>gb|AY484588.1| Musa acuminata clone MuG9, genomic sequence
          Length = 73268

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                        
Query: 270  taacttccgcatgccaggcactcttcccggttgttcaaggagcagacaacttgcgccatt 329
            |||||||| ||||||| ||||||||| ||||| | |||||| || ||||| || ||||||
Sbjct: 9500 taacttccacatgccatgcactcttcacggttttccaaggaacaaacaacctgtgccatt 9559

                    
Query: 330  ttggcttc 337
            ||||||||
Sbjct: 9560 ttggcttc 9567

>ref|XM_550374.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3103

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 67/79 (84%)
 Strand = Plus / Minus

                                                                        
Query: 268  tctaacttccgcatgccaggcactcttcccggttgttcaaggagcagacaacttgcgcca 327
            |||||||||| || |||| |||||| ||||||||||||||||| || || | ||| ||||
Sbjct: 2705 tctaacttccacacgccaagcactcctcccggttgttcaaggaacaaaccatttgagcca 2646

                               
Query: 328  ttttggcttcatcgtcctc 346
            |||| |||||  |||||||
Sbjct: 2645 ttttagcttccacgtcctc 2627

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                           
Query: 268     tctaacttccgcatgccaggcactcttcccggttgttcaaggagcagacaacttgcgcca 327
               |||||||||| || |||| |||||| ||||||||||||||||| || || | ||| ||||
Sbjct: 3449091 tctaacttccacacgccaagcactcctcccggttgttcaaggaacaaaccatttgagcca 3449150

                                  
Query: 328     ttttggcttcatcgtcctc 346
               |||| |||||  |||||||
Sbjct: 3449151 ttttagcttccacgtcctc 3449169

>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0033B09
          Length = 143545

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                         
Query: 268   tctaacttccgcatgccaggcactcttcccggttgttcaaggagcagacaacttgcgcca 327
             |||||||||| || |||| |||||| ||||||||||||||||| || || | ||| ||||
Sbjct: 65795 tctaacttccacacgccaagcactcctcccggttgttcaaggaacaaaccatttgagcca 65854

                                
Query: 328   ttttggcttcatcgtcctc 346
             |||| |||||  |||||||
Sbjct: 65855 ttttagcttccacgtcctc 65873

>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone
              P0680A03
          Length = 156054

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                          
Query: 268    tctaacttccgcatgccaggcactcttcccggttgttcaaggagcagacaacttgcgcca 327
              |||||||||| || |||| |||||| ||||||||||||||||| || || | ||| ||||
Sbjct: 140645 tctaacttccacacgccaagcactcctcccggttgttcaaggaacaaaccatttgagcca 140704

                                 
Query: 328    ttttggcttcatcgtcctc 346
              |||| |||||  |||||||
Sbjct: 140705 ttttagcttccacgtcctc 140723

>dbj|AK068858.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169B12, full
            insert sequence
          Length = 3104

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 67/79 (84%)
 Strand = Plus / Minus

                                                                        
Query: 268  tctaacttccgcatgccaggcactcttcccggttgttcaaggagcagacaacttgcgcca 327
            |||||||||| || |||| |||||| ||||||||||||||||| || || | ||| ||||
Sbjct: 2705 tctaacttccacacgccaagcactcctcccggttgttcaaggaacaaaccatttgagcca 2646

                               
Query: 328  ttttggcttcatcgtcctc 346
            |||| |||||  |||||||
Sbjct: 2645 ttttagcttccacgtcctc 2627

>gb|AY105931.1| Zea mays PCO081802 mRNA sequence
          Length = 1120

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 268 tctaacttccgcatgccaggcactcttcccggttgttcaaggagcagac 316
           |||| ||||| || |||||||||||||||||||||||||| || |||||
Sbjct: 755 tctagcttccacacgccaggcactcttcccggttgttcaaagaacagac 707

>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 94     ccaacattggcaactcagccat 115
              ||||||||||||||||||||||
Sbjct: 442330 ccaacattggcaactcagccat 442309

>ref|XM_468281.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2433

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 269  ctaacttccgcatgccaggcactcttcccggttgttcaagga 310
            |||||| || ||||||| ||| || |||||||||||||||||
Sbjct: 2433 ctaactaccacatgccaagcattcgtcccggttgttcaagga 2392

>gb|AC069158.6| Genomic Sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0049O12, from chromosome 2, complete sequence
          Length = 155154

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                        
Query: 269    ctaacttccgcatgccaggcactcttcccggttgttcaagga 310
              |||||| || ||||||| ||| || |||||||||||||||||
Sbjct: 153798 ctaactaccacatgccaagcattcgtcccggttgttcaagga 153839

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 269      ctaacttccgcatgccaggcactcttcccggttgttcaagga 310
                |||||| || ||||||| ||| || |||||||||||||||||
Sbjct: 34351308 ctaactaccacatgccaagcattcgtcccggttgttcaagga 34351267

>dbj|AP004240.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1548_F12
          Length = 118814

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 269   ctaacttccgcatgccaggcactcttcccggttgttcaagga 310
             |||||| || ||||||| ||| || |||||||||||||||||
Sbjct: 48955 ctaactaccacatgccaagcattcgtcccggttgttcaagga 48914

>gb|AC113302.13| Mus musculus chromosome 5, clone RP23-431M7, complete sequence
          Length = 201427

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 1     aacagcaacaacaagacaaatcaat 25
             ||||||||||| |||||||||||||
Sbjct: 23322 aacagcaacaagaagacaaatcaat 23346

>ref|XM_657547.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5035.2), mRNA
          Length = 1443

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 330 ttggcttcatcgtcctcctct 350
           |||||||||||||||||||||
Sbjct: 872 ttggcttcatcgtcctcctct 892

>gb|AC023480.7| Homo sapiens chromosome 3 clone RP11-399K19 map 3p, complete sequence
          Length = 199814

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 241   aagagaaaaatagatgcaaca 261
             |||||||||||||||||||||
Sbjct: 46858 aagagaaaaatagatgcaaca 46878

>gb|AC124189.3| Mus musculus BAC clone RP23-254C8 from 5, complete sequence
          Length = 150507

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 1     aacagcaacaacaagacaaatcaat 25
             ||||||||||| |||||||||||||
Sbjct: 42762 aacagcaacaagaagacaaatcaat 42738

>gb|AC016146.18| Homo sapiens 3 BAC RP11-327M20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 190456

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 241    aagagaaaaatagatgcaaca 261
              |||||||||||||||||||||
Sbjct: 126272 aagagaaaaatagatgcaaca 126292

>gb|AC018503.6|AC018503 Homo sapiens chromosome 3 clone RP11-41L18 map 3p, complete sequence
          Length = 191161

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 241    aagagaaaaatagatgcaaca 261
              |||||||||||||||||||||
Sbjct: 136941 aagagaaaaatagatgcaaca 136921

>gb|AC116691.12| Mus musculus chromosome 1, clone RP24-312I13, complete sequence
          Length = 154587

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 36    atgatacatatatatacagct 56
             |||||||||||||||||||||
Sbjct: 27638 atgatacatatatatacagct 27618

>gb|AC101854.8| Mus musculus chromosome 1, clone RP23-298H18, complete sequence
          Length = 190474

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    aaatcaataacacaaacaat 37
             ||||||||||||||||||||
Sbjct: 87360 aaatcaataacacaaacaat 87379

>ref|XM_800388.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein
           (MASP) (Tc00.1047053510917.9) partial mRNA
          Length = 822

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 334 cttcatcgtcctcctctgct 353
           ||||||||||||||||||||
Sbjct: 421 cttcatcgtcctcctctgct 402

>ref|XM_803552.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein
           (MASP) (Tc00.1047053508013.110) partial mRNA
          Length = 816

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 334 cttcatcgtcctcctctgct 353
           ||||||||||||||||||||
Sbjct: 421 cttcatcgtcctcctctgct 402

>ref|XM_816306.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein
           (MASP) (Tc00.1047053511173.64) partial mRNA
          Length = 816

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 334 cttcatcgtcctcctctgct 353
           ||||||||||||||||||||
Sbjct: 415 cttcatcgtcctcctctgct 396

>gb|AC122798.3| Mus musculus BAC clone RP23-301A3 from 2, complete sequence
          Length = 206324

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 13    aagacaaatcaataacacaaacaa 36
             |||||||| |||||||||||||||
Sbjct: 65763 aagacaaaacaataacacaaacaa 65740

>emb|AL445245.12| Human DNA sequence from clone RP4-690O18 on chromosome 1, complete
             sequence
          Length = 51112

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    acatatatatacagctgcag 60
             ||||||||||||||||||||
Sbjct: 41627 acatatatatacagctgcag 41608

>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 193     ttcaatgccaatgatcagaccgtt 216
               ||||||||||||| ||||||||||
Sbjct: 2170655 ttcaatgccaatggtcagaccgtt 2170678

>emb|AL672192.6| Zebrafish DNA sequence from clone BUSM1-87I4 Contains part of a gene
             for a novel glutaminase, part of a gene similar to STAT1
             (signal transducer and activator of transcription) and two
             CpG islands, complete sequence
          Length = 90875

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    tgatacatatatatacagct 56
             ||||||||||||||||||||
Sbjct: 43277 tgatacatatatatacagct 43296

>gb|AC034259.7| Homo sapiens chromosome 11, clone RP11-138N3, complete sequence
          Length = 206192

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 378   gtgccattagcatccccatt 397
             ||||||||||||||||||||
Sbjct: 71361 gtgccattagcatccccatt 71342

>gb|AC104462.1| Homo sapiens chromosome 1 clone RP11-522M21, complete sequence
          Length = 183271

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     caatgatacatatatataca 53
              ||||||||||||||||||||
Sbjct: 118365 caatgatacatatatataca 118384

>emb|AL592562.18| Zebrafish DNA sequence from clone XX-85C7 in linkage group 19, complete
             sequence
          Length = 94129

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    tgatacatatatatacagct 56
             ||||||||||||||||||||
Sbjct: 50658 tgatacatatatatacagct 50677

>emb|BX547938.9| Zebrafish DNA sequence from clone DKEY-85K8 in linkage group 5,
             complete sequence
          Length = 162785

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   ttaagagaaaaatagatgca 258
             ||||||||||||||||||||
Sbjct: 36686 ttaagagaaaaatagatgca 36667

>emb|BX649377.8| Zebrafish DNA sequence from clone CH211-196J1 in linkage group 19,
             complete sequence
          Length = 217898

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    tgatacatatatatacagct 56
             ||||||||||||||||||||
Sbjct: 80612 tgatacatatatatacagct 80631

>gb|AC004923.2| Homo sapiens PAC clone RP5-901A4 from 11, complete sequence
          Length = 94851

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 378   gtgccattagcatccccatt 397
             ||||||||||||||||||||
Sbjct: 16552 gtgccattagcatccccatt 16533

>emb|BX255877.14| Zebrafish DNA sequence from clone CH211-254C9, complete sequence
          Length = 152976

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 32   aacaatgatacatatatata 51
            ||||||||||||||||||||
Sbjct: 4490 aacaatgatacatatatata 4509

>gb|AC115078.11| Mus musculus chromosome 3, clone RP24-457B22, complete sequence
          Length = 179789

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      aacagcaacaacaagacaaa 20
              ||||||||||||||||||||
Sbjct: 117646 aacagcaacaacaagacaaa 117627

>emb|AL928607.8| Mouse DNA sequence from clone RP23-326J18 on chromosome 2, complete
             sequence
          Length = 128293

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 13    aagacaaatcaataacacaaacaa 36
             |||||||| |||||||||||||||
Sbjct: 14235 aagacaaaacaataacacaaacaa 14258

>emb|AL137634.1|HSM802401 Homo sapiens mRNA; cDNA DKFZp434E145 (from clone DKFZp434E145)
          Length = 5317

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 378  gtgccattagcatccccatt 397
            ||||||||||||||||||||
Sbjct: 1090 gtgccattagcatccccatt 1071


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,904,750
Number of Sequences: 3902068
Number of extensions: 4904750
Number of successful extensions: 124755
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124580
Number of HSP's gapped (non-prelim): 175
length of query: 410
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 388
effective length of database: 17,147,199,772
effective search space: 6653113511536
effective search space used: 6653113511536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)