Clone Name | rbastl56d11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | FA11_HUMAN (P03951) Coagulation factor XI precursor (EC 3.4.21.2... | 30 | 1.5 | 2 | FATA_CORSA (Q42712) Oleoyl-acyl carrier protein thioesterase, ch... | 28 | 7.4 | 3 | YHGN_SHIFL (P67145) UPF0056 inner membrane protein yhgN | 27 | 9.7 | 4 | YHGN_ECOLI (P67143) UPF0056 inner membrane protein yhgN | 27 | 9.7 | 5 | YHGN_ECO57 (P67144) UPF0056 inner membrane protein yhgN | 27 | 9.7 |
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>FA11_HUMAN (P03951) Coagulation factor XI precursor (EC 3.4.21.27) (Plasma| thromboplastin antecedent) (PTA) (FXI) [Contains: Coagulation factor XIa heavy chain; Coagulation factor XIa light chain] Length = 625 Score = 30.0 bits (66), Expect = 1.5 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 3/33 (9%) Frame = -3 Query: 94 QVLLHTSPKFTRHVCGDQIL---WL*RSSICFF 5 QV LHT+ RH+CG I+ W+ ++ CF+ Sbjct: 402 QVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFY 434
>FATA_CORSA (Q42712) Oleoyl-acyl carrier protein thioesterase, chloroplast| precursor (EC 3.1.2.14) (18:0-acyl-carrier protein thioesterase) (18:0-ACP thioesterase) (Acyl-[acyl-carrier protein] hydrolase) (Fragment) Length = 369 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = +3 Query: 3 QKKQIDERYNHKIWSPQT*RVNLGEVCNKTCRKINKL 113 QK D R + ++ P+T R++ E NK+ +KI+KL Sbjct: 205 QKVSDDVRDEYLVFCPKTPRLSFPEENNKSLKKISKL 241
>YHGN_SHIFL (P67145) UPF0056 inner membrane protein yhgN| Length = 197 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -3 Query: 127 VDQANNLLIFLQVLLHTSPKFTRHVCGDQIL 35 +D NL IF+ VL HT PK R + ++L Sbjct: 15 MDPLGNLPIFMSVLKHTEPKRRRAIMVRELL 45
>YHGN_ECOLI (P67143) UPF0056 inner membrane protein yhgN| Length = 197 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -3 Query: 127 VDQANNLLIFLQVLLHTSPKFTRHVCGDQIL 35 +D NL IF+ VL HT PK R + ++L Sbjct: 15 MDPLGNLPIFMSVLKHTEPKRRRAIMVRELL 45
>YHGN_ECO57 (P67144) UPF0056 inner membrane protein yhgN| Length = 197 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -3 Query: 127 VDQANNLLIFLQVLLHTSPKFTRHVCGDQIL 35 +D NL IF+ VL HT PK R + ++L Sbjct: 15 MDPLGNLPIFMSVLKHTEPKRRRAIMVRELL 45 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,069,853 Number of Sequences: 219361 Number of extensions: 571914 Number of successful extensions: 1386 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1376 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1386 length of database: 80,573,946 effective HSP length: 86 effective length of database: 61,708,900 effective search space used: 1481013600 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)