ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf95h17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK060040:Os01g0708300 421 e-117
2AK073555:Os01g0708300 214 2e-55
3AK103484:Os01g0873700 37 0.095
4AK121485:Os05g0430700 35 0.28
5AK121440:Os06g0715700 35 0.36
6Os04g0373000:Os04g0373000 31 4.0
7AK067849:Os11g0433500 31 4.0
8AK070769:Os08g0202400 31 5.2
9AK121532:Os04g0529700 30 6.8
10AK109872:Os03g0599500 30 6.8
11Os10g0200800:Os10g0200800 30 8.9
12Os09g0129800:Os09g0129800 30 8.9
13AK066615:Os03g0808600 30 8.9

>AK060040:Os01g0708300 |
          Length = 292
 Score =  421 bits (1081), Expect = e-117
 Identities = 215/277 (77%), Positives = 224/277 (80%)
 Frame = +2

Query: 47  MWESVALTLAGAAGNSIGKVLQKKGTLILPPLSFKLKVIRGYALNRLWISGFLLDMCGAA 226
           MWESVALTLAGAAGN++GKVLQKKGT ILPPLSFKLKVIR YALNRLWISGFL+DMCGAA
Sbjct: 1   MWESVALTLAGAAGNNVGKVLQKKGTHILPPLSFKLKVIRAYALNRLWISGFLMDMCGAA 60

Query: 227 LMLTALSQAPVSVVQPIAGCGLAILCVFSHFYLKEVMNGLDWIAITMAXXXXXXXXXXXX 406
           LMLTALSQAPVSVVQPIAGCGLAILCVFSHFYLKE MNGLDW+AIT+A            
Sbjct: 61  LMLTALSQAPVSVVQPIAGCGLAILCVFSHFYLKESMNGLDWVAITLAGLGTIGVGVGGE 120

Query: 407 XXXXXXIPLFSIPWXXXXXXXXXXXXNTWLHIYKKQRREQELTGPEVIEEVIYGLESGIL 586
                 IPLF+IPW            NTWLHIYK+QRREQELTGPEVIEE+IYGLESGIL
Sbjct: 121 EQKVDKIPLFNIPWLVLSIVILFVLLNTWLHIYKRQRREQELTGPEVIEEIIYGLESGIL 180

Query: 587 FGISSVISKMGFVMSEMGFPKIVVPAAISCSVTCSAVGFVYQTRGLKHGRAIVVSTCTXX 766
           FGISSVISK GFVMSEMGFPKIVVPAAISCSV CSAVGFVYQTRGLKHGRAIVVSTCT  
Sbjct: 181 FGISSVISKTGFVMSEMGFPKIVVPAAISCSVGCSAVGFVYQTRGLKHGRAIVVSTCTSV 240

Query: 767 XXXXXXXXXXXXXLDEHLPTAPSGRFFLLLGW*FHYT 877
                        LDEHLPTAP+GRFFLLLGW F  T
Sbjct: 241 ASIVSGVVAGMIALDEHLPTAPTGRFFLLLGWFFIIT 277



 Score = 37.7 bits (86), Expect = 0.043
 Identities = 18/20 (90%), Positives = 20/20 (100%)
 Frame = +1

Query: 2155 FFIITGVILLVTSTRVIARL 2214
            FFIITGVILLV+STR+IARL
Sbjct: 273  FFIITGVILLVSSTRIIARL 292



to top

>AK073555:Os01g0708300 |
          Length = 200

 Score =  214 bits (546), Expect = 2e-55
 Identities = 108/131 (82%), Positives = 111/131 (84%)
 Frame = +2

Query: 485 NTWLHIYKKQRREQELTGPEVIEEVIYGLESGILFGISSVISKMGFVMSEMGFPKIVVPA 664
           NTWLHIYK+QRREQELTGPEVIEE+IYGLESGILFGISSVISK GFVMSEMGFPKIVVPA
Sbjct: 4   NTWLHIYKRQRREQELTGPEVIEEIIYGLESGILFGISSVISKTGFVMSEMGFPKIVVPA 63

Query: 665 AISCSVTCSAVGFVYQTRGLKHGRAIVVSTCTXXXXXXXXXXXXXXXLDEHLPTAPSGRF 844
           AISCSV CSAVGFVYQTRGLKHGRAIVVSTCT               LDEHLPTAP+GRF
Sbjct: 64  AISCSVGCSAVGFVYQTRGLKHGRAIVVSTCTSVASIVSGVVAGMIALDEHLPTAPTGRF 123

Query: 845 FLLLGW*FHYT 877
           FLLLGW F  T
Sbjct: 124 FLLLGWFFIIT 134



 Score =  117 bits (292), Expect = 6e-26
 Identities = 58/71 (81%), Positives = 65/71 (91%)
 Frame = +1

Query: 2155 FFIITGVILLVTSTRVIARLPKPVQKFLKSNMERSHSIRRPGSARGKDPNQSTTIHASTL 2334
            FFIITGVILLV+STR+IARLP+ +QKFLKSN+ER+HSIRRP SARGKDP  STTIHASTL
Sbjct: 130  FFIITGVILLVSSTRIIARLPRSMQKFLKSNVERTHSIRRPSSARGKDPIPSTTIHASTL 189

Query: 2335 HILTSTGKEKA 2367
            H+LTS  KEKA
Sbjct: 190  HLLTSPSKEKA 200



to top

>AK103484:Os01g0873700 |
          Length = 363

 Score = 36.6 bits (83), Expect = 0.095
 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
 Frame = +2

Query: 65  LTLAGAAGNSIGKVLQKKGTLILPPLSFKLKVIR-GYALNRLWISGFLLDMCGAALMLTA 241
           L +A +A   +  +++KKG L       +  V   GY L  LW  G +  + G      A
Sbjct: 29  LAVASSAFIGVSFIVKKKGLLRAGAAGSRAGVGGYGYLLEPLWWVGMVTMLVGEIANFIA 88

Query: 242 LSQAPVSVVQPIAGCGLAILCVFSHFYLKE 331
              AP  +V P+    + +  V +HF L E
Sbjct: 89  YMFAPAVLVTPLGALSIIVSAVLAHFTLNE 118



to top

>AK121485:Os05g0430700 |
          Length = 355

 Score = 35.0 bits (79), Expect = 0.28
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +2

Query: 167 GYALNRLWISGFLLDMCGAALMLTALSQAPVSVVQPIAGCGLAILCVFSHFYLKE 331
           GY L  LW  G +  + G      A   AP  +V P+    + +  V +HF L E
Sbjct: 57  GYLLEPLWWVGMITMLIGEIANFVAYMFAPAVLVTPLGALSIIVSAVLAHFILNE 111



to top

>AK121440:Os06g0715700 |
          Length = 344

 Score = 34.7 bits (78), Expect = 0.36
 Identities = 17/59 (28%), Positives = 27/59 (45%)
 Frame = +2

Query: 170 YALNRLWISGFLLDMCGAALMLTALSQAPVSVVQPIAGCGLAILCVFSHFYLKEVMNGL 346
           Y L  LW +G +  + G      A + AP  +V P+    + +    +HF LKE +  L
Sbjct: 48  YLLEPLWWAGMMTMLLGEIANFVAYTFAPAVLVTPLGALSIIVSSFLAHFVLKERLEKL 106



to top

>Os04g0373000:Os04g0373000 |
          Length = 389

 Score = 31.2 bits (69), Expect = 4.0
 Identities = 16/54 (29%), Positives = 22/54 (40%)
 Frame = +2

Query: 170 YALNRLWISGFLLDMCGAALMLTALSQAPVSVVQPIAGCGLAILCVFSHFYLKE 331
           Y    LW  G    + G      A + AP  +V P+    +    V +HF LKE
Sbjct: 165 YLYEPLWWIGMTAMILGEVANFAAYAFAPAILVTPLGALSIIFSAVLAHFILKE 218



to top

>AK067849:Os11g0433500 |
          Length = 351

 Score = 31.2 bits (69), Expect = 4.0
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +3

Query: 2280 ISPRE-GSQPKHNNPCIDITYTNLYRKRKGLEQLLVEQDCLNTFDGS 2417
            +SP E  SQP H NP + I +   Y+  +G  ++ V   C    DGS
Sbjct: 50   VSPSERSSQPGHQNPDLYIQFVTSYQHPEGQMRIRVTTICRKWVDGS 96



to top

>AK070769:Os08g0202400 |
          Length = 963

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
 Frame = +2

Query: 119 GTLILPPLSFKLKVIRGYALNRL--WISGFLLDMCGAALMLTALSQAPVSVVQPIAGCGL 292
           G+L  PPL+ +   + G+ L R+  WI+G L ++C   L +T +S   V ++  +    L
Sbjct: 748 GSLSNPPLNIERLHLGGWRLRRVPRWINGHLQNLCFLVLDVTEMSTDEVRLLGELP--SL 805

Query: 293 AILCV 307
           + LC+
Sbjct: 806 SELCL 810



to top

>AK121532:Os04g0529700 |
          Length = 464

 Score = 30.4 bits (67), Expect = 6.8
 Identities = 18/42 (42%), Positives = 23/42 (54%)
 Frame = -1

Query: 1262 SLPPPVLPIITTSTSPRYM*SVPPPVTPHHAALPCDHNRKSS 1137
            S PPP  P  TT+T+P     +PPP  P   A P   N+K+S
Sbjct: 103  SSPPPPTP--TTTTTPTPTPPLPPPAPP---ASPAKSNKKAS 139



to top

>AK109872:Os03g0599500 |
          Length = 195

 Score = 30.4 bits (67), Expect = 6.8
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
 Frame = -3

Query: 309 KTQSMARPQPAIGCTTETGACESAVSMRAAPHMSRRKPLIQSLL-------SA*PRMTLS 151
           +T S  RP P  GCTT   +C S+   R     +RR    +S+L       +A P  TLS
Sbjct: 63  RTHSFLRPPPRAGCTT---SCSSSAGTRRRSSFARRGRRDRSILPPPPAWAAAAPHRTLS 119



to top

>Os10g0200800:Os10g0200800 |
          Length = 847

 Score = 30.0 bits (66), Expect = 8.9
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = -1

Query: 1256 PPPVLPIITTSTSPRYM*SVPPPVTPHHAA 1167
            P P  P  TTST+     + P PVTPH AA
Sbjct: 150  PTPTHPRATTSTTTSSSPTPPQPVTPHAAA 179



to top

>Os09g0129800:Os09g0129800 |
          Length = 577

 Score = 30.0 bits (66), Expect = 8.9
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -2

Query: 769 CHRCTCGHNNCPPMLETSSLINKSDSTAGHTTRNGSWHNNLRKA 638
           C RC     + P  L    L++    + GHTT +G  H + R A
Sbjct: 250 CRRCWASTTSPPACLRRRRLVSPPTQSVGHTTVDGHHHLHRRPA 293



to top

>AK066615:Os03g0808600 |
          Length = 538

 Score = 30.0 bits (66), Expect = 8.9
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
 Frame = -1

Query: 2300 GSFPRADPGLLMLCERSMLLFRNFCTGLGRRAITRVEVTRSITPVIMKNLKGEPTL--YC 2127
            G   R + G+  LC  +    R  C  + +R +         TPV +++++ E  +  + 
Sbjct: 68   GELGRGEFGITYLCTEAETGDRYACKSISKRKLR--------TPVDVEDVRREVEIMRHM 119

Query: 2126 PSQPILKSGAEVREHEETTHLFNPVCQ 2046
            PS P + S     E E+  HL   +C+
Sbjct: 120  PSHPNIVSLRAAYEDEDNVHLVMELCE 146


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 78,644,980
Number of extensions: 1895473
Number of successful extensions: 5960
Number of sequences better than 10.0: 13
Number of HSP's gapped: 5938
Number of HSP's successfully gapped: 15
Length of query: 906
Length of database: 15,399,855
Length adjustment: 110
Effective length of query: 796
Effective length of database: 10,995,345
Effective search space: 8752294620
Effective search space used: 8752294620
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top