ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf91d21 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os12g0434400:Os12g0434400 | 748 | 0.0 | 2 | AK058513:Os02g0794700 | 605 | e-173 | 3 | AK104150:Os02g0794700 | 560 | e-159 | 4 | AK106320:Os09g0536800 | 33 | 0.59 | 5 | Os06g0111300:Os06g0111300 | 32 | 1.7 | 6 | AK102794:Os01g0672100 | 32 | 1.7 | 7 | AK060307:Os01g0672100 | 32 | 1.7 | 8 | D38170:Os12g0555500 | 31 | 2.9 | 9 | AK071613:Os12g0555500 | 31 | 2.9 | 10 | Os03g0190300:Os03g0190300 | 31 | 3.8 | 11 | AK059493:Os08g0478000 | 31 | 3.8 | 12 | AK110081: | 30 | 5.0 | 13 | Os12g0456400:Os12g0456400 | 30 | 8.5 | 14 | AK121157:Os03g0694900 | 30 | 8.5 | 15 | AK108815:Os02g0109200 | 30 | 8.5 | 16 | AK072257:Os11g0586300 | 30 | 8.5 | 17 | Os03g0717300:Os03g0717300 | 30 | 8.5 |
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>Os12g0434400:Os12g0434400 | Length = 542 Score = 748 bits (1931), Expect = 0.0 Identities = 394/538 (73%), Positives = 439/538 (81%), Gaps = 28/538 (5%) Frame = +3 Query: 261 NAVELPQVAFTGKDIEFSDWKGDILAVAVTEKDLSKG--SDSKFENAV--LKKLDAQLSG 428 N V+ PQ++F KD++ ++W+GDILAV VTE D+SK S S+F NA L KLD +L G Sbjct: 3 NVVDPPQISFAAKDMDLTEWEGDILAVLVTETDVSKATSSSSRFTNAAAALAKLDGELGG 62 Query: 429 LLSEASAEEDFTGKAGQSVVLRLSG----QGFKRVALVGLGQSAPSTAAACRGIGESVAS 596 LLSEASAEE+F G+AGQSV LRL GFKRV LVG+G + PS+AAACR GE++A+ Sbjct: 63 LLSEASAEEEFAGRAGQSVALRLPTAPGLHGFKRVCLVGVGNNMPSSAAACRSTGETIAA 122 Query: 597 VAKSAQATSVAIVLASP--AGIQ-EGFKLNAAAAIASGTVLGLHEDSRFKAESKKVHLKQ 767 VAKSAQA S A+ LASP +Q E +LNAAAA+ASG VLGLHED R+K++SKKVHLKQ Sbjct: 123 VAKSAQARSAAVALASPPPGWVQGEDLRLNAAAAVASGVVLGLHEDRRYKSDSKKVHLKQ 182 Query: 768 VDLIGLGSGSELDQKLKYVNDLSSGVIFGKELVNAPANVLTPAVLAEEASKIASEFSDVF 947 VDLIG GSG E+ +KL+Y N +SS VIF KELVN+PANVLTPAVLAEEAS IAS +SDV Sbjct: 183 VDLIGFGSGQEMGRKLQYANHVSSAVIFAKELVNSPANVLTPAVLAEEASNIASSYSDVL 242 Query: 948 TATILDVEKCQELKMGSYLGVAAASANPPHFIHLCYKPVGGNVKRKLAIVGKGLTFDS-- 1121 TATILD EKC+ELKMGSYL VAAASANPPHFIHLCYKP GGNVKRKLAIVGKGLTFD Sbjct: 243 TATILDEEKCRELKMGSYLAVAAASANPPHFIHLCYKPPGGNVKRKLAIVGKGLTFDRFY 302 Query: 1122 ---------------GGYNIKTGPGCSIELMKFDMGGSAAVFGAAKALAQIKPPGVEVHF 1256 GGYNIK G +IELMK DMGGSAA+FGAAKAL QIKPPGVEVHF Sbjct: 303 LSLDNLLIVTKFVCIGGYNIKIGAVTTIELMKKDMGGSAALFGAAKALGQIKPPGVEVHF 362 Query: 1257 IVAACENMISGTGMRPGDILTASNGKTIEVNNTDAEGRLTLADALVYACNQGVDKIIDLA 1436 I AACENMISGTGMRPGDI+TASNGKTIEV+NTDAEGRLTLADALVYAC GVDKIIDLA Sbjct: 363 ISAACENMISGTGMRPGDIVTASNGKTIEVDNTDAEGRLTLADALVYACKLGVDKIIDLA 422 Query: 1437 TLTGACVVALGPSIAGIFTPSDELAQEVTAASELSGEKFWRLPMEESYWEQMKSGVADMV 1616 TLTG C +ALGPSIAGI TPSDEL +EV AA E SGEKFWRLP+EESYWEQMKS VADM+ Sbjct: 423 TLTGYCRIALGPSIAGILTPSDELDKEVAAAYEASGEKFWRLPLEESYWEQMKSSVADML 482 Query: 1617 NTGGRQGGSITAALFLKQFVDEKVQWMHIDMAGPVWNDKKRAATGFGVSTLVEWVLKN 1790 NTG GG+ITA LFLKQFVDEKV+WMH+DMAGPVWN KK+ ATGFGVSTLVEWVL N Sbjct: 483 NTGSPLGGAITAGLFLKQFVDEKVKWMHVDMAGPVWNYKKQEATGFGVSTLVEWVLIN 540
>AK058513:Os02g0794700 | Length = 316 Score = 605 bits (1561), Expect = e-173 Identities = 299/314 (95%), Positives = 307/314 (97%) Frame = +3 Query: 849 FGKELVNAPANVLTPAVLAEEASKIASEFSDVFTATILDVEKCQELKMGSYLGVAAASAN 1028 FGKELVN+PANVLTPAVLAEEAS IAS +SDVFTATILDVEKC+ELKMGSYLGVAAASAN Sbjct: 1 FGKELVNSPANVLTPAVLAEEASNIASTYSDVFTATILDVEKCKELKMGSYLGVAAASAN 60 Query: 1029 PPHFIHLCYKPVGGNVKRKLAIVGKGLTFDSGGYNIKTGPGCSIELMKFDMGGSAAVFGA 1208 PPHFIHLCYKP GGN KRKLAIVGKGLTFDSGGYNIKTGPGCSIELMKFDMGGSAAVFGA Sbjct: 61 PPHFIHLCYKPPGGNAKRKLAIVGKGLTFDSGGYNIKTGPGCSIELMKFDMGGSAAVFGA 120 Query: 1209 AKALAQIKPPGVEVHFIVAACENMISGTGMRPGDILTASNGKTIEVNNTDAEGRLTLADA 1388 AKAL QIKPPGVEVHFIVAACENMISGTGMRPGDI+TASNGKTIEVNNTDAEGRLTLADA Sbjct: 121 AKALGQIKPPGVEVHFIVAACENMISGTGMRPGDIVTASNGKTIEVNNTDAEGRLTLADA 180 Query: 1389 LVYACNQGVDKIIDLATLTGACVVALGPSIAGIFTPSDELAQEVTAASELSGEKFWRLPM 1568 LVYACNQGVDKIIDLATLTGACVVALGPSIAGIFTPSDELA+EV AASE+SGEKFWR+P+ Sbjct: 181 LVYACNQGVDKIIDLATLTGACVVALGPSIAGIFTPSDELAKEVAAASEISGEKFWRMPL 240 Query: 1569 EESYWEQMKSGVADMVNTGGRQGGSITAALFLKQFVDEKVQWMHIDMAGPVWNDKKRAAT 1748 EESYWE MKSGVADMVNTGGRQGGSITAALFLKQFVDEKVQWMHIDMAGPVWNDKKRAAT Sbjct: 241 EESYWESMKSGVADMVNTGGRQGGSITAALFLKQFVDEKVQWMHIDMAGPVWNDKKRAAT 300 Query: 1749 GFGVSTLVEWVLKN 1790 GFGVSTLVEWVLKN Sbjct: 301 GFGVSTLVEWVLKN 314
>AK104150:Os02g0794700 | Length = 289 Score = 560 bits (1442), Expect = e-159 Identities = 274/286 (95%), Positives = 281/286 (98%) Frame = +3 Query: 933 FSDVFTATILDVEKCQELKMGSYLGVAAASANPPHFIHLCYKPVGGNVKRKLAIVGKGLT 1112 +SDVFTATILDVEKC+ELKMGSYLGVAAASANPPHFIHLCYKP GGN KRKLAIVGKGLT Sbjct: 2 YSDVFTATILDVEKCKELKMGSYLGVAAASANPPHFIHLCYKPPGGNAKRKLAIVGKGLT 61 Query: 1113 FDSGGYNIKTGPGCSIELMKFDMGGSAAVFGAAKALAQIKPPGVEVHFIVAACENMISGT 1292 FDSGGYNIKTGPGCSIELMKFDMGGSAAVFGAAKAL QIKPPGVEVHFIVAACENMISGT Sbjct: 62 FDSGGYNIKTGPGCSIELMKFDMGGSAAVFGAAKALGQIKPPGVEVHFIVAACENMISGT 121 Query: 1293 GMRPGDILTASNGKTIEVNNTDAEGRLTLADALVYACNQGVDKIIDLATLTGACVVALGP 1472 GMRPGDI+TASNGKTIEVNNTDAEGRLTLADALVYACNQGVDKIIDLATLTGACVVALGP Sbjct: 122 GMRPGDIVTASNGKTIEVNNTDAEGRLTLADALVYACNQGVDKIIDLATLTGACVVALGP 181 Query: 1473 SIAGIFTPSDELAQEVTAASELSGEKFWRLPMEESYWEQMKSGVADMVNTGGRQGGSITA 1652 SIAGIFTPSDELA+EV AASE+SGEKFWR+P+EESYWE MKSGVADMVNTGGRQGGSITA Sbjct: 182 SIAGIFTPSDELAKEVAAASEISGEKFWRMPLEESYWESMKSGVADMVNTGGRQGGSITA 241 Query: 1653 ALFLKQFVDEKVQWMHIDMAGPVWNDKKRAATGFGVSTLVEWVLKN 1790 ALFLKQFVDEKVQWMHIDMAGPVWNDKKRAATGFGVSTLVEWVLKN Sbjct: 242 ALFLKQFVDEKVQWMHIDMAGPVWNDKKRAATGFGVSTLVEWVLKN 287
>AK106320:Os09g0536800 | Length = 491 Score = 33.5 bits (75), Expect = 0.59 Identities = 26/72 (36%), Positives = 31/72 (43%), Gaps = 3/72 (4%) Frame = +2 Query: 1547 EVLEIAHGGKLLGADEVWCG*HGQYRRSTGRFHHSCPVPETVCRREGSVDAHRHGR---P 1717 EVL GG A+E HG G H +P+ V E DAH+ R P Sbjct: 9 EVLGDGPGGD--AAEESPDAGHGDEEGDVGVAHGDAHLPQVVHHGEPRADAHQERREHEP 66 Query: 1718 GVERQEACRDRV 1753 V+R E RDRV Sbjct: 67 EVQRHERLRDRV 78
>Os06g0111300:Os06g0111300 | Length = 978 Score = 32.0 bits (71), Expect = 1.7 Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 12/141 (8%) Frame = +3 Query: 591 ASVAKSAQATSVAIVLASPAGIQEGFKLNAAAAIASGTVLGLHEDSRFKAESKKVHLKQV 770 A++A +A +T+V+I +S + +G + +++SGT R + + +H + Sbjct: 3 AAIAGAAASTAVSITCSSYSYEDDGAA--TSWSLSSGTSSSSSSSQRQRPYRRLLHDEAQ 60 Query: 771 DLI----GLGSGSEL--------DQKLKYVNDLSSGVIFGKELVNAPANVLTPAVLAEEA 914 L G GSG+ DQ +YV D +G ++G+ +V A A + + Sbjct: 61 RLRRERRGQGSGAHTPRWVRRTPDQMARYVEDDRAGHVYGRHVVAAVRAARATASCSSPS 120 Query: 915 SKIASEFSDVFTATILDVEKC 977 S E F A + E C Sbjct: 121 SADMREAMASFVAKLTFREMC 141
>AK102794:Os01g0672100 | Length = 260 Score = 32.0 bits (71), Expect = 1.7 Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 2/33 (6%) Frame = +1 Query: 1675 STRRFSGCTSTWPARCGTTR--SVPRPGSACPP 1767 STRR C STW R G TR S P S+ PP Sbjct: 2 STRRTRSCWSTWKGRRGLTRGSSTPSSTSSSPP 34
>AK060307:Os01g0672100 | Length = 260 Score = 32.0 bits (71), Expect = 1.7 Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 2/33 (6%) Frame = +1 Query: 1675 STRRFSGCTSTWPARCGTTR--SVPRPGSACPP 1767 STRR C STW R G TR S P S+ PP Sbjct: 2 STRRTRSCWSTWKGRRGLTRGSSTPSSTSSSPP 34
>D38170:Os12g0555500 | Length = 158 Score = 31.2 bits (69), Expect = 2.9 Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 4/103 (3%) Frame = +3 Query: 546 APSTAAACRGIGESVASVAKSAQATSVAIVLASPAGIQEGFKLNAAAAIASGTVLGLHED 725 A + AC G+ + +A T + L AG+ +K A A+ VL + Sbjct: 26 ASTLPKACAGLVDDIAVEGNGGPGTIYTMKLNPAAGVGSTYKTRVAVCDAASHVL---KS 82 Query: 726 SRFKAESK----KVHLKQVDLIGLGSGSELDQKLKYVNDLSSG 842 +AESK K H + L G GS + KLK +L G Sbjct: 83 DVLEAESKVGKLKSHSTETKLEATGDGSCV-AKLKVEYELEDG 124
>AK071613:Os12g0555500 | Length = 158 Score = 31.2 bits (69), Expect = 2.9 Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 4/103 (3%) Frame = +3 Query: 546 APSTAAACRGIGESVASVAKSAQATSVAIVLASPAGIQEGFKLNAAAAIASGTVLGLHED 725 A + AC G+ + +A T + L AG+ +K A A+ VL + Sbjct: 26 ASTLPKACAGLVDDIAVEGNGGPGTIYTMKLNPAAGVGSTYKTRVAVCDAASHVL---KS 82 Query: 726 SRFKAESK----KVHLKQVDLIGLGSGSELDQKLKYVNDLSSG 842 +AESK K H + L G GS + KLK +L G Sbjct: 83 DVLEAESKVGKLKSHSTETKLEATGDGSCV-AKLKVEYELEDG 124
>Os03g0190300:Os03g0190300 | Length = 624 Score = 30.8 bits (68), Expect = 3.8 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -3 Query: 1810 HDDDDDEFLRTHSTRVDTPNPVAARF 1733 HDDDDD+ R H T + P+ +F Sbjct: 322 HDDDDDDTARPHCTEIGEPSSFGGKF 347
>AK059493:Os08g0478000 | Length = 154 Score = 30.8 bits (68), Expect = 3.8 Identities = 19/54 (35%), Positives = 27/54 (50%) Frame = -3 Query: 1222 AKAFAAPNTAAEPPMSNFISSILQPGPVLML*PPLSKVSPFPTIASFLLTLPPT 1061 A A AAP A P + + L P P + P L+ V P P++ +T+PPT Sbjct: 31 AAAAAAPEAAPAQPSMPTVPTTLPPIPSIPAVPKLT-VPPMPSVPIPKVTIPPT 83
>AK110081: | Length = 1013 Score = 30.4 bits (67), Expect = 5.0 Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 3/82 (3%) Frame = +3 Query: 492 RLSGQGFKRVALVGLGQSAPSTAAACRGIGESVASVAKSAQA---TSVAIVLASPAGIQE 662 R S +G + A GLG + STA + + +S + A A + +A+V+ + +++ Sbjct: 579 RPSTRGSREAAPFGLGATGTSTAGRSGSVRSNASSSKREAAAGPSSGIALVVDTQGAVRQ 638 Query: 663 GFKLNAAAAIASGTVLGLHEDS 728 L + S VLG + S Sbjct: 639 TGALPGSGTPTSAPVLGSNSSS 660
>Os12g0456400:Os12g0456400 | Length = 1142 Score = 29.6 bits (65), Expect = 8.5 Identities = 17/50 (34%), Positives = 28/50 (56%) Frame = -3 Query: 991 IFSSWHFSTSNIVAVNTSLNSEAIFDASSASTAGVRTFAGALTSSFPKIT 842 + SS + SN +A T S A+F ++ ++ + T AG+ T SFPK + Sbjct: 765 VISSKPTTLSNGLADTTKSASAAVFPSNGSTKSVCSTNAGSSTPSFPKFS 814
>AK121157:Os03g0694900 | Length = 1054 Score = 29.6 bits (65), Expect = 8.5 Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 1/111 (0%) Frame = +3 Query: 720 EDSRFKAESKKVHLKQVDLIGLG-SGSELDQKLKYVNDLSSGVIFGKELVNAPANVLTPA 896 E+ R KA++K+ Q G SE Q+ K V D + P + + P Sbjct: 32 EEKRLKAKAKEAARLQAQAASDGPKKSEKKQRKKAVEDEN------------PEDFIDPD 79 Query: 897 VLAEEASKIASEFSDVFTATILDVEKCQELKMGSYLGVAAASANPPHFIHL 1049 + +AS+ + ++ T ++ + Y G AAS+ PP I L Sbjct: 80 TPHGQKKFLASQMAKQYSPTAVEKSWYSWWESSGYFGADAASSKPPFVIVL 130
>AK108815:Os02g0109200 | Length = 417 Score = 29.6 bits (65), Expect = 8.5 Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 9/123 (7%) Frame = +3 Query: 387 ENAVLKKLDAQLSGLLSEASAEEDFTGKAGQSVVLRLSGQGFKRVALVGLGQSAPSTAAA 566 E +++ +LS LL E + EE+ + +V+ + + + V + A + AAA Sbjct: 304 EMQAVERAARELSSLLEEVAEEEE-----EEQLVMGATDERARDVV-----ERAEALAAA 353 Query: 567 CRGIGESVASVAKSAQAT---------SVAIVLASPAGIQEGFKLNAAAAIASGTVLGLH 719 CR + E +A + + +A V ++ +AAAA ASG+ H Sbjct: 354 CRALEEGLAPLERQVRAVFHRVVASRGEVVRIMEHSTRSNSSATASAAAAAASGSGAPPH 413 Query: 720 EDS 728 S Sbjct: 414 HHS 416
>AK072257:Os11g0586300 | Length = 537 Score = 29.6 bits (65), Expect = 8.5 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 6/74 (8%) Frame = +3 Query: 1530 SELSGE----KFWRLPMEESYWEQMKSGVADMVNTGGRQGGSITAALFLKQFVDEKVQWM 1697 SE SG WR +ES W+ GV M T + G + + +Q+ W Sbjct: 319 SEKSGRDATGNVWREYWKESMWQDFTCGVMHMEKTADKWGQNGKGEQWQEQW------WE 372 Query: 1698 HIDMAGPV--WNDK 1733 H D +G W DK Sbjct: 373 HYDSSGKAEKWADK 386
>Os03g0717300:Os03g0717300 | Length = 160 Score = 29.6 bits (65), Expect = 8.5 Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 1/68 (1%) Frame = +1 Query: 1681 RRFSGCTSTW-PARCGTTRSVPRPGSACPPWWSGSSRTXXXXXRE*TSPLISIGSDNGVR 1857 RR+ C TW + ++ S PR S PPW SS + + S GS Sbjct: 17 RRWCTCWCTWWRSSSPSSASTPRSSSTTPPWRPTSSPSTPGSASSPSPSSASSGSSASSP 76 Query: 1858 DSSSAPVN 1881 S AP + Sbjct: 77 SGSRAPTS 84 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 55,930,372 Number of extensions: 1414973 Number of successful extensions: 5258 Number of sequences better than 10.0: 17 Number of HSP's gapped: 5246 Number of HSP's successfully gapped: 17 Length of query: 685 Length of database: 15,399,855 Length adjustment: 107 Effective length of query: 578 Effective length of database: 11,115,468 Effective search space: 6424740504 Effective search space used: 6424740504 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
