>YGB5_YEAST (P33199) Hypothetical 15.0 kDa protein in PDR6-PDR1 intergenic|
           region
          Length = 130

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 37  DISSTCFQNLASHDKLSAHYFLDPASNTI 123
           D+ S CF N    D LS + FL P S+ +
Sbjct: 72  DVDSLCFSNCFQPDALSGNVFLPPRSSNM 100

>K6PF2_SYNY3 (Q55988) 6-phosphofructokinase 2 (EC 2.7.1.11) (Phosphofructokinase|
           2) (Phosphohexokinase 2)
          Length = 384

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
 Frame = -3

Query: 284 LLQAFASEDGQYAVKMLLSGGL-IVVIPRITPCLSL*L---AVLLFVTVRRSGLMSLSIV 117
           ++Q    + G   +   ++GG  I++IP ITPCL+  +        + +R+SG     IV
Sbjct: 184 IVQVMGRDAGHLTLHAGIAGGADIILIPEITPCLTSEIIRNCCYQLMNLRKSGRHFALIV 243

Query: 116 LDAG 105
           +  G
Sbjct: 244 ISEG 247

>ZNF73_HUMAN (O43830) Zinc finger protein 73 (Zinc finger protein 186) (hZNF2)|
          Length = 326

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +2

Query: 5   SQAGYLTLHNKIFHQHASKTWQVMISCQHIISWIQHLTR*T 127
           SQ  YLT+H      H + TWQ   +C H      H ++ T
Sbjct: 183 SQKSYLTIH------HRTHTWQKPYACDHCEKAFSHKSKLT 217

>TRIM6_HUMAN (Q9C030) Tripartite motif protein 6 (RING finger protein 89)|
          Length = 488

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -3

Query: 377 RHTAPGSRSIRRVLCHEAPKVQAQVAFNAGKLLQAFASEDGQ 252
           RH A   R +R V+     +++A +  + G+ LQ F  EDG+
Sbjct: 72  RHLANIVRRLREVVLGPGKQLKAVLCADHGEKLQLFCQEDGK 113

>RDRP_ACLSA (P54891) RNA-directed RNA polymerase (EC 2.7.7.48) (RNA replicase)|
            (216.5 kDa protein) (ORF1)
          Length = 1885

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +1

Query: 28   TQQDISSTCFQNLASHDKLSAHYFLDPASNTIDRLISP---ERRTVTN-NNTASYSDRHG 195
            T  D      QNL   D  SAH+F++   N I+ ++ P   E+   +N  N  ++ +  G
Sbjct: 1210 TMNDFIGIDEQNLIYKDMPSAHHFMENKGNHIEVILVPSMIEKELYSNYGNVMTFGESQG 1269

Query: 196  V 198
            +
Sbjct: 1270 L 1270

>Y092_METJA (Q57557) Putative iron-sulfur protein MJ0092|
          Length = 489

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -3

Query: 332 HEAPKVQAQVAFNAGKLLQAFASEDGQYAVKMLLSGGLIVVIPRITPC 189
           + A   + +VAF  G L+       G+ A+K+L + G+ VVIP+   C
Sbjct: 253 YPAESEKLRVAFFTGCLVDFRLQNVGKDAIKVLNAHGVSVVIPKNQVC 300

>PARC_HUMAN (Q8IWT3) p53-associated parkin-like cytoplasmic protein|
           (UbcH7-associated protein 1)
          Length = 2517

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -3

Query: 350 IRRVLCHEAPKVQAQVAFNAGKLLQAFASEDGQYAVKMLLS 228
           +  +LC+  P+++     +AGK+LQA A+ D      +LLS
Sbjct: 171 LMHMLCNPEPQIRR----SAGKMLQALAAHDAGSRAHVLLS 207

>Y1067_METMP (Q6LYC4) Putative iron-sulfur protein MMP1067|
          Length = 494

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = -3

Query: 308 QVAFNAGKLLQAFASEDGQYAVKMLLSGGLIVVIPRITPC 189
           +VAF  G L+     E G+ A+++L + G+ V+IP+   C
Sbjct: 264 RVAFFTGCLVDFRLQEIGKSAIRVLNAHGVSVIIPKNQVC 303

>Y109_MYCPN (P75453) Protein MPN109 (C09_orf165)|
          Length = 165

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 22/69 (31%), Positives = 31/69 (44%)
 Frame = +1

Query: 25  ITQQDISSTCFQNLASHDKLSAHYFLDPASNTIDRLISPERRTVTNNNTASYSDRHGVIL 204
           I Q+D    C+Q+L  H + S  Y LD  +NT   L       +         + HGV +
Sbjct: 11  INQKD----CWQSLIDHKERS--YSLDFVNNTEKEL------PLIYGYEVKDFENHGVKI 58

Query: 205 GITTIRPPD 231
           G TT +P D
Sbjct: 59  GYTTCKPSD 67


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,998,014
Number of Sequences: 219361
Number of extensions: 1089324
Number of successful extensions: 2716
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2716
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 1391514312
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)