>ref|XM_001098677.1| PREDICTED: Macaca mulatta tumor differentially expressed 2-like (SERINC2), mRNA Length = 2149 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 410 cagccccgcccagctggcgcagatc 434 |||||||||||||||||| |||||| Sbjct: 1617 cagccccgcccagctggcacagatc 1593
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 cggccgccgcttcgaggcgca 361 ||||||||||||||||||||| Sbjct: 3661707 cggccgccgcttcgaggcgca 3661727
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 gacccggcgcagctcgccaag 170 ||||||||||||||||||||| Sbjct: 1931081 gacccggcgcagctcgccaag 1931101
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 546 ggcgggctcgtcggccgcgtcggcg 570 |||||| |||||||||||||||||| Sbjct: 2327547 ggcggggtcgtcggccgcgtcggcg 2327571
>ref|XM_362592.1| Magnaporthe grisea 70-15 hypothetical protein (MG08175.4) partial mRNA Length = 915 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 aggcggcgaggcggcgcttcc 87 ||||||||||||||||||||| Sbjct: 288 aggcggcgaggcggcgcttcc 308
>gb|AC130729.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668F02, complete sequence Length = 178061 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 agctcgccaagctggtggccg 180 ||||||||||||||||||||| Sbjct: 96746 agctcgccaagctggtggccg 96766
>gb|AY452667.1| Chlamydomonas reinhardtii flagellar radial spoke nucleoside diphosphate kinase mRNA, complete cds Length = 2219 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 143 ggccgacgacccggcgcagct 163 ||||||||||||||||||||| Sbjct: 1186 ggccgacgacccggcgcagct 1206
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 cggggccgacgcgctgcggct 601 ||||||||||||||||||||| Sbjct: 286839 cggggccgacgcgctgcggct 286819
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 547 gcgggctcgtcggccgcgtcggcgc 571 |||||||||||||| |||||||||| Sbjct: 1258453 gcgggctcgtcggcggcgtcggcgc 1258429
>gb|AC130836.4| Mus musculus BAC clone RP24-147P10 from chromosome Y, complete sequence Length = 199089 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 955 agacaagtaataaaatgcaga 975 ||||||||||||||||||||| Sbjct: 51410 agacaagtaataaaatgcaga 51430
>ref|XM_544448.2| PREDICTED: Canis familiaris similar to Tumor differentially expressed 2-like (LOC487322), mRNA Length = 1389 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 410 cagccccgcccagctggcgcagatc 434 |||||||||||||||||| |||||| Sbjct: 1329 cagccccgcccagctggcacagatc 1305
>gb|BC031720.1| Mus musculus serine incorporator 2, mRNA (cDNA clone MGC:25877 IMAGE:4209575), complete cds Length = 1868 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 410 cagccccgcccagctggcgcagatc 434 |||||||||||||||||| |||||| Sbjct: 1364 cagccccgcccagctggcacagatc 1340
>dbj|AK158914.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K530006E21 product:hypothetical protein, full insert sequence Length = 1881 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 410 cagccccgcccagctggcgcagatc 434 |||||||||||||||||| |||||| Sbjct: 1389 cagccccgcccagctggcacagatc 1365
>gb|AC073391.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0015F09b, complete sequence Length = 108964 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 gcgatggagctggaggcggcg 74 ||||||||||||||||||||| Sbjct: 67269 gcgatggagctggaggcggcg 67289
>gb|AE012121.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 29 of 460 of the complete genome Length = 10770 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 155 ggcgcagctcgccaagctggtggcc 179 ||||||||| ||||||||||||||| Sbjct: 9841 ggcgcagctggccaagctggtggcc 9865
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 552 ctcgtcggccgcgtcggcgca 572 ||||||||||||||||||||| Sbjct: 1762620 ctcgtcggccgcgtcggcgca 1762600
>gb|AC157099.5| Mus musculus 6 BAC RP24-467O4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173237 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 811 gctggtttgactgggacaggg 831 ||||||||||||||||||||| Sbjct: 71874 gctggtttgactgggacaggg 71854
>ref|NM_172702.1| Mus musculus serine incorporator 2 (Serinc2), mRNA dbj|AK075863.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310004K20 product:FKSG84 homolog [Homo sapiens], full insert sequence Length = 1842 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 410 cagccccgcccagctggcgcagatc 434 |||||||||||||||||| |||||| Sbjct: 1351 cagccccgcccagctggcacagatc 1327
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 gcgatggagctggaggcggcg 74 ||||||||||||||||||||| Sbjct: 15483923 gcgatggagctggaggcggcg 15483943
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 155 ggcgcagctcgccaagctggtggcc 179 ||||||||| ||||||||||||||| Sbjct: 319998 ggcgcagctggccaagctggtggcc 320022
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 cggggccgacgcgctgcggct 601 ||||||||||||||||||||| Sbjct: 1612625 cggggccgacgcgctgcggct 1612605
>emb|AJ251835.1|MMU251835 Mus musculus Kcnq1, Ltrpc5, Mash2, Tapa-1, Tssc4 and Tssc6 genes, alternative transcripts Length = 249487 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 406 acctcagccccgcccagctgg 426 ||||||||||||||||||||| Sbjct: 186395 acctcagccccgcccagctgg 186375
>gb|AC142166.6| Mus musculus BAC clone RP24-455G9 from chromosome y, complete sequence Length = 169731 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 955 agacaagtaataaaatgcaga 975 ||||||||||||||||||||| Sbjct: 20425 agacaagtaataaaatgcaga 20405
>gb|AC159712.7| Mus musculus BAC RP23-236J3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221910 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 811 gctggtttgactgggacaggg 831 ||||||||||||||||||||| Sbjct: 1523 gctggtttgactgggacaggg 1543
>gb|AC015800.13| Mus musculus chromosome 7, clone RP23-366M16, complete sequence Length = 200026 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 406 acctcagccccgcccagctgg 426 ||||||||||||||||||||| Sbjct: 73137 acctcagccccgcccagctgg 73157
>dbj|AK071645.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105M22, full insert sequence Length = 1276 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 gcgatggagctggaggcggcg 74 ||||||||||||||||||||| Sbjct: 258 gcgatggagctggaggcggcg 278
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 551 gctcgtcggccgcgtcggcgc 571 ||||||||||||||||||||| Sbjct: 1488666 gctcgtcggccgcgtcggcgc 1488646
>emb|AJ251788.1|MMU251788 Mus musculus Tssc6 gene Length = 249487 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 406 acctcagccccgcccagctgg 426 ||||||||||||||||||||| Sbjct: 186395 acctcagccccgcccagctgg 186375
>emb|AL606925.16| Mouse DNA sequence from clone RP23-12J1 on chromosome 4, complete sequence Length = 239244 Score = 42.1 bits (21), Expect = 3.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 410 cagccccgcccagctggcgcagatc 434 |||||||||||||||||| |||||| Sbjct: 219384 cagccccgcccagctggcacagatc 219408
>dbj|AP002736.1| Mus musculus genomic DNA, chromosome 7, clone:B308O17, complete sequences Length = 93265 Score = 42.1 bits (21), Expect = 3.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 406 acctcagccccgcccagctgg 426 ||||||||||||||||||||| Sbjct: 53562 acctcagccccgcccagctgg 53542 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 122,995,697 Number of extensions: 6930007 Number of successful extensions: 180866 Number of sequences better than 10.0: 57 Number of HSP's gapped: 180866 Number of HSP's successfully gapped: 74 Length of query: 1026 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1003 Effective length of database: 18,503,978,556 Effective search space: 18559490491668 Effective search space used: 18559490491668 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
