ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl56f11 |
|---|---|
| Clone Library Name | barley_pub |
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 137 bits (344), Expect = 8e-33 Identities = 68/73 (93%), Positives = 68/73 (93%), Gaps = 5/73 (6%) Frame = -1 Query: 356 GVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS-----DGDPTDEK 192 GVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS DGDPTDEK Sbjct: 864 GVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEK 923 Query: 191 MVMEMGIPNSISI 153 MVMEMGIPNSISI Sbjct: 924 MVMEMGIPNSISI 936
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 97.4 bits (241), Expect = 7e-21 Identities = 44/68 (64%), Positives = 55/68 (80%) Frame = -1 Query: 356 GVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEM 177 G +++AF+ F++ R I EQV+EWN D R+NRHGAG+VPYVLLRP +G+P D K VMEM Sbjct: 865 GEVDKAFQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRPLNGNPMDAKTVMEM 924 Query: 176 GIPNSISI 153 GIPNSISI Sbjct: 925 GIPNSISI 932
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 54.3 bits (129), Expect = 7e-08 Identities = 30/67 (44%), Positives = 40/67 (59%) Frame = -1 Query: 353 VINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMG 174 ++ AFE+F ++ +D NN+P+ KNR GAG+VPY LL+ P E V G Sbjct: 835 MVKAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLK-----PFSEPGVTGRG 889 Query: 173 IPNSISI 153 IPNSISI Sbjct: 890 IPNSISI 896
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 51.6 bits (122), Expect = 5e-07 Identities = 32/67 (47%), Positives = 39/67 (58%) Frame = -1 Query: 353 VINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMG 174 VIN AFE FK + + +DE N + KNR GAG+V Y LL+ PT E V MG Sbjct: 835 VINAAFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLK-----PTSEHGVTGMG 889 Query: 173 IPNSISI 153 +P SISI Sbjct: 890 VPYSISI 896
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 51.2 bits (121), Expect = 6e-07 Identities = 29/64 (45%), Positives = 38/64 (59%) Frame = -1 Query: 344 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 165 +AFE+F E ++I + +DE N+D KNR G +PY LL PS E V GIPN Sbjct: 801 EAFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPS-----SEGGVTGRGIPN 855 Query: 164 SISI 153 S+SI Sbjct: 856 SVSI 859
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 50.8 bits (120), Expect = 8e-07 Identities = 25/63 (39%), Positives = 37/63 (58%) Frame = -1 Query: 341 AFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 162 A EF R+ E+++ N DP R+NR GAG++PY L+ PS G + G+PNS Sbjct: 842 AAREFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSSGPG-----ITCRGVPNS 896 Query: 161 ISI 153 ++I Sbjct: 897 VTI 899
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 46.6 bits (109), Expect = 2e-05 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%) Frame = -1 Query: 341 AFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEK--MVMEMGIP 168 AF+ F I ++ + N + KNR+G +PY+LL P+ D T EK + MGIP Sbjct: 813 AFKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIP 872 Query: 167 NSISI 153 NSISI Sbjct: 873 NSISI 877
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 46.6 bits (109), Expect = 2e-05 Identities = 27/67 (40%), Positives = 39/67 (58%) Frame = -1 Query: 353 VINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMG 174 V +AF+ F + +I E++ + NND +NR+G +PY LL PS E+ + G Sbjct: 805 VPKEAFKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPS-----SEEGLTCRG 859 Query: 173 IPNSISI 153 IPNSISI Sbjct: 860 IPNSISI 866
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 46.2 bits (108), Expect = 2e-05 Identities = 28/65 (43%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Frame = -1 Query: 344 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGD-PTDEKMVMEMGIP 168 +AF+ F +I +V N DP RKNR G PY LL P+ D D + GIP Sbjct: 806 EAFKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIP 865 Query: 167 NSISI 153 NSISI Sbjct: 866 NSISI 870
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 45.4 bits (106), Expect = 3e-05 Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Frame = -1 Query: 344 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM-VMEMGIP 168 + F+ F + +I +V N+DP+ KNR+G PY+LL P+ D + GIP Sbjct: 798 EVFKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIP 857 Query: 167 NSISI 153 NSISI Sbjct: 858 NSISI 862
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 45.1 bits (105), Expect = 4e-05 Identities = 25/64 (39%), Positives = 38/64 (59%) Frame = -1 Query: 344 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 165 +AF++F +I +++ + NND +NRHG +PY LL PS ++ + GIPN Sbjct: 803 EAFKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPS-----SKEGLTFRGIPN 857 Query: 164 SISI 153 SISI Sbjct: 858 SISI 861
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 44.3 bits (103), Expect = 7e-05 Identities = 25/64 (39%), Positives = 37/64 (57%) Frame = -1 Query: 344 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 165 +AF+ F + +I +++ E N D +NR+G +PY LL PS E+ + GIPN Sbjct: 795 EAFKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPS-----SEEGLTFRGIPN 849 Query: 164 SISI 153 SISI Sbjct: 850 SISI 853
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 44.3 bits (103), Expect = 7e-05 Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Frame = -1 Query: 344 QAFEEFKESTRKIVEQVDEWNNDPD-RKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIP 168 QAF++F ++I E++ NNDP + NR G +PY LL PS E+ + GIP Sbjct: 780 QAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPS-----SEEGLTFRGIP 834 Query: 167 NSISI 153 NSISI Sbjct: 835 NSISI 839
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 43.9 bits (102), Expect = 1e-04 Identities = 25/66 (37%), Positives = 36/66 (54%) Frame = -1 Query: 350 INQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGI 171 + A++ F ++I +D N D KNR GAG++PY L++ P + V MGI Sbjct: 864 VQAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMK-----PFSDSGVTGMGI 918 Query: 170 PNSISI 153 PNS SI Sbjct: 919 PNSTSI 924
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 43.9 bits (102), Expect = 1e-04 Identities = 26/64 (40%), Positives = 34/64 (53%) Frame = -1 Query: 344 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 165 QAF++F ++I E++ NND NR G +PY LL P+ T GIPN Sbjct: 808 QAFQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHPNSEGLTCR------GIPN 861 Query: 164 SISI 153 SISI Sbjct: 862 SISI 865
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 43.9 bits (102), Expect = 1e-04 Identities = 26/59 (44%), Positives = 32/59 (54%) Frame = -1 Query: 329 FKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 153 F R+ E ++ N D RKNR GAG++PY LL PS V G+PNSISI Sbjct: 865 FAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPS-----SPPGVTCRGVPNSISI 918
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 43.9 bits (102), Expect = 1e-04 Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Frame = -1 Query: 344 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKM-VMEMGIP 168 +AF F + +I +V N D KNR+G PY+LL P+ D T + GIP Sbjct: 802 EAFRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIP 861 Query: 167 NSISI 153 NSISI Sbjct: 862 NSISI 866
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 43.1 bits (100), Expect = 2e-04 Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 4/68 (5%) Frame = -1 Query: 344 QAFEEFKESTRKIVE---QVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTD-EKMVMEM 177 +A E FK +R++VE +V N DP KNR G PY L+ P+ D + + Sbjct: 796 KALEAFKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITAR 855 Query: 176 GIPNSISI 153 GIPNSISI Sbjct: 856 GIPNSISI 863
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 42.7 bits (99), Expect = 2e-04 Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -1 Query: 350 INQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRP-SDGDPTDEKMVMEMG 174 + A+ F ++I +D N D KNR GAG++PY L++P SD T MG Sbjct: 881 VQAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTG------MG 934 Query: 173 IPNSISI 153 IPNS SI Sbjct: 935 IPNSTSI 941
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 42.4 bits (98), Expect = 3e-04 Identities = 25/64 (39%), Positives = 35/64 (54%) Frame = -1 Query: 344 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 165 QAF++F +I ++ NNDP +R G +PY LL PS ++ + GIPN Sbjct: 806 QAFQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPS-----SKEGLTFRGIPN 860 Query: 164 SISI 153 SISI Sbjct: 861 SISI 864
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 42.4 bits (98), Expect = 3e-04 Identities = 25/64 (39%), Positives = 35/64 (54%) Frame = -1 Query: 344 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 165 +AF+ F +I ++ E NND +NR G +PY LL PS ++ + GIPN Sbjct: 799 EAFKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPS-----SKEGLTFRGIPN 853 Query: 164 SISI 153 SISI Sbjct: 854 SISI 857
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 42.4 bits (98), Expect = 3e-04 Identities = 23/64 (35%), Positives = 38/64 (59%) Frame = -1 Query: 344 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 165 QAF+ F + ++I E++ N D +NR+G +PY +L P+ +++ + GIPN Sbjct: 803 QAFKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPT----CEDEGLTFRGIPN 858 Query: 164 SISI 153 SISI Sbjct: 859 SISI 862
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 40.0 bits (92), Expect = 0.001 Identities = 24/64 (37%), Positives = 34/64 (53%) Frame = -1 Query: 344 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPN 165 +AF+ F I +++ N+DP +NR G +PY LL S E+ + GIPN Sbjct: 806 EAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLLHRS-----SEEGLTFKGIPN 860 Query: 164 SISI 153 SISI Sbjct: 861 SISI 864
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 38.9 bits (89), Expect = 0.003 Identities = 25/63 (39%), Positives = 32/63 (50%) Frame = -1 Query: 341 AFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 162 AFE F + I ++ N+ KNR G VPY LL PT E+ + GIPNS Sbjct: 802 AFERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLL-----FPTSEEGLTGKGIPNS 856 Query: 161 ISI 153 +SI Sbjct: 857 VSI 859
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 37.4 bits (85), Expect = 0.009 Identities = 24/63 (38%), Positives = 31/63 (49%) Frame = -1 Query: 341 AFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 162 AF+ F + I +Q+ + N D NR G PY LL PT E + GIPNS Sbjct: 804 AFDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLL-----FPTSEGGLTGKGIPNS 858 Query: 161 ISI 153 +SI Sbjct: 859 VSI 861
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 35.8 bits (81), Expect = 0.027 Identities = 24/63 (38%), Positives = 30/63 (47%) Frame = -1 Query: 341 AFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNS 162 AFE F I +Q+ + N + NR G PY LL PT E + GIPNS Sbjct: 803 AFERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLL-----FPTSEGGLTGKGIPNS 857 Query: 161 ISI 153 +SI Sbjct: 858 VSI 860
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 35.0 bits (79), Expect = 0.045 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = -1 Query: 344 QAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPS 216 +AF+ F + +I +++ + NND +NR G +PY LL PS Sbjct: 689 EAFKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYPS 731
>UREE_RHOS4 (Q3J156) Urease accessory protein ureE| Length = 182 Score = 31.6 bits (70), Expect = 0.50 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = -3 Query: 306 RGAGG*VEQRPRPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHPQQHLHLS 148 RG G +E R P +P GA + +G HG G G HP H+H+S Sbjct: 120 RGLGLTLEPRTEPFRP---EGGAYGHGRTLGH-DHGPAQGHGHDHPHVHVHIS 168
>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Flamingo 1) (mFmi1) Length = 2920 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +1 Query: 238 GTMPAPCRFFRSGSLFHSSTCSTIFLVLSLNSSNAWLIT 354 G PCR SG S C+ + + ++SN WL T Sbjct: 31 GDQVGPCRSLGSGGRSSSGACAPVGWLCPASASNLWLYT 69
>ASPA_PROMM (Q7V5L6) Probable aspartoacylase (EC 3.5.1.15)| Length = 304 Score = 28.9 bits (63), Expect = 3.2 Identities = 9/22 (40%), Positives = 15/22 (68%) Frame = -1 Query: 296 VDEWNNDPDRKNRHGAGMVPYV 231 +D+W+ P+ N HG G+VP + Sbjct: 23 LDQWSQTPELINTHGVGVVPVI 44
>Y463_CHRVO (Q7P0V2) UPF0341 protein CV_0463| Length = 258 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/35 (45%), Positives = 17/35 (48%) Frame = -3 Query: 273 RPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHP 169 R E T +HGAV A G H RE G G G P Sbjct: 45 RLELLTTGKHGAVYAEFVEGAARHRREQGGGRGQP 79
>MUTS_STRT2 (Q5M6I1) DNA mismatch repair protein mutS| Length = 852 Score = 28.5 bits (62), Expect = 4.2 Identities = 11/38 (28%), Positives = 20/38 (52%) Frame = -1 Query: 356 GVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGM 243 G+I F+E + RK++ + W D + K R +G+ Sbjct: 410 GIIRDGFDETLDKYRKVMSEGTSWIADIEAKEREASGI 447
>MUTS_STRT1 (Q5M1Z0) DNA mismatch repair protein mutS| Length = 852 Score = 28.5 bits (62), Expect = 4.2 Identities = 11/38 (28%), Positives = 20/38 (52%) Frame = -1 Query: 356 GVINQAFEEFKESTRKIVEQVDEWNNDPDRKNRHGAGM 243 G+I F+E + RK++ + W D + K R +G+ Sbjct: 410 GIIRDGFDETLDKYRKVMSEGTSWIADIEAKEREASGI 447
>DEFR7_MOUSE (P50715) Defensin-related cryptdin, related sequence 7 precursor| (Cryptdin-related protein 4C-2) (CRS4C) Length = 91 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/22 (54%), Positives = 12/22 (54%) Frame = +2 Query: 278 RCSTHPPAPRSSWCSP*TPQMP 343 RC PP PR SWC P P P Sbjct: 64 RCPRCPPCPRCSWC-PRCPTCP 84
>ACDE2_METTE (Q9C4Z3) Acetyl-CoA decarbonylase/synthase complex epsilon subunit| 2 (ACDS complex epsilon subunit 2) Length = 170 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -1 Query: 89 WPGGGYNGNEHQIIIKGHDDIYI 21 WPG NGN II+ GH YI Sbjct: 99 WPGLDGNGNYDTIILLGHKKYYI 121
>TSGA_BUCAI (P57601) Protein tsgA homolog| Length = 388 Score = 27.3 bits (59), Expect = 9.4 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = -1 Query: 350 INQAFEEFKESTRKIVEQVDEWN 282 IN +FE+FK +T+ E ++WN Sbjct: 181 INSSFEKFKTNTKNSKETKEKWN 203
>EDG8_HUMAN (Q9H228) Sphingosine 1-phosphate receptor Edg-8 (Endothelial| differentiation sphingolipid G-protein-coupled receptor 8) (Sphingosine 1-phosphate receptor 5) (S1P5) Length = 398 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/32 (50%), Positives = 19/32 (59%) Frame = +3 Query: 51 NLVLIPIIPTAGPRD*RHSYLRLVELHTHTQG 146 N +L PII T RD RH+ LRLV H+ G Sbjct: 298 NSLLNPIIYTLTNRDLRHALLRLVCCGRHSCG 329
>COAT_PAVHB (P07299) Probable coat protein VP1| Length = 781 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = -1 Query: 329 FKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGD 207 FK RK + WN P H AG +PYVL P+ D Sbjct: 719 FKLGPRKATGR---WNPQPGVYPPHAAGHLPYVLYDPTATD 756 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,107,214 Number of Sequences: 219361 Number of extensions: 1178261 Number of successful extensions: 3302 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 3162 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3277 length of database: 80,573,946 effective HSP length: 94 effective length of database: 59,954,012 effective search space used: 1438896288 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
