Clone Name | rbastl56g03 |
---|---|
Clone Library Name | barley_pub |
>YL392_YEAST (P18634) Hypothetical 59.8 kDa protein in SSR1-ATP10 intergenic| region Length = 518 Score = 29.3 bits (64), Expect = 2.5 Identities = 17/64 (26%), Positives = 31/64 (48%) Frame = -1 Query: 294 RVEKDQPSQDGNEVEERNDGGLLNCRRSRRGKQSTKLKDLTSLYN*QKHLEHRMWSQGCC 115 +++ ++P D NE+ E DG + C R K L+ L +H +R++S C Sbjct: 402 QLKSNKPLLDLNEIRENFDGSMFEC--ELRLKDHPILRKLVFNEEDYRHRGNRLYSFKTC 459 Query: 114 PVKK 103 +K+ Sbjct: 460 TIKR 463
>MRP_STRSU (P32653) Muramidase-released protein precursor (136 kDa surface| protein) Length = 1256 Score = 28.9 bits (63), Expect = 3.3 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = +3 Query: 33 KITFRVLIHHKMQPETS--FFHSCVISSLDSNLATTYDAPNASVNCKGSSSPSAS 191 + T VL + ++P S F H +++ +SN+ TYD AS N G+ SA+ Sbjct: 292 RTTGDVLEKYTIEPGESVTFSHPTKVNANNSNITVTYDTSLASANTPGALKFSAN 346
>SPR1_SACBA (Q876J2) Sporulation-specific glucan 1,3-beta-glucosidase precursor| (EC 3.2.1.58) (Exo-1,3-beta-glucanase) Length = 445 Score = 28.9 bits (63), Expect = 3.3 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Frame = -3 Query: 199 AKHEAEGL--DEPLQLTEAFGASYVVARLLSSEEMTQEWKKEVSGCILWCMRTLNVILWD 26 A +E GL +E Q T F + L + EMT W I+WC +T N I WD Sbjct: 374 ANNENVGLWSEERKQNTRKF-----IEAQLDAFEMTGGW-------IMWCYKTENSIEWD 421 Query: 25 A*NVVQ 8 ++Q Sbjct: 422 VEKLIQ 427
>SPR1_YEAST (P32603) Sporulation-specific glucan 1,3-beta-glucosidase precursor| (EC 3.2.1.58) (Exo-1,3-beta-glucanase) Length = 445 Score = 28.5 bits (62), Expect = 4.3 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = -3 Query: 118 LSSEEMTQEWKKEVSGCILWCMRTLNVILWDA*NVVQ 8 L + EMT W I+WC +T N I WD ++Q Sbjct: 398 LDAFEMTGGW-------IMWCYKTENSIEWDVEKLIQ 427
>ZN272_HUMAN (Q14592) Zinc finger protein 272 (Zinc finger protein 460) (Zinc| finger protein HZF8) Length = 562 Score = 28.1 bits (61), Expect = 5.6 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +2 Query: 110 TGQQPCDHIRCSKCFCQL*RLVKSFS 187 TG++P I+C K FC+ L++ FS Sbjct: 443 TGEKPYVCIQCGKAFCRTTNLIRHFS 468
>PSD3_HUMAN (O43242) 26S proteasome non-ATPase regulatory subunit 3 (26S| proteasome regulatory subunit S3) (Proteasome subunit p58) Length = 534 Score = 28.1 bits (61), Expect = 5.6 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = +2 Query: 41 IQSSHTPQNATRNFLLPFL 97 +Q T NATR+FLLPFL Sbjct: 117 VQGFFTSNNATRDFLLPFL 135
>AATC_YEAST (P23542) Aspartate aminotransferase, cytoplasmic (EC 2.6.1.1)| (Transaminase A) Length = 417 Score = 27.7 bits (60), Expect = 7.3 Identities = 11/25 (44%), Positives = 20/25 (80%) Frame = -3 Query: 151 AFGASYVVARLLSSEEMTQEWKKEV 77 A+GA +VA+LL + E+T++W K++ Sbjct: 300 AYGAK-IVAKLLETPELTEQWHKDM 323
>KPRS_LEPIN (Q8EZN0) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)| (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) Length = 312 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -2 Query: 350 RMNAEMIAQVKLMEKIQLPELKKINQAK 267 R+N+ ++V L I +PE KKIN+ K Sbjct: 259 RINSTQFSEVVLANTIAIPESKKINKLK 286
>KPRS_LEPIC (Q72V73) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)| (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) Length = 312 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -2 Query: 350 RMNAEMIAQVKLMEKIQLPELKKINQAK 267 R+N+ ++V L I +PE KKIN+ K Sbjct: 259 RINSTQFSEVVLANTIAIPESKKINKLK 286
>PC_DROME (P26017) Polycomb group protein Pc (Protein polycomb)| Length = 390 Score = 27.3 bits (59), Expect = 9.5 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = +3 Query: 21 HASHKITFRVLIHHKMQPETSFFHSCVISSLDSNLATTYDAP 146 H H + R I H +SF H+ + DSN +++ D P Sbjct: 163 HHHHHESKRQRIDHSSSSNSSFTHNSFVPEPDSNSSSSEDQP 204 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,239,260 Number of Sequences: 219361 Number of extensions: 807243 Number of successful extensions: 2921 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2722 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2921 length of database: 80,573,946 effective HSP length: 92 effective length of database: 60,392,734 effective search space used: 1449425616 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)