ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl56d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, ... 299 4e-78
2gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full ... 139 8e-30
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 82 2e-12
4emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 82 2e-12
5gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 82 2e-12
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
7dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 2e-12
8ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA 76 1e-10
9gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds 74 4e-10
10gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRN... 72 2e-09
11gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full... 68 2e-08
12gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-... 68 2e-08
13gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, co... 62 1e-06
14ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA 60 6e-06
15ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA 60 6e-06
16gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 60 6e-06
17gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds 60 6e-06
18gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual posit... 60 6e-06
19gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds 60 6e-06
20dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
21dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
22dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
23dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
24gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequ... 56 9e-05
25gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partia... 48 0.022
26ref|XM_483279.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.087
27gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.087
28dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.087
29dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.087
30dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.087
31dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.087
32dbj|AK066825.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.087
33gb|AF095896.1|AF095896 Oryza sativa lipoxygenase (CM-LOX2) mRNA,... 46 0.087
34gb|AF095895.1|AF095895 Oryza sativa lipoxygenase (CM-LOX1) mRNA,... 46 0.087
35dbj|D14000.1|RICL2OP Oryza sativa (japonica cultivar-group) lox2... 46 0.087
36ref|XM_464447.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.34
37ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.34
38gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence 44 0.34
39gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 ge... 44 0.34
40gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 ge... 44 0.34
41gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 ge... 44 0.34
42gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 ge... 44 0.34
43gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 ge... 44 0.34
44gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 ge... 44 0.34
45gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 ge... 44 0.34
46gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 ge... 44 0.34
47gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 ge... 44 0.34
48gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 ge... 44 0.34
49gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 ge... 44 0.34
50gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 ge... 44 0.34
51gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 ge... 44 0.34
52gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 geno... 44 0.34
53dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
54gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 44 0.34
55gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complet... 44 0.34
56dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
57dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.34
58dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.34
59gb|AY111869.1| Zea mays CL452_-8 mRNA sequence 44 0.34
60gb|AY103567.1| Zea mays PCO116252 mRNA sequence 44 0.34
61emb|Z82288.2|CEZK896 Caenorhabditis elegans Cosmid ZK896, comple... 42 1.4
62emb|BX294385.17| Zebrafish DNA sequence from clone CH211-197E8 i... 42 1.4
63dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
64gb|AC022448.7| Homo sapiens chromosome 5 clone RP11-78G3, comple... 42 1.4
65dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
66ref|XM_779982.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.4
67gb|AF287229.1| Tetrahymena pyriformis heat shock protein 90 (HSP... 40 5.4
68gb|AY110522.1| Zea mays CL4677_2 mRNA sequence 40 5.4
69gb|AY104322.1| Zea mays PCO093659 mRNA sequence 40 5.4
70gb|AF151114.1|AF151114 Tetrahymena thermophila strain B2086 hsp8... 40 5.4 
>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds
          Length = 2910

 Score =  299 bits (151), Expect = 4e-78
 Identities = 157/159 (98%)
 Strand = Plus / Minus

                                                                        
Query: 244  agctagctccggtgtaagcaagcaaggatagcacaaaagcatgaggtctcgacgacggac 303
            ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 2727 agctagctccggtgtaagcaagcaaggatagcacaaaggcatgaggtctccacgacggac 2668

                                                                        
Query: 304  gtgctcagatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctg 363
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2667 gtgctcagatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctg 2608

                                                   
Query: 364  tcccgtgtggtcggaggtgtttgggtagagcagcatgta 402
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 2607 tcccgtgtggtcggaggtgtttgggtagagcagcatgta 2569



 Score =  270 bits (136), Expect = 3e-69
 Identities = 149/153 (97%), Gaps = 4/153 (2%)
 Strand = Plus / Minus

                                                                        
Query: 79   ttcattattgggcaaaacaagggattttttctgcacacgacgatgcattgaccggtagcc 138
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2896 ttcattattgggcaaaacaagggattttttctgcacacgacgatgcattgaccggtagcc 2837

                                                                        
Query: 139  agctgagctgagcttccgcatgccgatcagacccgtcgtgcacgcaccc----ttattgc 194
            |||||||||||||||||||||||||||||||||||||||||||||||||    |||||||
Sbjct: 2836 agctgagctgagcttccgcatgccgatcagacccgtcgtgcacgcacccttatttattgc 2777

                                             
Query: 195  cttaattattcatgcaccggcacaactctctgt 227
            |||||||||||||||||||||||||||||||||
Sbjct: 2776 cttaattattcatgcaccggcacaactctctgt 2744
to top
>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA
           sequence
          Length = 1129

 Score =  139 bits (70), Expect = 8e-30
 Identities = 85/90 (94%)
 Strand = Plus / Minus

                                                                       
Query: 313 tcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtg 372
           ||||||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 906 tcagatggagatgctgttggggatgcccctggccgtgagcccctcggcctggcccgtgtg 847

                                         
Query: 373 gtcggaggtgtttgggtagagcagcatgta 402
           |||||||||||| |||||||||||||||||
Sbjct: 846 gtcggaggtgttggggtagagcagcatgta 817



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 72   catcgacttcattattgggcaaaacaagggattttttctgcacacgacga 121
            ||||||||| |||||||||||||  |||||| |||||||| |||||||||
Sbjct: 1099 catcgactttattattgggcaaatgaagggaatttttctgtacacgacga 1050



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 42/46 (91%), Gaps = 1/46 (2%)
 Strand = Plus / Minus

                                                          
Query: 154  ccgcatgccgatcagacccgtcgtgcacgcac-ccttattgcctta 198
            ||||||||||||| |||||||||||||| ||| | |||||||||||
Sbjct: 1045 ccgcatgccgatcggacccgtcgtgcacacacgcattattgcctta 1000
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                            
Query: 310      agatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgt 369
                |||||||||||| |||||||| |||||||||||||||| ||| ||  | || |  ||| |
Sbjct: 30026452 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 30026393

                                                 
Query: 370      gtggtcggaggtgtttgggtagagcagcatgta 402
                | |||||||||||||||||||||||||| ||||
Sbjct: 30026392 gaggtcggaggtgtttgggtagagcagcgtgta 30026360



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                          
Query: 313      tcagatggatatgctgttcgggatgcccctggcggtgagccc 354
                ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 27821686 tcagatggagatgctgttggggatgcccatggcggtgagccc 27821645



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 373      gtcggaggtgtttgggtagagcagcatgta 402
                |||||||||||| ||||| |||||||||||
Sbjct: 27803047 gtcggaggtgttggggtaaagcagcatgta 27803018
to top
>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2
          Length = 2830

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                        
Query: 310  agatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgt 369
            |||||||||||| |||||||| |||||||||||||||| ||| ||  | || |  ||| |
Sbjct: 2698 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 2639

                                             
Query: 370  gtggtcggaggtgtttgggtagagcagcatgta 402
            | |||||||||||||||||||||||||| ||||
Sbjct: 2638 gaggtcggaggtgtttgggtagagcagcgtgta 2606
to top
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 80/93 (86%)
 Strand = Plus / Plus

                                                                         
Query: 310   agatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgt 369
             |||||||||||| |||||||| |||||||||||||||| ||| ||  | || |  ||| |
Sbjct: 81299 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 81358

                                              
Query: 370   gtggtcggaggtgtttgggtagagcagcatgta 402
             | |||||||||||||||||||||||||| ||||
Sbjct: 81359 gaggtcggaggtgtttgggtagagcagcgtgta 81391
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                            
Query: 310      agatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgt 369
                |||||||||||| |||||||| |||||||||||||||| ||| ||  | || |  ||| |
Sbjct: 30117874 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 30117815

                                                 
Query: 370      gtggtcggaggtgtttgggtagagcagcatgta 402
                | |||||||||||||||||||||||||| ||||
Sbjct: 30117814 gaggtcggaggtgtttgggtagagcagcgtgta 30117782



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                          
Query: 313      tcagatggatatgctgttcgggatgcccctggcggtgagccc 354
                ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 27913010 tcagatggagatgctgttggggatgcccatggcggtgagccc 27912969



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 373      gtcggaggtgtttgggtagagcagcatgta 402
                |||||||||||| ||||| |||||||||||
Sbjct: 27894371 gtcggaggtgttggggtaaagcagcatgta 27894342
to top
>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full
            insert sequence
          Length = 2928

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                        
Query: 310  agatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgt 369
            |||||||||||| |||||||| |||||||||||||||| ||| ||  | || |  ||| |
Sbjct: 2731 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 2672

                                             
Query: 370  gtggtcggaggtgtttgggtagagcagcatgta 402
            | |||||||||||||||||||||||||| ||||
Sbjct: 2671 gaggtcggaggtgtttgggtagagcagcgtgta 2639
to top
>ref|XM_469655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2613

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 77/90 (85%)
 Strand = Plus / Minus

                                                                        
Query: 313  tcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtg 372
            ||||||||| |||||||| |||||||||||||||| ||| ||  | || |  ||| || |
Sbjct: 2613 tcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgag 2554

                                          
Query: 373  gtcggaggtgtttgggtagagcagcatgta 402
            ||||||||||||||||||||||||| ||||
Sbjct: 2553 gtcggaggtgtttgggtagagcagcgtgta 2524
to top
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds
          Length = 2818

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                        
Query: 310  agatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgt 369
            |||| ||||||| |||||||| ||||||||| ||||||| |||||  | ||    ||| |
Sbjct: 2660 agattagatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgccctt 2601

                                             
Query: 370  gtggtcggaggtgtttgggtagagcagcatgta 402
            ||||||||||||||| |||||||||||||||||
Sbjct: 2600 gtggtcggaggtgttggggtagagcagcatgta 2568
to top
>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds
          Length = 1331

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/88 (85%)
 Strand = Plus / Minus

                                                                        
Query: 315  agatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtggt 374
            ||||||| |||||||| ||||||||| ||||||| |||||  | ||    ||| ||||||
Sbjct: 1084 agatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggt 1025

                                        
Query: 375  cggaggtgtttgggtagagcagcatgta 402
            |||||||||| |||||||||||||||||
Sbjct: 1024 cggaggtgttggggtagagcagcatgta 997
to top
>gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full insert mRNA
           sequence
          Length = 1020

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                       
Query: 313 tcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtg 372
           ||||||||| |||||||| ||||||||| | |||||||||||  ||||    ||| ||||
Sbjct: 753 tcagatggagatgctgttggggatgcccttagcggtgagcccggcggcggcgcccttgtg 694

                                         
Query: 373 gtcggaggtgtttgggtagagcagcatgta 402
            ||||||||||| |||||||||| ||||||
Sbjct: 693 atcggaggtgttggggtagagcaacatgta 664
to top
>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds
          Length = 2267

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                        
Query: 313  tcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtg 372
            ||||||||| |||||||| ||||||||| |||| ||||||||  ||||    ||  ||||
Sbjct: 2064 tcagatggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtg 2005

                                          
Query: 373  gtcggaggtgtttgggtagagcagcatgta 402
            ||| |||||||| |||||||||||||||||
Sbjct: 2004 gtcagaggtgttggggtagagcagcatgta 1975
to top
>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds
          Length = 3003

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                               
Query: 305  tgctcagatcagatggatatgctgttcgggatgcccctggcggtgagcccc 355
            ||||||| ||||||||| | |||||| ||||||||| ||||||||||||||
Sbjct: 2772 tgctcagctcagatggagacgctgttggggatgcccatggcggtgagcccc 2722
to top
>ref|XM_469412.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2686

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 313  tcagatggatatgctgttcgggatgcccctggcggtgagccc 354
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2446 tcagatggagatgctgttggggatgcccatggcggtgagccc 2405
to top
>ref|XM_469411.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3165

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 313  tcagatggatatgctgttcgggatgcccctggcggtgagccc 354
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2925 tcagatggagatgctgttggggatgcccatggcggtgagccc 2884
to top
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                       
Query: 313   tcagatggatatgctgttcgggatgcccctggcggtgagccc 354
             ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 65816 tcagatggagatgctgttggggatgcccatggcggtgagccc 65775



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 373   gtcggaggtgtttgggtagagcagcatgta 402
             |||||||||||| ||||| |||||||||||
Sbjct: 47177 gtcggaggtgttggggtaaagcagcatgta 47148
to top
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds
          Length = 5013

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 75/90 (83%)
 Strand = Plus / Minus

                                                                        
Query: 313  tcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtg 372
            ||||||||| |||||||| ||||||||| |||| ||||||||  ||||    ||  ||||
Sbjct: 4662 tcagatggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtg 4603

                                          
Query: 373  gtcggaggtgtttgggtagagcagcatgta 402
            ||| |||||||| || ||||||||||||||
Sbjct: 4602 gtcagaggtgttgggatagagcagcatgta 4573
to top
>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity
            lipoxygenase mRNA, complete cds
          Length = 3154

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 313  tcagatggatatgctgttcgggatgcccctggcggtgagccc 354
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2919 tcagatggagatgctgttggggatgcccatggcggtgagccc 2878
to top
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds
          Length = 2595

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 75/90 (83%)
 Strand = Plus / Minus

                                                                        
Query: 313  tcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtg 372
            ||||||||| |||||||| ||||||||| |||| ||||||||  ||||    ||  ||||
Sbjct: 2595 tcagatggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtg 2536

                                          
Query: 373  gtcggaggtgtttgggtagagcagcatgta 402
            ||| |||||||| || ||||||||||||||
Sbjct: 2535 gtcagaggtgttgggatagagcagcatgta 2506
to top
>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full
            insert sequence
          Length = 1560

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 313  tcagatggatatgctgttcgggatgcccctggcggtgagccc 354
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 1332 tcagatggagatgctgttggggatgcccatggcggtgagccc 1291
to top
>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full
            insert sequence
          Length = 2851

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 313  tcagatggatatgctgttcgggatgcccctggcggtgagccc 354
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2597 tcagatggagatgctgttggggatgcccatggcggtgagccc 2556
to top
>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full
            insert sequence
          Length = 3167

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 313  tcagatggatatgctgttcgggatgcccctggcggtgagccc 354
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 2927 tcagatggagatgctgttggggatgcccatggcggtgagccc 2886
to top
>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full
            insert sequence
          Length = 1726

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 313  tcagatggatatgctgttcgggatgcccctggcggtgagccc 354
            ||||||||| |||||||| ||||||||| |||||||||||||
Sbjct: 1497 tcagatggagatgctgttggggatgcccatggcggtgagccc 1456
to top
>gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequence
          Length = 934

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 67/80 (83%)
 Strand = Plus / Plus

                                                                       
Query: 323 atgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgtgtggtcggaggtg 382
           |||||||| ||||||||| |||||||||| ||  ||||    ||| |||||||  |||||
Sbjct: 1   atgctgttggggatgcccttggcggtgaggccggcggcggcacccttgtggtcttaggtg 60

                               
Query: 383 tttgggtagagcagcatgta 402
           || |||||||||||||||||
Sbjct: 61  ttagggtagagcagcatgta 80
to top
>gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partial cds
          Length = 1814

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 311  gatcagatggatatgctgttcgggatgcccctggcggtga 350
            ||||||||||| |||||||| ||||||||| |||| ||||
Sbjct: 1558 gatcagatggagatgctgttggggatgcccttggctgtga 1519
to top
>ref|XM_483279.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3198

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 312  atcagatggatatgctgttcgggatgcccctggcggtga 350
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2978 atcagatggatgtgctgttggggatgcccatgccggtga 2940
to top
>gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0615D12,
              complete sequence
          Length = 155402

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 186    ccttattgccttaattattcatg 208
              |||||||||||||||||||||||
Sbjct: 136193 ccttattgccttaattattcatg 136215



 Score = 46.1 bits (23), Expect = 0.087
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 186   ccttattgccttaattattcatg 208
             |||||||||||||||||||||||
Sbjct: 94214 ccttattgccttaattattcatg 94236
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                       
Query: 312      atcagatggatatgctgttcgggatgcccctggcggtga 350
                ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 25242576 atcagatggatgtgctgttggggatgcccatgccggtga 25242538



 Score = 46.1 bits (23), Expect = 0.087
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                       
Query: 312      atcagatggatatgctgttcgggatgcccctggcggtga 350
                ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 25209453 atcagatggatgtgctgttggggatgcccatgccggtga 25209491
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 186      ccttattgccttaattattcatg 208
                |||||||||||||||||||||||
Sbjct: 21745017 ccttattgccttaattattcatg 21745039



 Score = 46.1 bits (23), Expect = 0.087
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 186      ccttattgccttaattattcatg 208
                |||||||||||||||||||||||
Sbjct: 21703038 ccttattgccttaattattcatg 21703060
to top
>dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1168A08
          Length = 138135

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                     
Query: 312    atcagatggatatgctgttcgggatgcccctggcggtga 350
              ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 107699 atcagatggatgtgctgttggggatgcccatgccggtga 107661



 Score = 46.1 bits (23), Expect = 0.087
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 312   atcagatggatatgctgttcgggatgcccctggcggtga 350
             ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 74576 atcagatggatgtgctgttggggatgcccatgccggtga 74614
to top
>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0016N23
          Length = 147336

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 312   atcagatggatatgctgttcgggatgcccctggcggtga 350
             ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 17761 atcagatggatgtgctgttggggatgcccatgccggtga 17723
to top
>dbj|AK066825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075A10, full
            insert sequence
          Length = 3196

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 312  atcagatggatatgctgttcgggatgcccctggcggtga 350
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2976 atcagatggatgtgctgttggggatgcccatgccggtga 2938
to top
>gb|AF095896.1|AF095896 Oryza sativa lipoxygenase (CM-LOX2) mRNA, partial cds
          Length = 2232

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 312  atcagatggatatgctgttcgggatgcccctggcggtga 350
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2053 atcagatggatgtgctgttggggatgcccatgccggtga 2015
to top
>gb|AF095895.1|AF095895 Oryza sativa lipoxygenase (CM-LOX1) mRNA, partial cds
          Length = 2664

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 312  atcagatggatatgctgttcgggatgcccctggcggtga 350
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2461 atcagatggatgtgctgttggggatgcccatgccggtga 2423
to top
>dbj|D14000.1|RICL2OP Oryza sativa (japonica cultivar-group) lox2osPil mRNA for
            lipoxygenase, complete cds
          Length = 3007

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 312  atcagatggatatgctgttcgggatgcccctggcggtga 350
            ||||||||||| ||||||| ||||||||| || ||||||
Sbjct: 2891 atcagatggatgtgctgttggggatgcccatgccggtga 2853
to top
>ref|XM_464447.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3123

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 313  tcagatggatatgctgttcgggatgcccct 342
            ||||||||| |||||||| |||||||||||
Sbjct: 2881 tcagatggagatgctgtttgggatgcccct 2852
to top
>ref|XM_469409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2601

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 373  gtcggaggtgtttgggtagagcagcatgta 402
            |||||||||||| ||||| |||||||||||
Sbjct: 2541 gtcggaggtgttggggtaaagcagcatgta 2512
to top
>gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence
          Length = 810

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 373 gtcggaggtgtttgggtagagcagcatgta 402
           |||||||||||| |||||||||||| ||||
Sbjct: 736 gtcggaggtgttggggtagagcagcgtgta 707
to top
>gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 genomic sequence
          Length = 805

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 373 gtcggaggtgtttgggtagagcagcatgta 402
           |||||||||||| |||||||||||| ||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgta 702
to top
>gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 genomic sequence
          Length = 805

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 373 gtcggaggtgtttgggtagagcagcatgta 402
           |||||||||||| |||||||||||| ||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgta 702
to top
>gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 genomic sequence
          Length = 805

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 373 gtcggaggtgtttgggtagagcagcatgta 402
           |||||||||||| |||||||||||| ||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgta 702
to top
>gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 genomic sequence
          Length = 805

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 373 gtcggaggtgtttgggtagagcagcatgta 402
           |||||||||||| |||||||||||| ||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgta 702
to top
>gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 genomic sequence
          Length = 805

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 373 gtcggaggtgtttgggtagagcagcatgta 402
           |||||||||||| |||||||||||| ||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgta 702
to top
>gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 genomic sequence
          Length = 805

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 373 gtcggaggtgtttgggtagagcagcatgta 402
           |||||||||||| |||||||||||| ||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgta 702
to top
>gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 genomic sequence
          Length = 805

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 373 gtcggaggtgtttgggtagagcagcatgta 402
           |||||||||||| |||||||||||| ||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgta 702
to top
>gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 genomic sequence
          Length = 805

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 373 gtcggaggtgtttgggtagagcagcatgta 402
           |||||||||||| |||||||||||| ||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgta 702
to top
>gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 genomic sequence
          Length = 805

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 373 gtcggaggtgtttgggtagagcagcatgta 402
           |||||||||||| |||||||||||| ||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgta 702
to top
>gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 genomic sequence
          Length = 805

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 373 gtcggaggtgtttgggtagagcagcatgta 402
           |||||||||||| |||||||||||| ||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgta 702
to top
>gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 genomic sequence
          Length = 805

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 373 gtcggaggtgtttgggtagagcagcatgta 402
           |||||||||||| |||||||||||| ||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgta 702
to top
>gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 genomic sequence
          Length = 805

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 373 gtcggaggtgtttgggtagagcagcatgta 402
           |||||||||||| |||||||||||| ||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgta 702
to top
>gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 genomic sequence
          Length = 805

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 373 gtcggaggtgtttgggtagagcagcatgta 402
           |||||||||||| |||||||||||| ||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgta 702
to top
>gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 genomic sequence
          Length = 805

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 373 gtcggaggtgtttgggtagagcagcatgta 402
           |||||||||||| |||||||||||| ||||
Sbjct: 731 gtcggaggtgttggggtagagcagcgtgta 702
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 313     tcagatggatatgctgttcgggatgcccct 342
               ||||||||| |||||||| |||||||||||
Sbjct: 5276963 tcagatggagatgctgtttgggatgcccct 5276992
to top
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 373   gtcggaggtgtttgggtagagcagcatgta 402
             |||||||||||| ||||| |||||||||||
Sbjct: 10846 gtcggaggtgttggggtaaagcagcatgta 10875
to top
>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds
          Length = 2845

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 373  gtcggaggtgtttgggtagagcagcatgta 402
            |||||||||||| |||||||||||| ||||
Sbjct: 2562 gtcggaggtgttggggtagagcagcgtgta 2533
to top
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1225_F07
          Length = 142772

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 313  tcagatggatatgctgttcgggatgcccct 342
            ||||||||| |||||||| |||||||||||
Sbjct: 3266 tcagatggagatgctgtttgggatgcccct 3295
to top
>dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074B03, full
            insert sequence
          Length = 3160

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 313  tcagatggatatgctgttcgggatgcccct 342
            ||||||||| |||||||| |||||||||||
Sbjct: 2880 tcagatggagatgctgtttgggatgcccct 2851
to top
>dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B01, full
            insert sequence
          Length = 2250

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 313  tcagatggatatgctgttcgggatgcccct 342
            ||||||||| |||||||| |||||||||||
Sbjct: 2042 tcagatggagatgctgtttgggatgcccct 2013
to top
>gb|AY111869.1| Zea mays CL452_-8 mRNA sequence
          Length = 568

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 317 atggatatgctgttcgggatgcccctggcggtgagcccctcg 358
           ||||| |||||||| || |||||| |||| ||||||||||||
Sbjct: 363 atggagatgctgttgggaatgcccatggcagtgagcccctcg 322
to top
>gb|AY103567.1| Zea mays PCO116252 mRNA sequence
          Length = 3135

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 317  atggatatgctgttcgggatgcccctggcggtgagcccctcggcct 362
            ||||| |||||||| || |||||| |||| || |||||||||||||
Sbjct: 2896 atggagatgctgttgggaatgcccatggcagtaagcccctcggcct 2851
to top
>emb|Z82288.2|CEZK896 Caenorhabditis elegans Cosmid ZK896, complete sequence
          Length = 37711

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 93    aaacaagggattttttctgca 113
             |||||||||||||||||||||
Sbjct: 32565 aaacaagggattttttctgca 32585
to top
>emb|BX294385.17| Zebrafish DNA sequence from clone CH211-197E8 in linkage group 24,
             complete sequence
          Length = 155584

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 90    gcaaaacaagggattttttct 110
             |||||||||||||||||||||
Sbjct: 39634 gcaaaacaagggattttttct 39614
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 25       ttgccaagaagaagaaaaaca 45
                |||||||||||||||||||||
Sbjct: 35171480 ttgccaagaagaagaaaaaca 35171500
to top
>gb|AC022448.7| Homo sapiens chromosome 5 clone RP11-78G3, complete sequence
          Length = 111000

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 23    gtttgccaagaagaagaaaaa 43
             |||||||||||||||||||||
Sbjct: 26186 gtttgccaagaagaagaaaaa 26206
to top
>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0031D02
          Length = 183692

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 25    ttgccaagaagaagaaaaaca 45
             |||||||||||||||||||||
Sbjct: 50564 ttgccaagaagaagaaaaaca 50584
to top
>ref|XM_779982.1| PREDICTED: Strongylocentrotus purpuratus similar to periostin
            (LOC579890), mRNA
          Length = 1542

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 56   ggagggaacatcacaccatc 75
            ||||||||||||||||||||
Sbjct: 1457 ggagggaacatcacaccatc 1438
to top
>gb|AF287229.1| Tetrahymena pyriformis heat shock protein 90 (HSP81) gene, partial
           cds
          Length = 2283

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 28  ccaagaagaagaaaaacaac 47
           ||||||||||||||||||||
Sbjct: 979 ccaagaagaagaaaaacaac 998
to top
>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence
          Length = 1304

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 311 gatcagatggatatgctgttcgggatgcccct 342
           ||||||||||| |||||| | |||||||||||
Sbjct: 132 gatcagatggagatgctgctggggatgcccct 163
to top
>gb|AY104322.1| Zea mays PCO093659 mRNA sequence
          Length = 1439

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 311  gatcagatggatatgctgttcgggatgcccct 342
            ||||||||||| |||||| | |||||||||||
Sbjct: 1216 gatcagatggagatgctgctggggatgcccct 1185
to top
>gb|AF151114.1|AF151114 Tetrahymena thermophila strain B2086 hsp82 heat shock protein
           (HSP82) mRNA, partial cds
          Length = 2243

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 28  ccaagaagaagaaaaacaac 47
           ||||||||||||||||||||
Sbjct: 974 ccaagaagaagaaaaacaac 993


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,806,937
Number of Sequences: 3902068
Number of extensions: 3806937
Number of successful extensions: 93721
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93394
Number of HSP's gapped (non-prelim): 325
length of query: 402
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 380
effective length of database: 17,147,199,772
effective search space: 6515935913360
effective search space used: 6515935913360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top