ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl56g05 |
|---|---|
| Clone Library Name | barley_pub |
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 76.6 bits (187), Expect = 1e-14 Identities = 36/42 (85%), Positives = 37/42 (88%) Frame = -2 Query: 358 ALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 ALKNRNGPVKMPYMLLYPNTSD EK GLTAMGIPNS+SI Sbjct: 836 ALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSISI 877
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 67.0 bits (162), Expect = 1e-11 Identities = 33/43 (76%), Positives = 34/43 (79%) Frame = -2 Query: 361 PALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 P LKNRNGP K PYMLLYPNTSD G A GLTA GIPNS+SI Sbjct: 821 PELKNRNGPAKFPYMLLYPNTSDHKG-AAAGLTAKGIPNSISI 862
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 63.2 bits (152), Expect = 2e-10 Identities = 30/41 (73%), Positives = 33/41 (80%) Frame = -2 Query: 355 LKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 LKNRNGP + PYMLLYPNTSD G A G+TA GIPNS+SI Sbjct: 827 LKNRNGPAEFPYMLLYPNTSDVTG-AAAGITAKGIPNSISI 866
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 56.6 bits (135), Expect = 1e-08 Identities = 28/43 (65%), Positives = 31/43 (72%) Frame = -2 Query: 361 PALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 P KNR GP PY LLYPNTSD G+ A GL+A GIPNS+SI Sbjct: 829 PHRKNRVGPTNFPYTLLYPNTSDLKGD-AAGLSARGIPNSISI 870
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 55.5 bits (132), Expect = 3e-08 Identities = 27/43 (62%), Positives = 31/43 (72%) Frame = -2 Query: 361 PALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 P LKNR GP PY L++PNTSD G A G+TA GIPNS+SI Sbjct: 822 PLLKNRVGPANFPYTLMFPNTSDNKG-AAEGITARGIPNSISI 863
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 49.3 bits (116), Expect = 2e-06 Identities = 24/42 (57%), Positives = 30/42 (71%) Frame = -2 Query: 358 ALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 +L+NR GPVKMPY LLYP++ + GLT GIPNS+SI Sbjct: 832 SLRNRYGPVKMPYTLLYPSSEE-------GLTCRGIPNSISI 866
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 47.8 bits (112), Expect = 7e-06 Identities = 24/42 (57%), Positives = 28/42 (66%) Frame = -2 Query: 358 ALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 +L+NRNGPVKMPY +L P D GLT GIPNS+SI Sbjct: 827 SLRNRNGPVKMPYTVLLPTCEDE------GLTFRGIPNSISI 862
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 47.8 bits (112), Expect = 7e-06 Identities = 23/41 (56%), Positives = 30/41 (73%) Frame = -2 Query: 355 LKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 L+NR+GPV+MPY LLYP++ + GLT GIPNS+SI Sbjct: 828 LRNRHGPVEMPYTLLYPSSKE-------GLTFRGIPNSISI 861
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 46.6 bits (109), Expect = 1e-05 Identities = 23/41 (56%), Positives = 28/41 (68%) Frame = -2 Query: 355 LKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 L+NR GP KMPY LLYP++ + GLT GIPNS+SI Sbjct: 820 LRNRYGPAKMPYTLLYPSSEE-------GLTFRGIPNSISI 853
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 44.7 bits (104), Expect = 6e-05 Identities = 22/40 (55%), Positives = 27/40 (67%) Frame = -2 Query: 352 KNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 KNR+GPV +PY LL+P + + GLT GIPNSVSI Sbjct: 827 KNRSGPVNVPYTLLFPTSEE-------GLTGKGIPNSVSI 859
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 44.3 bits (103), Expect = 7e-05 Identities = 22/42 (52%), Positives = 28/42 (66%) Frame = -2 Query: 358 ALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 +L NR GPV++PY LL+PN+ GLT GIPNS+SI Sbjct: 832 SLSNRLGPVQLPYTLLHPNSE--------GLTCRGIPNSISI 865
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 43.9 bits (102), Expect = 1e-04 Identities = 21/43 (48%), Positives = 30/43 (69%) Frame = -2 Query: 361 PALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 P+L+NR GPV++PY LL+ ++ + GLT GIPNS+SI Sbjct: 829 PSLRNRTGPVQLPYTLLHRSSEE-------GLTFKGIPNSISI 864
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 43.5 bits (101), Expect = 1e-04 Identities = 23/41 (56%), Positives = 27/41 (65%) Frame = -2 Query: 355 LKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 LKNR G VKMPY LL+P++ G+T GIPNSVSI Sbjct: 826 LKNRTGLVKMPYTLLFPSSEG-------GVTGRGIPNSVSI 859
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 43.1 bits (100), Expect = 2e-04 Identities = 23/44 (52%), Positives = 31/44 (70%), Gaps = 1/44 (2%) Frame = -2 Query: 361 PALK-NRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 P+L+ NR GPV++PY LLYP++ + GLT GIPNS+SI Sbjct: 803 PSLQGNRLGPVQLPYTLLYPSSEE-------GLTFRGIPNSISI 839
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 43.1 bits (100), Expect = 2e-04 Identities = 22/41 (53%), Positives = 28/41 (68%) Frame = -2 Query: 355 LKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 L+NR GPV+MPY LL P++ + GLT GIPNS+SI Sbjct: 824 LRNRCGPVQMPYTLLLPSSKE-------GLTFRGIPNSISI 857
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/43 (48%), Positives = 30/43 (69%) Frame = -2 Query: 361 PALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 P+L +R GPV++PY LL+P++ + GLT GIPNS+SI Sbjct: 829 PSLYHRVGPVQLPYTLLHPSSKE-------GLTFRGIPNSISI 864
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 42.0 bits (97), Expect = 4e-04 Identities = 22/41 (53%), Positives = 25/41 (60%) Frame = -2 Query: 355 LKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 L NR+GPV PY LL+P + GLT GIPNSVSI Sbjct: 828 LTNRSGPVNAPYTLLFPTSEG-------GLTGKGIPNSVSI 861
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 41.6 bits (96), Expect = 5e-04 Identities = 22/41 (53%), Positives = 24/41 (58%) Frame = -2 Query: 355 LKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 L NR GPV PY LL+P + GLT GIPNSVSI Sbjct: 827 LTNRTGPVNAPYTLLFPTSEG-------GLTGKGIPNSVSI 860
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 36.6 bits (83), Expect = 0.015 Identities = 18/35 (51%), Positives = 22/35 (62%) Frame = -2 Query: 355 LKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGI 251 L+NR GP KMPY LLYP++ + GLT GI Sbjct: 714 LRNRTGPAKMPYTLLYPSSEE-------GLTFRGI 741
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 34.7 bits (78), Expect = 0.059 Identities = 22/41 (53%), Positives = 25/41 (60%) Frame = -2 Query: 355 LKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 LKNR G +PY L+ P SDA G+T MGIPNS SI Sbjct: 908 LKNRCGAGILPYQLMKP-FSDA------GVTGMGIPNSTSI 941
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 33.9 bits (76), Expect = 0.10 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 3/46 (6%) Frame = -2 Query: 361 PALKNRNGPVKMPYMLLYP---NTSDANGEKALGLTAMGIPNSVSI 233 P KNR+G +PY+LL P + +D + + MGIPNS+SI Sbjct: 891 PDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMGIPNSISI 936
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 33.5 bits (75), Expect = 0.13 Identities = 19/41 (46%), Positives = 23/41 (56%) Frame = -2 Query: 355 LKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 LKNR G +PY L+ P + G+T MGIPNS SI Sbjct: 891 LKNRCGAGILPYQLMKPFSDS-------GVTGMGIPNSTSI 924
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 32.3 bits (72), Expect = 0.29 Identities = 18/40 (45%), Positives = 25/40 (62%) Frame = -2 Query: 352 KNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 +NR+G +PY+LL P + N A + MGIPNS+SI Sbjct: 895 RNRHGAGVVPYVLLRP--LNGNPMDAKTVMEMGIPNSISI 932
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 32.0 bits (71), Expect = 0.38 Identities = 16/43 (37%), Positives = 25/43 (58%) Frame = -2 Query: 361 PALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 P+ +NR G +PY L+ P++ G+T G+PNSV+I Sbjct: 864 PSRRNRCGAGVLPYELMAPSSGP-------GITCRGVPNSVTI 899
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 31.6 bits (70), Expect = 0.50 Identities = 17/40 (42%), Positives = 23/40 (57%) Frame = -2 Query: 352 KNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 KNR G +PY LL P++ G+T G+PNS+SI Sbjct: 886 KNRCGAGVLPYELLAPSSPP-------GVTCRGVPNSISI 918
>ATF2_MOUSE (P16951) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) (cAMP response element-binding protein CRE-BP1) (MXBP protein) Length = 487 Score = 31.6 bits (70), Expect = 0.50 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 10/101 (9%) Frame = +3 Query: 36 HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*K------VTQ----YTLRDTNRSMTS 185 H P + ++ ++ P IPG PQP +S+ K +TQ T DT + S Sbjct: 223 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS 282 Query: 186 GRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLASDVLG 308 G T+ + RP S Q SP+ +P + G Sbjct: 283 GLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQNTSG 323
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 31.2 bits (69), Expect = 0.65 Identities = 19/43 (44%), Positives = 23/43 (53%) Frame = -2 Query: 361 PALKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 P KNR G +PY LL P + G+T GIPNS+SI Sbjct: 861 PENKNRCGAGIVPYELLKPFSEP-------GVTGRGIPNSISI 896
>ATF2_HUMAN (P15336) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) (cAMP response element-binding protein CRE-BP1) (HB16) Length = 487 Score = 31.2 bits (69), Expect = 0.65 Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 10/101 (9%) Frame = +3 Query: 36 HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*K------VTQ----YTLRDTNRSMTS 185 H P + ++ ++ P IPG PQP +S+ K +TQ T DT + S Sbjct: 223 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS 282 Query: 186 GRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLASDVLG 308 G T+ + RP S Q SP+ +P G Sbjct: 283 GLVRTQSEESRPQSLQQPATSTTETPASPAHTTPQTQSTSG 323
>ATF2_CHICK (O93602) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) Length = 487 Score = 31.2 bits (69), Expect = 0.65 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 10/90 (11%) Frame = +3 Query: 36 HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*KV----------TQYTLRDTNRSMTS 185 H P + ++ ++ P IPG PQP +S+ K+ Q T DT + S Sbjct: 223 HVPAAVPLVRPVTMVPSIPGIPGPSSPQPVQSEAKLRLKAALTQQHPQVTNGDTAKGHPS 282 Query: 186 GRTTTERRKQRPCSAQMETLLGMPMAVSPS 275 G T+ + RP S Q SP+ Sbjct: 283 GLVRTQSEEPRPQSLQQPATSTTETPASPA 312
>GATA6_HUMAN (Q92908) Transcription factor GATA-6 (GATA-binding factor 6)| Length = 449 Score = 30.8 bits (68), Expect = 0.85 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Frame = +2 Query: 38 LSSPYQHHLRHNHHFPSSTNPW---QLITATTQKPMKSNTIH 154 L+ Y HH H+HH PS +P+ L A P ++ +H Sbjct: 173 LNGTYHHHHHHHHHHPSPYSPYVGAPLTPAWPAGPFETPVLH 214
>ATF2_RAT (Q00969) Cyclic AMP-dependent transcription factor ATF-2| (Activating transcription factor 2) (cAMP response element-binding protein CRE-BP1) Length = 487 Score = 29.6 bits (65), Expect = 1.9 Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 10/101 (9%) Frame = +3 Query: 36 HCPHPINIIYDTIIIFHHPLIPGN*LPQPPRSQ*K------VTQ----YTLRDTNRSMTS 185 H P + ++ ++ P IPG PQP +S+ K +TQ T DT + S Sbjct: 223 HVPAAVPLVRPVTMVPSVPGIPGPSSPQPVQSEAKMRLKAALTQQHPPVTNGDTVKGHGS 282 Query: 186 GRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLASDVLG 308 G + + RP S Q SP+ +P + G Sbjct: 283 GLVRAQSEESRPQSLQQPATSTTETPASPAHTTPQTQNTSG 323
>HXA1_MOUSE (P09022) Homeobox protein Hox-A1 (Hox-1.6) (Homeotic protein| ERA-1-993) (Early retinoic acid 1) (Homeoboxless protein ERA-1-399) Length = 331 Score = 29.3 bits (64), Expect = 2.5 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = +2 Query: 38 LSSPYQHHLRHNHHFPSS 91 +SSP+ HH H+HH P + Sbjct: 56 ISSPHHHHHHHHHHHPQT 73
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 29.3 bits (64), Expect = 2.5 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = -2 Query: 355 LKNRNGPVKMPYMLLYPNTSDANGEKALGLTAMGIPNSVSI 233 LKNR G + Y LL P + G+T MG+P S+SI Sbjct: 863 LKNRAGAGVVKYELLKPTSEH-------GVTGMGVPYSISI 896
>YF1M_CAEEL (Q21874) Hypothetical protein R09E10.5 precursor| Length = 1459 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +3 Query: 255 PMAVSPSAFSPLASDVLGYSSM*GIFT 335 PM + P FSP+ SDV G M G+ T Sbjct: 1431 PMTLEPRGFSPVPSDVRGSQGMLGLNT 1457
>C18AA_PAEPP (Q45358) Parasporal crystal protein cry18Aa (Parasporal| delta-endotoxin CryXVIIIA(a)) (Crystaline parasporal protoxin) (79 kDa crystal protein) Length = 706 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +2 Query: 131 PMKSNTIHLARHEPIHDQRTDDYRKKETKTM 223 P+ +NTI PI+ RTD +RKK T+ + Sbjct: 74 PIDNNTICSTDFTPINVMRTDPFRKKSTQEL 104
>AHC1_YEAST (Q12433) Protein AHC1 (ADA HAT complex component 1)| Length = 566 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 8/44 (18%) Frame = +2 Query: 38 LSSPYQHHLRHNHHFPSS--------TNPWQLITATTQKPMKSN 145 + SP Q L+H HH P+S TN +Q+ T + + +++N Sbjct: 1 MMSPAQDKLQHQHHNPNSSSSSSSKMTNVYQVTTPKSPQDLENN 44
>DDLA_SHIFL (P0A6K0) D-alanine--D-alanine ligase A (EC 6.3.2.4)| (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A) Length = 364 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +3 Query: 141 VTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPMAVSPS 275 VT+ LRD ++ T T + A++E+ LG+P+ V P+ Sbjct: 143 VTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFVKPA 187
>DDLA_ECOLI (P0A6J8) D-alanine--D-alanine ligase A (EC 6.3.2.4)| (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A) Length = 364 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +3 Query: 141 VTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPMAVSPS 275 VT+ LRD ++ T T + A++E+ LG+P+ V P+ Sbjct: 143 VTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFVKPA 187
>DDLA_ECOL6 (Q8FKE3) D-alanine--D-alanine ligase A (EC 6.3.2.4)| (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A) Length = 364 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +3 Query: 141 VTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPMAVSPS 275 VT+ LRD ++ T T + A++E+ LG+P+ V P+ Sbjct: 143 VTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFVKPA 187
>DDLA_ECO57 (P0A6J9) D-alanine--D-alanine ligase A (EC 6.3.2.4)| (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A) Length = 364 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +3 Query: 141 VTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPMAVSPS 275 VT+ LRD ++ T T + A++E+ LG+P+ V P+ Sbjct: 143 VTKRLLRDAGLNIAPFITLTRANRHNISFAEVESKLGLPLFVKPA 187
>YO25_CAEEL (P34675) Hypothetical protein ZK688.5| Length = 1620 Score = 27.7 bits (60), Expect = 7.2 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 2/73 (2%) Frame = +3 Query: 90 PLIPGN*LPQPPRSQ*KVTQYTLRDTNRSMTSGRTTTERRKQRPCS--AQMETLLGMPMA 263 P +P LP P Q + TS R TT R +P + A+ ETL P+A Sbjct: 628 PSVPVETLPPPGSDQ------------QPGTSRRFTTHRFNVQPDARGAETETLAPFPVA 675 Query: 264 VSPSAFSPLASDV 302 + P+ +A ++ Sbjct: 676 IEPNELQRIAKNI 688
>VGLM_EBV (P03215) Glycoprotein M| Length = 405 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/50 (34%), Positives = 23/50 (46%) Frame = +3 Query: 111 LPQPPRSQ*KVTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPM 260 L PR + T R+ RS TS ++ R+QRP S Q +PM Sbjct: 346 LESEPRPRPSRTPSPGRNRRRSSTSSSSSRSTRRQRPVSTQALVSSVLPM 395
>FOXGB_CHICK (Q90964) Forkhead box protein G1B (Forkhead-related protein FKHL1)| (Transcription factor BF-1) (Brain factor 1) (BF1) (CBF-1) (Proto-oncogene C-QIN) (N-62-5) (CEQ 3-1) Length = 451 Score = 27.7 bits (60), Expect = 7.2 Identities = 11/38 (28%), Positives = 17/38 (44%) Frame = +2 Query: 29 HASLSSPYQHHLRHNHHFPSSTNPWQLITATTQKPMKS 142 H + P+ HH H+HH P P + A + K+ Sbjct: 38 HHNSHHPHHHHHHHHHHPPPPQQPQRAAAAEEEDEEKA 75
>GDS1_YEAST (P41913) Protein GDS1| Length = 522 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/53 (30%), Positives = 24/53 (45%) Frame = +3 Query: 138 KVTQYTLRDTNRSMTSGRTTTERRKQRPCSAQMETLLGMPMAVSPSAFSPLAS 296 K Y DTN SMT + T + + +Q ++L P S ++ S AS Sbjct: 325 KKRNYMDEDTNESMTEPKKTKTTKPGKQTKSQSLSVLSTPKKGSSASLSTFAS 377
>HIPK4_RAT (Q4V793) Homeodomain-interacting protein kinase 4 (EC 2.7.11.1)| Length = 616 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +2 Query: 23 LIHASLSSPYQHHLRHNHHFPSSTNPWQL 109 L+HA+ + HH + P +TNPWQL Sbjct: 238 LLHAARKA---HHFFKRNPHPDATNPWQL 263
>QIN_AVIS3 (P56260) Transforming protein Qin (Oncogene Qin)| Length = 387 Score = 27.7 bits (60), Expect = 7.2 Identities = 11/38 (28%), Positives = 17/38 (44%) Frame = +2 Query: 29 HASLSSPYQHHLRHNHHFPSSTNPWQLITATTQKPMKS 142 H + P+ HH H+HH P P + A + K+ Sbjct: 38 HHNSHHPHHHHHHHHHHPPPPQQPQRAAAAEEEDEEKA 75
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 24.6 bits (52), Expect(2) = 8.1 Identities = 10/36 (27%), Positives = 19/36 (52%) Frame = +2 Query: 17 RVLIHASLSSPYQHHLRHNHHFPSSTNPWQLITATT 124 R+ + ++ ++ HH +H+HH P + T TT Sbjct: 10 RLSLPSTTTTRDHHHQQHHHHPPPPPSRTHFTTITT 45 Score = 21.2 bits (43), Expect(2) = 8.1 Identities = 11/41 (26%), Positives = 16/41 (39%) Frame = +1 Query: 100 LATNYRNHPEANEK*HNTPCETRTDP*PADGRLPKEGNKDH 222 L ++ HP + H+ P R P D P +DH Sbjct: 65 LFLSFPPHPPRPPQDHHRPTPARDHRDPRDHLPPTRTRRDH 105
>SORL_CHICK (Q98930) Sortilin-related receptor (Sorting protein-related| receptor containing LDLR class A repeats) (SorLA) (SorLA-1) (Low-density lipoprotein receptor relative with 11 ligand-binding repeats) (LDLR relative with 11 ligand-binding repeats) ( Length = 1592 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 4/39 (10%) Frame = +2 Query: 137 KSNTIHLARHEPIHD----QRTDDYRKKETKTMLSSDGD 241 K NT+++ RHEP + TD ++ +E K ++ D D Sbjct: 167 KPNTVYIERHEPSGTSTVIRSTDFFQSRENKEVILEDVD 205
>GLTL2_MOUSE (Q9D2N8) Polypeptide N-acetylgalactosaminyltransferase-like protein| 2 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase-like protein 2) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase-like protein 2) (Polypeptide GalNAc tra Length = 638 Score = 27.3 bits (59), Expect = 9.4 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%) Frame = -2 Query: 211 FLLSVVVRPLVMDRF-VSRKVYCVTFHWLL 125 F LS V +P +R + R++ C TFHW L Sbjct: 459 FTLSKVAKPDCTERLKLQRRLGCRTFHWFL 488 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,661,302 Number of Sequences: 219361 Number of extensions: 837718 Number of successful extensions: 2753 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 2500 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2690 length of database: 80,573,946 effective HSP length: 96 effective length of database: 59,515,290 effective search space used: 1428366960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
