>gb|AC153530.9| Mus musculus 10 BAC RP23-202A18 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 192392

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 281   ctccttgtactccgcctcttcctccttgtc 310
             |||||||| |||| ||||||||||||||||
Sbjct: 65710 ctccttgtcctcctcctcttcctccttgtc 65681

>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 295     cctcttcctccttgtcgctctc 316
               ||||||||||||||||||||||
Sbjct: 1553399 cctcttcctccttgtcgctctc 1553378

>ref|NM_114861.2| Arabidopsis thaliana unknown protein AT3G50010 mRNA, complete cds
          Length = 2419

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 94   gcagaaagatcaacaaattat 114
            |||||||||||||||||||||
Sbjct: 1267 gcagaaagatcaacaaattat 1287

>gb|AC133087.3| Mus musculus BAC clone RP24-135I21 from chromosome 13, complete
             sequence
          Length = 157768

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 266   ctcctccgcctcaatctccttgtactccgcctcttcctcct 306
             ||||||| |||| |||||||| | |||| ||||||||||||
Sbjct: 93885 ctcctcctcctctatctccttctcctcctcctcttcctcct 93845

>gb|AC124454.4| Mus musculus BAC clone RP24-228I9 from chromosome 14, complete sequence
          Length = 155657

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 157    tacacaacaggcaacagaaaa 177
              |||||||||||||||||||||
Sbjct: 140904 tacacaacaggcaacagaaaa 140924

>emb|AL132978.1|ATF3A4 Arabidopsis thaliana DNA chromosome 3, BAC clone F3A4
          Length = 108158

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 94    gcagaaagatcaacaaattat 114
             |||||||||||||||||||||
Sbjct: 35653 gcagaaagatcaacaaattat 35633

>emb|BX824427.1|CNS0A7ED Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH48ZD04 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2426

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 94   gcagaaagatcaacaaattat 114
            |||||||||||||||||||||
Sbjct: 1274 gcagaaagatcaacaaattat 1294

>emb|Z99281.1|CEY57G11C Caenorhabditis elegans YAC Y57G11C, complete sequence
          Length = 313573

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 4      agaaaaaacaaattgatgaac 24
              |||||||||||||||||||||
Sbjct: 199517 agaaaaaacaaattgatgaac 199497

>emb|AL807778.10| Mouse DNA sequence from clone RP23-198G1 on chromosome 2, complete
              sequence
          Length = 203518

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 311    gctctcctccccgcctctcag 331
              |||||||||||||||||||||
Sbjct: 178990 gctctcctccccgcctctcag 179010

>gb|AC161194.14| Mus musculus chromosome 15, clone RP23-345C13, complete sequence
          Length = 193998

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 302    ctccttgtcgctctcctccc 321
              ||||||||||||||||||||
Sbjct: 158582 ctccttgtcgctctcctccc 158601

>gb|AC113444.9| Mus musculus chromosome 15, clone RP23-268C9, complete sequence
          Length = 189539

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 167    gcaacagaaaatgaacagag 186
              ||||||||||||||||||||
Sbjct: 149673 gcaacagaaaatgaacagag 149654

>gb|AY713945.1| Gasterosteus aculeatus MHC class II antigen gene cluster, complete
             sequence
          Length = 99318

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                             
Query: 289   actccgcctcttcctccttgtcg-ctctcctc 319
             ||||| ||||||||||||||||| ||||||||
Sbjct: 91966 actcctcctcttcctccttgtcgtctctcctc 91997

>ref|XM_866934.1| PREDICTED: Bos taurus similar to olfactory receptor 975
           (LOC615194), partial mRNA
          Length = 417

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 241 caatttcttctgtgacatcc 260
           ||||||||||||||||||||
Sbjct: 351 caatttcttctgtgacatcc 370

>ref|XM_610504.2| PREDICTED: Bos taurus similar to olfactory receptor Olr1330
           (LOC531999), mRNA
          Length = 933

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 241 caatttcttctgtgacatcc 260
           ||||||||||||||||||||
Sbjct: 519 caatttcttctgtgacatcc 538

>ref|XM_870368.1| PREDICTED: Bos taurus similar to olfactory receptor Olr1330
           (LOC618038), mRNA
          Length = 933

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 241 caatttcttctgtgacatcc 260
           ||||||||||||||||||||
Sbjct: 519 caatttcttctgtgacatcc 538

>ref|XM_867973.1| PREDICTED: Bos taurus similar to olfactory receptor Olr1330
           (LOC616013), mRNA
          Length = 933

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 241 caatttcttctgtgacatcc 260
           ||||||||||||||||||||
Sbjct: 519 caatttcttctgtgacatcc 538

>ref|XM_366178.1| Magnaporthe grisea 70-15 chromosome IV hypothetical protein
           (MG10397.4) partial mRNA
          Length = 894

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 266 ctcctccgcctcaatctcct 285
           ||||||||||||||||||||
Sbjct: 882 ctcctccgcctcaatctcct 863

>gb|AC146126.3| Pan troglodytes BAC clone RP43-23E20 from 7, complete sequence
          Length = 173381

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    caataaaacttgcagaaaga 102
             ||||||||||||||||||||
Sbjct: 65924 caataaaacttgcagaaaga 65905

>gb|AY547323.1| Gallus gallus prolactin receptor gene, complete cds
          Length = 34986

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 250   ctgtgacatccaccaactcc 269
             ||||||||||||||||||||
Sbjct: 29873 ctgtgacatccaccaactcc 29892

>ref|XM_822772.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.61.3110)
           partial mRNA
          Length = 786

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 39  atttggtctccacaaacatgacgg 62
           ||||||||||||| ||||||||||
Sbjct: 657 atttggtctccacgaacatgacgg 634

>ref|XM_381775.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01599.1)
           partial mRNA
          Length = 4044

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 280 tctccttgtactccgcctcttcctccttgtcg 311
           ||||||||||||||| ||| ||||||| ||||
Sbjct: 706 tctccttgtactccgtctcctcctcctcgtcg 675

>gb|AC073521.5| Homo sapiens BAC clone RP11-806J6 from 7, complete sequence
          Length = 81694

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    caataaaacttgcagaaaga 102
             ||||||||||||||||||||
Sbjct: 47345 caataaaacttgcagaaaga 47326

>emb|AL356481.16| Human DNA sequence from clone RP11-216B9 on chromosome 9 Contains the 3'
              end of the GLE1L gene for GLE1 RNA export mediator-like
              (yeast),  the SPTAN1 gene for spectrin, alpha,
              non-erythrocytic 1 (alpha-fodrin) ((ALPHA)II-SPECTRIN),  a
              novel gene (MGC20486), a pseudogene similar to part of
              vesicle transport through interaction with t-SNAREs homolog
              1B (yeast) (VTI1B), two novel genes, the 5' end of the SET
              gene for SET translocation (myeloid leukemia-associated)
              (2PP2A, I2PP2A, PHAPII, TAF-IBETA) and three CpG islands,
              complete sequence
          Length = 175666

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 202    ttcttgtgtgctttcactcc 221
              ||||||||||||||||||||
Sbjct: 129587 ttcttgtgtgctttcactcc 129568

>gb|AC114300.2| Homo sapiens chromosome 5 clone RP11-136H13, complete sequence
          Length = 151166

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    aaaatttggtctccacaaac 55
             ||||||||||||||||||||
Sbjct: 86899 aaaatttggtctccacaaac 86880

>gb|AC091675.5| Homo sapiens chromosome 8, clone RP11-384C12, complete sequence
          Length = 128341

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 240    acaatttcttctgtgacatccacc 263
              |||||||| |||||||||||||||
Sbjct: 124289 acaatttcctctgtgacatccacc 124312

>dbj|AB232920.1| Oryzias latipes hox gene cluster, complete cds, contains hoxBa, evx
              homologue on hoxBa
          Length = 235883

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    ctccgcctcttcctccttgt 309
              ||||||||||||||||||||
Sbjct: 196565 ctccgcctcttcctccttgt 196584

>gb|AC129342.5| Rattus norvegicus  BAC CH230-229B21 (Children's Hospital Oakland
             Research Institute Rat (BN/SsNHsd/MCW) BAC library)
             complete sequence
          Length = 224257

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 279   atctccttgtactccgcctcttcctcct 306
             ||||||||| ||||| ||||||||||||
Sbjct: 35703 atctccttgaactcctcctcttcctcct 35676

>gb|AC019140.5| Homo sapiens BAC clone RP11-681E16 from 2, complete sequence
          Length = 172868

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    tacacaacaggcaacagaaa 176
              ||||||||||||||||||||
Sbjct: 155435 tacacaacaggcaacagaaa 155416

>gb|AF039050.2| Caenorhabditis elegans cosmid B0213, complete sequence
          Length = 39134

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 158  acacaacaggcaacagaaaatgaa 181
            |||||||||| |||||||||||||
Sbjct: 5704 acacaacagggaacagaaaatgaa 5727

>gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster, complete genome
          Length = 1267782

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 79      tgtgcaataaaacttgcaga 98
               ||||||||||||||||||||
Sbjct: 1234499 tgtgcaataaaacttgcaga 1234518

>gb|AC015564.13| Homo sapiens chromosome 8, clone RP11-351D9, complete sequence
          Length = 193425

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 240    acaatttcttctgtgacatccacc 263
              |||||||| |||||||||||||||
Sbjct: 167822 acaatttcctctgtgacatccacc 167799


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,955,138
Number of Sequences: 3902068
Number of extensions: 3955138
Number of successful extensions: 82912
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 82818
Number of HSP's gapped (non-prelim): 95
length of query: 333
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 311
effective length of database: 17,147,199,772
effective search space: 5332779129092
effective search space used: 5332779129092
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)