Clone Name | rbastl56f01 |
---|---|
Clone Library Name | barley_pub |
>PEPM_MYTED (P56839) Phosphoenolpyruvate phosphomutase (EC 5.4.2.9)| (Phosphoenolpyruvate mutase) (PEP mutase) (PEP phosphomutase) Length = 294 Score = 28.9 bits (63), Expect = 3.8 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = -1 Query: 154 GRWGRSGTEEAETNVNDSSEAVVTEVVEPSEVRTENENDP 35 G WG + A+ V DS+EA T+VVE E ++ + P Sbjct: 41 GIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDVP 80
>ISPG_NEIMB (Q9JZ40) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC| 1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) Length = 421 Score = 27.7 bits (60), Expect = 8.5 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Frame = +2 Query: 92 GFRRVVDIGLSLLGAGSTP-SPAKGDGHHLVDL 187 G ++ DIG+SL G G TP +P DG V L Sbjct: 350 GESKLADIGISLPGTGETPVAPVYVDGERKVTL 382
>ISPG_NEIMA (Q9JU34) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC| 1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) Length = 421 Score = 27.7 bits (60), Expect = 8.5 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Frame = +2 Query: 92 GFRRVVDIGLSLLGAGSTP-SPAKGDGHHLVDL 187 G ++ DIG+SL G G TP +P DG V L Sbjct: 350 GESKLADIGISLPGTGETPVAPVYVDGERKVTL 382
>ISPG_NEIG1 (Q5F913) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC| 1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) Length = 421 Score = 27.7 bits (60), Expect = 8.5 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Frame = +2 Query: 92 GFRRVVDIGLSLLGAGSTP-SPAKGDGHHLVDL 187 G ++ DIG+SL G G TP +P DG V L Sbjct: 350 GESKLADIGISLPGTGETPVAPVYVDGERKVTL 382
>TPIS_STELP (P48497) Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM)| (Triose-phosphate isomerase) Length = 257 Score = 27.7 bits (60), Expect = 8.5 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 7/47 (14%) Frame = -1 Query: 160 LGGRWGRSGTEEAETNVND-------SSEAVVTEVVEPSEVRTENEN 41 +GG W +GT+E+ + + D ++ VVT VV P V +EN Sbjct: 7 VGGNWKCNGTQESVSKIVDTLNEPTIAANDVVTVVVSPPYVFLPDEN 53 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,974,819 Number of Sequences: 219361 Number of extensions: 517829 Number of successful extensions: 1611 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1570 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1611 length of database: 80,573,946 effective HSP length: 46 effective length of database: 70,483,340 effective search space used: 1691600160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)