ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl56e10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|BX927275.8| Zebrafish DNA sequence from clone DKEY-108P14 in linkage group 23, complete sequence Length = 133912 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 ttgtagtatgtaaagaaaaaa 109 ||||||||||||||||||||| Sbjct: 2487 ttgtagtatgtaaagaaaaaa 2467
>gb|AC084644.1|CBRG45L10 Caenorhabditis briggsae cosmid G45L10, complete sequence Length = 46749 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 aaagaaaaaatcaaacaagaa 120 ||||||||||||||||||||| Sbjct: 5231 aaagaaaaaatcaaacaagaa 5251
>gb|AC084585.1|CBRG41C07 Caenorhabditis briggsae cosmid G41C07, complete sequence Length = 35417 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Plus Query: 100 aaagaaaaaatcaaacaagaa 120 ||||||||||||||||||||| Sbjct: 1419 aaagaaaaaatcaaacaagaa 1439
>dbj|BS000060.1| Pan troglodytes chromosome 22 clone:RP43-086L15, map 22, complete sequences Length = 159919 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 tcctccaaaatcttgaaaaaa 70 ||||||||||||||||||||| Sbjct: 92233 tcctccaaaatcttgaaaaaa 92213
>dbj|AP001678.1| Homo sapiens genomic DNA, chromosome 21q, section 22/105 Length = 340000 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 tcctccaaaatcttgaaaaaa 70 ||||||||||||||||||||| Sbjct: 213633 tcctccaaaatcttgaaaaaa 213613
>dbj|AP007296.1| Lotus japonicus genomic DNA, clone:LjT02J24, TM0401, complete sequence Length = 71160 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 aaaaatcaaacaagaaagggt 125 ||||||||||||||||||||| Sbjct: 66579 aaaaatcaaacaagaaagggt 66559
>dbj|AP001254.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B66B12, LL56-APP region, complete sequence Length = 173915 Score = 42.1 bits (21), Expect = 0.54 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 tcctccaaaatcttgaaaaaa 70 ||||||||||||||||||||| Sbjct: 36226 tcctccaaaatcttgaaaaaa 36206
>gb|AC102303.10| Mus musculus chromosome 1, clone RP24-403I11, complete sequence Length = 162813 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 gaaagggtatcatcatccct 137 |||||||||||||||||||| Sbjct: 133468 gaaagggtatcatcatccct 133487
>gb|AC161060.6| Mus musculus BAC clone RP23-69N10 from chromosome 6, complete sequence Length = 222363 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 aaaaaatcaaacaagaaagg 123 |||||||||||||||||||| Sbjct: 16220 aaaaaatcaaacaagaaagg 16201
>gb|BT014314.1| Lycopersicon esculentum clone 133566F, mRNA sequence Length = 1390 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 tcaaacaagaaagggtatca 129 |||||||||||||||||||| Sbjct: 1039 tcaaacaagaaagggtatca 1020
>gb|AC146775.8| Medicago truncatula clone mth2-95g14, complete sequence Length = 139593 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 98 gtaaagaaaaaatcaaacaagaaa 121 ||||||||| |||||||||||||| Sbjct: 126721 gtaaagaaagaatcaaacaagaaa 126698
>emb|AL359701.27| Human DNA sequence from clone RP5-876C12 on chromosome 1 Contains the 3' end of the PDE4B gene for phosphodiesterase 4B, cAMP-specific (phosphodiesterase E4 dunce homolog, Drosophila), complete sequence Length = 78153 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 aaaaaatcaaacaagaaagg 123 |||||||||||||||||||| Sbjct: 14455 aaaaaatcaaacaagaaagg 14436
>emb|AL356672.9| Human DNA sequence from clone RP11-452D24 on chromosome 6, complete sequence Length = 166517 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 agaaaaaatcaaacaagaaagggt 125 |||||||||||||||| ||||||| Sbjct: 112666 agaaaaaatcaaacaataaagggt 112689
>emb|CR848038.1| Chlamydophila abortus strain S26/3, complete genome Length = 1144377 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 agaaaaaatcaaacaagaaa 121 |||||||||||||||||||| Sbjct: 500902 agaaaaaatcaaacaagaaa 500883
>emb|BX842642.1| Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete sequence; segment 1/4 Length = 347558 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 taaagaaaaaatcaaacaagaaag 122 |||||||||||| ||||||||||| Sbjct: 326083 taaagaaaaaattaaacaagaaag 326106
>emb|BX640500.10| Zebrafish DNA sequence from clone RP71-86I11 in linkage group 9, complete sequence Length = 120013 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 aaagaaaaaatcaaacaaga 119 |||||||||||||||||||| Sbjct: 46615 aaagaaaaaatcaaacaaga 46634
>gb|AC012675.5|AC012675 Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone BACR10E07, complete sequence Length = 176818 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 aaaaaatcaaacaagaaagg 123 |||||||||||||||||||| Sbjct: 78388 aaaaaatcaaacaagaaagg 78369
>gb|AC084559.1|CBRG35L02 Caenorhabditis briggsae cosmid G35L02, complete sequence Length = 42112 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 cctccaaaatcttgaaaaaa 70 |||||||||||||||||||| Sbjct: 40841 cctccaaaatcttgaaaaaa 40860
>gb|AC010657.3|AC010657 Genomic sequence for Arabidopsis thaliana BAC T5E21 from chromosome I, complete sequence Length = 83351 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 atacaaaactatcctccaaa 58 |||||||||||||||||||| Sbjct: 82865 atacaaaactatcctccaaa 82846
>gb|AC011815.7|AC011815 Homo sapiens chromosome , clone RP11-158H5, complete sequence Length = 156244 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 tcatccctggagatgtcatc 149 |||||||||||||||||||| Sbjct: 103919 tcatccctggagatgtcatc 103938
>gb|AF218257.1|AF218257 Arabidopsis thaliana 12-oxo-phytodienoate reductase gene, complete cds Length = 18202 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 atacaaaactatcctccaaa 58 |||||||||||||||||||| Sbjct: 11337 atacaaaactatcctccaaa 11318
>gb|AC006917.6|AC006917 Genomic sequence for Arabidopsis thaliana BAC F10B6 from chromosome I, complete sequence Length = 132699 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 atacaaaactatcctccaaa 58 |||||||||||||||||||| Sbjct: 13374 atacaaaactatcctccaaa 13355
>emb|BX322637.7| Zebrafish DNA sequence from clone DKEY-22A1 in linkage group 9, complete sequence Length = 178563 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 aaagaaaaaatcaaacaaga 119 |||||||||||||||||||| Sbjct: 126424 aaagaaaaaatcaaacaaga 126405
>gb|AE003616.2| Drosophila melanogaster chromosome 2L, section 25 of 83 of the complete sequence Length = 267997 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 aaaaaatcaaacaagaaagg 123 |||||||||||||||||||| Sbjct: 131613 aaaaaatcaaacaagaaagg 131594
>gb|AC125102.4| Mus musculus BAC clone RP24-208N22 from 6, complete sequence Length = 163235 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 aaaaaatcaaacaagaaagg 123 |||||||||||||||||||| Sbjct: 38229 aaaaaatcaaacaagaaagg 38248
>emb|AL672307.9| Mouse DNA sequence from clone RP23-141N2 on chromosome 2, complete sequence Length = 206168 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 tgtagtatgtaaagaaaaaa 109 |||||||||||||||||||| Sbjct: 53273 tgtagtatgtaaagaaaaaa 53292
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome Length = 1777831 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 aagaaaaaatcaaacaaga 119 ||||||||||||||||||| Sbjct: 742243 aagaaaaaatcaaacaaga 742261 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 aagaaaaaatcaaacaaga 119 ||||||||||||||||||| Sbjct: 721308 aagaaaaaatcaaacaaga 721326
>gb|AC116792.17| Mus musculus chromosome 6, clone RP24-304O23, complete sequence Length = 155145 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 142 atgtcatcgcatatcataa 160 ||||||||||||||||||| Sbjct: 149991 atgtcatcgcatatcataa 149973
>ref|XM_475978.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2343 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 aagaaaaaatcaaacaaga 119 ||||||||||||||||||| Sbjct: 1544 aagaaaaaatcaaacaaga 1562
>gb|AC098849.9| Mus musculus chromosome 3, clone RP23-12L23, complete sequence Length = 210441 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 89 ttgtagtatgtaaagaaaa 107 ||||||||||||||||||| Sbjct: 70380 ttgtagtatgtaaagaaaa 70362
>gb|AY521259.2| Bemisia tabaci mitochondrion, complete genome Length = 15322 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 95 tatgtaaagaaaaaatcaa 113 ||||||||||||||||||| Sbjct: 448 tatgtaaagaaaaaatcaa 430
>ref|NM_001032969.1| Monodelphis domestica DNA (cytosine-5-)-methyltransferase (DNMT1), mRNA Length = 4716 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 102 agaaaaaatcaaacaagaa 120 ||||||||||||||||||| Sbjct: 4660 agaaaaaatcaaacaagaa 4678
>gb|AC116728.12| Mus musculus chromosome 3, clone RP23-345H12, complete sequence Length = 192916 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 89 ttgtagtatgtaaagaaaa 107 ||||||||||||||||||| Sbjct: 15165 ttgtagtatgtaaagaaaa 15183
>gb|AC150524.3| Bos taurus BAC CH240-89P8 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 189720 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 taaagaaaaaatcaaacaa 117 ||||||||||||||||||| Sbjct: 165875 taaagaaaaaatcaaacaa 165893
>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05, complete sequence Length = 108479 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 aagaaaaaatcaaacaaga 119 ||||||||||||||||||| Sbjct: 5213 aagaaaaaatcaaacaaga 5231
>gb|AC146377.5| Pan troglodytes BAC clone RP43-79B6 from 7, complete sequence Length = 195459 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 taaagaaaaaatcaaacaa 117 ||||||||||||||||||| Sbjct: 131609 taaagaaaaaatcaaacaa 131591
>gb|AC122527.3| Mus musculus BAC clone RP24-502E10 from chromosome 6, complete sequence Length = 180682 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 142 atgtcatcgcatatcataa 160 ||||||||||||||||||| Sbjct: 128472 atgtcatcgcatatcataa 128490
>gb|AC162612.2| Mus musculus chromosome 19, clone RP24-334K20, complete sequence Length = 145561 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 tgtagtatgtaaagaaaaa 108 ||||||||||||||||||| Sbjct: 31166 tgtagtatgtaaagaaaaa 31184
>gb|BC006884.1| Mus musculus RIO kinase 1 (yeast), mRNA (cDNA clone IMAGE:3596221), complete cds Length = 1780 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 catcctgataaaaacacag 19 ||||||||||||||||||| Sbjct: 813 catcctgataaaaacacag 795
>gb|AC002067.2| Homo sapiens BAC clone CTB-126M9 from 7, complete sequence Length = 162912 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 taaagaaaaaatcaaacaa 117 ||||||||||||||||||| Sbjct: 105359 taaagaaaaaatcaaacaa 105341
>gb|AY829240.1| Sanguinicolid sp. W1284 cytochrome oxidase subunit I (CO1) gene, partial cds; mitochondrial Length = 732 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 atgtaaagaaaaaatcaaa 114 ||||||||||||||||||| Sbjct: 354 atgtaaagaaaaaatcaaa 336
>gb|AC109495.4| Homo sapiens chromosome 16 clone RP11-916L7, complete sequence Length = 120065 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 aaaaaatcaaacaagaaag 122 ||||||||||||||||||| Sbjct: 71884 aaaaaatcaaacaagaaag 71902
>emb|CR388100.7| Zebrafish DNA sequence from clone DKEY-126H23 in linkage group 19, complete sequence Length = 138214 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 6 tgataaaaacacagattaaatag 28 ||||| ||||||||||||||||| Sbjct: 133774 tgatacaaacacagattaaatag 133752
>gb|AC127226.3| Mus musculus BAC clone RP24-500I10 from chromosome 6, complete sequence Length = 166743 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 gataaaaacacagattaaa 25 ||||||||||||||||||| Sbjct: 53039 gataaaaacacagattaaa 53021
>gb|AC125171.4| Mus musculus BAC clone RP24-475M20 from chromosome 6, complete sequence Length = 167590 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 142 atgtcatcgcatatcataa 160 ||||||||||||||||||| Sbjct: 143163 atgtcatcgcatatcataa 143181
>gb|AC121082.13| Mus musculus chromosome 7, clone RP23-32F14, complete sequence Length = 231678 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 100 aaagaaaaaatcaaacaagaaag 122 |||||||||| |||||||||||| Sbjct: 148127 aaagaaaaaagcaaacaagaaag 148149
>gb|AC102790.7| Mus musculus chromosome 19, clone RP23-321D22, complete sequence Length = 242249 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 tgtagtatgtaaagaaaaa 108 ||||||||||||||||||| Sbjct: 218475 tgtagtatgtaaagaaaaa 218493
>gb|AC153529.7| Mus musculus 10 BAC RP23-239G23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 153084 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 50 tcctccaaaatcttgaaaa 68 ||||||||||||||||||| Sbjct: 138303 tcctccaaaatcttgaaaa 138321
>emb|BX465195.28| Zebrafish DNA sequence from clone DKEY-246J6 in linkage group 14, complete sequence Length = 175826 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 6 tgataaaaacacagattaaatag 28 ||||| ||||||||||||||||| Sbjct: 128729 tgatacaaacacagattaaatag 128751
>gb|AC135414.31| Medicago truncatula clone mth2-8n20, complete sequence Length = 127018 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 aaaaaatcaaacaagaaag 122 ||||||||||||||||||| Sbjct: 119079 aaaaaatcaaacaagaaag 119097
>gb|AC114934.2| Homo sapiens chromosome 5 clone CTD-2029K19, complete sequence Length = 114356 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 99 taaagaaaaaatcaaacaagaaa 121 |||||||||| |||||||||||| Sbjct: 105461 taaagaaaaagtcaaacaagaaa 105483
>gb|AC147009.5| Medicago truncatula clone mth2-139j3, complete sequence Length = 125303 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 104 aaaaaatcaaacaagaaag 122 ||||||||||||||||||| Sbjct: 7940 aaaaaatcaaacaagaaag 7922
>emb|CR788249.6| Zebrafish DNA sequence from clone DKEY-10F21 in linkage group 2, complete sequence Length = 202982 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 6 tgataaaaacacagattaaatag 28 ||||| ||||||||||||||||| Sbjct: 193868 tgatacaaacacagattaaatag 193846
>emb|AL662885.7| Human DNA sequence from clone RP13-208E17 on chromosome X Contains the ZCCHC5 gene for zinc finger CCHC domain containing 5, complete sequence Length = 154060 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 99 taaagaaaaaatcaaacaagaaa 121 |||||||||||||||| |||||| Sbjct: 9574 taaagaaaaaatcaaaaaagaaa 9596
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 taaagaaaaaatcaaacaa 117 ||||||||||||||||||| Sbjct: 937737 taaagaaaaaatcaaacaa 937755
>gb|AC102463.12| Mus musculus chromosome 1, clone RP24-328M5, complete sequence Length = 155111 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 ataaaaacacagattaaat 26 ||||||||||||||||||| Sbjct: 41778 ataaaaacacagattaaat 41760
>emb|CR936847.6| Mouse DNA sequence from clone DN-393H17 on chromosome 11, complete sequence Length = 170807 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 aaaaaatcaaacaagaaag 122 ||||||||||||||||||| Sbjct: 151138 aaaaaatcaaacaagaaag 151156
>emb|AL139076.2|CJ11168X3 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment 3/6 Length = 317511 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 aagaaaaaatcaaacaaga 119 ||||||||||||||||||| Sbjct: 40856 aagaaaaaatcaaacaaga 40874 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 aagaaaaaatcaaacaaga 119 ||||||||||||||||||| Sbjct: 19920 aagaaaaaatcaaacaaga 19938
>emb|AL662908.7| Mouse DNA sequence from clone RP23-478O10 on chromosome 11 Contains two NACHT, leucine rich repeat and PYD containing 1 (NALP1) pseudogenes, complete sequence Length = 96115 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 aaaaaatcaaacaagaaag 122 ||||||||||||||||||| Sbjct: 15985 aaaaaatcaaacaagaaag 16003
>emb|AL773519.5| Mouse DNA sequence from clone RP23-42C15 on chromosome 4 Contains mitochondrial NADH dehydrogenase 5 and 6 (mt-Nd5, mt-Nd6) pseudogenes and a mitochondrial cytochrome b (Cytb) pseudogene, complete sequence Length = 204189 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 111 caaacaagaaagggtatcatcat 133 ||||||| ||||||||||||||| Sbjct: 154994 caaacaacaaagggtatcatcat 154972
>emb|BX000470.24| Zebrafish DNA sequence from clone DKEY-16N16 in linkage group 1, complete sequence Length = 237809 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 6 tgataaaaacacagattaaatag 28 ||||| ||||||||||||||||| Sbjct: 199627 tgatagaaacacagattaaatag 199605
>emb|CR354380.7| Zebrafish DNA sequence from clone CH211-182L2 in linkage group 1, complete sequence Length = 165344 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 6 tgataaaaacacagattaaatag 28 ||||| ||||||||||||||||| Sbjct: 75368 tgatacaaacacagattaaatag 75390
>emb|BX511072.8| Zebrafish DNA sequence from clone CH211-63A11 in linkage group 12, complete sequence Length = 165932 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 6 tgataaaaacacagattaaatag 28 ||||| ||||||||||||||||| Sbjct: 29109 tgatacaaacacagattaaatag 29087
>gb|AF527541.1| Monodelphis domestica cytosine-5-methyltransferase (Dnmt1) mRNA, complete cds Length = 4716 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 102 agaaaaaatcaaacaagaa 120 ||||||||||||||||||| Sbjct: 4660 agaaaaaatcaaacaagaa 4678
>gb|AC147932.3| Saimiri boliviensis boliviensis clone CH254-331B16, complete sequence Length = 185755 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 88 gttgtagtatgtaaagaaaaaat 110 ||||||||||||||| ||||||| Sbjct: 3340 gttgtagtatgtaaaaaaaaaat 3318
>gb|AC093506.2| Homo sapiens chromosome 5 clone CTD-2021M10, complete sequence Length = 132899 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 99 taaagaaaaaatcaaacaagaaa 121 |||||||||| |||||||||||| Sbjct: 67633 taaagaaaaagtcaaacaagaaa 67611
>emb|BX005068.13| Zebrafish DNA sequence from clone DKEY-40H17 in linkage group 1, complete sequence Length = 215007 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 6 tgataaaaacacagattaaatag 28 ||||| ||||||||||||||||| Sbjct: 156262 tgatacaaacacagattaaatag 156240
>gb|AC105021.6| Homo sapiens chromosome 17, clone CTD-2033D24, complete sequence Length = 143552 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 taaagaaaaaatcaaacaa 117 ||||||||||||||||||| Sbjct: 91970 taaagaaaaaatcaaacaa 91952
>emb|BX649258.11| Zebrafish DNA sequence from clone CH211-203F4 in linkage group 15, complete sequence Length = 148199 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 6 tgataaaaacacagattaaatag 28 ||||| ||||||||||||||||| Sbjct: 49143 tgatacaaacacagattaaatag 49121
>gb|AC149579.11| Medicago truncatula clone mth2-99d8, complete sequence Length = 111010 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 aaaaaatcaaacaagaaag 122 ||||||||||||||||||| Sbjct: 10057 aaaaaatcaaacaagaaag 10075
>gb|AC092700.2| Homo sapiens chromosome 8, clone RP11-661A3, complete sequence Length = 201886 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 3 tcctgataaaaacacagattaaa 25 |||||||||||||||| |||||| Sbjct: 497 tcctgataaaaacacatattaaa 475
>gb|AC068522.7| Homo sapiens chromosome 8, clone RP11-23K11, complete sequence Length = 146952 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 3 tcctgataaaaacacagattaaa 25 |||||||||||||||| |||||| Sbjct: 102198 tcctgataaaaacacatattaaa 102176
>emb|BX663613.13| Zebrafish DNA sequence from clone DKEY-74H3 in linkage group 14, complete sequence Length = 148362 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 6 tgataaaaacacagattaaatag 28 ||||| ||||||||||||||||| Sbjct: 123722 tgatacaaacacagattaaatag 123700
>gb|AC113405.2| Homo sapiens chromosome 5 clone RP11-467C9, complete sequence Length = 134319 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 35 caagatacaaaactatcct 53 ||||||||||||||||||| Sbjct: 97775 caagatacaaaactatcct 97793
>gb|AC060771.8| Homo sapiens chromosome 17, clone RP11-169I9, complete sequence Length = 138969 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 100 aaagaaaaaatcaaacaag 118 ||||||||||||||||||| Sbjct: 72960 aaagaaaaaatcaaacaag 72978
>gb|AC108521.1| Caenorhabditis briggsae cosmid CB004G08, complete sequence Length = 82505 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 58 aatcttgaaaaaatgctca 76 ||||||||||||||||||| Sbjct: 32256 aatcttgaaaaaatgctca 32274
>gb|AC147845.3| Saimiri boliviensis boliviensis clone CH254-335K11, complete sequence Length = 222317 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 88 gttgtagtatgtaaagaaaaaat 110 ||||||||||||||| ||||||| Sbjct: 219777 gttgtagtatgtaaaaaaaaaat 219755
>gb|AC091022.4| Homo sapiens chromosome 8, clone RP11-65A5, complete sequence Length = 155949 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 tcctgataaaaacacagat 21 ||||||||||||||||||| Sbjct: 72529 tcctgataaaaacacagat 72547
>gb|AC091903.2| Homo sapiens chromosome 5 clone RP11-182I21, complete sequence Length = 194860 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 41 acaaaactatcctccaaaa 59 ||||||||||||||||||| Sbjct: 71349 acaaaactatcctccaaaa 71331
>gb|AF303656.1|AF303656 Mus musculus bladder cancer-related protein (BC10) gene, complete cds; and neuronatin protein isoform (nn2) gene, complete cds, alternatively spliced Length = 19373 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 gaaaaaatcaaacaagaaa 121 ||||||||||||||||||| Sbjct: 13911 gaaaaaatcaaacaagaaa 13929
>emb|BX323874.4| Zebrafish DNA sequence from clone DKEY-104N21 in linkage group 16, complete sequence Length = 256605 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 ttaaataggcagggcaaga 39 ||||||||||||||||||| Sbjct: 246874 ttaaataggcagggcaaga 246892
>gb|AC158626.6| Mus musculus 6 BAC RP23-4F16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 240079 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 142 atgtcatcgcatatcataa 160 ||||||||||||||||||| Sbjct: 217871 atgtcatcgcatatcataa 217853
>gb|AC008562.5| Homo sapiens chromosome 5 clone CTC-535M15, complete sequence Length = 127259 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 8 ataaaaacacagattaaat 26 ||||||||||||||||||| Sbjct: 53531 ataaaaacacagattaaat 53549
>gb|AC135087.5| Mus musculus BAC clone RP23-270H16 from chromosome 1, complete sequence Length = 172385 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 ataaaaacacagattaaat 26 ||||||||||||||||||| Sbjct: 168754 ataaaaacacagattaaat 168736
>gb|AC008582.6|AC008582 Homo sapiens chromosome 5 clone CTC-565J21, complete sequence Length = 76008 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 35 caagatacaaaactatcct 53 ||||||||||||||||||| Sbjct: 326 caagatacaaaactatcct 344
>ref|XM_396001.2| PREDICTED: Apis mellifera similar to CG4078-PA (LOC412546), partial mRNA Length = 1755 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 taaagaaaaaatcaaacaa 117 ||||||||||||||||||| Sbjct: 1236 taaagaaaaaatcaaacaa 1254
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 atatcataattcaacacca 170 ||||||||||||||||||| Sbjct: 5644022 atatcataattcaacacca 5644004
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 aagaaaaaatcaaacaaga 119 ||||||||||||||||||| Sbjct: 28995158 aagaaaaaatcaaacaaga 28995176
>gb|AC108012.4| Homo sapiens BAC clone RP13-513D3 from 4, complete sequence Length = 48578 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 56 aaaatcttgaaaaaatgct 74 ||||||||||||||||||| Sbjct: 6334 aaaatcttgaaaaaatgct 6316
>gb|AC158122.6| Mus musculus chromosome 15, clone RP24-174O10, complete sequence Length = 162305 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 99 taaagaaaaaatcaaacaagaaa 121 |||| |||||||||||||||||| Sbjct: 98590 taaaaaaaaaatcaaacaagaaa 98612
>gb|AC104699.2| Homo sapiens BAC clone RP11-579I5 from 2, complete sequence Length = 70445 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 71 tgctcagggctacaggggttgta 93 ||||||||| ||||||||||||| Sbjct: 17738 tgctcaggggtacaggggttgta 17760
>gb|AC159114.7| Mus musculus BAC RP23-370L19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 169393 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 50 tcctccaaaatcttgaaaa 68 ||||||||||||||||||| Sbjct: 76759 tcctccaaaatcttgaaaa 76741
>gb|AC022104.3|AC022104 Homo sapiens chromosome 5 clone CTC-257B12, complete sequence Length = 160703 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 35 caagatacaaaactatcct 53 ||||||||||||||||||| Sbjct: 121480 caagatacaaaactatcct 121462
>gb|AC093279.3| Homo sapiens chromosome 5 clone RP11-3M7, complete sequence Length = 153538 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 99 taaagaaaaaatcaaacaagaaa 121 |||||||||| |||||||||||| Sbjct: 6726 taaagaaaaagtcaaacaagaaa 6748
>gb|AC096565.1| Homo sapiens BAC clone RP11-287O8 from 2, complete sequence Length = 172515 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 56 aaaatcttgaaaaaatgct 74 ||||||||||||||||||| Sbjct: 158998 aaaatcttgaaaaaatgct 158980
>gb|AC138853.2| Homo sapiens chromosome 5 clone RP11-1325J9, complete sequence Length = 174039 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 99 taaagaaaaaatcaaacaagaaa 121 |||||||||| |||||||||||| Sbjct: 39853 taaagaaaaagtcaaacaagaaa 39875
>gb|AC138917.2| Homo sapiens chromosome 5 clone RP11-630I7, complete sequence Length = 154824 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 99 taaagaaaaaatcaaacaagaaa 121 |||||||||| |||||||||||| Sbjct: 54951 taaagaaaaagtcaaacaagaaa 54929
>gb|AE010301.1| Leptospira interrogans serovar Lai str. 56601 chromosome II, complete sequence Length = 358943 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 taaagaaaaaatcaaacaa 117 ||||||||||||||||||| Sbjct: 332937 taaagaaaaaatcaaacaa 332955
>gb|AC073606.19| Homo sapiens 12 BAC RP11-390N6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 145430 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 9 taaaaacacagattaaata 27 ||||||||||||||||||| Sbjct: 129472 taaaaacacagattaaata 129454
>gb|AC064878.9|AC064878 Homo sapiens chromosome 6 clone RP11-13I13, complete sequence Length = 168654 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 89 ttgtagtatgtaaagaaaa 107 ||||||||||||||||||| Sbjct: 66053 ttgtagtatgtaaagaaaa 66071
>emb|BX005069.9| Zebrafish DNA sequence from clone CH211-132P1 in linkage group 14, complete sequence Length = 166320 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 9 taaaaacacagattaaataggca 31 ||||||||||||| ||||||||| Sbjct: 17287 taaaaacacagataaaataggca 17309
>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome Length = 1358633 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 100 aaagaaaaaatcaaacaag 118 ||||||||||||||||||| Sbjct: 673582 aaagaaaaaatcaaacaag 673600
>emb|AL845336.9| Mouse DNA sequence from clone RP23-391P24 on chromosome 2, complete sequence Length = 176778 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 aaaaaatcaaacaagaaag 122 ||||||||||||||||||| Sbjct: 28322 aaaaaatcaaacaagaaag 28340
>dbj|AK068482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153L21, full insert sequence Length = 3108 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 aagaaaaaatcaaacaaga 119 ||||||||||||||||||| Sbjct: 1788 aagaaaaaatcaaacaaga 1806
>gb|AC154532.3| Mus musculus BAC clone RP23-469G7 from 14, complete sequence Length = 193236 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 95 tatgtaaagaaaaaatcaaacaa 117 ||||||||||||||| ||||||| Sbjct: 81161 tatgtaaagaaaaaaacaaacaa 81183
>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0431A02 Length = 165038 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 152 atatcataattcaacacca 170 ||||||||||||||||||| Sbjct: 105714 atatcataattcaacacca 105696
>emb|AL031627.1|CEY102A5C Caenorhabditis elegans YAC Y102A5C, complete sequence Length = 91286 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 55 caaaatcttgaaaaaatgc 73 ||||||||||||||||||| Sbjct: 73594 caaaatcttgaaaaaatgc 73612
>gb|AC118005.9| Mus musculus chromosome 19, clone RP23-318J14, complete sequence Length = 195212 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 104 aaaaaatcaaacaagaaag 122 ||||||||||||||||||| Sbjct: 63592 aaaaaatcaaacaagaaag 63574
>gb|AF023181.1|AF023181 Listeria monocytogenes transcription-repair coupling factor (mfdL), low temperature requirement B protein (ltrB), and DivIC homolog (divL) genes, complete cds Length = 6616 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 taaagaaaaaatcaaacaa 117 ||||||||||||||||||| Sbjct: 2673 taaagaaaaaatcaaacaa 2691
>emb|BX510915.23| Zebrafish DNA sequence from clone DKEY-24M12 in linkage group 21, complete sequence Length = 253718 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 6 tgataaaaacacagattaaatag 28 ||||| ||||||||||||||||| Sbjct: 29173 tgatacaaacacagattaaatag 29195
>gb|AE016824.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome II, complete sequence Length = 350181 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 taaagaaaaaatcaaacaa 117 ||||||||||||||||||| Sbjct: 326086 taaagaaaaaatcaaacaa 326104
>dbj|AP000428.3| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1303B4 Length = 173872 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 104 aaaaaatcaaacaagaaag 122 ||||||||||||||||||| Sbjct: 128619 aaaaaatcaaacaagaaag 128601
>gb|AC153951.3| Mus musculus 10 BAC RP24-480P16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 176067 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 50 tcctccaaaatcttgaaaa 68 ||||||||||||||||||| Sbjct: 171982 tcctccaaaatcttgaaaa 171964
>gb|AC140243.2| Mus musculus BAC clone RP23-470F3 from 9, complete sequence Length = 201295 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 taaagaaaaaatcaaacaa 117 ||||||||||||||||||| Sbjct: 121174 taaagaaaaaatcaaacaa 121156
>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome Length = 4303871 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 100 aaagaaaaaatcaaacaag 118 ||||||||||||||||||| Sbjct: 3441318 aaagaaaaaatcaaacaag 3441300
>emb|BX908745.12| Zebrafish DNA sequence from clone DKEY-208F1 in linkage group 18, complete sequence Length = 81197 Score = 38.2 bits (19), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 6 tgataaaaacacagattaaatag 28 ||||| ||||||||||||||||| Sbjct: 52547 tgatacaaacacagattaaatag 52525
>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome Length = 2905187 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 99 taaagaaaaaatcaaacaa 117 ||||||||||||||||||| Sbjct: 225341 taaagaaaaaatcaaacaa 225359
>gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome Length = 1181404 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 tccaaaatcttgaaaaaat 71 ||||||||||||||||||| Sbjct: 135249 tccaaaatcttgaaaaaat 135231
>emb|AL591478.19| Mouse DNA sequence from clone RP23-140D14 on chromosome 2, complete sequence Length = 236979 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 aatgctcagggctacaggg 87 ||||||||||||||||||| Sbjct: 114226 aatgctcagggctacaggg 114208
>emb|AL672184.13| Mouse DNA sequence from clone RP23-421G11 on chromosome X, complete sequence Length = 211206 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 10 aaaaacacagattaaatag 28 ||||||||||||||||||| Sbjct: 160569 aaaaacacagattaaatag 160551
>dbj|AP003088.1| Staphylococcus aureus TY4, ETB plasmid DNA, complete sequence Length = 38211 Score = 38.2 bits (19), Expect = 8.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 taaagaaaaaatcaaacaa 117 ||||||||||||||||||| Sbjct: 3168 taaagaaaaaatcaaacaa 3150 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,668,458 Number of Sequences: 3902068 Number of extensions: 2668458 Number of successful extensions: 279614 Number of sequences better than 10.0: 121 Number of HSP's better than 10.0 without gapping: 121 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 278761 Number of HSP's gapped (non-prelim): 853 length of query: 173 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 151 effective length of database: 17,147,199,772 effective search space: 2589227165572 effective search space used: 2589227165572 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
