Clone Name | FLbaf95h17 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AK060040:Os01g0708300 | 421 | e-117 | 2 | AK073555:Os01g0708300 | 214 | 2e-55 | 3 | AK103484:Os01g0873700 | 37 | 0.095 | 4 | AK121485:Os05g0430700 | 35 | 0.28 | 5 | AK121440:Os06g0715700 | 35 | 0.36 | 6 | Os04g0373000:Os04g0373000 | 31 | 4.0 | 7 | AK067849:Os11g0433500 | 31 | 4.0 | 8 | AK070769:Os08g0202400 | 31 | 5.2 | 9 | AK121532:Os04g0529700 | 30 | 6.8 | 10 | AK109872:Os03g0599500 | 30 | 6.8 | 11 | Os10g0200800:Os10g0200800 | 30 | 8.9 | 12 | Os09g0129800:Os09g0129800 | 30 | 8.9 | 13 | AK066615:Os03g0808600 | 30 | 8.9 |
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>AK060040:Os01g0708300 | Length = 292 Score = 421 bits (1081), Expect = e-117 Identities = 215/277 (77%), Positives = 224/277 (80%) Frame = +2 Query: 47 MWESVALTLAGAAGNSIGKVLQKKGTLILPPLSFKLKVIRGYALNRLWISGFLLDMCGAA 226 MWESVALTLAGAAGN++GKVLQKKGT ILPPLSFKLKVIR YALNRLWISGFL+DMCGAA Sbjct: 1 MWESVALTLAGAAGNNVGKVLQKKGTHILPPLSFKLKVIRAYALNRLWISGFLMDMCGAA 60 Query: 227 LMLTALSQAPVSVVQPIAGCGLAILCVFSHFYLKEVMNGLDWIAITMAXXXXXXXXXXXX 406 LMLTALSQAPVSVVQPIAGCGLAILCVFSHFYLKE MNGLDW+AIT+A Sbjct: 61 LMLTALSQAPVSVVQPIAGCGLAILCVFSHFYLKESMNGLDWVAITLAGLGTIGVGVGGE 120 Query: 407 XXXXXXIPLFSIPWXXXXXXXXXXXXNTWLHIYKKQRREQELTGPEVIEEVIYGLESGIL 586 IPLF+IPW NTWLHIYK+QRREQELTGPEVIEE+IYGLESGIL Sbjct: 121 EQKVDKIPLFNIPWLVLSIVILFVLLNTWLHIYKRQRREQELTGPEVIEEIIYGLESGIL 180 Query: 587 FGISSVISKMGFVMSEMGFPKIVVPAAISCSVTCSAVGFVYQTRGLKHGRAIVVSTCTXX 766 FGISSVISK GFVMSEMGFPKIVVPAAISCSV CSAVGFVYQTRGLKHGRAIVVSTCT Sbjct: 181 FGISSVISKTGFVMSEMGFPKIVVPAAISCSVGCSAVGFVYQTRGLKHGRAIVVSTCTSV 240 Query: 767 XXXXXXXXXXXXXLDEHLPTAPSGRFFLLLGW*FHYT 877 LDEHLPTAP+GRFFLLLGW F T Sbjct: 241 ASIVSGVVAGMIALDEHLPTAPTGRFFLLLGWFFIIT 277 Score = 37.7 bits (86), Expect = 0.043 Identities = 18/20 (90%), Positives = 20/20 (100%) Frame = +1 Query: 2155 FFIITGVILLVTSTRVIARL 2214 FFIITGVILLV+STR+IARL Sbjct: 273 FFIITGVILLVSSTRIIARL 292
>AK073555:Os01g0708300 | Length = 200 Score = 214 bits (546), Expect = 2e-55 Identities = 108/131 (82%), Positives = 111/131 (84%) Frame = +2 Query: 485 NTWLHIYKKQRREQELTGPEVIEEVIYGLESGILFGISSVISKMGFVMSEMGFPKIVVPA 664 NTWLHIYK+QRREQELTGPEVIEE+IYGLESGILFGISSVISK GFVMSEMGFPKIVVPA Sbjct: 4 NTWLHIYKRQRREQELTGPEVIEEIIYGLESGILFGISSVISKTGFVMSEMGFPKIVVPA 63 Query: 665 AISCSVTCSAVGFVYQTRGLKHGRAIVVSTCTXXXXXXXXXXXXXXXLDEHLPTAPSGRF 844 AISCSV CSAVGFVYQTRGLKHGRAIVVSTCT LDEHLPTAP+GRF Sbjct: 64 AISCSVGCSAVGFVYQTRGLKHGRAIVVSTCTSVASIVSGVVAGMIALDEHLPTAPTGRF 123 Query: 845 FLLLGW*FHYT 877 FLLLGW F T Sbjct: 124 FLLLGWFFIIT 134 Score = 117 bits (292), Expect = 6e-26 Identities = 58/71 (81%), Positives = 65/71 (91%) Frame = +1 Query: 2155 FFIITGVILLVTSTRVIARLPKPVQKFLKSNMERSHSIRRPGSARGKDPNQSTTIHASTL 2334 FFIITGVILLV+STR+IARLP+ +QKFLKSN+ER+HSIRRP SARGKDP STTIHASTL Sbjct: 130 FFIITGVILLVSSTRIIARLPRSMQKFLKSNVERTHSIRRPSSARGKDPIPSTTIHASTL 189 Query: 2335 HILTSTGKEKA 2367 H+LTS KEKA Sbjct: 190 HLLTSPSKEKA 200
>AK103484:Os01g0873700 | Length = 363 Score = 36.6 bits (83), Expect = 0.095 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 1/90 (1%) Frame = +2 Query: 65 LTLAGAAGNSIGKVLQKKGTLILPPLSFKLKVIR-GYALNRLWISGFLLDMCGAALMLTA 241 L +A +A + +++KKG L + V GY L LW G + + G A Sbjct: 29 LAVASSAFIGVSFIVKKKGLLRAGAAGSRAGVGGYGYLLEPLWWVGMVTMLVGEIANFIA 88 Query: 242 LSQAPVSVVQPIAGCGLAILCVFSHFYLKE 331 AP +V P+ + + V +HF L E Sbjct: 89 YMFAPAVLVTPLGALSIIVSAVLAHFTLNE 118
>AK121485:Os05g0430700 | Length = 355 Score = 35.0 bits (79), Expect = 0.28 Identities = 17/55 (30%), Positives = 24/55 (43%) Frame = +2 Query: 167 GYALNRLWISGFLLDMCGAALMLTALSQAPVSVVQPIAGCGLAILCVFSHFYLKE 331 GY L LW G + + G A AP +V P+ + + V +HF L E Sbjct: 57 GYLLEPLWWVGMITMLIGEIANFVAYMFAPAVLVTPLGALSIIVSAVLAHFILNE 111
>AK121440:Os06g0715700 | Length = 344 Score = 34.7 bits (78), Expect = 0.36 Identities = 17/59 (28%), Positives = 27/59 (45%) Frame = +2 Query: 170 YALNRLWISGFLLDMCGAALMLTALSQAPVSVVQPIAGCGLAILCVFSHFYLKEVMNGL 346 Y L LW +G + + G A + AP +V P+ + + +HF LKE + L Sbjct: 48 YLLEPLWWAGMMTMLLGEIANFVAYTFAPAVLVTPLGALSIIVSSFLAHFVLKERLEKL 106
>Os04g0373000:Os04g0373000 | Length = 389 Score = 31.2 bits (69), Expect = 4.0 Identities = 16/54 (29%), Positives = 22/54 (40%) Frame = +2 Query: 170 YALNRLWISGFLLDMCGAALMLTALSQAPVSVVQPIAGCGLAILCVFSHFYLKE 331 Y LW G + G A + AP +V P+ + V +HF LKE Sbjct: 165 YLYEPLWWIGMTAMILGEVANFAAYAFAPAILVTPLGALSIIFSAVLAHFILKE 218
>AK067849:Os11g0433500 | Length = 351 Score = 31.2 bits (69), Expect = 4.0 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = +3 Query: 2280 ISPRE-GSQPKHNNPCIDITYTNLYRKRKGLEQLLVEQDCLNTFDGS 2417 +SP E SQP H NP + I + Y+ +G ++ V C DGS Sbjct: 50 VSPSERSSQPGHQNPDLYIQFVTSYQHPEGQMRIRVTTICRKWVDGS 96
>AK070769:Os08g0202400 | Length = 963 Score = 30.8 bits (68), Expect = 5.2 Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 2/65 (3%) Frame = +2 Query: 119 GTLILPPLSFKLKVIRGYALNRL--WISGFLLDMCGAALMLTALSQAPVSVVQPIAGCGL 292 G+L PPL+ + + G+ L R+ WI+G L ++C L +T +S V ++ + L Sbjct: 748 GSLSNPPLNIERLHLGGWRLRRVPRWINGHLQNLCFLVLDVTEMSTDEVRLLGELP--SL 805 Query: 293 AILCV 307 + LC+ Sbjct: 806 SELCL 810
>AK121532:Os04g0529700 | Length = 464 Score = 30.4 bits (67), Expect = 6.8 Identities = 18/42 (42%), Positives = 23/42 (54%) Frame = -1 Query: 1262 SLPPPVLPIITTSTSPRYM*SVPPPVTPHHAALPCDHNRKSS 1137 S PPP P TT+T+P +PPP P A P N+K+S Sbjct: 103 SSPPPPTP--TTTTTPTPTPPLPPPAPP---ASPAKSNKKAS 139
>AK109872:Os03g0599500 | Length = 195 Score = 30.4 bits (67), Expect = 6.8 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 7/60 (11%) Frame = -3 Query: 309 KTQSMARPQPAIGCTTETGACESAVSMRAAPHMSRRKPLIQSLL-------SA*PRMTLS 151 +T S RP P GCTT +C S+ R +RR +S+L +A P TLS Sbjct: 63 RTHSFLRPPPRAGCTT---SCSSSAGTRRRSSFARRGRRDRSILPPPPAWAAAAPHRTLS 119
>Os10g0200800:Os10g0200800 | Length = 847 Score = 30.0 bits (66), Expect = 8.9 Identities = 15/30 (50%), Positives = 17/30 (56%) Frame = -1 Query: 1256 PPPVLPIITTSTSPRYM*SVPPPVTPHHAA 1167 P P P TTST+ + P PVTPH AA Sbjct: 150 PTPTHPRATTSTTTSSSPTPPQPVTPHAAA 179
>Os09g0129800:Os09g0129800 | Length = 577 Score = 30.0 bits (66), Expect = 8.9 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = -2 Query: 769 CHRCTCGHNNCPPMLETSSLINKSDSTAGHTTRNGSWHNNLRKA 638 C RC + P L L++ + GHTT +G H + R A Sbjct: 250 CRRCWASTTSPPACLRRRRLVSPPTQSVGHTTVDGHHHLHRRPA 293
>AK066615:Os03g0808600 | Length = 538 Score = 30.0 bits (66), Expect = 8.9 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 2/87 (2%) Frame = -1 Query: 2300 GSFPRADPGLLMLCERSMLLFRNFCTGLGRRAITRVEVTRSITPVIMKNLKGEPTL--YC 2127 G R + G+ LC + R C + +R + TPV +++++ E + + Sbjct: 68 GELGRGEFGITYLCTEAETGDRYACKSISKRKLR--------TPVDVEDVRREVEIMRHM 119 Query: 2126 PSQPILKSGAEVREHEETTHLFNPVCQ 2046 PS P + S E E+ HL +C+ Sbjct: 120 PSHPNIVSLRAAYEDEDNVHLVMELCE 146 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 78,644,980 Number of extensions: 1895473 Number of successful extensions: 5960 Number of sequences better than 10.0: 13 Number of HSP's gapped: 5938 Number of HSP's successfully gapped: 15 Length of query: 906 Length of database: 15,399,855 Length adjustment: 110 Effective length of query: 796 Effective length of database: 10,995,345 Effective search space: 8752294620 Effective search space used: 8752294620 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)