Clone Name | rbastl56e05 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PTN22_MOUSE (P29352) Tyrosine-protein phosphatase non-receptor t... | 28 | 4.1 | 2 | TAL_YERPS (Q66ET5) Transaldolase (EC 2.2.1.2) | 28 | 5.4 | 3 | TAL_YERPE (Q8ZIN2) Transaldolase (EC 2.2.1.2) | 28 | 5.4 | 4 | DPO1_TREPA (P74933) DNA polymerase I (EC 2.7.7.7) (POL I) | 28 | 7.0 | 5 | LCTL_HUMAN (Q6UWM7) Lactase-like protein precursor (Klotho/lacta... | 27 | 9.1 |
---|
>PTN22_MOUSE (P29352) Tyrosine-protein phosphatase non-receptor type 22 (EC| 3.1.3.48) (Hematopoietic cell protein-tyrosine phosphatase 70Z-PEP) Length = 802 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/50 (34%), Positives = 26/50 (52%) Frame = +2 Query: 47 MSMRGIFSQRCKITSIQKEKKKISKPTSDLLKISMFTTKKKDIRVYPSTL 196 M R I Q K QK+K + S+ LK+ +TK K ++YP+T+ Sbjct: 1 MDQREILQQLLK--EAQKKKLNSEEFASEFLKLKRQSTKYKADKIYPTTV 48
>TAL_YERPS (Q66ET5) Transaldolase (EC 2.2.1.2)| Length = 317 Score = 28.1 bits (61), Expect = 5.4 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%) Frame = +1 Query: 37 FLLHEYEGDLFSAMQDYFNSKGKKKNFQTNI*PSEDINV--------YHKKKGYQGLPIN 192 FL+ + G + D++ + G +K F PSED V Y+KK GY+ + + Sbjct: 173 FLISPFVGRIL----DWYKANGDQKEFA----PSEDPGVVSVTEIYQYYKKHGYKTVVMG 224 Query: 193 TSILNL 210 S NL Sbjct: 225 ASFRNL 230
>TAL_YERPE (Q8ZIN2) Transaldolase (EC 2.2.1.2)| Length = 317 Score = 28.1 bits (61), Expect = 5.4 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%) Frame = +1 Query: 37 FLLHEYEGDLFSAMQDYFNSKGKKKNFQTNI*PSEDINV--------YHKKKGYQGLPIN 192 FL+ + G + D++ + G +K F PSED V Y+KK GY+ + + Sbjct: 173 FLISPFVGRIL----DWYKANGDQKEFA----PSEDPGVVSVTEIYQYYKKHGYKTVVMG 224 Query: 193 TSILNL 210 S NL Sbjct: 225 ASFRNL 230
>DPO1_TREPA (P74933) DNA polymerase I (EC 2.7.7.7) (POL I)| Length = 997 Score = 27.7 bits (60), Expect = 7.0 Identities = 19/58 (32%), Positives = 30/58 (51%) Frame = +1 Query: 40 LLHEYEGDLFSAMQDYFNSKGKKKNFQTNI*PSEDINVYHKKKGYQGLPINTSILNLL 213 L+ +YE D+FS FN G K QT + +++++ KK QG + S+L L Sbjct: 633 LIQQYEHDIFSLAGHEFNI-GSPKQLQTVL--FQELHLPPGKKNTQGYSTDHSVLKKL 687
>LCTL_HUMAN (Q6UWM7) Lactase-like protein precursor (Klotho/lactase-phlorizin| hydrolase-related protein) Length = 567 Score = 27.3 bits (59), Expect = 9.1 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = +2 Query: 56 RGIFSQRCKITSIQKEKKKISKPTSDLLKISMFTTKKKDIRVYPS 190 +G+ R + S+Q+ K K TSD L + FTT+ R YPS Sbjct: 314 QGLEMSRLPVFSLQE--KSYIKGTSDFLGLGHFTTRYITERNYPS 356 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,752,199 Number of Sequences: 219361 Number of extensions: 755258 Number of successful extensions: 1638 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1612 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1638 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 1391514312 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)