Clone Information

BLAST Search Result

Clone Name	rbastl56g02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)	89	3e-18
2	LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)	80	1e-15
3	LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygena...	79	3e-15
4	LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase...	77	7e-15
5	LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)	66	2e-11
6	LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)	55	4e-08
7	LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)	55	4e-08
8	LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)	54	7e-08
9	LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)	52	3e-07
10	LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)	52	3e-07
11	LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)	52	3e-07
12	LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)	52	4e-07
13	LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)	50	1e-06
14	LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)	50	1e-06
15	LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)	50	2e-06
16	LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)	48	5e-06
17	LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)	47	8e-06
18	LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)	45	3e-05
19	LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)	44	7e-05
20	LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)	40	0.001
21	LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC...	40	0.002
22	LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC...	39	0.002
23	LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)	39	0.004
24	LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1...	37	0.015
25	LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precur...	36	0.019
26	LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC...	33	0.16
27	LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13...	32	0.28
28	SYP_MYCTU (O05814) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline...	31	0.62
29	FRIZ3_DROME (O77438) Protein frizzled-3 precursor (dFz3)	31	0.62
30	SEPP1_PONPY (Q5R8W9) Selenoprotein P precursor (SeP)	30	1.1
31	SEPP1_HUMAN (P49908) Selenoprotein P precursor (SeP)	30	1.1
32	GCSP_PROAC (Q6A9R8) Glycine dehydrogenase [decarboxylating] (EC ...	30	1.1
33	FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3	29	2.3
34	NOTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2 pr...	29	3.1
35	NOTC2_HUMAN (Q04721) Neurogenic locus notch homolog protein 2 pr...	29	3.1
36	IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2	28	4.0
37	NORR_SALTY (Q8ZMJ8) Anaerobic nitric oxide reductase transcripti...	28	4.0
38	NORR_SALTI (Q8Z4C6) Anaerobic nitric oxide reductase transcripti...	28	4.0
39	ALR1_SALTY (P0A1A3) Alanine racemase, biosynthetic (EC 5.1.1.1)	28	5.2
40	ALR1_SALTI (P0A1A4) Alanine racemase, biosynthetic (EC 5.1.1.1)	28	5.2
41	CB024_HUMAN (Q9BV87) Protein C2orf24	28	5.2
42	KNOB_PLAFN (P06719) Knob-associated histidine-rich protein precu...	28	5.2
43	GOR_PANTR (P48778) Exonuclease GOR (EC 3.1.-.-) (Antigen GOR) (R...	28	6.8
44	GOR_HUMAN (Q8IX06) Exonuclease GOR (EC 3.1.-.-) (Antigen GOR) (R...	28	6.8
45	ACV1C_HUMAN (Q8NER5) Activin receptor type 1C precursor (EC 2.7....	28	6.8
46	CX017_HUMAN (Q9NX05) Protein CXorf17 (Tumor antigen BJ-HCC-21)	27	8.9
47	YTRP_PSEPU (P40604) Hypothetical 62.7 kDa protein in trpE-trpG i...	27	8.9
48	CB024_PONPY (Q5R4U5) Protein C2orf24 homolog	27	8.9
49	THII_HALSA (Q9HQ72) Probable thiamine biosynthesis protein thiI	27	8.9
50	ARNT_RAT (P41739) Aryl hydrocarbon receptor nuclear translocator...	27	8.9

>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 88.6 bits (218), Expect = 3e-18
 Identities = 41/49 (83%), Positives = 43/49 (87%)
 Frame = -2

Query: 403 VVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 257
           VV MN DP+LKNR GPAKFPYMLLYPNTSDH G A GLTA+GIPNSISI
Sbjct: 814 VVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 862

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>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)|
          Length = 866

 Score = 80.1 bits (196), Expect = 1e-15
 Identities = 38/49 (77%), Positives = 41/49 (83%)
 Frame = -2

Query: 403 VVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 257
           VV MN D  LKNR GPA+FPYMLLYPNTSD TG A G+TA+GIPNSISI
Sbjct: 818 VVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIPNSISI 866

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>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)|
          Length = 863

 Score = 79.0 bits (193), Expect = 3e-15
 Identities = 36/49 (73%), Positives = 41/49 (83%)
 Frame = -2

Query: 403 VVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 257
           V+ MN DP LKNR GPA FPY L++PNTSD+ G AEG+TARGIPNSISI
Sbjct: 815 VLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITARGIPNSISI 863

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>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)|
          Length = 870

 Score = 77.4 bits (189), Expect = 7e-15
 Identities = 37/49 (75%), Positives = 38/49 (77%)
 Frame = -2

Query: 403 VVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 257
           VVAMN DP  KNR GP  FPY LLYPNTSD  G A GL+ARGIPNSISI
Sbjct: 822 VVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIPNSISI 870

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>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)|
          Length = 877

 Score = 65.9 bits (159), Expect = 2e-11
 Identities = 33/47 (70%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
 Frame = -2

Query: 394 MNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQ-AEGLTARGIPNSISI 257
           MN +  LKNR GP K PYMLLYPNTSD T +  +GLTA GIPNSISI
Sbjct: 831 MNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSISI 877

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>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)|
          Length = 853

 Score = 55.1 bits (131), Expect = 4e-08
 Identities = 28/49 (57%), Positives = 33/49 (67%)
 Frame = -2

Query: 403 VVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 257
           ++  N D  L+NR GPAK PY LLYP++       EGLT RGIPNSISI
Sbjct: 811 LIEKNKDETLRNRYGPAKMPYTLLYPSSE------EGLTFRGIPNSISI 853

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>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)|
          Length = 864

 Score = 55.1 bits (131), Expect = 4e-08
 Identities = 28/47 (59%), Positives = 31/47 (65%)
 Frame = -2

Query: 397 AMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 257
           A NSDP L+NRTGP + PY LL      H    EGLT +GIPNSISI
Sbjct: 824 ARNSDPSLRNRTGPVQLPYTLL------HRSSEEGLTFKGIPNSISI 864

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>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)|
          Length = 866

 Score = 54.3 bits (129), Expect = 7e-08
 Identities = 27/45 (60%), Positives = 31/45 (68%)
 Frame = -2

Query: 391 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 257
           N+D  L+NR GP K PY LLYP++       EGLT RGIPNSISI
Sbjct: 828 NNDESLRNRYGPVKMPYTLLYPSSE------EGLTCRGIPNSISI 866

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>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)|
          Length = 861

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 26/45 (57%), Positives = 32/45 (71%)
 Frame = -2

Query: 391 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 257
           N+D +L+NR GP + PY LLYP++       EGLT RGIPNSISI
Sbjct: 823 NNDEKLRNRHGPVEMPYTLLYPSSK------EGLTFRGIPNSISI 861

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>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 26/49 (53%), Positives = 30/49 (61%)
 Frame = -2

Query: 403 VVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 257
           ++  N D  L+NR GP K PY +L P   D     EGLT RGIPNSISI
Sbjct: 819 IMGRNKDSSLRNRNGPVKMPYTVLLPTCED-----EGLTFRGIPNSISI 862

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>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)|
          Length = 865

 Score = 52.0 bits (123), Expect = 3e-07
 Identities = 26/45 (57%), Positives = 30/45 (66%)
 Frame = -2

Query: 391 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 257
           N+D  L NR GP + PY LL+PN       +EGLT RGIPNSISI
Sbjct: 828 NNDQSLSNRLGPVQLPYTLLHPN-------SEGLTCRGIPNSISI 865

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>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)|
          Length = 839

 Score = 51.6 bits (122), Expect = 4e-07
 Identities = 28/50 (56%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
 Frame = -2

Query: 403 VVAMNSDPQLK-NRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 257
           +V  N+DP L+ NR GP + PY LLYP++       EGLT RGIPNSISI
Sbjct: 796 LVRRNNDPSLQGNRLGPVQLPYTLLYPSSE------EGLTFRGIPNSISI 839

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>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)|
          Length = 864

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 25/45 (55%), Positives = 31/45 (68%)
 Frame = -2

Query: 391 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 257
           N+DP L +R GP + PY LL+P++       EGLT RGIPNSISI
Sbjct: 826 NNDPSLYHRVGPVQLPYTLLHPSSK------EGLTFRGIPNSISI 864

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>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)|
          Length = 859

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 24/49 (48%), Positives = 31/49 (63%)
 Frame = -2

Query: 403 VVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 257
           ++ MNS    KNR+GP   PY LL+P +       EGLT +GIPNS+SI
Sbjct: 817 IMIMNSHKSWKNRSGPVNVPYTLLFPTSE------EGLTGKGIPNSVSI 859

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>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)|
          Length = 857

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 25/45 (55%), Positives = 31/45 (68%)
 Frame = -2

Query: 391 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 257
           N+D +L+NR GP + PY LL P++       EGLT RGIPNSISI
Sbjct: 819 NNDEKLRNRCGPVQMPYTLLLPSSK------EGLTFRGIPNSISI 857

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>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 859

 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 24/45 (53%), Positives = 29/45 (64%)
 Frame = -2

Query: 391 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 257
           N D  LKNRTG  K PY LL+P++        G+T RGIPNS+SI
Sbjct: 821 NDDETLKNRTGLVKMPYTLLFPSSEG------GVTGRGIPNSVSI 859

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>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)|
          Length = 741

 Score = 47.4 bits (111), Expect = 8e-06
 Identities = 24/43 (55%), Positives = 29/43 (67%)
 Frame = -2

Query: 403 VVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGI 275
           +V  N+D  L+NRTGPAK PY LLYP++       EGLT RGI
Sbjct: 705 LVQKNNDETLRNRTGPAKMPYTLLYPSSE------EGLTFRGI 741

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>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 861

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 22/49 (44%), Positives = 29/49 (59%)
 Frame = -2

Query: 403 VVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 257
           ++  N D  L NR+GP   PY LL+P +        GLT +GIPNS+SI
Sbjct: 819 IIQRNGDNILTNRSGPVNAPYTLLFPTSEG------GLTGKGIPNSVSI 861

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>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)|
          Length = 860

 Score = 44.3 bits (103), Expect = 7e-05
 Identities = 22/49 (44%), Positives = 29/49 (59%)
 Frame = -2

Query: 403 VVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 257
           ++  N +  L NRTGP   PY LL+P +        GLT +GIPNS+SI
Sbjct: 818 IMQRNGNNILTNRTGPVNAPYTLLFPTSEG------GLTGKGIPNSVSI 860

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>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)|
          Length = 899

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = -2

Query: 391 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 257
           N+DP  +NR G    PY L+ P++        G+T RG+PNS++I
Sbjct: 861 NADPSRRNRCGAGVLPYELMAPSS------GPGITCRGVPNSVTI 899

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>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)|
           (LOX2:Hv:3)
          Length = 896

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 22/45 (48%), Positives = 27/45 (60%)
 Frame = -2

Query: 391 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 257
           N++P+ KNR G    PY LL P +        G+T RGIPNSISI
Sbjct: 858 NNNPENKNRCGAGIVPYELLKPFSEP------GVTGRGIPNSISI 896

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>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)|
            (LOX-100) (LOX2:Hv:1)
          Length = 936

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
 Frame = -2

Query: 391  NSDPQLKNRTGPAKFPYMLLYPNTSDHTG----QAEGLTARGIPNSISI 257
            N+DP  KNR G    PY+LL P+  D T       + +   GIPNSISI
Sbjct: 888  NNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMGIPNSISI 936

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>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)|
          Length = 918

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 21/45 (46%), Positives = 26/45 (57%)
 Frame = -2

Query: 391 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 257
           N+D   KNR G    PY LL P++        G+T RG+PNSISI
Sbjct: 880 NADHGRKNRCGAGVLPYELLAPSSPP------GVTCRGVPNSISI 918

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>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)|
          Length = 924

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 20/45 (44%), Positives = 24/45 (53%)
 Frame = -2

Query: 391  NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 257
            N D +LKNR G    PY L+ P +        G+T  GIPNS SI
Sbjct: 886  NKDRKLKNRCGAGILPYQLMKPFSD------SGVTGMGIPNSTSI 924

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>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC|
            1.13.11.12)
          Length = 941

 Score = 36.2 bits (82), Expect = 0.019
 Identities = 20/45 (44%), Positives = 24/45 (53%)
 Frame = -2

Query: 391  NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 257
            N D +LKNR G    PY L+ P +        G+T  GIPNS SI
Sbjct: 903  NKDRKLKNRCGAGILPYQLMKPFSD------AGVTGMGIPNSTSI 941

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>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)|
            (LOX2:Hv:2)
          Length = 932

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 19/45 (42%), Positives = 25/45 (55%)
 Frame = -2

Query: 391  NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 257
            N D   +NR G    PY+LL P  + +   A+ +   GIPNSISI
Sbjct: 889  NKDDSRRNRHGAGVVPYVLLRP-LNGNPMDAKTVMEMGIPNSISI 932

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>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)|
          Length = 896

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 21/45 (46%), Positives = 25/45 (55%)
 Frame = -2

Query: 391 NSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 257
           N +  LKNR G     Y LL P TS+H     G+T  G+P SISI
Sbjct: 858 NVNITLKNRAGAGVVKYELLKP-TSEH-----GVTGMGVPYSISI 896

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>SYP_MYCTU (O05814) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA|
           ligase) (ProRS)
          Length = 582

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 20/40 (50%), Positives = 23/40 (57%)
 Frame = +2

Query: 236 TTDVLRSDGYAVRDAPGGEPLGLSRVVGGVWVEQHVWELG 355
           T DVL  DG  VR   G   +G+SR+V  V  EQH  ELG
Sbjct: 438 TADVLGEDGKPVRLTMGSYGIGVSRLV-AVVAEQHHDELG 476

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>FRIZ3_DROME (O77438) Protein frizzled-3 precursor (dFz3)|
          Length = 581

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
 Frame = -2

Query: 340 MLLYPNTSDHTGQ--AEGLTARGIPNSISI*SEHVRR---RDLMLLCYPCLLTPELACVC 176
           M   PN + HT Q  AE   A+ +P   S  S   R      L  LC P +  P  AC  
Sbjct: 55  MTALPNLAGHTNQLEAELQIAKLVPLIESGCSRRARFLLCSSLFPLCTPDVPRPVAACKL 114

Query: 175 VCDTELCRCMNN 140
           +C+T    CM N
Sbjct: 115 LCETVRGECMEN 126

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>SEPP1_PONPY (Q5R8W9) Selenoprotein P precursor (SeP)|
          Length = 381

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = -1

Query: 359 AGQVPIHAALPKHLRPHGTGRGAHRQGHPE 270
           A   P H A P  L  H   +G HRQGHPE
Sbjct: 231 APDAPTHPA-PPGLHHHHKHKGQHRQGHPE 259

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>SEPP1_HUMAN (P49908) Selenoprotein P precursor (SeP)|
          Length = 381

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = -1

Query: 359 AGQVPIHAALPKHLRPHGTGRGAHRQGHPE 270
           A   P H A P  L  H   +G HRQGHPE
Sbjct: 231 APNAPTHPA-PPGLHHHHKHKGQHRQGHPE 259

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>GCSP_PROAC (Q6A9R8) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)|
           (Glycine decarboxylase) (Glycine cleavage system
           P-protein)
          Length = 994

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -1

Query: 404 GGGHELGPAAQEPHRAGQVPIHAALPKHLRPHGTGRGAHRQGH 276
           GGG  +GP A + H A  +P H   P++  P   G      GH
Sbjct: 724 GGGPGVGPVAAKAHLAPFLPGHPLNPRNEHPLNDGGTVTHDGH 766

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>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3|
          Length = 623

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
 Frame = -1

Query: 383 PAAQEPHRAGQVPIHAALPKHLRPHGTGRG----AHRQGHPEQHIHL 255
           P+   PHR   +P H   P+H  PH          H Q HP  H H+
Sbjct: 380 PSPHTPHRPHGLPQHPQRPQHPAPHPQQHSQLQPPHSQ-HPPPHQHI 425

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>NOTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2 precursor (Notch|
           2) (Motch B) [Contains: Notch 2 extracellular
           truncation; Notch 2 intracellular domain]
          Length = 2470

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
 Frame = -2

Query: 184 CVCV-------CDTELCRCMNN*GNKGACTTGLIGMRKLSSAGYRSMHRRVQK 47
           C+C        C +++  C++N    G CT GL G + L  AG+  ++  V K
Sbjct: 704 CICPEGPHHPSCYSQVNECLSNPCIHGNCTGGLSGYKCLCDAGWVGVNCEVDK 756

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>NOTC2_HUMAN (Q04721) Neurogenic locus notch homolog protein 2 precursor (Notch|
           2) (hN2) [Contains: Notch 2 extracellular truncation;
           Notch 2 intracellular domain]
          Length = 2471

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
 Frame = -2

Query: 184 CVCV-------CDTELCRCMNN*GNKGACTTGLIGMRKLSSAGYRSMHRRVQK 47
           C+C        C +++  C++N    G CT GL G + L  AG+  ++  V K
Sbjct: 706 CICPEGPHHPSCYSQVNECLSNPCIHGNCTGGLSGYKCLCDAGWVGINCEVDK 758

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>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2|
          Length = 1033

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = -1

Query: 401 GGHELGPAAQEPHRAGQVPIHAALPKHLRPHGTGRGAHRQGHPEQHIHLI*ARPSSRP 228
           GG   GP  Q P   G  P   ++P   RP G G G    G P  +  ++  RP++ P
Sbjct: 262 GGQGGGPRPQAP--GGNRPSPGSMP---RPQGGGAGPRPGGGPRPNPGMMPQRPAAGP 314

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>NORR_SALTY (Q8ZMJ8) Anaerobic nitric oxide reductase transcription regulator|
           norR
          Length = 506

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +2

Query: 296 LGLSRVVGGVWVEQHVWELGRPGAVLELRVRVH 394
           LGLSRVV      +H+   G PG V EL   +H
Sbjct: 380 LGLSRVVLSPGARRHLLNYGWPGNVRELEHAIH 412

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>NORR_SALTI (Q8Z4C6) Anaerobic nitric oxide reductase transcription regulator|
           norR
          Length = 506

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +2

Query: 296 LGLSRVVGGVWVEQHVWELGRPGAVLELRVRVH 394
           LGLSRVV      +H+   G PG V EL   +H
Sbjct: 380 LGLSRVVLSPGARRHLLNYGWPGNVRELEHAIH 412

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>ALR1_SALTY (P0A1A3) Alanine racemase, biosynthetic (EC 5.1.1.1)|
          Length = 359

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +2

Query: 248 LRSDGYAVRDAPGGEPLGLSRVVGGVWVEQHVWELG 355
           L S   AVRD   GEP+G     GG WV +    LG
Sbjct: 237 LTSSLIAVRDHKAGEPVG----YGGTWVSERDTRLG 268

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>ALR1_SALTI (P0A1A4) Alanine racemase, biosynthetic (EC 5.1.1.1)|
          Length = 359

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +2

Query: 248 LRSDGYAVRDAPGGEPLGLSRVVGGVWVEQHVWELG 355
           L S   AVRD   GEP+G     GG WV +    LG
Sbjct: 237 LTSSLIAVRDHKAGEPVG----YGGTWVSERDTRLG 268

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>CB024_HUMAN (Q9BV87) Protein C2orf24|
          Length = 410

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
 Frame = -2

Query: 268 SISI*SEHVRRRDLMLLCYPCLLTPELACVCVCDTELC-----RCMNN*GNKGACTTGLI 104
           ++++ S  V  + L L C P    P+L     C  E C     +C+ +  N  +C  G +
Sbjct: 244 ALAVASVAVIHQSLGLSCTPTPGPPDLGLTSRCLLEPCIPSVPQCLPSPANVSSCLEGSM 303

Query: 103 GMRKL 89
           G+R L
Sbjct: 304 GLRSL 308

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>KNOB_PLAFN (P06719) Knob-associated histidine-rich protein precursor (KAHRP)|
          Length = 657

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = -1

Query: 395 HELGPAAQEPHRAGQVPIHAALPKHLRPHGTGRGAHRQGHPEQHIH 258
           H+    A   H  G+V  H A   H + HG  +  H   H   H+H
Sbjct: 79  HQAPHQAHHHHHHGEVN-HQAPQVHQQVHGQDQAHHHHHHHHHHLH 123

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>GOR_PANTR (P48778) Exonuclease GOR (EC 3.1.-.-) (Antigen GOR) (RNA|
           exonuclease 1 homolog-like)
          Length = 427

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -3

Query: 387 RTRSSRTAPGRPSSHTCCS 331
           R RSS+ A GR S +TCC+
Sbjct: 84  RVRSSQVAGGRVSQYTCCA 102

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>GOR_HUMAN (Q8IX06) Exonuclease GOR (EC 3.1.-.-) (Antigen GOR) (RNA|
           exonuclease 1 homolog-like)
          Length = 318

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -3

Query: 387 RTRSSRTAPGRPSSHTCCS 331
           R RSS+ A GR S +TCC+
Sbjct: 84  RVRSSQVAGGRVSQYTCCA 102

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>ACV1C_HUMAN (Q8NER5) Activin receptor type 1C precursor (EC 2.7.11.30)|
           (ACTR-IC) (Activin receptor-like kinase 7) (ALK-7)
          Length = 493

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -2

Query: 238 RRDLMLLCYPCLLTPELACVC-VCDTELCRCMNN*GNKGAC 119
           R+ L+LL     L+P L CVC +CD+    C      +GAC
Sbjct: 10  RQALLLLAAAAELSPGLKCVCLLCDSSNFTCQ----TEGAC 46

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>CX017_HUMAN (Q9NX05) Protein CXorf17 (Tumor antigen BJ-HCC-21)|
          Length = 1096

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
 Frame = -1

Query: 389 LGPAAQEPHRAGQVPIHAALPKH-LRPHGTGRGAHRQGHPEQHIH 258
           L P A    R G VP+   LP   L  +  G G  R  HP  H H
Sbjct: 49  LAPGAPRAAR-GSVPLQPPLPPAALGAYSGGAGPTRHHHPAHHFH 92

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>YTRP_PSEPU (P40604) Hypothetical 62.7 kDa protein in trpE-trpG intergenic|
           region precursor
          Length = 592

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = +2

Query: 272 RDAPGGEPLGLSRVVGGVWVEQHVWELGRPGAVLELRVRVHGH 400
           R    G+  G +  VGG +     W LG  G V   ++   GH
Sbjct: 368 RAGASGDGRGYNLTVGGSYRLNDAWRLGLAGGVYRQKLEAGGH 410

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>CB024_PONPY (Q5R4U5) Protein C2orf24 homolog|
          Length = 410

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
 Frame = -2

Query: 268 SISI*SEHVRRRDLMLLCYPCLLTPELACVCVCDTELC-----RCMNN*GNKGACTTGLI 104
           ++++ S  V  + L L C P    P+L     C  E C     +C+ +  N  +C  G  
Sbjct: 244 ALAVASVAVIHQSLGLSCTPTPGPPDLGLTSRCLLEPCIPSVPQCLPSPANVSSCLEGST 303

Query: 103 GMRKL 89
           G+R L
Sbjct: 304 GLRSL 308

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>THII_HALSA (Q9HQ72) Probable thiamine biosynthesis protein thiI|
          Length = 392

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
 Frame = +2

Query: 272 RDAPGGEPLG-----LSRVVGGVWVEQHVWELGRPGA 367
           RD PGG PLG     ++ V GG+      WE  R GA
Sbjct: 170 RDGPGGMPLGTQQPLVALVSGGIDSPVAAWESMRRGA 206

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>ARNT_RAT (P41739) Aryl hydrocarbon receptor nuclear translocator (ARNT|
           protein) (Dioxin receptor, nuclear translocator)
           (Hypoxia-inducible factor 1 beta) (HIF-1 beta)
          Length = 800

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -1

Query: 290 HRQGHPEQHIHLI*ARPSSRPHAF--VLSLL 204
           HR    EQH+    A+PSS+P  F  +LS+L
Sbjct: 747 HRSSSNEQHVQPTSAQPSSQPEVFQEMLSML 777


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,835,995
Number of Sequences: 219361
Number of extensions: 1309224
Number of successful extensions: 3703
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 3551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3672
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 1354661664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result