Clone Name | rbastl56h08 |
---|---|
Clone Library Name | barley_pub |
>CCNB3_MOUSE (Q810T2) G2/mitotic-specific cyclin-B3| Length = 1396 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -3 Query: 120 FLHNL*QCTVVLEYSVGYNISCQHCRSRKLN 28 ++ NL C LEY GY ++ H RKLN Sbjct: 1319 YMRNLSNCVPTLEYFTGYKMAELHILVRKLN 1349
>TILS_BUCBP (Q89AX3) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 438 Score = 28.9 bits (63), Expect = 3.3 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +2 Query: 8 ISQNNLKFSFRLLQC*HDIL*PTEYSKTTVHCYKLCKN 121 + +NNL F+FR + H + +E K + HC K+C N Sbjct: 34 LKKNNLNFTFRAIHINHQLHPDSE--KWSDHCKKICIN 69
>PCYOX_PONPY (Q5R748) Prenylcysteine oxidase precursor (EC 1.8.3.5)| Length = 505 Score = 28.9 bits (63), Expect = 3.3 Identities = 13/51 (25%), Positives = 26/51 (50%) Frame = -2 Query: 328 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFL 176 Q+ + L+ ++S DY + KKPW+ + P C S+ ++ ++L Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYL 457
>PCYOX_MACFA (Q95KC9) Prenylcysteine oxidase precursor (EC 1.8.3.5)| Length = 505 Score = 28.9 bits (63), Expect = 3.3 Identities = 13/51 (25%), Positives = 26/51 (50%) Frame = -2 Query: 328 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFL 176 Q+ + L+ ++S DY + KKPW+ + P C S+ ++ ++L Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYL 457
>PCYOX_HUMAN (Q9UHG3) Prenylcysteine oxidase precursor (EC 1.8.3.5) (PCL1)| Length = 505 Score = 28.9 bits (63), Expect = 3.3 Identities = 13/51 (25%), Positives = 26/51 (50%) Frame = -2 Query: 328 QQPVLSCIFLRGYMSVDYCLEERKKPWILVSRRRRPNSCWSLGMNKAFFFL 176 Q+ + L+ ++S DY + KKPW+ + P C S+ ++ ++L Sbjct: 410 QETLTKAQILKLFLSYDYAV---KKPWLAYPHYKPPEKCPSIILHDRLYYL 457
>CGS5_YEAST (P30283) S-phase entry cyclin-5| Length = 435 Score = 27.7 bits (60), Expect = 7.4 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 4/72 (5%) Frame = +1 Query: 121 LKRNNNIGGDTK----TSHLTEEEKKKPCSFPDSSKS*AAVAERPKSMASSFPPNNNQHS 288 +KRN+ I + + S+L + K+ S DSS +P+ + P NNN S Sbjct: 11 IKRNSMIYNENERQLCNSNLKILQNKRALSKNDSSSKQQVQDSKPRRALTDVPVNNNPLS 70 Query: 289 CNLAKIYSSKLA 324 N + SK A Sbjct: 71 QNKRIVAGSKAA 82
>NAD2_CAEEL (P32739) Sodium-dependent high-affinity dicarboxylate transporter 2| (Na(+)/dicarboxylate cotransporter 2) (NaDC-2) (ceNaDC2) Length = 551 Score = 27.7 bits (60), Expect = 7.4 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -1 Query: 170 VKWDVFVSPPMLLFLFSSYTI 108 ++W VF PPM ++L +SY I Sbjct: 241 LQWMVFAIPPMFVYLLASYII 261
>YKG6_CAEEL (P46556) Hypothetical protein B0285.6 in chromosome III| Length = 577 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -1 Query: 176 SSVKWDVFVSPPMLLFLFSSYTI 108 S + W F PPM+ ++FSS+ I Sbjct: 253 SYLSWMAFAIPPMIFYMFSSWFI 275 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,659,902 Number of Sequences: 219361 Number of extensions: 952219 Number of successful extensions: 2630 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2596 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2630 length of database: 80,573,946 effective HSP length: 87 effective length of database: 61,489,539 effective search space used: 1475748936 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)