ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl56f07 |
|---|---|
| Clone Library Name | barley_pub |
>ETR2_PELHO (Q9XH57) Ethylene receptor 2 (EC 2.7.13.3) (PhETR2)| Length = 741 Score = 50.8 bits (120), Expect = 7e-07 Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 1/72 (1%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIR-KLRSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPVTLA 232 D+ M +DGFE+A+ I K + PLIVAL + D +D C R G+ G++ KPV++ Sbjct: 663 DVCMPEVDGFEIAVRIHEKFMTRHERPLIVALTGNIDQVTKDNCTRVGMEGVVLKPVSID 722 Query: 231 ALGDEVYRVLQH 196 + + + +L+H Sbjct: 723 KMRNVLSNLLEH 734
>ETR1_MALDO (O81122) Ethylene receptor (EC 2.7.13.3)| Length = 741 Score = 47.4 bits (111), Expect = 8e-06 Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 1/72 (1%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIR-KLRSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPVTLA 232 D++M +DG+E+A+ I K P++VAL S D ++ C R G++G++ KPV++ Sbjct: 663 DVSMPGIDGYELAVRIHEKFTKRHERPVLVALTGSIDKITKENCMRVGVDGVILKPVSVD 722 Query: 231 ALGDEVYRVLQH 196 + + +L+H Sbjct: 723 KMRSVLSELLEH 734
>ETR1_LYCES (Q41342) Ethylene receptor 1 (EC 2.7.13.3) (LeETR1)| Length = 754 Score = 45.8 bits (107), Expect = 2e-05 Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 1/72 (1%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIR-KLRSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPVTLA 232 D++M +D +EVA+ I + PLIVAL ++D ++ C R G++G++ KPV++ Sbjct: 677 DVSMQGIDCYEVAVVIHERFGKRHGRPLIVALTGNTDRVTKENCMRVGMDGVILKPVSVY 736 Query: 231 ALGDEVYRVLQH 196 + + +L+H Sbjct: 737 KMRSVLSELLEH 748
>ETR1_PELHO (Q9XH58) Ethylene receptor 1 (EC 2.7.13.3) (PhETR1)| Length = 740 Score = 45.4 bits (106), Expect = 3e-05 Identities = 23/72 (31%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIR-KLRSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPVTLA 232 D+ + +DG E+A+ I K PLIVAL +++D ++ C R G+ G++ KPV++ Sbjct: 663 DVRVPGLDGHELAVRIHEKFMKRHERPLIVALTSNADKVTKENCLRVGMEGVILKPVSVD 722 Query: 231 ALGDEVYRVLQH 196 + + + ++L+H Sbjct: 723 KMRNVLSKLLEH 734
>ETR1_PRUPE (Q9M7M1) Ethylene receptor (EC 2.7.13.3)| Length = 738 Score = 45.1 bits (105), Expect = 4e-05 Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIR-KLRSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPVTLA 232 D+ M +DG+E+A+ I K P++VAL + D ++ C R G++G++ KPV++ Sbjct: 660 DVCMPGIDGYELAVRIHEKFTKRHERPVLVALTGNIDKMTKENCMRVGMDGVILKPVSVD 719 Query: 231 ALGDEVYRVLQH 196 + + +L+H Sbjct: 720 KMRSVLSELLEH 731
>ETR1_TOBAC (O48929) Ethylene receptor (EC 2.7.13.3) (NT-ETR1)| Length = 738 Score = 43.9 bits (102), Expect = 9e-05 Identities = 23/72 (31%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIR-KLRSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPVTLA 232 D+++ +D +EVA+ I K + PLIVAL ++D ++ C R G++G++ KPV++ Sbjct: 661 DVSIPGIDCYEVAVQIHEKFGKHHNRPLIVALTGNTDRVTKENCMRVGMDGVILKPVSVD 720 Query: 231 ALGDEVYRVLQH 196 + + +L+H Sbjct: 721 KMRSVLSELLEH 732
>ETR1_PASED (Q9ZWL6) Ethylene receptor (EC 2.7.13.3) (PE-ETR1)| Length = 738 Score = 43.9 bits (102), Expect = 9e-05 Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%) Frame = -2 Query: 387 DGFEVALAIR-KLRSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPVTLAALGDEVY 211 +GFE A+ + K PL+VAL AS+D ++ C R G++G + KPV++ + + Sbjct: 668 EGFEAAVRLHEKFTKRHERPLVVALTASTDRMTKENCMRVGMDGAILKPVSVDKMRSVLS 727 Query: 210 RVLQH 196 +L+H Sbjct: 728 DLLEH 732
>ETR1_ARATH (P49333) Ethylene receptor (EC 2.7.13.3)| Length = 738 Score = 43.9 bits (102), Expect = 9e-05 Identities = 21/72 (29%), Positives = 45/72 (62%), Gaps = 2/72 (2%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRK--LRSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPVTL 235 D+ M ++ +++AL I + + PL+VAL+ ++D + +++C G++G+L KPV+L Sbjct: 659 DVCMPGVENYQIALRIHEKFTKQRHQRPLLVALSGNTDKSTKEKCMSFGLDGVLLKPVSL 718 Query: 234 AALGDEVYRVLQ 199 + D + +L+ Sbjct: 719 DNIRDVLSDLLE 730
>ETR1_CUCSA (Q9SSY6) Ethylene receptor (EC 2.7.13.3) (CS-ETR1)| Length = 740 Score = 42.0 bits (97), Expect = 3e-04 Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIR-KLRSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPVTL 235 D+ +DG+E+A+ IR K P +V L +SD ++ C R+G++GL+ KPV++ Sbjct: 662 DICTPGVDGYELAIRIREKFAKCHERPFMVVLTGNSDKVTKESCLRAGMDGLILKPVSI 720
>ETR1_CUCMR (O82436) Ethylene receptor (EC 2.7.13.3) (MEETR1) (Cm-ETR1)| Length = 740 Score = 42.0 bits (97), Expect = 3e-04 Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIR-KLRSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPVTL 235 D+ +DG+E+A+ IR K P +V L +SD ++ C R+G++GL+ KPV++ Sbjct: 662 DICTPGVDGYELAIRIREKFAKCHERPFMVVLTGNSDKVTKESCLRAGMDGLILKPVSI 720
>ETR1_BRAOL (O49230) Ethylene receptor (EC 2.7.13.3)| Length = 735 Score = 42.0 bits (97), Expect = 3e-04 Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIR-KLRSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPVTLA 232 D+ ++ +++AL I K PL+VAL ++D + +++C G++G+L KPV+L Sbjct: 657 DVCTPGVENYQIALRIHEKFTKRHQRPLLVALTGNTDKSTKEKCMSFGLDGVLLKPVSLD 716 Query: 231 ALGDEVYRVLQH 196 + + + L+H Sbjct: 717 NMRNVLSDRLEH 728
>MAK1_SCHPO (Q9P7Q7) Peroxide stress-activated histidine kinase mak1 (EC| 2.7.13.3) (Mcs4-associated kinase 1) (His-Asp phosphorelay kinase phk3) Length = 1639 Score = 41.6 bits (96), Expect = 5e-04 Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 2/73 (2%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRKLR-SNSWPPL-IVALAASSDDNVRDRCQRSGINGLLQKPVTL 235 DL M MDG++ IRK N +P + IVAL+A++ +V C+ SG + L KP+TL Sbjct: 1559 DLQMPVMDGYQACNEIRKYELENDYPKVPIVALSANALPHVVLSCKDSGFDSYLAKPITL 1618 Query: 234 AALGDEVYRVLQH 196 L + +L + Sbjct: 1619 QHLSLIISGILNY 1631
>ETR2_LYCES (O49187) Ethylene receptor 2 (EC 2.7.13.3) (LeETR2)| Length = 736 Score = 41.2 bits (95), Expect = 6e-04 Identities = 21/72 (29%), Positives = 43/72 (59%), Gaps = 1/72 (1%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIR-KLRSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPVTLA 232 D ++ M+ ++VA+++ K PLIVAL ++D ++ C R G++G++ KPV++ Sbjct: 661 DASITGMNCYDVAVSVHEKFGKRLERPLIVALTGNTDQVTKENCLRVGMDGVILKPVSID 720 Query: 231 ALGDEVYRVLQH 196 + + +L+H Sbjct: 721 KMRSVLSGLLEH 732
>RCSC_SALTI (Q56128) Sensor protein rcsC (EC 2.7.13.3) (Capsular synthesis| regulator component C) Length = 948 Score = 37.7 bits (86), Expect = 0.007 Identities = 23/61 (37%), Positives = 35/61 (57%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRKLRSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPVTLAA 229 D+ M MDG+ + IR+L + P +V + A++ + RC SG++ L KPVTL A Sbjct: 875 DVNMPNMDGYRLTQRIRQL-GLTLP--VVGVTANALAEEKQRCLESGMDSCLSKPVTLDA 931 Query: 228 L 226 L Sbjct: 932 L 932
>YSO1_PLEBO (P51586) Hypothetical 14.6 kDa protein in sodA1 3'region (ORF131)| Length = 131 Score = 37.0 bits (84), Expect = 0.011 Identities = 23/56 (41%), Positives = 29/56 (51%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRKLRSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPV 241 D+ M MDGFE+ +R+L P I AL A + + R RSG N L KPV Sbjct: 57 DVAMPEMDGFELIGRVRELPKGETLPAI-ALTAYAREEDRQAALRSGFNDYLTKPV 111
>EVGS_ECOLI (P30855) Sensor protein evgS precursor (EC 2.7.13.3)| Length = 1197 Score = 36.6 bits (83), Expect = 0.015 Identities = 24/61 (39%), Positives = 33/61 (54%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRKLRSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPVTLAA 229 D+ M MDGFE+ RKLR + I L A++ N R++ G+N L KP+TL Sbjct: 1009 DVNMPNMDGFELT---RKLREQNSSLPIWGLTANAQANEREKGLSCGMNLCLFKPLTLDV 1065 Query: 228 L 226 L Sbjct: 1066 L 1066
>SLN1_YEAST (P39928) Osmolarity two-component system protein SLN1 (EC 2.7.13.3)| Length = 1220 Score = 36.2 bits (82), Expect = 0.019 Identities = 22/56 (39%), Positives = 30/56 (53%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRKLRSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPV 241 D+ M +DG IR+ + P IVAL A +DD+ C SG+NG L KP+ Sbjct: 1144 DVQMPKVDGLLSTKMIRRDLGYTSP--IVALTAFADDSNIKECLESGMNGFLSKPI 1197
>RCSC_SALTY (P58662) Sensor protein rcsC (EC 2.7.13.3) (Capsular synthesis| regulator component C) Length = 948 Score = 36.2 bits (82), Expect = 0.019 Identities = 22/61 (36%), Positives = 34/61 (55%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRKLRSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPVTLAA 229 D+ M MDG+ + IR+L + P +V + A++ + RC SG++ L KPVTL Sbjct: 875 DVNMPNMDGYRLTQRIRQL-GLTLP--VVGVTANALAEEKQRCLESGMDSCLSKPVTLDV 931 Query: 228 L 226 L Sbjct: 932 L 932
>TCSB_EMENI (Q9P4U6) Two-component system protein B precursor (EC 2.7.13.3) (NHK1| protein) (SLN1 homolog) Length = 1070 Score = 35.8 bits (81), Expect = 0.025 Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRKLRSNSWPPLIVALAA-SSDDNVRDRCQRSGINGLLQKPVTLA 232 D+ M +DG E IR++ ++ IVAL+A S D N++D C SG++ + KP+ Sbjct: 989 DIQMPNLDGIESTRLIRQMGCSA---PIVALSAFSEDSNIKD-CMNSGMDMFISKPIRRP 1044 Query: 231 AL 226 AL Sbjct: 1045 AL 1046
>EVGS_ECO57 (P58402) Sensor protein evgS precursor (EC 2.7.13.3)| Length = 1197 Score = 35.4 bits (80), Expect = 0.033 Identities = 23/61 (37%), Positives = 33/61 (54%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRKLRSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPVTLAA 229 D+ M +DGFE+ RKLR + I L A++ N R++ G+N L KP+TL Sbjct: 1009 DVNMPNVDGFELT---RKLREQNSSLPIWGLTANAQANEREKGLNCGMNLCLFKPLTLDV 1065 Query: 228 L 226 L Sbjct: 1066 L 1066
>RCSC_ECOLI (P14376) Sensor kinase protein rcsC (EC 2.7.13.3) (Capsular synthesis| regulator component C) Length = 949 Score = 35.0 bits (79), Expect = 0.042 Identities = 20/58 (34%), Positives = 33/58 (56%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRKLRSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPVTL 235 D+ M MDG+ + IR+L + P ++ + A++ + RC SG++ L KPVTL Sbjct: 875 DVNMPNMDGYRLTQRIRQL-GLTLP--VIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>MAK2_SCHPO (O14002) Peroxide stress-activated histidine kinase mak2 (EC| 2.7.13.3) (Mcs4-associated kinase 2) (His-Asp phosphorelay kinase phk1) Length = 2310 Score = 32.3 bits (72), Expect = 0.28 Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 3/68 (4%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRKL-RSN--SWPPLIVALAASSDDNVRDRCQRSGINGLLQKPVT 238 D M DG E + IR R N S P ++AL A + + RC G+N L KP T Sbjct: 2232 DYHMPIRDGAEAVMDIRAYERENNCSTPIPVIALTADIQKSAKQRCLEVGMNFYLTKPFT 2291 Query: 237 LAALGDEV 214 L + V Sbjct: 2292 QKQLVNAV 2299
>RPFG_XANC8 (Q4UU85) Response regulator rpfG| Length = 378 Score = 32.0 bits (71), Expect = 0.36 Identities = 21/70 (30%), Positives = 33/70 (47%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRKLRSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPVTLAA 229 D M MDG E A +R+L S+ P+I+ + D+ +R +G+ L KP+ Sbjct: 80 DYRMPGMDGLEFARRLRRLPSHRDIPIIL-ITIVGDEPIRQAALEAGVIDFLVKPIRPRE 138 Query: 228 LGDEVYRVLQ 199 L +LQ Sbjct: 139 LRARCSNLLQ 148
>RPFC_XANCP (P0C0F6) Sensory/regulatory protein rpfC (EC 2.7.13.3)| Length = 677 Score = 31.6 bits (70), Expect = 0.47 Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 2/65 (3%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRKLRSNS--WPPLIVALAASSDDNVRDRCQRSGINGLLQKPVTL 235 DL M M+G ++ +R ++++ + P++V A + + +R C+++G L KPV Sbjct: 463 DLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIR-ACEQAGARAFLAKPVVA 521 Query: 234 AALGD 220 A L D Sbjct: 522 AKLLD 526
>RPFC_XANC8 (P0C0F7) Sensory/regulatory protein rpfC (EC 2.7.13.3)| Length = 677 Score = 31.2 bits (69), Expect = 0.61 Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 2/65 (3%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRKLRSNS--WPPLIVALAASSDDNVRDRCQRSGINGLLQKPVTL 235 DL M M+G ++ +R ++++ + P++V A + + +R C+++G L KPV Sbjct: 463 DLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIR-ACEQAGARAFLAKPVLA 521 Query: 234 AALGD 220 A L D Sbjct: 522 AKLLD 526
>MURC_SYNPX (Q7UA71) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)| (UDP-N-acetylmuramoyl-L-alanine synthetase) Length = 467 Score = 30.8 bits (68), Expect = 0.80 Identities = 18/63 (28%), Positives = 27/63 (42%) Frame = +1 Query: 217 FISQGRQCDGLLEQPVYSRPLAPVPDIVVRARCQGHDQRRPAVAPQLADRQGHLEPVHRV 396 F S + CD LL PVYS P+ + + + +P + +AD HL + R Sbjct: 383 FASALQNCDSLLLAPVYSAGEEPLKGVCSQTLADRIQELKPDLEIAVADNLDHLTQLVRT 442 Query: 397 HGQ 405 Q Sbjct: 443 RSQ 445
>MCS4_SCHPO (P87323) Response regulator mcs4 (Mitotic catastrophe suppressor 4)| Length = 522 Score = 30.4 bits (67), Expect = 1.0 Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 25/90 (27%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRKLR-----------------------SNSW--PPLIVALAASS 304 D+ + TM G EV IR+L N + P +IVAL ASS Sbjct: 412 DIQLPTMSGIEVTQEIRRLERLNAIGVGAPKLTQPIPEKDQLNENKFQSPVIIVALTASS 471 Query: 303 DDNVRDRCQRSGINGLLQKPVTLAALGDEV 214 R+ +G N L KPV+L L ++ Sbjct: 472 LMADRNEALAAGCNDFLTKPVSLVWLEKKI 501
>SILP_SALTY (Q9ZHC7) Putative cation-transporting P-type ATPase (EC 3.6.3.-)| Length = 824 Score = 30.4 bits (67), Expect = 1.0 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 6/59 (10%) Frame = -2 Query: 333 PLIVALAASSDDNVRDRCQRSGINGLLQKPVTLAALGDEVYRVL------QHN*WLWCL 175 PL+ + + D +RD +R + LL PV + +G ++ L Q+N WL L Sbjct: 147 PLVATASTGTSDELRDMTRRFWLGLLLAFPVLILEMGSHLFPALRNTVPPQYNTWLQLL 205
>TOPB1_MOUSE (Q6ZQF0) DNA topoisomerase II-binding protein 1 (DNA topoisomerase| IIbeta-binding protein 1) (TopBP1) Length = 1515 Score = 30.0 bits (66), Expect = 1.4 Identities = 19/47 (40%), Positives = 22/47 (46%) Frame = +1 Query: 253 EQPVYSRPLAPVPDIVVRARCQGHDQRRPAVAPQLADRQGHLEPVHR 393 E PV RPL P P +A +P VAPQ AD+ E HR Sbjct: 1216 EPPVAERPLIPEP----QAPAVASPLAKPPVAPQPADKIETQEETHR 1258
>FGD6_HUMAN (Q6ZV73) FYVE, RhoGEF and PH domain-containing protein 6 (Zinc| finger FYVE domain-containing protein 24) Length = 1430 Score = 30.0 bits (66), Expect = 1.4 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +1 Query: 274 PLAPVPDIVVRARCQGHDQRRPAVAPQ 354 P+AP PDIV+ + Q + +PA+AP+ Sbjct: 29 PIAPKPDIVISSVPQSTKKMKPAIAPK 55
>ARR3_ARATH (Q9ZWS9) Two-component response regulator ARR3| Length = 231 Score = 30.0 bits (66), Expect = 1.4 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRKLRSNSWPPLIVALAASSDDNVR---DRCQRSGINGLLQKPVT 238 D M M G+E+ I++ S P+++ S +NV DRC G L KPV Sbjct: 94 DYCMPGMTGYELLKKIKESTSFKEVPVVIM----SSENVMTRIDRCLEEGAEDFLLKPVK 149 Query: 237 LA 232 LA Sbjct: 150 LA 151
>DGAT1_RAT (Q9ERM3) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)| (Diglyceride acyltransferase) Length = 498 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = -1 Query: 382 VRGGPGDPQVEEQQLAAADRGPGSELGRQCPGPVPAVGNKR 260 V+GG G P+VEE ++ A P G P P PA + R Sbjct: 21 VQGGSG-PKVEEDEVREAAVSPDLGAGGDAPAPAPAPAHTR 60
>CDX2_MESAU (Q04649) Homeobox protein CDX-2 (Caudal-type homeobox protein 2)| Length = 313 Score = 29.3 bits (64), Expect = 2.3 Identities = 16/43 (37%), Positives = 18/43 (41%) Frame = +3 Query: 171 HRDTTTISCAEGLYTLHLPGPPM*RASGAARLFPTAGTGPGHC 299 H SCA GL PGPP A+GAA +G C Sbjct: 123 HHPAAAPSCASGLLQTLNPGPPGPAATGAAEQLSPSGQRRNLC 165
>SSK1_YEAST (Q07084) Osomolarity two-component system protein SSK1| Length = 712 Score = 29.3 bits (64), Expect = 2.3 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = -2 Query: 351 RSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPVTLAALGDEV 214 R + P +IVAL AS+ + + SG N L KPV L L ++ Sbjct: 598 RFSQAPVIIVALTASNSQMDKRKALLSGCNDYLTKPVNLHWLSKKI 643
>DGAT1_MOUSE (Q9Z2A7) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)| (Diglyceride acyltransferase) Length = 498 Score = 29.3 bits (64), Expect = 2.3 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = -1 Query: 382 VRGGPGDPQVEEQQLAAADRGPGSELGRQCPGPVPAVGNKR 260 V+GG G P+VEE ++ A P G P P PA + R Sbjct: 21 VQGGSG-PKVEEDEVRDAAVSPDLGAGGDAPAPAPAPAHTR 60
>HPS6_HUMAN (Q86YV9) Hermansky-Pudlak syndrome 6 protein (Ruby-eye protein| homolog) (Ru) Length = 775 Score = 29.3 bits (64), Expect = 2.3 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 8/45 (17%) Frame = -1 Query: 385 RVRGGPGD--------PQVEEQQLAAADRGPGSELGRQCPGPVPA 275 RVRG P P QL A RGPG+EL R P P+ Sbjct: 33 RVRGSPDGRHLLLLRPPGAVAPQLLVASRGPGAELERAWPAGQPS 77
>SORC2_MOUSE (Q9EPR5) VPS10 domain-containing receptor SorCS2 precursor| Length = 1159 Score = 28.9 bits (63), Expect = 3.0 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 3/51 (5%) Frame = -1 Query: 388 GRVRGGPG-DPQVEEQQLAAADRGPGSELGRQCPG-PVPAVGNK-RAAPEA 245 GR G DPQ E + + GPGS G G P P G + RA P A Sbjct: 72 GRTESGDRKDPQARESEPSVPGLGPGSASGPSTDGAPAPGKGRRARAVPVA 122
>TCTD_SALTY (P22104) Transcriptional regulatory protein tctD| Length = 224 Score = 28.9 bits (63), Expect = 3.0 Identities = 21/72 (29%), Positives = 34/72 (47%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRKLRSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPVTLAA 229 D+ M MDG EV +RK R + P L++ ++ D V+ G + L KP L Sbjct: 51 DINMPGMDGLEVVQRLRK-RGQTLPVLLLTARSAVADRVKG--LNVGADDYLPKPFELEE 107 Query: 228 LGDEVYRVLQHN 193 L + +L+ + Sbjct: 108 LDARLRALLRRS 119
>NUAM_NEUCR (P24918) NADH-ubiquinone oxidoreductase 78 kDa subunit,| mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-78KD) (CI-78KD) Length = 744 Score = 28.9 bits (63), Expect = 3.0 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = -3 Query: 233 RPWEMKCIESFSTTDGCGVSVDLD 162 RPWE+K ES DG G ++ +D Sbjct: 247 RPWELKKTESIDVLDGLGSNIRVD 270
>ARR4_ARATH (O82798) Two-component response regulator ARR4 (Response regulator| 1) Length = 259 Score = 28.5 bits (62), Expect = 4.0 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRKLRSNSWPPLIVALAASSDDNVR---DRCQRSGINGLLQKPVT 238 D M M G+E+ I++ + P+++ S +NV DRC G L KPV Sbjct: 95 DYCMPGMTGYELLKKIKESSNFREVPVVIM----SSENVLTRIDRCLEEGAQDFLLKPVK 150 Query: 237 LAALGDEVYRVLQH 196 LA +V R+ H Sbjct: 151 LA----DVKRLRSH 160
>UL61_HCMVA (P16818) Hypothetical protein UL61| Length = 431 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 10/59 (16%) Frame = -1 Query: 388 GRVRGGPGDPQVEEQQLAAADRGPGSEL----GRQCPGP------VPAVGNKRAAPEAR 242 G RGG G P + + +R PG+ + GR+ G P G +RAAP AR Sbjct: 265 GEERGGGGKPPLGSPRATDGNRDPGAGVPARPGRRMGGSSGGRGGTPGRGPERAAPGAR 323
>CBLB_RAT (Q8K4S7) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) Length = 938 Score = 28.5 bits (62), Expect = 4.0 Identities = 16/47 (34%), Positives = 19/47 (40%) Frame = -1 Query: 379 RGGPGDPQVEEQQLAAADRGPGSELGRQCPGPVPAVGNKRAAPEARH 239 R PGD + D+ P S G Q P P +R APE H Sbjct: 829 RRAPGDGVKSNRASQDYDQLPSSSDGSQAPARPPKPRPRRTAPEIHH 875
>GACS_PSESY (P48027) Sensor protein gacS (EC 2.7.13.3)| Length = 907 Score = 28.5 bits (62), Expect = 4.0 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 3/70 (4%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRKL---RSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPVT 238 D+ M MDG + AIR R+ S P IVAL A + N + +SG++ L KP++ Sbjct: 707 DVQMPGMDGRQATEAIRAWEAERNQSSLP-IVALTAHAMANEKRSLLQSGMDDYLTKPIS 765 Query: 237 LAALGDEVYR 208 L V + Sbjct: 766 ERQLAQVVLK 775
>JPH2_RABIT (Q9GKY7) Junctophilin-2 (Junctophilin type 2) (JP-2)| Length = 694 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 2/52 (3%) Frame = -1 Query: 394 HDGRVRGGPGDPQV--EEQQLAAADRGPGSELGRQCPGPVPAVGNKRAAPEA 245 H VR P P ++ Q AAD PG PA+GN APE+ Sbjct: 569 HSYAVRTAPPAPPPFEDDPQPEAADPDSAPASPATAPGQAPALGNPEPAPES 620
>ARR5_ARATH (Q9SB04) Two-component response regulator ARR5 (Response reactor 2)| Length = 184 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRKLRSNSWPPLIVALAASSDDNVR-DRCQRSGINGLLQKPVTLA 232 D +M M G+E+ I++ S+++ + V + +S + R DRC G L KPV LA Sbjct: 87 DYSMPGMTGYELLKKIKE--SSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLA 144
>MGR6_HUMAN (O15303) Metabotropic glutamate receptor 6 precursor (mGluR6)| Length = 877 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = -1 Query: 325 RGPGSELGRQCPGPVPAVGNKRAAPEAR 242 RG G E+G +CPG VP + R AP R Sbjct: 120 RGDGDEVGVRCPGGVPPL---RPAPPER 144
>DPOLQ_HUMAN (O75417) DNA polymerase theta (EC 2.7.7.7) (DNA polymerase eta)| Length = 1762 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = -2 Query: 303 DDNVRDRCQRSGINGLLQKPVTLAALGDEVYRVL 202 D NV C+R +N KP ALGD++ R + Sbjct: 402 DSNVTINCERIKLNTEENKPSHFQALGDDISRTV 435
>COCA1_CHICK (P13944) Collagen alpha-1(XII) chain precursor (Fibrochimerin)| Length = 3124 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/53 (32%), Positives = 24/53 (45%) Frame = -1 Query: 409 RPDHAHDGRVRGGPGDPQVEEQQLAAADRGPGSELGRQCPGPVPAVGNKRAAP 251 RP V+G PG+ + ++ +RG GS+ R PGP G R P Sbjct: 2968 RPGFPGPPGVQGPPGERGMPGEK---GERGTGSQGPRGLPGPPGPQGESRTGP 3017
>URE1_NOCFA (Q5YWR8) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase| alpha subunit) Length = 573 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = +1 Query: 193 VVLKDSIHFISQGRQCDGLLEQPVYSRPLAPVPDI 297 V S+HF+S+ DGL E+ R L V D+ Sbjct: 489 VAAATSLHFVSEHALADGLAERLAVRRKLVAVKDV 523
>GLPF_STRCO (P19255) Probable glycerol uptake facilitator protein| Length = 264 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = -1 Query: 400 HAHDGRVRGGPGDPQVEEQQLAAADRGPGSELGRQCPGP 284 H D + GGPG + + A ++G G LG GP Sbjct: 113 HLTDREIVGGPGAQDTTAKSVEAQEKGAGPVLGVFSTGP 151
>BVGS_BORPA (P40330) Virulence sensor protein bvgS precursor (EC 2.7.13.3)| Length = 1238 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 7/68 (10%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRKLRSNSWPP-------LIVALAASSDDNVRDRCQRSGINGLLQ 250 D M ++G+E+A R++R+ P ++ AS+ + RC+ +G++ L Sbjct: 1023 DCNMPGINGYELA---RRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDDCLF 1079 Query: 249 KPVTLAAL 226 KP+ + AL Sbjct: 1080 KPIGVDAL 1087
>BVGS_BORBR (P26762) Virulence sensor protein bvgS precursor (EC 2.7.13.3)| Length = 1238 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 7/68 (10%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRKLRSNSWPP-------LIVALAASSDDNVRDRCQRSGINGLLQ 250 D M ++G+E+A R++R+ P ++ AS+ + RC+ +G++ L Sbjct: 1023 DCNMPGINGYELA---RRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDDCLF 1079 Query: 249 KPVTLAAL 226 KP+ + AL Sbjct: 1080 KPIGVDAL 1087
>PER1_MOUSE (O35973) Period circadian protein 1 (Circadian pacemaker protein| Rigui) (mPER) (M-Rigui) Length = 1291 Score = 27.7 bits (60), Expect = 6.8 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 10/54 (18%) Frame = -1 Query: 373 GPGDPQVEEQQLAAADRGPGSELGRQCPGPVPA----------VGNKRAAPEAR 242 G GDP+ E PG+ R CPGP A GN+ PE+R Sbjct: 10 GGGDPRPGEPFCPGGVPSPGAPQHRPCPGPSLADDTDANSNGSSGNESNGPESR 63
>ARR6_ARATH (Q9ZWS6) Two-component response regulator ARR6| Length = 186 Score = 27.3 bits (59), Expect = 8.9 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRKLRSNSWPPLIVALAASSDDNVR---DRCQRSGINGLLQKPVT 238 D +M M G+E+ I++ + P+++ S +N+ DRC G L KPV Sbjct: 86 DYSMPGMTGYELLKKIKESSAFREVPVVIM----SSENILPRIDRCLEEGAEDFLLKPVK 141 Query: 237 LA 232 L+ Sbjct: 142 LS 143
>DDX54_MOUSE (Q8K4L0) ATP-dependent RNA helicase DDX54 (EC 3.6.1.-) (DEAD box| protein 54) Length = 874 Score = 27.3 bits (59), Expect = 8.9 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 8/52 (15%) Frame = -1 Query: 373 GPGDP-------QVEEQQLAAADRGPGSEL-GRQCPGPVPAVGNKRAAPEAR 242 GP DP Q EE+++ G +E+ G++ P P P+ G KR E R Sbjct: 615 GPADPAPQRELPQEEEEEMVETVEGVFTEVVGQKRPRPGPSQGAKRRRMETR 666
>BVGS_BORPE (P16575) Virulence sensor protein bvgS precursor (EC 2.7.13.3)| Length = 1238 Score = 27.3 bits (59), Expect = 8.9 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 7/68 (10%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRKLRSNSWPP-------LIVALAASSDDNVRDRCQRSGINGLLQ 250 D M + G+E+A R++R+ P ++ AS+ + RC+ +G++ L Sbjct: 1023 DCNMPGISGYELA---RRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDDCLF 1079 Query: 249 KPVTLAAL 226 KP+ + AL Sbjct: 1080 KPIGVDAL 1087
>GLGL3_WHEAT (P12300) Glucose-1-phosphate adenylyltransferase large subunit,| chloroplast precursor (EC 2.7.7.27) (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (AGPase S) (Alpha-D-glucose-1-phosphate adenyl transferase) (Fragment) Length = 500 Score = 27.3 bits (59), Expect = 8.9 Identities = 10/26 (38%), Positives = 14/26 (53%) Frame = +2 Query: 11 SPPFLPQRNQAKCTIPSFLFVHKCFM 88 SP +LP KC I + +H CF+ Sbjct: 366 SPRYLPPTKSDKCRIKEAIILHGCFL 391
>ARR16_ARATH (Q9SHC2) Two-component response regulator ARR16| Length = 164 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/59 (25%), Positives = 30/59 (50%) Frame = -2 Query: 408 DLTMHTMDGFEVALAIRKLRSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPVTLA 232 D M M GFE+ +++ + P+++ + + + ++C SG +QKP+ LA Sbjct: 93 DYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRI-NKCLASGAQMFMQKPLKLA 150
>Y1270_CORGL (P42531) Hypothetical protein Cgl1270/cg1434| Length = 491 Score = 27.3 bits (59), Expect = 8.9 Identities = 11/41 (26%), Positives = 23/41 (56%) Frame = +2 Query: 236 NVTGFWSSPFIPDRWHRSRTLSSELAARATISGGQLLLLNL 358 ++ GF+ + + P+RW + + + ++ G LLLL+L Sbjct: 334 SLRGFFRTDYYPNRWQKILSFGGRVRMSTSLLLGALLLLSL 374
>COL2_CAEEL (P17656) Cuticle collagen 2 precursor| Length = 301 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/40 (40%), Positives = 17/40 (42%) Frame = -1 Query: 376 GGPGDPQVEEQQLAAADRGPGSELGRQCPGPVPAVGNKRA 257 GGPG+P EQ GPG PGP GN A Sbjct: 204 GGPGEPGASEQG------GPGEPGPAGPPGPAGPAGNDGA 237
>CECR6_MOUSE (Q99MX7) Cat eye syndrome critical region protein 6 homolog| Length = 572 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = -2 Query: 357 KLRSNSWPPLIVALAASSDDNVRDRCQRSGINGLLQKPVTLAALGDEVYRVL 202 +L +S PPL ++ AAS+ + R R G G P T A G+ + L Sbjct: 261 QLHHHSAPPLHLSAAASAGAGAKARGGRGGSGGSGAGPGTTGAAGEFAFAYL 312 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,596,145 Number of Sequences: 219361 Number of extensions: 1253540 Number of successful extensions: 4035 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 3857 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4028 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
