>RIR1_ARATH (Q9SJ20) Ribonucleoside-diphosphate reductase large subunit (EC|
           1.17.4.1) (Ribonucleoside-diphosphate reductase R1
           subunit) (AtRNR1)
          Length = 816

 Score = 47.4 bits (111), Expect = 8e-06
 Identities = 20/29 (68%), Positives = 25/29 (86%)
 Frame = -2

Query: 358 KLAEEDDEAKMAQVVCSLNNREECLACGS 272
           ++ EED+E K+AQ+VCSL N EECLACGS
Sbjct: 788 EVEEEDNETKLAQMVCSLTNPEECLACGS 816

>RIR1_DROME (P48591) Ribonucleoside-diphosphate reductase large subunit (EC|
           1.17.4.1) (Ribonucleoside-diphosphate reductase M1
           subunit) (Ribonucleotide reductase large chain)
          Length = 812

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 16/26 (61%), Positives = 21/26 (80%)
 Frame = -2

Query: 349 EEDDEAKMAQVVCSLNNREECLACGS 272
           EED E KMA +VCSL N++ C++CGS
Sbjct: 787 EEDRERKMADMVCSLENKDACMSCGS 812

>RIR1_MOUSE (P07742) Ribonucleoside-diphosphate reductase large subunit (EC|
           1.17.4.1) (Ribonucleoside-diphosphate reductase M1
           subunit) (Ribonucleotide reductase large chain)
          Length = 792

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 17/26 (65%), Positives = 19/26 (73%)
 Frame = -2

Query: 349 EEDDEAKMAQVVCSLNNREECLACGS 272
           EE+ E   A +VCSL NREECL CGS
Sbjct: 767 EEEKERNTAAMVCSLENREECLMCGS 792

>RIR1_HUMAN (P23921) Ribonucleoside-diphosphate reductase large subunit (EC|
           1.17.4.1) (Ribonucleoside-diphosphate reductase M1
           subunit) (Ribonucleotide reductase large chain)
          Length = 792

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = -2

Query: 349 EEDDEAKMAQVVCSLNNREECLACGS 272
           EE+ E   A +VCSL NR+ECL CGS
Sbjct: 767 EEEKERNTAAMVCSLENRDECLMCGS 792

>RIR1_BRARE (P79732) Ribonucleoside-diphosphate reductase large subunit (EC|
           1.17.4.1) (Ribonucleoside-diphosphate reductase M1
           subunit) (Ribonucleotide reductase large chain)
           (Ribonucleotide reductase protein R1 class I)
          Length = 794

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 16/26 (61%), Positives = 17/26 (65%)
 Frame = -2

Query: 349 EEDDEAKMAQVVCSLNNREECLACGS 272
           EE  E   A +VCSL NR ECL CGS
Sbjct: 769 EETKERNKAAMVCSLENRHECLMCGS 794

>SODM_CANAL (O13401) Superoxide dismutase [Mn], mitochondrial precursor (EC|
           1.15.1.1)
          Length = 234

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = +1

Query: 103 ATQPSRAAQQRNSSVLKHNRTYINDSLLALFNAN-DQTVWLCNAALVKRKIDATDPSNFR 279
           AT+P  + Q       KH++TY+N+      NA+ +Q V   +   VK+ +      NF 
Sbjct: 47  ATEPYISGQINEIHYTKHHQTYVNN-----LNASIEQAVEAKSKGEVKKLVALEKAINFN 101

Query: 280 MPGTLPGCSRSRQLAP 327
             G L  C   + LAP
Sbjct: 102 GGGYLNHCLWWKNLAP 117

>NU160_HUMAN (Q12769) Nuclear pore complex protein Nup160 (Nucleoporin Nup160)|
           (160 kDa nucleoporin)
          Length = 1316

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 247 KIDATDPSNFRMPGTLPGCSRSRQLAPFWL 336
           K+D TDP N+++   +PG S +   +  WL
Sbjct: 158 KVDFTDPCNYQLIPAVPGISPNSTASTAWL 187

>ARGJ1_ANASP (Q8YVA8) Arginine biosynthesis bifunctional protein argJ 1|
           [Includes: Glutamate N-acetyltransferase (EC 2.3.1.35)
           (Ornithine acetyltransferase) (Ornithine transacetylase)
           (OATase); Amino-acid acetyltransferase (EC 2.3.1.1)
           (N-acetylglutamate
          Length = 413

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 115 SRAAQQRNSSVLKHNRTYINDSLLALFNANDQTVWLCNAALVKRKIDA 258
           +RAA +  +S+     T  NDSL+AL N   +T  +        K++A
Sbjct: 212 TRAADRSFNSITVDGDTSTNDSLIALANGQSRTPAITEVGAESEKLEA 259

>AHM2_ARATH (O64474) Putative cadmium/zinc-transporting ATPase 2 (EC 3.6.3.3)|
           (EC 3.6.3.5)
          Length = 1172

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 263 IRLTSACQALFPVVQGADNLRHFGFIVLL 349
           I L SAC A+ PV+    NL+H+  + L+
Sbjct: 323 IILVSACVAIVPVIMKVHNLKHWFHLALV 351

>YMM1_CAEEL (P34489) Hypothetical protein K01B6.1|
          Length = 732

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +1

Query: 61  QPMFLDSTNNKPTLATQPSRAAQQRNSSVLKHNRTYINDSLLAL 192
           +PM   S+   PT  TQP R   Q +S   + N    ND L  L
Sbjct: 234 RPMQGRSSPKSPTSPTQPGRRGSQASSLPSRRNTVSQNDLLATL 277

>HBBC_TRENE (P45721) Hemoglobin beta-C subunit (Hemoglobin beta-C chain)|
           (Beta-C-globin)
          Length = 146

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +1

Query: 121 AAQQRNSSVLKHNRTYINDSLLALFNANDQTVWLCNAALVKRKIDATDPSNFRM 282
           AA  +N+ V KH  T +N    A+ N +D T      +++  +    DP NF++
Sbjct: 52  AAIAQNAMVSKHGTTILNGLDRAVKNMDDITNTYAELSVLHSEKLHVDPDNFKL 105


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,919,220
Number of Sequences: 219361
Number of extensions: 1011017
Number of successful extensions: 2254
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2254
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)