ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl56e09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC144485.2| Gasterosteus aculeatus clone CH213-101E8, complet... 44 0.16
2gb|AC099174.7| Rattus norvegicus 4 BAC CH230-98I1 (Children's Ho... 42 0.62
3gb|AC112777.7| Homo sapiens 12 BAC RP11-424C20 (Roswell Park Can... 42 0.62
4gb|AF186999.4| Homo sapiens chromosome 8 clone CTA-394H5 map 8ce... 40 2.5
5gb|AC117189.3| Mus musculus BAC clone RP23-44D2 from 8, complete... 40 2.5
6gb|AC097507.2| Homo sapiens BAC clone RP11-371E22 from 4, comple... 40 2.5
7gb|AC103956.4| Homo sapiens chromosome 8, clone CTA-394H5, compl... 40 2.5
8gb|AC011128.7| Homo sapiens chromosome 8, clone RP11-119N19, com... 40 2.5
9dbj|BS000070.1| Pan troglodytes chromosome 22 clone:RP43-073J16,... 40 2.5
10dbj|AP001681.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 2.5
11emb|AL671185.8| Mouse DNA sequence from clone RP23-192N1 on chro... 40 2.5
12dbj|AP001137.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 2.5
13gb|AY623193.1| Capanea affinis voucher M. Amaya M. & Smith 393 (... 38 9.7
14gb|AY623186.1| Pearcea hypocyrtiflora voucher Smith 3943 (SRP) c... 38 9.7
15gb|AY623185.1| Pearcea intermedia voucher Smith 3425 (SRP) chlor... 38 9.7
16gb|AY623184.1| Kohleria spicata voucher Skog 7701 (US) chloropla... 38 9.7
17gb|AY623183.1| Kohleria hirsuta voucher SI 94-472 chloroplast gl... 38 9.7
18gb|AY623182.1| Capanea sp. JFS-2004 chloroplast glutamine synthe... 38 9.7
19gb|BC001586.2| Homo sapiens F-box and leucine-rich repeat protei... 38 9.7
20gb|AC132460.3| Mus musculus BAC clone RP23-31O23 from chromosome... 38 9.7
21ref|NM_017703.1| Homo sapiens F-box and leucine-rich repeat prot... 38 9.7
22gb|AY574035.1| Zea mays rust resistance protein rp3-1 (rp3-1) ge... 38 9.7
23emb|BX936452.24| Zebrafish DNA sequence from clone CH211-282C13 ... 38 9.7
24gb|AC146214.2| Pan troglodytes BAC clone CH251-295K11 from Y, co... 38 9.7
25gb|AC005326.2| Homo sapiens PAC clone RP5-1090P18 from 7, comple... 38 9.7
26emb|X06292.1|HSFESFPS Human c-fes/fps proto-oncogene 38 9.7
27emb|Z99289.1|HS142L7 Human DNA sequence from clone RP1-142L7 on ... 38 9.7
28emb|AL392048.9| Human DNA sequence from clone RP11-305D15 on chr... 38 9.7
29emb|CR847931.7| Zebrafish DNA sequence from clone DKEY-182I3 in ... 38 9.7
30gb|AC073352.22| Homo sapiens 3 BAC RP11-190C22 (Roswell Park Can... 38 9.7
31gb|AC177795.2| Mus musculus chromosome 1, clone wi1-2624E11, com... 38 9.7
32gb|AC073583.19| Homo sapiens Xp BAC RP11-483M24 (Roswell Park Ca... 38 9.7
33gb|AC007917.15| Homo sapiens 3 BAC RP11-379C23 (Roswell Park Can... 38 9.7
34emb|AL929329.2| Zebrafish DNA sequence from clone BUSM1-44F21 in... 38 9.7
35emb|BX470081.7| Zebrafish DNA sequence from clone RP71-84P16, co... 38 9.7
36gb|AC008752.6| Homo sapiens chromosome 19 clone CTD-2623N2, comp... 38 9.7
37dbj|BS000531.1| Pan troglodytes chromosome Y clone:PTB-018L03, c... 38 9.7
38gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 38 9.7
39emb|CR614471.1| full-length cDNA clone CS0DD003YI10 of Neuroblas... 38 9.7
40emb|CR614447.1| full-length cDNA clone CS0DK012YK10 of HeLa cell... 38 9.7
41emb|CR613783.1| full-length cDNA clone CS0DI083YD11 of Placenta ... 38 9.7
42emb|CR611669.1| full-length cDNA clone CS0DC002YL21 of Neuroblas... 38 9.7
43emb|CR611175.1| full-length cDNA clone CS0DI008YH22 of Placenta ... 38 9.7
44emb|CR610493.1| full-length cDNA clone CS0DI078YO06 of Placenta ... 38 9.7
45dbj|AK093760.1| Homo sapiens cDNA FLJ36441 fis, clone THYMU20126... 38 9.7
46emb|CR605677.1| full-length cDNA clone CS0DI068YM01 of Placenta ... 38 9.7
47emb|CR592319.1| full-length cDNA clone CS0DK012YE10 of HeLa cell... 38 9.7
48emb|CR590448.1| full-length cDNA clone CS0DF034YG04 of Fetal bra... 38 9.7
49gb|AC104967.4| Homo sapiens chromosome 8, clone CTD-2306F16, com... 38 9.7
50gb|AC005704.1| Homo sapiens X BAC GSHB-227L7 (Genome Systems Hum... 38 9.7
51gb|AC074044.8| Homo sapiens 3q BAC RP11-484K9 (Roswell Park Canc... 38 9.7
52gb|AC079160.5| Homo sapiens BAC clone RP11-176K15 from 4, comple... 38 9.7
53gb|AC012454.8| Homo sapiens BAC clone RP11-439L14 from 2, comple... 38 9.7
54emb|BX511019.6| Zebrafish DNA sequence from clone CH211-89O9 in ... 38 9.7
55gb|AC148315.3| Pan troglodytes BAC clone CH251-530M14 from chrom... 38 9.7
56emb|AL732370.10| Mouse DNA sequence from clone RP23-413I21 on ch... 38 9.7
57dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.7
58dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.7
59gb|AC006998.3|AC006998 Homo sapiens BAC clone RP11-458M9 from Y,... 38 9.7
60dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.7
61gb|AC124248.6| Homo sapiens chromosome 15, clone CTD-3094K11, co... 38 9.7
62gb|AC006207.5| Homo sapiens 12 PAC RPCI3-488H23 (Roswell Park Ca... 38 9.7
63dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.7
64dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge... 38 9.7
65dbj|BS000220.1| Pan troglodytes chromosome 22 clone:PTB-057K02, ... 38 9.7
66emb|BX647073.1|HSM809251 Homo sapiens mRNA; cDNA DKFZp779I1143 (... 38 9.7
67dbj|AP002043.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 38 9.7
68dbj|AK000195.1| Homo sapiens cDNA FLJ20188 fis, clone COLF0561 38 9.7
69dbj|AK027004.1| Homo sapiens cDNA: FLJ23351 fis, clone HEP14009 38 9.7
70dbj|AK072309.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 9.7
71gb|AC154781.2| Mus musculus BAC clone RP24-463K5 from 16, comple... 38 9.7
72emb|AL389936.1|IROEST144 Homo sapiens EST from clone 1609327, 5'... 38 9.7
73emb|AL132994.4|CNS01DU0 Human chromosome 14 DNA sequence BAC R-5... 38 9.7
74dbj|AP001700.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 38 9.7
75emb|CT009658.7| Mouse DNA sequence from clone CH29-505N5 on chro... 38 9.7
76emb|AL935279.5| Zebrafish DNA sequence from clone CH211-195M9 in... 38 9.7
77emb|CR848818.10| Zebrafish DNA sequence from clone DKEY-38O19 in... 38 9.7
78emb|AL772333.5| Mouse DNA sequence from clone RP23-305E1 on chro... 38 9.7
79emb|AL772174.11| Mouse DNA sequence from clone RP23-215D22 on ch... 38 9.7
80dbj|AP001608.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 38 9.7
81emb|AL671331.6| Mouse DNA sequence from clone RP23-126C18 on chr... 38 9.7 
>gb|AC144485.2| Gasterosteus aculeatus clone CH213-101E8, complete sequence
          Length = 203829

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 27    taacgctagctagcaagatagt 48
             ||||||||||||||||||||||
Sbjct: 37032 taacgctagctagcaagatagt 37053
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>gb|AC099174.7| Rattus norvegicus 4 BAC CH230-98I1 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 197530

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 44    atagtaaataaatatttacat 64
             |||||||||||||||||||||
Sbjct: 27822 atagtaaataaatatttacat 27842
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>gb|AC112777.7| Homo sapiens 12 BAC RP11-424C20 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 160380

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 41    aagatagtaaataaatattta 61
             |||||||||||||||||||||
Sbjct: 34728 aagatagtaaataaatattta 34748
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>gb|AF186999.4| Homo sapiens chromosome 8 clone CTA-394H5 map 8cen, complete sequence
          Length = 82674

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   tcttaactgccaagagcaag 161
             ||||||||||||||||||||
Sbjct: 21677 tcttaactgccaagagcaag 21696
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>gb|AC117189.3| Mus musculus BAC clone RP23-44D2 from 8, complete sequence
          Length = 165254

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     tagtaaataaatatttacat 64
              ||||||||||||||||||||
Sbjct: 103055 tagtaaataaatatttacat 103036
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>gb|AC097507.2| Homo sapiens BAC clone RP11-371E22 from 4, complete sequence
          Length = 167032

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 46     agtaaataaatatttacatc 65
              ||||||||||||||||||||
Sbjct: 110108 agtaaataaatatttacatc 110127
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>gb|AC103956.4| Homo sapiens chromosome 8, clone CTA-394H5, complete sequence
          Length = 82676

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   tcttaactgccaagagcaag 161
             ||||||||||||||||||||
Sbjct: 21678 tcttaactgccaagagcaag 21697
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>gb|AC011128.7| Homo sapiens chromosome 8, clone RP11-119N19, complete sequence
          Length = 183978

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    tcttaactgccaagagcaag 161
              ||||||||||||||||||||
Sbjct: 174439 tcttaactgccaagagcaag 174420
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>dbj|BS000070.1| Pan troglodytes chromosome 22 clone:RP43-073J16, map 22, complete
             sequences
          Length = 198903

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    aagatagtaaataaatattt 60
             ||||||||||||||||||||
Sbjct: 23533 aagatagtaaataaatattt 23552
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>dbj|AP001681.1| Homo sapiens genomic DNA, chromosome 21q, section 25/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     aagatagtaaataaatattt 60
              ||||||||||||||||||||
Sbjct: 164324 aagatagtaaataaatattt 164343
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>emb|AL671185.8| Mouse DNA sequence from clone RP23-192N1 on chromosome X, complete
              sequence
          Length = 229574

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 150    gccaagagcaagcaaaccag 169
              ||||||||||||||||||||
Sbjct: 207832 gccaagagcaagcaaaccag 207851
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>dbj|AP001137.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, LL56-APP region,
             clone:B812P3
          Length = 203959

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    aagatagtaaataaatattt 60
             ||||||||||||||||||||
Sbjct: 28665 aagatagtaaataaatattt 28684
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>gb|AY623193.1| Capanea affinis voucher M. Amaya M. & Smith 393 (COL) chloroplast
           glutamine synthetase locus 1 (ncpGS1) gene, complete
           sequence
          Length = 393

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 40  caagatagtaaataaatat 58
           |||||||||||||||||||
Sbjct: 361 caagatagtaaataaatat 343
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>gb|AY623186.1| Pearcea hypocyrtiflora voucher Smith 3943 (SRP) chloroplast
           glutamine synthetase locus 1 (ncpGS1) gene, complete
           sequence
          Length = 490

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 40  caagatagtaaataaatat 58
           |||||||||||||||||||
Sbjct: 457 caagatagtaaataaatat 439
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>gb|AY623185.1| Pearcea intermedia voucher Smith 3425 (SRP) chloroplast glutamine
           synthetase locus 1 (ncpGS1) gene, complete sequence
          Length = 472

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 40  caagatagtaaataaatat 58
           |||||||||||||||||||
Sbjct: 439 caagatagtaaataaatat 421
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>gb|AY623184.1| Kohleria spicata voucher Skog 7701 (US) chloroplast glutamine
           synthetase locus 1 (ncpGS1) gene, complete sequence
          Length = 486

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 40  caagatagtaaataaatat 58
           |||||||||||||||||||
Sbjct: 453 caagatagtaaataaatat 435
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>gb|AY623183.1| Kohleria hirsuta voucher SI 94-472 chloroplast glutamine synthetase
           locus 1 (ncpGS1) gene, complete sequence
          Length = 488

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 40  caagatagtaaataaatat 58
           |||||||||||||||||||
Sbjct: 455 caagatagtaaataaatat 437
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>gb|AY623182.1| Capanea sp. JFS-2004 chloroplast glutamine synthetase locus 1
           (ncpGS1) gene, complete sequence
          Length = 488

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 40  caagatagtaaataaatat 58
           |||||||||||||||||||
Sbjct: 455 caagatagtaaataaatat 437
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>gb|BC001586.2| Homo sapiens F-box and leucine-rich repeat protein 12, mRNA (cDNA
           clone MGC:1070 IMAGE:2966439), complete cds
          Length = 1791

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 96  atgcattcaagcaggggca 114
           |||||||||||||||||||
Sbjct: 661 atgcattcaagcaggggca 643
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>gb|AC132460.3| Mus musculus BAC clone RP23-31O23 from chromosome 17, complete sequence
          Length = 203971

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 47    gtaaataaatatttacatc 65
             |||||||||||||||||||
Sbjct: 29426 gtaaataaatatttacatc 29408
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>ref|NM_017703.1| Homo sapiens F-box and leucine-rich repeat protein 12 (FBXL12),
           mRNA
          Length = 1876

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 96  atgcattcaagcaggggca 114
           |||||||||||||||||||
Sbjct: 709 atgcattcaagcaggggca 691
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>gb|AY574035.1| Zea mays rust resistance protein rp3-1 (rp3-1) gene, complete cds; and
              truncated rust resistance protein rp3-2t (rp3-2) gene,
              complete sequence
          Length = 276326

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 48     taaataaatatttacatca 66
              |||||||||||||||||||
Sbjct: 251966 taaataaatatttacatca 251948
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>emb|BX936452.24| Zebrafish DNA sequence from clone CH211-282C13 in linkage group 13,
             complete sequence
          Length = 136110

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 46    agtaaataaatatttacat 64
             |||||||||||||||||||
Sbjct: 21286 agtaaataaatatttacat 21304
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>gb|AC146214.2| Pan troglodytes BAC clone CH251-295K11 from Y, complete sequence
          Length = 172148

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 42     agatagtaaataaatattt 60
              |||||||||||||||||||
Sbjct: 108573 agatagtaaataaatattt 108555
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>gb|AC005326.2| Homo sapiens PAC clone RP5-1090P18 from 7, complete sequence
          Length = 122130

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 42    agatagtaaataaatattt 60
             |||||||||||||||||||
Sbjct: 72390 agatagtaaataaatattt 72408
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>emb|X06292.1|HSFESFPS Human c-fes/fps proto-oncogene
          Length = 12263

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 42   agatagtaaataaatattt 60
            |||||||||||||||||||
Sbjct: 2349 agatagtaaataaatattt 2331
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>emb|Z99289.1|HS142L7 Human DNA sequence from clone RP1-142L7 on chromosome 6q21 Contains the
             3' end of the WISP3 gene for WNT1 inducible signaling
             pathway protein 3, the gene for epsilon tubulin, two novel
             genes, the 3' end of the LAMA4 gene for laminin alpha 4,
             the 5' end of a novel gene and a CpG island, complete
             sequence
          Length = 190778

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 42    agatagtaaataaatattt 60
             |||||||||||||||||||
Sbjct: 32617 agatagtaaataaatattt 32635
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>emb|AL392048.9| Human DNA sequence from clone RP11-305D15 on chromosome 13 Contains the
             5' end of the RB1 gene for retinoblastoma 1 (including
             osteosarcoma), two novel genes, the gene for purinergic
             receptor (family A group 5) (P2Y5), a PEST-containing
             nuclear protein (PCNP) pseudogene, a KIAA0649 gene product
             pseudogene, the 3' end of a novel gene and three CpG
             islands, complete sequence
          Length = 137342

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 46    agtaaataaatatttacat 64
             |||||||||||||||||||
Sbjct: 10919 agtaaataaatatttacat 10937
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>emb|CR847931.7| Zebrafish DNA sequence from clone DKEY-182I3 in linkage group 15,
             complete sequence
          Length = 134584

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 45    tagtaaataaatatttacatcag 67
             ||||||||||||||| |||||||
Sbjct: 65676 tagtaaataaatattcacatcag 65654
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>gb|AC073352.22| Homo sapiens 3 BAC RP11-190C22 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 159738

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 120  aataatgaatcttggccct 138
            |||||||||||||||||||
Sbjct: 2227 aataatgaatcttggccct 2209
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>gb|AC177795.2| Mus musculus chromosome 1, clone wi1-2624E11, complete sequence
          Length = 41084

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 42    agatagtaaataaatattt 60
             |||||||||||||||||||
Sbjct: 12788 agatagtaaataaatattt 12770
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>gb|AC073583.19| Homo sapiens Xp BAC RP11-483M24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 179187

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 42     agatagtaaataaatattt 60
              |||||||||||||||||||
Sbjct: 159714 agatagtaaataaatattt 159732
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>gb|AC007917.15| Homo sapiens 3 BAC RP11-379C23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 186968

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 144    ttaactgccaagagcaagc 162
              |||||||||||||||||||
Sbjct: 133230 ttaactgccaagagcaagc 133248
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>emb|AL929329.2| Zebrafish DNA sequence from clone BUSM1-44F21 in linkage group 7
             Contains four CpG islands, complete sequence
          Length = 75828

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 35    gctagcaagatagtaaataaata 57
             ||||||||||||| |||||||||
Sbjct: 18846 gctagcaagatagcaaataaata 18868
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>emb|BX470081.7| Zebrafish DNA sequence from clone RP71-84P16, complete sequence
          Length = 84546

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 46    agtaaataaatatttacat 64
             |||||||||||||||||||
Sbjct: 38145 agtaaataaatatttacat 38163
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>gb|AC008752.6| Homo sapiens chromosome 19 clone CTD-2623N2, complete sequence
          Length = 138036

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 96    atgcattcaagcaggggca 114
             |||||||||||||||||||
Sbjct: 43655 atgcattcaagcaggggca 43637
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>dbj|BS000531.1| Pan troglodytes chromosome Y clone:PTB-018L03, complete sequences
          Length = 161297

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 42    agatagtaaataaatattt 60
             |||||||||||||||||||
Sbjct: 91490 agatagtaaataaatattt 91508
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 42       agatagtaaataaatattt 60
                |||||||||||||||||||
Sbjct: 19893186 agatagtaaataaatattt 19893168
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>emb|CR614471.1| full-length cDNA clone CS0DD003YI10 of Neuroblastoma Cot
           50-normalized of Homo sapiens (human)
          Length = 1588

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 96  atgcattcaagcaggggca 114
           |||||||||||||||||||
Sbjct: 467 atgcattcaagcaggggca 449
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>emb|CR614447.1| full-length cDNA clone CS0DK012YK10 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 1505

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 96  atgcattcaagcaggggca 114
           |||||||||||||||||||
Sbjct: 407 atgcattcaagcaggggca 389
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>emb|CR613783.1| full-length cDNA clone CS0DI083YD11 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1542

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 96  atgcattcaagcaggggca 114
           |||||||||||||||||||
Sbjct: 431 atgcattcaagcaggggca 413
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>emb|CR611669.1| full-length cDNA clone CS0DC002YL21 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 1594

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 96  atgcattcaagcaggggca 114
           |||||||||||||||||||
Sbjct: 467 atgcattcaagcaggggca 449
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>emb|CR611175.1| full-length cDNA clone CS0DI008YH22 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1568

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 96  atgcattcaagcaggggca 114
           |||||||||||||||||||
Sbjct: 467 atgcattcaagcaggggca 449
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>emb|CR610493.1| full-length cDNA clone CS0DI078YO06 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1673

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 96  atgcattcaagcaggggca 114
           |||||||||||||||||||
Sbjct: 562 atgcattcaagcaggggca 544
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>dbj|AK093760.1| Homo sapiens cDNA FLJ36441 fis, clone THYMU2012625, highly similar
           to Mus musculus F-box protein FBL12 mRNA
          Length = 1842

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 96  atgcattcaagcaggggca 114
           |||||||||||||||||||
Sbjct: 704 atgcattcaagcaggggca 686
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>emb|CR605677.1| full-length cDNA clone CS0DI068YM01 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1557

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 96  atgcattcaagcaggggca 114
           |||||||||||||||||||
Sbjct: 474 atgcattcaagcaggggca 456
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>emb|CR592319.1| full-length cDNA clone CS0DK012YE10 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 1505

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 96  atgcattcaagcaggggca 114
           |||||||||||||||||||
Sbjct: 407 atgcattcaagcaggggca 389
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>emb|CR590448.1| full-length cDNA clone CS0DF034YG04 of Fetal brain of Homo sapiens
           (human)
          Length = 1607

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 96  atgcattcaagcaggggca 114
           |||||||||||||||||||
Sbjct: 467 atgcattcaagcaggggca 449
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>gb|AC104967.4| Homo sapiens chromosome 8, clone CTD-2306F16, complete sequence
          Length = 144098

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 46    agtaaataaatatttacat 64
             |||||||||||||||||||
Sbjct: 64198 agtaaataaatatttacat 64180
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>gb|AC005704.1| Homo sapiens X BAC GSHB-227L7 (Genome Systems Human BAC Library)
             complete sequence
          Length = 99033

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 42    agatagtaaataaatattt 60
             |||||||||||||||||||
Sbjct: 75324 agatagtaaataaatattt 75306
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>gb|AC074044.8| Homo sapiens 3q BAC RP11-484K9 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 194006

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 41   aagatagtaaataaatatt 59
            |||||||||||||||||||
Sbjct: 5493 aagatagtaaataaatatt 5511
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>gb|AC079160.5| Homo sapiens BAC clone RP11-176K15 from 4, complete sequence
          Length = 147727

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 75    gggaagggctaaggatcaa 93
             |||||||||||||||||||
Sbjct: 30047 gggaagggctaaggatcaa 30065
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>gb|AC012454.8| Homo sapiens BAC clone RP11-439L14 from 2, complete sequence
          Length = 185512

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 41     aagatagtaaataaatatt 59
              |||||||||||||||||||
Sbjct: 116762 aagatagtaaataaatatt 116780
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>emb|BX511019.6| Zebrafish DNA sequence from clone CH211-89O9 in linkage group 1,
             complete sequence
          Length = 180744

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 44    atagtaaataaatatttac 62
             |||||||||||||||||||
Sbjct: 15187 atagtaaataaatatttac 15169
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>gb|AC148315.3| Pan troglodytes BAC clone CH251-530M14 from chromosome 7, complete
              sequence
          Length = 175627

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 42     agatagtaaataaatattt 60
              |||||||||||||||||||
Sbjct: 174430 agatagtaaataaatattt 174448
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>emb|AL732370.10| Mouse DNA sequence from clone RP23-413I21 on chromosome X, complete
             sequence
          Length = 199391

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 48    taaataaatatttacatca 66
             |||||||||||||||||||
Sbjct: 96798 taaataaatatttacatca 96780
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 25       actaacgctagctagcaag 43
                |||||||||||||||||||
Sbjct: 29493052 actaacgctagctagcaag 29493070
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 127      aatcttggccctaaatctt 145
                |||||||||||||||||||
Sbjct: 40693003 aatcttggccctaaatctt 40692985
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>gb|AC006998.3|AC006998 Homo sapiens BAC clone RP11-458M9 from Y, complete sequence
          Length = 144260

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 42     agatagtaaataaatattt 60
              |||||||||||||||||||
Sbjct: 129948 agatagtaaataaatattt 129966
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>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0093F16
          Length = 160925

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 127    aatcttggccctaaatctt 145
              |||||||||||||||||||
Sbjct: 134981 aatcttggccctaaatctt 134963
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>gb|AC124248.6| Homo sapiens chromosome 15, clone CTD-3094K11, complete sequence
          Length = 142201

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 42     agatagtaaataaatattt 60
              |||||||||||||||||||
Sbjct: 128864 agatagtaaataaatattt 128846
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>gb|AC006207.5| Homo sapiens 12 PAC RPCI3-488H23 (Roswell Park Cancer Institute Human
             PAC Library) complete sequence
          Length = 109003

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 43    gatagtaaataaatattta 61
             |||||||||||||||||||
Sbjct: 67749 gatagtaaataaatattta 67767
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>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1038_A06
          Length = 147836

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 25    actaacgctagctagcaag 43
             |||||||||||||||||||
Sbjct: 88082 actaacgctagctagcaag 88100
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>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 49      aaataaatatttacatcag 67
               |||||||||||||||||||
Sbjct: 1830638 aaataaatatttacatcag 1830656
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>dbj|BS000220.1| Pan troglodytes chromosome 22 clone:PTB-057K02, map 22, complete
              sequences
          Length = 150817

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 44     atagtaaataaatatttac 62
              |||||||||||||||||||
Sbjct: 101067 atagtaaataaatatttac 101049
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>emb|BX647073.1|HSM809251 Homo sapiens mRNA; cDNA DKFZp779I1143 (from clone DKFZp779I1143)
          Length = 1750

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 96  atgcattcaagcaggggca 114
           |||||||||||||||||||
Sbjct: 594 atgcattcaagcaggggca 576
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>dbj|AP002043.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MJI6
          Length = 83912

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 46    agtaaataaatatttacat 64
             |||||||||||||||||||
Sbjct: 51694 agtaaataaatatttacat 51676
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>dbj|AK000195.1| Homo sapiens cDNA FLJ20188 fis, clone COLF0561
          Length = 1876

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 96  atgcattcaagcaggggca 114
           |||||||||||||||||||
Sbjct: 709 atgcattcaagcaggggca 691
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>dbj|AK027004.1| Homo sapiens cDNA: FLJ23351 fis, clone HEP14009
          Length = 1934

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 96  atgcattcaagcaggggca 114
           |||||||||||||||||||
Sbjct: 777 atgcattcaagcaggggca 759
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>dbj|AK072309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022C23, full
            insert sequence
          Length = 3151

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 127  aatcttggccctaaatctt 145
            |||||||||||||||||||
Sbjct: 2881 aatcttggccctaaatctt 2863
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>gb|AC154781.2| Mus musculus BAC clone RP24-463K5 from 16, complete sequence
          Length = 173258

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 45     tagtaaataaatatttaca 63
              |||||||||||||||||||
Sbjct: 128025 tagtaaataaatatttaca 128043
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>emb|AL389936.1|IROEST144 Homo sapiens EST from clone 1609327, 5' end
          Length = 789

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 96  atgcattcaagcaggggca 114
           |||||||||||||||||||
Sbjct: 492 atgcattcaagcaggggca 474
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>emb|AL132994.4|CNS01DU0 Human chromosome 14 DNA sequence BAC R-506K19 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 180273

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 37     tagcaagatagtaaataaa 55
              |||||||||||||||||||
Sbjct: 125869 tagcaagatagtaaataaa 125887
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>dbj|AP001700.1| Homo sapiens genomic DNA, chromosome 21q, section 44/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 44     atagtaaataaatatttac 62
              |||||||||||||||||||
Sbjct: 126620 atagtaaataaatatttac 126602
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>emb|CT009658.7| Mouse DNA sequence from clone CH29-505N5 on chromosome 17, complete
              sequence
          Length = 190153

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 47     gtaaataaatatttacatc 65
              |||||||||||||||||||
Sbjct: 148908 gtaaataaatatttacatc 148890
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>emb|AL935279.5| Zebrafish DNA sequence from clone CH211-195M9 in linkage group 24,
              complete sequence
          Length = 193366

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 49     aaataaatatttacatcagggtg 71
              |||||||||||| ||||||||||
Sbjct: 148341 aaataaatattttcatcagggtg 148363
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>emb|CR848818.10| Zebrafish DNA sequence from clone DKEY-38O19 in linkage group 16,
             complete sequence
          Length = 208738

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 49    aaataaatatttacatcag 67
             |||||||||||||||||||
Sbjct: 30323 aaataaatatttacatcag 30305
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>emb|AL772333.5| Mouse DNA sequence from clone RP23-305E1 on chromosome 1, complete
              sequence
          Length = 142174

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 42     agatagtaaataaatattt 60
              |||||||||||||||||||
Sbjct: 122497 agatagtaaataaatattt 122479
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>emb|AL772174.11| Mouse DNA sequence from clone RP23-215D22 on chromosome 4, complete
             sequence
          Length = 178996

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 138   taaatcttaactgccaaga 156
             |||||||||||||||||||
Sbjct: 95301 taaatcttaactgccaaga 95319
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>dbj|AP001608.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1919E1, APP-D21S292
             region, complete sequence
          Length = 158485

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 44    atagtaaataaatatttac 62
             |||||||||||||||||||
Sbjct: 32377 atagtaaataaatatttac 32359
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>emb|AL671331.6| Mouse DNA sequence from clone RP23-126C18 on chromosome X, complete
             sequence
          Length = 107095

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 42    agatagtaaataaatatttacat 64
             ||||||||||||||| |||||||
Sbjct: 96629 agatagtaaataaatctttacat 96651


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,959,704
Number of Sequences: 3902068
Number of extensions: 1959704
Number of successful extensions: 160908
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 160560
Number of HSP's gapped (non-prelim): 348
length of query: 196
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 174
effective length of database: 17,147,199,772
effective search space: 2983612760328
effective search space used: 2983612760328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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