ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl56f04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 77.8 bits (39), Expect = 2e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 314 tcaaggtgaccattggtcggggacagtcaggaagtactttgacatggccttcctg 368 ||||| |||||||||||| |||||||||||||||||| | ||||||||||||||| Sbjct: 8328902 tcaagatgaccattggtcagggacagtcaggaagtacctcgacatggccttcctg 8328956
>dbj|AP005527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0603C10 Length = 187620 Score = 77.8 bits (39), Expect = 2e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 314 tcaaggtgaccattggtcggggacagtcaggaagtactttgacatggccttcctg 368 ||||| |||||||||||| |||||||||||||||||| | ||||||||||||||| Sbjct: 122407 tcaagatgaccattggtcagggacagtcaggaagtacctcgacatggccttcctg 122461
>ref|XM_482503.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4893 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 321 gaccattggtcggggacagtcaggaagtactttgacatggccttcctg 368 ||||| || |||||||| || |||||||||||||||||||| |||||| Sbjct: 4886 gaccactgatcggggacggtgaggaagtactttgacatggctttcctg 4839
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 321 gaccattggtcggggacagtcaggaagtactttgacatggccttcctg 368 ||||| || |||||||| || |||||||||||||||||||| |||||| Sbjct: 20659333 gaccactgatcggggacggtgaggaagtactttgacatggctttcctg 20659380
>dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1663_D06 Length = 139103 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 321 gaccattggtcggggacagtcaggaagtactttgacatggccttcctg 368 ||||| || |||||||| || |||||||||||||||||||| |||||| Sbjct: 133705 gaccactgatcggggacggtgaggaagtactttgacatggctttcctg 133752
>dbj|AK120080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013012I05, full insert sequence Length = 5569 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 321 gaccattggtcggggacagtcaggaagtactttgacatggccttcctg 368 ||||| || |||||||| || |||||||||||||||||||| |||||| Sbjct: 5235 gaccactgatcggggacggtgaggaagtactttgacatggctttcctg 5188
>dbj|AP004617.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0479C08 Length = 152460 Score = 56.0 bits (28), Expect = 8e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 321 gaccattggtcggggacagtcaggaagtactttgacatggccttcctg 368 ||||| || |||||||| || |||||||||||||||||||| |||||| Sbjct: 31786 gaccactgatcggggacggtgaggaagtactttgacatggctttcctg 31833
>gb|AY112489.1| Zea mays CL31817_1 mRNA sequence Length = 600 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 318 ggtgaccattggtcggggacagtcaggaagtactttgacatggccttcctg 368 |||||||||||||| || | || || ||||||||| ||||||||||||||| Sbjct: 265 ggtgaccattggtcaggaagagccaagaagtacttggacatggccttcctg 315
>gb|AC124515.4| Mus musculus BAC clone RP23-381E19 from chromosome 13, complete sequence Length = 175354 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 56 atttgttatatataatatacacatat 81 ||||||||||||| |||||||||||| Sbjct: 95818 atttgttatatattatatacacatat 95843
>emb|AL591718.14| Human DNA sequence from clone RP11-399A15 on chromosome 6 Contains the 5' end of HCRTR2 gene for hypocretin (orexin) receptor 2, complete sequence Length = 159698 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Plus Query: 216 agagaaaaacgaagaaaacaat 237 |||||||||||||||||||||| Sbjct: 46141 agagaaaaacgaagaaaacaat 46162
>gb|AC156575.3| Mus musculus BAC clone RP23-4P20 from chromosome 13, complete sequence Length = 196560 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 56 atttgttatatataatatacacatat 81 ||||||||||||| |||||||||||| Sbjct: 178990 atttgttatatattatatacacatat 179015
>gb|AC090049.17| Homo sapiens 12 BAC RP11-587P21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 105977 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Minus Query: 56 atttgttatatataatatacacatat 81 ||||||| |||||||||||||||||| Sbjct: 57807 atttgttgtatataatatacacatat 57782
>gb|AC016717.8| Homo sapiens BAC clone RP11-314B1 from 2, complete sequence Length = 210558 Score = 44.1 bits (22), Expect = 0.31 Identities = 25/26 (96%) Strand = Plus / Plus Query: 56 atttgttatatataatatacacatat 81 ||||||||||||||||||||| |||| Sbjct: 73734 atttgttatatataatatacatatat 73759
>gb|AC102466.11| Mus musculus chromosome 3, clone RP24-337A2, complete sequence Length = 164455 Score = 44.1 bits (22), Expect = 0.31 Identities = 22/22 (100%) Strand = Plus / Minus Query: 55 catttgttatatataatataca 76 |||||||||||||||||||||| Sbjct: 18197 catttgttatatataatataca 18176
>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome Length = 1838554 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 209 caaaaccagagaaaaacgaagaaaa 233 |||||||||||||||| |||||||| Sbjct: 1615324 caaaaccagagaaaaaagaagaaaa 1615300
>gb|AC139062.10| Mus musculus chromosome 17, clone RP23-69L11, complete sequence Length = 136224 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 5852 ttatatataatatacacatat 5872
>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome Length = 1899877 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 209 caaaaccagagaaaaacgaagaaaa 233 |||||||||||||||| |||||||| Sbjct: 1666341 caaaaccagagaaaaaagaagaaaa 1666317
>gb|AE006618.1| Streptococcus pyogenes M1 GAS, section 147 of 167 of the complete genome Length = 11216 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 209 caaaaccagagaaaaacgaagaaaa 233 |||||||||||||||| |||||||| Sbjct: 1639 caaaaccagagaaaaaagaagaaaa 1615
>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome Length = 1937111 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 209 caaaaccagagaaaaacgaagaaaa 233 |||||||||||||||| |||||||| Sbjct: 1700807 caaaaccagagaaaaaagaagaaaa 1700783
>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome Length = 1860355 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 209 caaaaccagagaaaaacgaagaaaa 233 |||||||||||||||| |||||||| Sbjct: 1632349 caaaaccagagaaaaaagaagaaaa 1632325
>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome Length = 1928252 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 209 caaaaccagagaaaaacgaagaaaa 233 |||||||||||||||| |||||||| Sbjct: 1670801 caaaaccagagaaaaaagaagaaaa 1670777
>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome Length = 1836467 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 209 caaaaccagagaaaaacgaagaaaa 233 |||||||||||||||| |||||||| Sbjct: 1608463 caaaaccagagaaaaaagaagaaaa 1608439
>gb|AC162527.5| Mus musculus BAC clone RP23-30M17 from chromosome 14, complete sequence Length = 200348 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 76268 ttatatataatatacacatat 76288
>gb|AC129083.4| Mus musculus chromosome 6 clone RP23-9E15, complete sequence Length = 193732 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 208 acaaaaccagagaaaaacgaagaaa 232 |||||||||||||||||| |||||| Sbjct: 40440 acaaaaccagagaaaaacaaagaaa 40464
>gb|AC073054.2| Homo sapiens BAC clone RP11-106F1 from 7, complete sequence Length = 154419 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 92442 ttatatataatatacacatat 92462 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 92491 tatatataatatacacatat 92510 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 92402 tatatataatatacacatat 92421
>gb|AC123985.10| Mus musculus chromosome 14, clone RP23-154G18, complete sequence Length = 229313 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 215852 ttatatataatatacacatat 215832
>gb|AC127272.4| Mus musculus BAC clone RP24-63G5 from chromosome 18, complete sequence Length = 182591 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 101877 ttatatataatatacacatat 101897
>emb|CR394563.17| Zebrafish DNA sequence from clone CH211-147P18, complete sequence Length = 165013 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 ttgttatatataatatacaca 78 ||||||||||||||||||||| Sbjct: 40437 ttgttatatataatatacaca 40417
>gb|AC115290.5| Mus musculus BAC clone RP23-65M10 from chromosome 10, complete sequence Length = 245623 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 216369 ttatatataatatacacatat 216389
>gb|AC006044.2| Homo sapiens BAC clone RP11-539B24 from 7, complete sequence Length = 141509 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 135051 ttatatataatatacacatat 135071
>gb|AC109217.7| Mus musculus chromosome 18, clone RP23-406P18, complete sequence Length = 196301 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 38933 ttatatataatatacacatat 38953
>gb|AC142300.1| Pan troglodytes BAC clone RP43-127J18 from 7, complete sequence Length = 142598 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 141469 ttatatataatatacacatat 141489 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 141443 tatatataatatacacatat 141462 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 141410 tatatataatatacacatat 141429 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 141415 tatatataatatacacatat 141396
>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome Length = 1897573 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 209 caaaaccagagaaaaacgaagaaaa 233 |||||||||||||||| |||||||| Sbjct: 1645354 caaaaccagagaaaaaagaagaaaa 1645330
>emb|AL356137.10| Human DNA sequence from clone RP11-515I12 on chromosome 6, complete sequence Length = 135837 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 89482 ttatatataatatacacatat 89502
>emb|AL161798.23| Human DNA sequence from clone RP11-108M11 on chromosome 10 Contains the 3' end of a novel gene (FLJ37306), a novel gene and a ribosomal protein S27 (metallopanstimulin 1) (RPS27) pseudogene, complete sequence Length = 134438 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 86021 ttatatataatatacacatat 86001
>gb|AC099525.5| Papio anubis clone RP41-277O17, complete sequence Length = 163567 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 102842 ttatatataatatacacatat 102862
>emb|AL139393.13| Human DNA sequence from clone RP3-428L16 on chromosome 6q26-27 Contains part of a novel gene and the 5' end of the MAP3K4 gene for mitogen-activated protein kinase kinase kinase 4 (MTK1, MEKK4, MAPKKK4, KIAA0213, homolog of yeast SSK2/SSK22 MAP kinase kinase kinase). Contains a CpG island, complete sequence Length = 85624 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 68114 ttatatataatatacacatat 68134
>gb|AC016942.13| Homo sapiens 3 BAC RP11-536K4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152014 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 37171 ttatatataatatacacatat 37151
>gb|AC124918.5| Rattus norvegicus 4 BAC CH230-4H1 (Children's Hospital Oakland Research Institute) complete sequence Length = 228052 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 attcctctgcatttcatttcatgtt 45 |||||| |||||||||||||||||| Sbjct: 66374 attcctttgcatttcatttcatgtt 66350
>emb|CR382399.1| Plasmodium falciparum chromosome 6, complete sequence; segment 2/5 Length = 348174 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 95984 ttatatataatatacacatat 96004
>gb|AC163012.4| Mus musculus chromosome 8, clone RP23-22A17, complete sequence Length = 211779 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 188876 ttatatataatatacacatat 188896
>gb|AC119566.11| Homo sapiens 12 BAC RP11-41H6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 70009 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 54715 ttatatataatatacacatat 54735
>emb|CR391924.9| Zebrafish DNA sequence from clone CH211-135F11 in linkage group 5, complete sequence Length = 142997 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 3005 ttatatataatatacacatat 3025
>gb|AC114806.5| Homo sapiens BAC clone RP11-1251F13 from 4, complete sequence Length = 138121 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 gttatatataatatacacata 80 ||||||||||||||||||||| Sbjct: 121136 gttatatataatatacacata 121116
>gb|AC099339.6| Homo sapiens BAC clone RP11-206F17 from 4, complete sequence Length = 123182 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 55 catttgttatatataatatacacat 79 ||||||||||||||| ||||||||| Sbjct: 54549 catttgttatatatattatacacat 54573
>gb|AC011539.7| Homo sapiens chromosome 19 clone LLNLR-253C9, complete sequence Length = 41220 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 14244 ttatatataatatacacatat 14224
>gb|AC009986.10| Homo sapiens chromosome 10 clone RP11-346D6, complete sequence Length = 181733 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 75120 ttatatataatatacacatat 75100
>gb|AC113559.3| Homo sapiens chromosome 18, clone RP11-114J15, complete sequence Length = 145274 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 57435 ttatatataatatacacatat 57455
>gb|AE010105.1| Streptococcus pyogenes strain MGAS8232, section 153 of 173 of the complete genome Length = 11158 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 209 caaaaccagagaaaaacgaagaaaa 233 |||||||||||||||| |||||||| Sbjct: 1518 caaaaccagagaaaaaagaagaaaa 1494
>gb|AC083760.5| Homo sapiens chromosome 18, clone CTD-388D15, complete sequence Length = 109851 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 5391 ttatatataatatacacatat 5371
>gb|AC022821.9| Homo sapiens chromosome 8, clone RP11-51M18, complete sequence Length = 171721 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 84544 ttatatataatatacacatat 84564
>gb|DP000032.1| Felis catus target 116 genomic scaffold Length = 376810 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 68776 ttatatataatatacacatat 68756
>gb|AC016879.6| Homo sapiens chromosome 8, clone RP11-97P19, complete sequence Length = 182556 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 4931 ttatatataatatacacatat 4911
>gb|AC161265.2| Mus musculus BAC clone RP23-271F18 from chromosome 9, complete sequence Length = 203839 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 129099 ttatatataatatacacatat 129079
>gb|AC159331.9| Mus musculus 10 BAC RP23-218E2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 186300 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 tgttatatataatatacacat 79 ||||||||||||||||||||| Sbjct: 18085 tgttatatataatatacacat 18105
>gb|AC146077.4| Pan troglodytes BAC clone RP43-45A15 from chromosome 7, complete sequence Length = 188174 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 140933 ttatatataatatacacatat 140913 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 140985 tatatataatatacacatat 141004 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 140990 tatatataatatacacatat 140971 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 140959 tatatataatatacacatat 140940
>gb|AC154685.2| Mus musculus BAC clone RP24-321G16 from chromosome 17, complete sequence Length = 162362 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 27886 ttatatataatatacacatat 27866
>gb|AC143330.4| Mus musculus BAC clone RP23-263D5 from chromosome 6, complete sequence Length = 207749 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 208 acaaaaccagagaaaaacgaagaaa 232 |||||||||||||||||| |||||| Sbjct: 11386 acaaaaccagagaaaaacaaagaaa 11362
>gb|AC007677.3| Homo sapiens BAC clone RP11-86N1 from 2, complete sequence Length = 166949 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 158109 ttatatataatatacacatat 158089
>gb|AC016562.7| Homo sapiens chromosome 5 clone CTC-484A9, complete sequence Length = 185774 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 65025 ttatatataatatacacatat 65005
>gb|AC009567.8|AC009567 Homo sapiens chromosome 4, clone RP11-21G20, complete sequence Length = 164823 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatatc 82 ||||||||||||||||||||| Sbjct: 74570 tatatataatatacacatatc 74590
>gb|AC112947.8| Mus musculus chromosome 8, clone RP23-375F22, complete sequence Length = 191154 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 112887 ttatatataatatacacatat 112867
>gb|U94967.1|LBU94967 Leishmania braziliensis M2903 250kb minichromosome GENE53 pseudogene, complete sequence and GTP-binding protein homolog (lgp2) gene, complete cds Length = 7229 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 200 tcaccctaacaaaaccagagaaaaa 224 ||||||||| ||||||||||||||| Sbjct: 2330 tcaccctaagaaaaccagagaaaaa 2306
>emb|CR974430.11| Mouse DNA sequence from clone RP23-373C24 on chromosome 17, complete sequence Length = 199120 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 caaaaataacatacaaaaggc 183 ||||||||||||||||||||| Sbjct: 91667 caaaaataacatacaaaaggc 91687
>gb|AC165153.2| Mus musculus BAC clone RP23-359L1 from chromosome 17, complete sequence Length = 219548 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 163940 ttatatataatatacacatat 163920
>gb|AC153958.2| Mus musculus 10 BAC RP24-541B4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 176618 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 59 tgttatatataatatacacat 79 ||||||||||||||||||||| Sbjct: 50465 tgttatatataatatacacat 50445
>emb|AL773538.7| Mouse DNA sequence from clone RP23-14I24 on chromosome 2, complete sequence Length = 178544 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 26924 ttatatataatatacacatat 26944
>emb|AL359352.21| Mouse DNA sequence from clone CT7-350K7 on chromosome 17, complete sequence Length = 162935 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 caaaaataacatacaaaaggc 183 ||||||||||||||||||||| Sbjct: 6768 caaaaataacatacaaaaggc 6788
>gb|AC162179.2| Mus musculus BAC clone RP23-197K11 from chromosome 9, complete sequence Length = 210741 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 ttatatataatatacacatat 81 ||||||||||||||||||||| Sbjct: 42914 ttatatataatatacacatat 42894
>gb|AC110907.7| Mus musculus chromosome 7, clone RP24-180J10, complete sequence Length = 179750 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 142568 tatatataatatacacatat 142587
>gb|AC108914.8| Mus musculus chromosome 1, clone RP23-435E15, complete sequence Length = 212494 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 66158 tatatataatatacacatat 66139
>ref|NM_194722.1| Oryza sativa (japonica cultivar-group) putative NBS-LRR type resistance protein (OSJNBb0072F04.19), mRNA Length = 2883 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 tcaggaagtactttgacatg 359 |||||||||||||||||||| Sbjct: 1691 tcaggaagtactttgacatg 1672
>gb|AC103941.12| Mus musculus chromosome 9, clone RP23-430I4, complete sequence Length = 172217 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 ttatatataatatacacata 80 |||||||||||||||||||| Sbjct: 161516 ttatatataatatacacata 161497
>gb|AE014835.1| Plasmodium falciparum 3D7 chromosome 10 section 7 of 7 of the complete sequence Length = 180450 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 catttgttatatataatata 74 |||||||||||||||||||| Sbjct: 57899 catttgttatatataatata 57918
>gb|AE014834.1| Plasmodium falciparum 3D7 chromosome 10 section 6 of 7 of the complete sequence Length = 253001 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 catttgttatatataatata 74 |||||||||||||||||||| Sbjct: 116538 catttgttatatataatata 116557
>gb|AE014851.1| Plasmodium falciparum 3D7 chromosome 12, section 8 of 9 of the complete sequence Length = 251762 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 198165 tatatataatatacacatat 198184
>gb|AY724492.1| Rattus norvegicus clone UI-R-FJ0-cpw-c-01-0-UI unknown mRNA Length = 2560 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 2300 tatatataatatacacatat 2281
>gb|AC107700.12| Mus musculus chromosome 3, clone RP23-288N9, complete sequence Length = 194390 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 5396 tatatataatatacacatat 5415
>gb|AC119854.7| Mus musculus chromosome 3, clone RP23-234F9, complete sequence Length = 210547 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 ttatatataatatacacata 80 |||||||||||||||||||| Sbjct: 60411 ttatatataatatacacata 60392
>gb|AC150544.3| Bos taurus BAC CH240-75C8 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 190186 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 110096 tatatataatatacacatat 110115
>gb|AC117780.5| Mus musculus chromosome 16, clone RP24-540H15, complete sequence Length = 153703 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 aaaaataacatacaaaaggc 183 |||||||||||||||||||| Sbjct: 34355 aaaaataacatacaaaaggc 34336
>gb|AC146030.3| Pan troglodytes BAC clone RP43-124E21 from chromosome 7, complete sequence Length = 169275 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 119543 tatatataatatacacatat 119524
>gb|BC034255.1| Mus musculus non-catalytic region of tyrosine kinase adaptor protein 2, mRNA (cDNA clone MGC:7093 IMAGE:3157491), complete cds Length = 2525 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 2277 tatatataatatacacatat 2258
>gb|AC146605.3| Mus musculus BAC clone RP23-304J7 from chromosome 14, complete sequence Length = 225868 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 105374 tatatataatatacacatat 105393
>gb|AC127697.3| Mus musculus chromosome 15 clone RP24-83I10, complete sequence Length = 205653 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 127887 tatatataatatacacatat 127868
>ref|XM_973478.1| PREDICTED: Mus musculus non-catalytic region of tyrosine kinase adaptor protein 2, transcript variant 2 (Nck2), mRNA Length = 2627 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 2393 tatatataatatacacatat 2374
>gb|AC132084.2| Mus musculus BAC clone RP24-544J20 from chromosome 5, complete sequence Length = 119933 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 ttatatataatatacacata 80 |||||||||||||||||||| Sbjct: 71756 ttatatataatatacacata 71737
>emb|CR376773.7| Zebrafish DNA sequence from clone CH211-23E22 in linkage group 17, complete sequence Length = 167088 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 20620 tatatataatatacacatat 20639
>emb|CT025685.5| Mouse DNA sequence from clone RP24-116B6 on chromosome 9, complete sequence Length = 173933 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ttatatataatatacacata 80 |||||||||||||||||||| Sbjct: 121517 ttatatataatatacacata 121536 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ttatatataatatacacata 80 |||||||||||||||||||| Sbjct: 47668 ttatatataatatacacata 47687
>gb|AC127594.3| Mus musculus BAC clone RP23-44G8 from chromosome 7, complete sequence Length = 209828 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 195454 tatatataatatacacatat 195435
>gb|AC124454.4| Mus musculus BAC clone RP24-228I9 from chromosome 14, complete sequence Length = 155657 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 59040 tatatataatatacacatat 59059
>gb|AC122056.4| Mus musculus BAC clone RP24-466A3 from chromosome 14, complete sequence Length = 179685 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 59573 tatatataatatacacatat 59554
>gb|AC123553.4| Mus musculus BAC clone RP24-566O21 from chromosome 3, complete sequence Length = 138553 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 69919 tatatataatatacacatat 69938
>ref|XM_815542.1| Trypanosoma cruzi strain CL Brener mucin TcMUCII (Tc00.1047053506599.70) partial mRNA Length = 582 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 accagagaaaaacgaagaaa 232 |||||||||||||||||||| Sbjct: 171 accagagaaaaacgaagaaa 190
>gb|AC127312.4| Mus musculus BAC clone RP23-306F21 from 15, complete sequence Length = 194254 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 59921 tatatataatatacacatat 59940
>ref|NM_010879.2| Mus musculus non-catalytic region of tyrosine kinase adaptor protein 2 (Nck2), mRNA Length = 2772 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 2539 tatatataatatacacatat 2520
>gb|AC117199.3| Mus musculus BAC clone RP23-134L22 from 10, complete sequence Length = 210514 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 185878 tatatataatatacacatat 185897
>gb|AC136628.2| Homo sapiens chromosome 5 clone RP11-798K23, complete sequence Length = 137132 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 aaaataacatacaaaaggcg 184 |||||||||||||||||||| Sbjct: 113163 aaaataacatacaaaaggcg 113144
>gb|AC101490.8| Mus musculus chromosome 3, clone RP23-188O2, complete sequence Length = 247848 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 ttatatataatatacacata 80 |||||||||||||||||||| Sbjct: 210106 ttatatataatatacacata 210087
>gb|AC129544.7| Mus musculus chromosome 12, clone RP23-258H6, complete sequence Length = 232275 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 185988 tatatataatatacacatat 186007
>gb|AC103645.6| Mus musculus chromosome 19, clone RP24-510J20, complete sequence Length = 209224 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 100831 tatatataatatacacatat 100850
>emb|AL391709.7| Human DNA sequence from clone RP11-442I4 on chromosome 6, complete sequence Length = 34663 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 216 agagaaaaacgaagaaaacaatgg 239 ||||||||| |||||||||||||| Sbjct: 12978 agagaaaaatgaagaaaacaatgg 12955
>emb|AL356866.22| Human DNA sequence from clone RP11-211D10 on chromosome 13 Contains a CpG island, complete sequence Length = 182321 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 83138 tatatataatatacacatat 83157
>emb|AL356269.10| Human DNA sequence from clone RP11-420J12 on chromosome 13, complete sequence Length = 141895 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 109601 tatatataatatacacatat 109620
>emb|AL160269.14| Human DNA sequence from clone RP11-240L7 on chromosome 9 Contains the 3' end of a gene for a novel protein similar to a zinc finger protein, the gene for a nucleotide-sugar transporter (SQV7L) the HSD17B3 gene for hydroxysteroid (17-beta) dehydrogenase 3, 2 novel genes and two CpG islands, complete sequence Length = 169646 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 19341 tatatataatatacacatat 19360
>emb|AL161622.12| Human DNA sequence from clone RP3-402H5 on chromosome 6p12.3-21.1 Contains the 3' end of a gene for a novel protein similar to seven transmembrane receptor (Rhodopsin family), complete sequence Length = 131967 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 130438 tatatataatatacacatat 130419
>emb|AL138885.21| Human DNA sequence from clone RP1-290I10 on chromosome 6 Contains a ribosomal protein L7 (RPL7) pseudogene, the TFAP2A gene for transcription factor AP-2 alpha (activating enhancer-binding protein 2 alpha), four novel genes, a mitochondrial ribosomal protein L47 (MRPL47) pseudogene and 11 CpG islands, complete sequence Length = 180133 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 62391 tatatataatatacacatat 62372 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 62372 tatatataatatacacatat 62353
>emb|AL136460.28| Human DNA sequence from clone RP11-102J14 on chromosome 20 Contains a novel gene and the PA2G4P2 gene for proliferation-associated 2G4 pseudogene 2, complete sequence Length = 139030 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 ttatatataatatacacata 80 |||||||||||||||||||| Sbjct: 107843 ttatatataatatacacata 107824
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 tcaggaagtactttgacatg 359 |||||||||||||||||||| Sbjct: 1870922 tcaggaagtactttgacatg 1870941
>emb|CR382401.1| Plasmodium falciparum chromosome 6, complete sequence; segment 4/5 Length = 337203 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 ttgttatatataatatacacatat 81 ||||||||||||||||||| |||| Sbjct: 8830 ttgttatatataatatacatatat 8807
>emb|AL929352.1|PFA929352 Plasmodium falciparum strain 3D7, chromosome 5, segment 2/4 Length = 313050 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 ttgttatatataatatacacatat 81 ||||||||||||||||| |||||| Sbjct: 196828 ttgttatatataatataaacatat 196851
>emb|AL603662.11| Mouse DNA sequence from clone RP23-396M19 on chromosome 11 Contains the 3' end of the Myh10 gene for non-muscle myosin heavy chain 10, the Ndel1 gene for nuclear distribution gene E-like homolog 1 (A. nidulans), three genes for novel proteins (9930039A11Rik, 1810012H11Rik and D130071N09), the Rpl26 gene for ribosomal protein L26, gene Oppo1-pending (oppo 1), gene RAN guanine nucleotide release factor (Rangnrf-pending) and three CpG islands, complete sequence Length = 201275 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 tagcatttgttatatataat 71 |||||||||||||||||||| Sbjct: 85524 tagcatttgttatatataat 85505
>emb|BX950874.9| Zebrafish DNA sequence from clone CH211-128I1, complete sequence Length = 177114 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ttatatataatatacacata 80 |||||||||||||||||||| Sbjct: 95957 ttatatataatatacacata 95976
>gb|AC048351.18| Homo sapiens 3 BAC RP11-175P19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161687 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 62658 tatatataatatacacatat 62677
>emb|BX324132.10| Zebrafish DNA sequence from clone DKEY-176G4 in linkage group 8, complete sequence Length = 266430 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 tttgttatatataatatacacata 80 ||||||||||||||||||| |||| Sbjct: 169109 tttgttatatataatatacccata 169132
>emb|AL929499.5| Mouse DNA sequence from clone RP23-116K8 on chromosome 4 Contains a capping protein alpha 1 (Cappa1) pseudogene, complete sequence Length = 159369 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 123689 tatatataatatacacatat 123708
>gb|AC101688.13| Mus musculus chromosome 5, clone RP23-212P12, complete sequence Length = 200300 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 92580 tatatataatatacacatat 92599
>gb|AC087558.13| Mus musculus strain C57BL/6J chromosome 2 clone rp23-282p18, complete sequence Length = 217766 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 11938 tatatataatatacacatat 11919
>gb|AC122147.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0072F04, complete sequence Length = 137724 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 tcaggaagtactttgacatg 359 |||||||||||||||||||| Sbjct: 89375 tcaggaagtactttgacatg 89394
>gb|AC092553.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0072F04, complete sequence Length = 133121 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 tcaggaagtactttgacatg 359 |||||||||||||||||||| Sbjct: 122496 tcaggaagtactttgacatg 122515
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 gagaaaaacgaagaaaacaa 236 |||||||||||||||||||| Sbjct: 1921605 gagaaaaacgaagaaaacaa 1921586
>dbj|AK157185.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830206D18 product:unclassifiable, full insert sequence Length = 3135 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 2171 tatatataatatacacatat 2190
>gb|AC073468.9| Homo sapiens BAC clone RP11-405I21 from 7, complete sequence Length = 138435 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 62680 tatatataatatacacatat 62661
>gb|AC025561.6| Homo sapiens BAC clone RP11-673E21 from 4, complete sequence Length = 154280 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 119662 tatatataatatacacatat 119681
>gb|AC079616.4| Homo sapiens BAC clone RP11-605L5 from 4, complete sequence Length = 165913 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 atatataatatacacatatc 82 |||||||||||||||||||| Sbjct: 54771 atatataatatacacatatc 54790
>gb|AC021146.7| Homo sapiens BAC clone RP11-468N14 from 4, complete sequence Length = 217991 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 71734 tatatataatatacacatat 71715 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 71709 tatatataatatacacatat 71690
>gb|AC161887.5| Mus musculus 6 BAC RP23-75P5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 227751 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 37326 tatatataatatacacatat 37345
>emb|CR390649.1| Gallus gallus finished cDNA, clone ChEST594a22 Length = 1769 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 catttgttatatataatata 74 |||||||||||||||||||| Sbjct: 417 catttgttatatataatata 436
>dbj|AK051665.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130063D22 product:non-catalytic region of tyrosine kinase adaptor protein 2, full insert sequence Length = 2772 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 2539 tatatataatatacacatat 2520
>dbj|AK014949.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4921523A11 product:non-catalytic region of tyrosine kinase adaptor protein 2, full insert sequence Length = 2767 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 2532 tatatataatatacacatat 2513
>gb|AC022274.5|AC022274 Homo sapiens BAC clone RP11-697M17 from 8, complete sequence Length = 190701 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 70593 tatatataatatacacatat 70574
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 tcaggaagtactttgacatg 359 |||||||||||||||||||| Sbjct: 1870922 tcaggaagtactttgacatg 1870941
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 4.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 329 gtcggggacagtcaggaagtactttgacatggccttcctg 368 ||||||||| | ||||||||| | ||||||||||||||| Sbjct: 14055903 gtcggggacggcgaggaagtacctcgacatggccttcctg 14055942
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 aaaccagagaaaaacgaaga 230 |||||||||||||||||||| Sbjct: 8419905 aaaccagagaaaaacgaaga 8419886
>gb|AC021101.8| Homo sapiens BAC clone RP11-114P18 from 4, complete sequence Length = 47069 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 19381 tatatataatatacacatat 19362
>gb|AC022655.8| Homo sapiens, clone RP11-28O3, complete sequence Length = 142630 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 69142 tatatataatatacacatat 69161
>gb|AC105393.3| Homo sapiens BAC clone RP11-379N10 from 2, complete sequence Length = 121822 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ccccctctccagcgacccca 145 |||||||||||||||||||| Sbjct: 102264 ccccctctccagcgacccca 102283
>gb|AC122472.5| Mus musculus BAC clone RP24-323G20 from chromosome 10, complete sequence Length = 180612 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 155806 tatatataatatacacatat 155787
>gb|AC007915.3|AC007915 Genomic sequence for Arabidopsis thaliana BAC F27F5 from chromosome I, complete sequence Length = 137336 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 gaaaaacgaagaaaacaatg 238 |||||||||||||||||||| Sbjct: 81165 gaaaaacgaagaaaacaatg 81146
>ref|XM_237115.3| PREDICTED: Rattus norvegicus non-catalytic region of tyrosine kinase adaptor protein 2 (predicted) (Nck2_predicted), mRNA Length = 2743 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 2510 tatatataatatacacatat 2491
>gb|AC011469.6|AC011469 Homo sapiens chromosome 19 clone CTC-475D23, complete sequence Length = 110569 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 7987 tatatataatatacacatat 8006
>gb|AC113425.2| Homo sapiens chromosome 5 clone RP11-626B22, complete sequence Length = 180571 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 aaaataacatacaaaaggcg 184 |||||||||||||||||||| Sbjct: 119286 aaaataacatacaaaaggcg 119267
>gb|AC062015.7| Homo sapiens BAC clone CTD-2031E17 from 2, complete sequence Length = 144223 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 35979 tatatataatatacacatat 35960
>dbj|AP005183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0021G06 Length = 137678 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 aaaccagagaaaaacgaaga 230 |||||||||||||||||||| Sbjct: 125003 aaaccagagaaaaacgaaga 124984
>dbj|AP005732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0014M19 Length = 129270 Score = 40.1 bits (20), Expect = 4.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 329 gtcggggacagtcaggaagtactttgacatggccttcctg 368 ||||||||| | ||||||||| | ||||||||||||||| Sbjct: 34838 gtcggggacggcgaggaagtacctcgacatggccttcctg 34877
>emb|BX005446.8| Mouse DNA sequence from clone RP23-20G23 on chromosome X, complete sequence Length = 159892 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 74448 tatatataatatacacatat 74467
>gb|AC158685.4| Mus musculus 6 BAC RP23-284D11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 191856 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 105590 tatatataatatacacatat 105609
>dbj|BS000217.1| Pan troglodytes chromosome 22 clone:PTB-004I03, map 22, complete sequences Length = 53637 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 12360 tatatataatatacacatat 12379
>dbj|BS000079.1| Pan troglodytes chromosome 22 clone:RP43-047O12, map 22, complete sequences Length = 158933 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 43696 tatatataatatacacatat 43677
>emb|AL845427.11| Mouse DNA sequence from clone RP23-436J19 on chromosome 2, complete sequence Length = 168207 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 11943 tatatataatatacacatat 11924
>dbj|AK120449.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013101D04, full insert sequence Length = 3762 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 tcaggaagtactttgacatg 359 |||||||||||||||||||| Sbjct: 1901 tcaggaagtactttgacatg 1882
>dbj|AP005178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0056I06 Length = 138653 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 aaaccagagaaaaacgaaga 230 |||||||||||||||||||| Sbjct: 51498 aaaccagagaaaaacgaaga 51479
>gb|AC102338.10| Mus musculus chromosome 3, clone RP24-559D1, complete sequence Length = 176047 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 ttgttatatataatatacacatat 81 ||||||||||| |||||||||||| Sbjct: 94941 ttgttatatattatatacacatat 94964
>gb|BC011071.1| Mus musculus non-catalytic region of tyrosine kinase adaptor protein 2, mRNA (cDNA clone MGC:18364 IMAGE:3673483), complete cds Length = 2382 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 2101 tatatataatatacacatat 2082
>gb|AC155260.2| Mus musculus BAC clone RP24-71G3 from 12, complete sequence Length = 190003 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 129302 tatatataatatacacatat 129283
>dbj|AK063300.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-F02, full insert sequence Length = 1437 Score = 40.1 bits (20), Expect = 4.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 329 gtcggggacagtcaggaagtactttgacatggccttcctg 368 ||||||||| | ||||||||| | ||||||||||||||| Sbjct: 930 gtcggggacggcgaggaagtacctcgacatggccttcctg 891
>gb|AC023593.14| Homo sapiens 3 BAC RP11-427I6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 189757 Score = 40.1 bits (20), Expect = 4.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 15 attttaattcctctgcatttcatttcat 42 |||||||||||| |||||||| |||||| Sbjct: 98483 attttaattcctatgcatttcttttcat 98456
>emb|AL137164.3|CNS01DWF Human chromosome 14 DNA sequence BAC R-893D14 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 175368 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 61558 tatatataatatacacatat 61539
>dbj|AP001684.1| Homo sapiens genomic DNA, chromosome 21q, section 28/105 Length = 340000 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 224489 tatatataatatacacatat 224470
>emb|AL929117.7| Mouse DNA sequence from clone RP23-442K5 on chromosome 2, complete sequence Length = 161940 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 77789 tatatataatatacacatat 77770
>gb|AC160539.11| Mus musculus chromosome 15, clone RP24-163H9, complete sequence Length = 151529 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 tgttatatataatatacaca 78 |||||||||||||||||||| Sbjct: 82180 tgttatatataatatacaca 82199
>gb|AF053528.1|HSFRAN1 Homo sapiens allele 17 fragile site locus (FRA10B) minisatellite, 5' sequence Length = 526 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 502 tatatataatatacacatat 483
>gb|AF053520.1|HSFRAK1 Homo sapiens allele 12 fragile site locus (FRA10B) minisatellite, 5' sequence Length = 910 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 508 tatatataatatacacatat 527
>gb|AF053512.1|HSFRAF2 Homo sapiens allele 7 fragile site locus (FRA10B) minisatellite sequence Length = 421 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 2 tatatataatatacacatat 21
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 tcaggaagtactttgacatg 359 |||||||||||||||||||| Sbjct: 1870873 tcaggaagtactttgacatg 1870892
>emb|AL627128.16| Mouse DNA sequence from clone RP23-133J9 on chromosome 4, complete sequence Length = 183089 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 31630 tatatataatatacacatat 31649
>emb|AL772159.12| Mouse DNA sequence from clone RP23-107H15 on chromosome 2, complete sequence Length = 188816 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 53234 tatatataatatacacatat 53253
>emb|AL833771.4| Mouse DNA sequence from clone RP23-228H14 on chromosome 2, complete sequence Length = 189283 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ttatatataatatacacata 80 |||||||||||||||||||| Sbjct: 150229 ttatatataatatacacata 150248
>dbj|AP000953.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B697O17, LL56-APP region, complete sequence Length = 96067 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 tatatataatatacacatat 81 |||||||||||||||||||| Sbjct: 46354 tatatataatatacacatat 46335
>dbj|AP001157.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-658F2, complete sequence Length = 200458 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 cctaacaaaaccagagaaaa 223 |||||||||||||||||||| Sbjct: 61118 cctaacaaaaccagagaaaa 61099 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,866,308 Number of Sequences: 3902068 Number of extensions: 3866308 Number of successful extensions: 103743 Number of sequences better than 10.0: 170 Number of HSP's better than 10.0 without gapping: 170 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102969 Number of HSP's gapped (non-prelim): 774 length of query: 368 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 346 effective length of database: 17,147,199,772 effective search space: 5932931121112 effective search space used: 5932931121112 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
