ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl56e12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC... 82 3e-16
2LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC... 68 7e-12
3LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC... 41 0.001
4LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12) 40 0.002
5LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12) 38 0.008
6LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13... 36 0.022
7LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12) 36 0.029
8LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase... 35 0.038
9LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12) 35 0.050
10LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1... 35 0.050
11LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12) 35 0.050
12LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precur... 35 0.050
13LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94) 33 0.25
14LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12) 32 0.32
15LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12) 32 0.42
16LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12) 31 0.72
17LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12) 31 0.94
18LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygena... 30 1.6
19UREE_RHOS4 (Q3J156) Urease accessory protein ureE 30 1.6
20LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12) 30 2.1
21LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1) 29 2.7
22Y463_CHRVO (Q7P0V2) UPF0341 protein CV_0463 28 4.7
23LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12) 28 4.7
24LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3) 28 4.7
25LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12) 28 8.0
26LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12) 28 8.0
27ACDE2_METTE (Q9C4Z3) Acetyl-CoA decarbonylase/synthase complex e... 28 8.0

>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)|
            (LOX-100) (LOX2:Hv:1)
          Length = 936

 Score = 82.4 bits (202), Expect = 3e-16
 Identities = 41/46 (89%), Positives = 41/46 (89%), Gaps = 5/46 (10%)
 Frame = -2

Query: 268  PDRKNRHGAGMVPYVLLRPS-----DGDPTDEKMVMEMGIPNSISI 146
            PDRKNRHGAGMVPYVLLRPS     DGDPTDEKMVMEMGIPNSISI
Sbjct: 891  PDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMGIPNSISI 936



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>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)|
            (LOX2:Hv:2)
          Length = 932

 Score = 67.8 bits (164), Expect = 7e-12
 Identities = 31/39 (79%), Positives = 35/39 (89%)
 Frame = -2

Query: 262  RKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 146
            R+NRHGAG+VPYVLLRP +G+P D K VMEMGIPNSISI
Sbjct: 894  RRNRHGAGVVPYVLLRPLNGNPMDAKTVMEMGIPNSISI 932



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>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)|
           (LOX2:Hv:3)
          Length = 896

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 23/41 (56%), Positives = 26/41 (63%)
 Frame = -2

Query: 268 PDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 146
           P+ KNR GAG+VPY LL+     P  E  V   GIPNSISI
Sbjct: 861 PENKNRCGAGIVPYELLK-----PFSEPGVTGRGIPNSISI 896



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>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)|
          Length = 877

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 22/40 (55%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
 Frame = -2

Query: 259 KNRHGAGMVPYVLLRPSDGDPTDEK--MVMEMGIPNSISI 146
           KNR+G   +PY+LL P+  D T EK   +  MGIPNSISI
Sbjct: 838 KNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSISI 877



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>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)|
          Length = 899

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 18/41 (43%), Positives = 26/41 (63%)
 Frame = -2

Query: 268 PDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 146
           P R+NR GAG++PY L+ PS G       +   G+PNS++I
Sbjct: 864 PSRRNRCGAGVLPYELMAPSSGPG-----ITCRGVPNSVTI 899



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>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)|
          Length = 896

 Score = 36.2 bits (82), Expect = 0.022
 Identities = 21/38 (55%), Positives = 24/38 (63%)
 Frame = -2

Query: 259 KNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 146
           KNR GAG+V Y LL+     PT E  V  MG+P SISI
Sbjct: 864 KNRAGAGVVKYELLK-----PTSEHGVTGMGVPYSISI 896



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>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)|
          Length = 918

 Score = 35.8 bits (81), Expect = 0.029
 Identities = 21/39 (53%), Positives = 24/39 (61%)
 Frame = -2

Query: 262 RKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 146
           RKNR GAG++PY LL PS         V   G+PNSISI
Sbjct: 885 RKNRCGAGVLPYELLAPS-----SPPGVTCRGVPNSISI 918



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>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)|
          Length = 870

 Score = 35.4 bits (80), Expect = 0.038
 Identities = 21/42 (50%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -2

Query: 268 PDRKNRHGAGMVPYVLLRPSDGD-PTDEKMVMEMGIPNSISI 146
           P RKNR G    PY LL P+  D   D   +   GIPNSISI
Sbjct: 829 PHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIPNSISI 870



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>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 35.0 bits (79), Expect = 0.050
 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -2

Query: 268 PDRKNRHGAGMVPYVLLRPSDGDPTDEKM-VMEMGIPNSISI 146
           P+ KNR+G    PY+LL P+  D       +   GIPNSISI
Sbjct: 821 PELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 862



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>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)|
          Length = 924

 Score = 35.0 bits (79), Expect = 0.050
 Identities = 19/38 (50%), Positives = 24/38 (63%)
 Frame = -2

Query: 259 KNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 146
           KNR GAG++PY L++     P  +  V  MGIPNS SI
Sbjct: 892 KNRCGAGILPYQLMK-----PFSDSGVTGMGIPNSTSI 924



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>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)|
          Length = 866

 Score = 35.0 bits (79), Expect = 0.050
 Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -2

Query: 259 KNRHGAGMVPYVLLRPSDGDPTDEKM-VMEMGIPNSISI 146
           KNR+G    PY+LL P+  D T     +   GIPNSISI
Sbjct: 828 KNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIPNSISI 866



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>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC|
            1.13.11.12)
          Length = 941

 Score = 35.0 bits (79), Expect = 0.050
 Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = -2

Query: 259  KNRHGAGMVPYVLLRP-SDGDPTDEKMVMEMGIPNSISI 146
            KNR GAG++PY L++P SD   T       MGIPNS SI
Sbjct: 909  KNRCGAGILPYQLMKPFSDAGVTG------MGIPNSTSI 941



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>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)|
          Length = 853

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 18/38 (47%), Positives = 23/38 (60%)
 Frame = -2

Query: 259 KNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 146
           +NR+G   +PY LL PS      E+ +   GIPNSISI
Sbjct: 821 RNRYGPAKMPYTLLYPS-----SEEGLTFRGIPNSISI 853



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>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)|
          Length = 859

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 19/38 (50%), Positives = 22/38 (57%)
 Frame = -2

Query: 259 KNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 146
           KNR G   VPY LL P     T E+ +   GIPNS+SI
Sbjct: 827 KNRSGPVNVPYTLLFP-----TSEEGLTGKGIPNSVSI 859



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>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)|
          Length = 861

 Score = 32.0 bits (71), Expect = 0.42
 Identities = 18/38 (47%), Positives = 23/38 (60%)
 Frame = -2

Query: 259 KNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 146
           +NRHG   +PY LL PS      ++ +   GIPNSISI
Sbjct: 829 RNRHGPVEMPYTLLYPS-----SKEGLTFRGIPNSISI 861



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>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)|
          Length = 866

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 18/38 (47%), Positives = 23/38 (60%)
 Frame = -2

Query: 259 KNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 146
           +NR+G   +PY LL PS      E+ +   GIPNSISI
Sbjct: 834 RNRYGPVKMPYTLLYPS-----SEEGLTCRGIPNSISI 866



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>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 859

 Score = 30.8 bits (68), Expect = 0.94
 Identities = 19/38 (50%), Positives = 21/38 (55%)
 Frame = -2

Query: 259 KNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 146
           KNR G   +PY LL PS      E  V   GIPNS+SI
Sbjct: 827 KNRTGLVKMPYTLLFPSS-----EGGVTGRGIPNSVSI 859



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>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)|
          Length = 863

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -2

Query: 268 PDRKNRHGAGMVPYVLLRPSDGDPTD-EKMVMEMGIPNSISI 146
           P  KNR G    PY L+ P+  D     + +   GIPNSISI
Sbjct: 822 PLLKNRVGPANFPYTLMFPNTSDNKGAAEGITARGIPNSISI 863



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>UREE_RHOS4 (Q3J156) Urease accessory protein ureE|
          Length = 182

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -1

Query: 269 PRPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHPQQHLHLS 141
           PR E P R   GA    + +G   HG   G G  HP  H+H+S
Sbjct: 128 PRTE-PFRPEGGAYGHGRTLGH-DHGPAQGHGHDHPHVHVHIS 168



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>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)|
          Length = 864

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = -2

Query: 268 PDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 146
           P  +NR G   +PY LL  S      E+ +   GIPNSISI
Sbjct: 829 PSLRNRTGPVQLPYTLLHRS-----SEEGLTFKGIPNSISI 864



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>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)|
          Length = 839

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 18/37 (48%), Positives = 21/37 (56%)
 Frame = -2

Query: 256 NRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 146
           NR G   +PY LL PS      E+ +   GIPNSISI
Sbjct: 808 NRLGPVQLPYTLLYPSS-----EEGLTFRGIPNSISI 839



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>Y463_CHRVO (Q7P0V2) UPF0341 protein CV_0463|
          Length = 258

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = -1

Query: 266 RPEKPTRRRHGAVCAAQAVGR*SHGREDGDGDGHP 162
           R E  T  +HGAV A    G   H RE G G G P
Sbjct: 45  RLELLTTGKHGAVYAEFVEGAARHRREQGGGRGQP 79



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>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -2

Query: 259 KNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 146
           +NR+G   +PY +L P+     +++ +   GIPNSISI
Sbjct: 829 RNRNGPVKMPYTVLLPT----CEDEGLTFRGIPNSISI 862



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>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)|
          Length = 857

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = -2

Query: 259 KNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 146
           +NR G   +PY LL PS      ++ +   GIPNSISI
Sbjct: 825 RNRCGPVQMPYTLLLPS-----SKEGLTFRGIPNSISI 857



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>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)|
          Length = 864

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = -2

Query: 268 PDRKNRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 146
           P   +R G   +PY LL PS  +    +     GIPNSISI
Sbjct: 829 PSLYHRVGPVQLPYTLLHPSSKEGLTFR-----GIPNSISI 864



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>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 861

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 17/37 (45%), Positives = 19/37 (51%)
 Frame = -2

Query: 256 NRHGAGMVPYVLLRPSDGDPTDEKMVMEMGIPNSISI 146
           NR G    PY LL P     T E  +   GIPNS+SI
Sbjct: 830 NRSGPVNAPYTLLFP-----TSEGGLTGKGIPNSVSI 861



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>ACDE2_METTE (Q9C4Z3) Acetyl-CoA decarbonylase/synthase complex epsilon subunit|
           2 (ACDS complex epsilon subunit 2)
          Length = 170

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -2

Query: 82  WPGGGYNGNEPQIIIKGHDDIYI 14
           WPG   NGN   II+ GH   YI
Sbjct: 99  WPGLDGNGNYDTIILLGHKKYYI 121


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,843,026
Number of Sequences: 219361
Number of extensions: 899587
Number of successful extensions: 2189
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2166
length of database: 80,573,946
effective HSP length: 65
effective length of database: 66,315,481
effective search space used: 1591571544
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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