ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl56e11 |
|---|---|
| Clone Library Name | barley_pub |
>YR5A_AGRT5 (Q8U530) Hypothetical protein Atu2659.1/AGR_C_4820| Length = 106 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/64 (25%), Positives = 29/64 (45%) Frame = -2 Query: 201 SVYDWAVIGGLPIRWFHFFSFCRCRIQ*IHFCPYDLLNIAEACLCMV*QRLVK*TLPASG 22 ++Y W +I W + F+ R Q ++ L+N+ E L R ++ LP G Sbjct: 23 NLYTWVLIASAIFSWLYAFNVINSRNQFVNAIGSFLVNVTEPAL-----RPIRRILPNLG 77 Query: 21 NLDL 10 +D+ Sbjct: 78 GIDI 81
>Y414_MYCGE (P47653) Hypothetical protein MG414| Length = 1036 Score = 28.5 bits (62), Expect = 4.4 Identities = 15/42 (35%), Positives = 25/42 (59%) Frame = +3 Query: 30 QAKFISPASVKPYRDMLQRCSTNRRDKNGFTESCNDRRKKNE 155 +++ IS SV+P D +++ ST +R K+GF R+ NE Sbjct: 616 ESENISNYSVEPLFDSIKKLSTIKRTKDGFEYKFKYRKDFNE 657
>BZZ1_YEAST (P38822) Protein BZZ1| Length = 633 Score = 28.1 bits (61), Expect = 5.8 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +3 Query: 60 KPYRDMLQRCSTNRRDKNGFTESCNDRRKK 149 K +D + CST +N +T++ NDR KK Sbjct: 152 KAKKDYDEACSTMEMARNRYTKASNDRNKK 181
>MURA1_CLOTE (Q899K4) UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 (EC| 2.5.1.7) (Enoylpyruvate transferase 1) (UDP-N-acetylglucosamine enolpyruvyl transferase 1) (EPT 1) Length = 421 Score = 28.1 bits (61), Expect = 5.8 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +1 Query: 73 TCFSDVQQIVGTKMDSLNPATTEGKKMKPSYW 168 +C SD I TK++S N T + +KM+ SY+ Sbjct: 69 SCSSDAIIIDSTKLNSYNANTEDVRKMRASYY 100
>DRD2_PANTR (P60026) D(2) dopamine receptor (Dopamine D2 receptor)| Length = 443 Score = 27.7 bits (60), Expect = 7.6 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Frame = +3 Query: 186 PNH--IHSTPDLPSYKRTWGRAPPKGLI*QIPSDQTEPKLRTKTA 314 P+H +HSTPD P+ G A I +I QT P +T+T+ Sbjct: 310 PSHHGLHSTPDSPAKPEKNGHAKDHPKIAKIFEIQTMPNGKTRTS 354
>DRD2_HUMAN (P14416) D(2) dopamine receptor (Dopamine D2 receptor)| Length = 443 Score = 27.7 bits (60), Expect = 7.6 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Frame = +3 Query: 186 PNH--IHSTPDLPSYKRTWGRAPPKGLI*QIPSDQTEPKLRTKTA 314 P+H +HSTPD P+ G A I +I QT P +T+T+ Sbjct: 310 PSHHGLHSTPDSPAKPEKNGHAKDHPKIAKIFEIQTMPNGKTRTS 354
>PIGU_RAT (Q8CHJ1) GPI transamidase component PIG-U| (Phosphatidylinositol-glycan biosynthesis, class U protein) (Cell division cycle protein 91-like 1) (CDC91-like 1 protein) (Liver regeneration-related protein LRRGT00059) Length = 434 Score = 27.7 bits (60), Expect = 7.6 Identities = 16/39 (41%), Positives = 24/39 (61%) Frame = -1 Query: 172 ITNTMVSFFFLLSLQDSVNPFLSLRFVEHR*SMSLYGLT 56 I NT+++FF L +++ SV FLS F+ SLY +T Sbjct: 161 INNTLIAFFILTTIKGSV--FLSAIFLALATYQSLYPIT 197
>CBPE_BOVIN (P04836) Carboxypeptidase E (EC 3.4.17.10) (CPE) (Carboxypeptidase| H) (CPH) (Enkephalin convertase) (Prohormone-processing carboxypeptidase) Length = 434 Score = 27.7 bits (60), Expect = 7.6 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +3 Query: 129 CNDRRKKNETIVLVIHQ*PPNHIHSTPDL 215 CN+ +K NETIV +IH IH P L Sbjct: 90 CNEYQKGNETIVQLIHN---TRIHIMPSL 115
>PTG3C_MYCGE (P47315) PTS system glucose-specific EIICBA component (EIICBA-Glc)| (EII-Glc/EIII-Glc) [Includes: Glucose permease IIC component (PTS system glucose-specific EIIC component); Glucose-specific phosphotransferase enzyme IIB component (EC 2.7.1.6 Length = 908 Score = 27.7 bits (60), Expect = 7.6 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 9/73 (12%) Frame = -3 Query: 278 GWNLLNEPFGWGASPSSFIARKVRCR---VYMIGRLLVD----YQYDGF--IFFPSVVAG 126 G+N+L W A P S IA + + G ++V Y Y+ F I P V+ Sbjct: 128 GYNILY----WKAVPQSAIASTLGLNSLSTSVFGGIIVGALTAYLYNKFYAIRLPDVIGF 183 Query: 125 FSESIFVPTIC*T 87 FS + FVP IC T Sbjct: 184 FSGTRFVPIICMT 196
>DRD2_CERAE (P52702) D(2) dopamine receptor (Dopamine D2 receptor)| Length = 443 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Frame = +3 Query: 186 PNH--IHSTPDLPSYKRTWGRAPPKGLI*QIPSDQTEPKLRTKTA 314 P+H +HSTPD P+ G A I +I QT P +T+T+ Sbjct: 310 PSHHGLHSTPDSPAKPEKNGHAKNHPKIAKIFEIQTMPNGKTRTS 354
>SYC_SILPO (Q5LRJ6) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 465 Score = 27.3 bits (59), Expect = 9.9 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +3 Query: 201 STPDLPSYKRTWGRAPP 251 STPDLP + WGR P Sbjct: 191 STPDLPGWDSPWGRGRP 207
>CBPE_MOUSE (Q00493) Carboxypeptidase E precursor (EC 3.4.17.10) (CPE)| (Carboxypeptidase H) (CPH) (Enkephalin convertase) (Prohormone-processing carboxypeptidase) Length = 476 Score = 27.3 bits (59), Expect = 9.9 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +3 Query: 129 CNDRRKKNETIVLVIHQ*PPNHIHSTPDL 215 CN+ +K NETIV +IH IH P L Sbjct: 132 CNEYQKGNETIVNLIHS---TRIHIMPSL 157
>CBPE_HUMAN (P16870) Carboxypeptidase E precursor (EC 3.4.17.10) (CPE)| (Carboxypeptidase H) (CPH) (Enkephalin convertase) (Prohormone-processing carboxypeptidase) Length = 476 Score = 27.3 bits (59), Expect = 9.9 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +3 Query: 129 CNDRRKKNETIVLVIHQ*PPNHIHSTPDL 215 CN+ +K NETIV +IH IH P L Sbjct: 132 CNEYQKGNETIVNLIHS---TRIHIMPSL 157
>PIGU_MOUSE (Q8K358) GPI transamidase component PIG-U| (Phosphatidylinositol-glycan biosynthesis, class U protein) (Cell division cycle protein 91-like 1) (CDC91-like 1 protein) Length = 433 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/39 (41%), Positives = 24/39 (61%) Frame = -1 Query: 172 ITNTMVSFFFLLSLQDSVNPFLSLRFVEHR*SMSLYGLT 56 I NT+++FF L +++ SV FLS F+ SLY +T Sbjct: 160 INNTLIAFFILTTIKGSV--FLSAVFLALATYQSLYPVT 196 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,918,871 Number of Sequences: 219361 Number of extensions: 1134644 Number of successful extensions: 2355 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2330 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2355 length of database: 80,573,946 effective HSP length: 81 effective length of database: 62,805,705 effective search space used: 1507336920 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
